Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055149.t1 | XP_003623196.1 | 88.8 | 224 | 13 | 1 | 1 | 212 | 1 | 224 | 7.30E-106 | 393.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055149.t1 | P32110 | 67.6 | 225 | 60 | 2 | 1 | 212 | 1 | 225 | 3.4e-80 | 299.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055149.t1 | G7L6H0 | 88.8 | 224 | 13 | 1 | 1 | 212 | 1 | 224 | 5.2e-106 | 393.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053094 | MS.gene055149 | 0.816884 | 4.39E-52 | -1.69E-46 |
| MS.gene053963 | MS.gene055149 | 0.825622 | 4.24E-54 | -1.69E-46 |
| MS.gene054892 | MS.gene055149 | 0.815398 | 9.44E-52 | -1.69E-46 |
| MS.gene054893 | MS.gene055149 | 0.818779 | 1.64E-52 | -1.69E-46 |
| MS.gene055147 | MS.gene055149 | 0.870298 | 1.62E-66 | -1.69E-46 |
| MS.gene055148 | MS.gene055149 | 0.869184 | 3.74E-66 | -1.69E-46 |
| MS.gene055149 | MS.gene05952 | 0.807772 | 4.29E-50 | -1.69E-46 |
| MS.gene055149 | MS.gene062327 | 0.804098 | 2.54E-49 | -1.69E-46 |
| MS.gene055149 | MS.gene064415 | 0.803634 | 3.17E-49 | -1.69E-46 |
| MS.gene055149 | MS.gene065460 | 0.807095 | 5.98E-50 | -1.69E-46 |
| MS.gene055149 | MS.gene065886 | 0.839882 | 1.21E-57 | -1.69E-46 |
| MS.gene055149 | MS.gene066513 | 0.831092 | 2.03E-55 | -1.69E-46 |
| MS.gene055149 | MS.gene074100 | 0.808606 | 2.85E-50 | -1.69E-46 |
| MS.gene055149 | MS.gene20481 | 0.804478 | 2.12E-49 | -1.69E-46 |
| MS.gene055149 | MS.gene20608 | 0.831016 | 2.12E-55 | -1.69E-46 |
| MS.gene055149 | MS.gene29036 | 0.825649 | 4.18E-54 | -1.69E-46 |
| MS.gene055149 | MS.gene29096 | 0.821019 | 5.04E-53 | -1.69E-46 |
| MS.gene055149 | MS.gene30878 | 0.812676 | 3.76E-51 | -1.69E-46 |
| MS.gene055149 | MS.gene31551 | 0.808648 | 2.79E-50 | -1.69E-46 |
| MS.gene055149 | MS.gene32409 | 0.828232 | 1.01E-54 | -1.69E-46 |
| MS.gene055149 | MS.gene32411 | 0.812556 | 4.00E-51 | -1.69E-46 |
| MS.gene055149 | MS.gene32801 | 0.832076 | 1.16E-55 | -1.69E-46 |
| MS.gene055149 | MS.gene34340 | 0.802999 | 4.30E-49 | -1.69E-46 |
| MS.gene055149 | MS.gene34444 | 0.814221 | 1.72E-51 | -1.69E-46 |
| MS.gene055149 | MS.gene36977 | 0.805369 | 1.38E-49 | -1.69E-46 |
| MS.gene055149 | MS.gene37412 | 0.814913 | 1.21E-51 | -1.69E-46 |
| MS.gene055149 | MS.gene39295 | 0.804237 | 2.38E-49 | -1.69E-46 |
| MS.gene055149 | MS.gene43381 | 0.814745 | 1.32E-51 | -1.69E-46 |
| MS.gene055149 | MS.gene44909 | 0.827765 | 1.31E-54 | -1.69E-46 |
| MS.gene055149 | MS.gene46053 | 0.853543 | 2.23E-61 | -1.69E-46 |
| MS.gene055149 | MS.gene46054 | 0.844107 | 9.28E-59 | -1.69E-46 |
| MS.gene055149 | MS.gene47195 | 0.802816 | 4.69E-49 | -1.69E-46 |
| MS.gene055149 | MS.gene57128 | 0.806023 | 1.01E-49 | -1.69E-46 |
| MS.gene055149 | MS.gene62676 | 0.808991 | 2.36E-50 | -1.69E-46 |
| MS.gene055149 | MS.gene62677 | 0.82423 | 9.03E-54 | -1.69E-46 |
| MS.gene055149 | MS.gene70742 | 0.813927 | 2.00E-51 | -1.69E-46 |
| MS.gene055149 | MS.gene71568 | 0.802398 | 5.72E-49 | -1.69E-46 |
| MS.gene055149 | MS.gene72620 | 0.810058 | 1.39E-50 | -1.69E-46 |
| MS.gene055149 | MS.gene73236 | 0.812483 | 4.15E-51 | -1.69E-46 |
| MS.gene055149 | MS.gene74530 | 0.801265 | 9.77E-49 | -1.69E-46 |
| MS.gene055149 | MS.gene78773 | 0.817314 | 3.52E-52 | -1.69E-46 |
| MS.gene055149 | MS.gene80821 | 0.809707 | 1.66E-50 | -1.69E-46 |
| MS.gene055149 | MS.gene83022 | 0.800353 | 1.50E-48 | -1.69E-46 |
| MS.gene055149 | MS.gene83687 | 0.80089 | 1.17E-48 | -1.69E-46 |
| MS.gene055149 | MS.gene83853 | 0.808663 | 2.77E-50 | -1.69E-46 |
| MS.gene055149 | MS.gene88351 | 0.818748 | 1.67E-52 | -1.69E-46 |
| MS.gene055149 | MS.gene89254 | 0.873629 | 1.27E-67 | -1.69E-46 |
| MS.gene055149 | MS.gene89255 | 0.851348 | 9.41E-61 | -1.69E-46 |
| MS.gene055149 | MS.gene94111 | 0.817047 | 4.04E-52 | -1.69E-46 |
| MS.gene055149 | MS.gene94267 | 0.852383 | 4.79E-61 | -1.69E-46 |
| MS.gene055149 | MS.gene94268 | 0.873686 | 1.21E-67 | -1.69E-46 |
| MS.gene055149 | MS.gene96973 | 0.823976 | 1.04E-53 | -1.69E-46 |
| MS.gene055149 | MS.gene99534 | 0.815365 | 9.60E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055149.t1 | MTR_7g065600 | 88.839 | 224 | 13 | 1 | 1 | 212 | 1 | 224 | 5.45e-145 | 403 |
| MS.gene055149.t1 | MTR_7g065590 | 75.000 | 224 | 44 | 1 | 1 | 212 | 1 | 224 | 2.40e-123 | 348 |
| MS.gene055149.t1 | MTR_7g065290 | 73.661 | 224 | 47 | 1 | 1 | 212 | 1 | 224 | 5.27e-120 | 340 |
| MS.gene055149.t1 | MTR_7g065230 | 72.321 | 224 | 45 | 2 | 1 | 212 | 1 | 219 | 1.53e-113 | 323 |
| MS.gene055149.t1 | MTR_7g065265 | 70.089 | 224 | 55 | 1 | 1 | 212 | 1 | 224 | 1.88e-113 | 323 |
| MS.gene055149.t1 | MTR_7g065270 | 69.196 | 224 | 57 | 1 | 1 | 212 | 1 | 224 | 5.67e-112 | 319 |
| MS.gene055149.t1 | MTR_7g065260 | 75.000 | 212 | 51 | 1 | 1 | 210 | 8 | 219 | 2.93e-106 | 305 |
| MS.gene055149.t1 | MTR_7g065720 | 65.333 | 225 | 65 | 2 | 1 | 212 | 1 | 225 | 8.07e-104 | 299 |
| MS.gene055149.t1 | MTR_7g065660 | 63.677 | 223 | 69 | 1 | 1 | 211 | 1 | 223 | 3.45e-102 | 295 |
| MS.gene055149.t1 | MTR_7g065740 | 61.607 | 224 | 73 | 2 | 1 | 211 | 1 | 224 | 2.70e-100 | 290 |
| MS.gene055149.t1 | MTR_7g065630 | 64.574 | 223 | 63 | 2 | 1 | 211 | 19 | 237 | 1.63e-99 | 288 |
| MS.gene055149.t1 | MTR_7g065750 | 61.607 | 224 | 73 | 2 | 1 | 211 | 1 | 224 | 7.13e-97 | 281 |
| MS.gene055149.t1 | MTR_4g019790 | 62.189 | 201 | 76 | 0 | 1 | 201 | 1 | 201 | 2.40e-92 | 270 |
| MS.gene055149.t1 | MTR_7g065710 | 65.979 | 194 | 62 | 1 | 8 | 201 | 5 | 194 | 2.75e-91 | 267 |
| MS.gene055149.t1 | MTR_7g065640 | 58.296 | 223 | 63 | 2 | 1 | 211 | 1 | 205 | 2.97e-89 | 261 |
| MS.gene055149.t1 | MTR_4g019780 | 62.000 | 200 | 74 | 2 | 3 | 201 | 4 | 202 | 2.12e-86 | 254 |
| MS.gene055149.t1 | MTR_7g065680 | 67.662 | 201 | 61 | 1 | 1 | 201 | 1 | 197 | 2.48e-85 | 252 |
| MS.gene055149.t1 | MTR_7g065700 | 65.672 | 201 | 65 | 1 | 1 | 201 | 1 | 197 | 2.42e-83 | 247 |
| MS.gene055149.t1 | MTR_6g080440 | 48.718 | 195 | 98 | 2 | 8 | 201 | 4 | 197 | 2.02e-60 | 189 |
| MS.gene055149.t1 | MTR_3g099757 | 51.010 | 198 | 95 | 2 | 5 | 201 | 3 | 199 | 3.93e-60 | 188 |
| MS.gene055149.t1 | MTR_1g090150 | 44.444 | 207 | 110 | 3 | 6 | 209 | 2 | 206 | 3.14e-57 | 181 |
| MS.gene055149.t1 | MTR_1g115195 | 47.208 | 197 | 101 | 2 | 7 | 200 | 3 | 199 | 1.77e-56 | 179 |
| MS.gene055149.t1 | MTR_8g087425 | 46.734 | 199 | 104 | 2 | 4 | 201 | 2 | 199 | 1.86e-54 | 173 |
| MS.gene055149.t1 | MTR_8g087410 | 46.040 | 202 | 106 | 3 | 1 | 201 | 1 | 200 | 2.30e-54 | 173 |
| MS.gene055149.t1 | MTR_5g037380 | 44.231 | 208 | 106 | 4 | 1 | 200 | 1 | 206 | 7.18e-51 | 164 |
| MS.gene055149.t1 | MTR_5g040430 | 40.865 | 208 | 115 | 3 | 1 | 201 | 1 | 207 | 1.14e-50 | 164 |
| MS.gene055149.t1 | MTR_1g090070 | 43.069 | 202 | 106 | 4 | 8 | 203 | 10 | 208 | 9.34e-50 | 162 |
| MS.gene055149.t1 | MTR_1g090100 | 44.162 | 197 | 104 | 4 | 8 | 200 | 3 | 197 | 8.30e-49 | 159 |
| MS.gene055149.t1 | MTR_8g061950 | 44.118 | 204 | 106 | 4 | 5 | 200 | 3 | 206 | 8.48e-49 | 159 |
| MS.gene055149.t1 | MTR_1g090060 | 42.929 | 198 | 107 | 4 | 8 | 201 | 4 | 199 | 6.55e-48 | 157 |
| MS.gene055149.t1 | MTR_1g090090 | 41.000 | 200 | 112 | 4 | 8 | 203 | 4 | 201 | 8.28e-46 | 151 |
| MS.gene055149.t1 | MTR_4g059730 | 37.799 | 209 | 125 | 3 | 6 | 210 | 3 | 210 | 3.96e-45 | 149 |
| MS.gene055149.t1 | MTR_2g070200 | 41.711 | 187 | 105 | 3 | 6 | 190 | 3 | 187 | 2.11e-42 | 142 |
| MS.gene055149.t1 | MTR_2g070150 | 39.894 | 188 | 108 | 4 | 6 | 191 | 3 | 187 | 1.08e-40 | 137 |
| MS.gene055149.t1 | MTR_3g467420 | 42.781 | 187 | 102 | 4 | 7 | 191 | 9 | 192 | 2.70e-40 | 137 |
| MS.gene055149.t1 | MTR_4g124130 | 42.708 | 192 | 100 | 6 | 5 | 191 | 2 | 188 | 5.46e-39 | 134 |
| MS.gene055149.t1 | MTR_2g070180 | 38.830 | 188 | 110 | 4 | 6 | 191 | 3 | 187 | 7.83e-39 | 133 |
| MS.gene055149.t1 | MTR_2g070130 | 39.037 | 187 | 109 | 4 | 6 | 190 | 3 | 186 | 1.42e-38 | 132 |
| MS.gene055149.t1 | MTR_2g070140 | 40.462 | 173 | 98 | 4 | 21 | 191 | 2 | 171 | 1.14e-37 | 130 |
| MS.gene055149.t1 | MTR_3g467430 | 40.526 | 190 | 108 | 4 | 4 | 191 | 6 | 192 | 9.26e-37 | 128 |
| MS.gene055149.t1 | MTR_8g056940 | 41.579 | 190 | 104 | 5 | 6 | 192 | 3 | 188 | 1.11e-36 | 128 |
| MS.gene055149.t1 | MTR_5g076900 | 39.153 | 189 | 110 | 4 | 3 | 189 | 2 | 187 | 4.67e-36 | 126 |
| MS.gene055149.t1 | MTR_2g070120 | 38.830 | 188 | 110 | 4 | 6 | 191 | 3 | 187 | 5.10e-36 | 126 |
| MS.gene055149.t1 | MTR_2g070210 | 39.474 | 190 | 108 | 5 | 6 | 191 | 3 | 189 | 6.52e-36 | 126 |
| MS.gene055149.t1 | MTR_2g070070 | 39.247 | 186 | 108 | 4 | 8 | 191 | 5 | 187 | 2.21e-34 | 122 |
| MS.gene055149.t1 | MTR_2g070060 | 38.172 | 186 | 110 | 4 | 8 | 191 | 5 | 187 | 2.78e-33 | 119 |
| MS.gene055149.t1 | MTR_0186s0030 | 46.512 | 129 | 65 | 3 | 16 | 142 | 13 | 139 | 6.31e-29 | 105 |
| MS.gene055149.t1 | MTR_2g070110 | 38.587 | 184 | 107 | 4 | 8 | 189 | 5 | 184 | 2.58e-28 | 106 |
| MS.gene055149.t1 | MTR_2g072120 | 43.077 | 65 | 36 | 1 | 51 | 114 | 2 | 66 | 2.43e-14 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055149.t1 | AT3G09270 | 51.980 | 202 | 93 | 4 | 3 | 201 | 2 | 202 | 7.59e-69 | 210 |
| MS.gene055149.t1 | AT2G29420 | 50.251 | 199 | 97 | 2 | 3 | 200 | 5 | 202 | 9.60e-68 | 207 |
| MS.gene055149.t1 | AT2G29490 | 49.744 | 195 | 95 | 3 | 1 | 193 | 1 | 194 | 3.26e-58 | 183 |
| MS.gene055149.t1 | AT2G29450 | 46.269 | 201 | 106 | 2 | 3 | 201 | 2 | 202 | 1.41e-54 | 174 |
| MS.gene055149.t1 | AT2G29480 | 45.320 | 203 | 108 | 3 | 1 | 201 | 1 | 202 | 4.53e-53 | 170 |
| MS.gene055149.t1 | AT2G29460 | 45.813 | 203 | 107 | 3 | 1 | 201 | 1 | 202 | 1.12e-52 | 169 |
| MS.gene055149.t1 | AT2G29440 | 45.320 | 203 | 107 | 4 | 1 | 201 | 1 | 201 | 5.35e-52 | 167 |
| MS.gene055149.t1 | AT2G29470 | 44.608 | 204 | 109 | 4 | 1 | 201 | 1 | 203 | 5.93e-52 | 167 |
| MS.gene055149.t1 | AT1G10370 | 45.411 | 207 | 104 | 4 | 1 | 200 | 1 | 205 | 1.39e-51 | 166 |
| MS.gene055149.t1 | AT1G59700 | 46.860 | 207 | 102 | 4 | 5 | 203 | 4 | 210 | 3.60e-49 | 160 |
| MS.gene055149.t1 | AT1G69930 | 41.463 | 205 | 114 | 3 | 2 | 200 | 7 | 211 | 2.13e-48 | 158 |
| MS.gene055149.t1 | AT1G10360 | 41.584 | 202 | 111 | 3 | 6 | 200 | 4 | 205 | 5.48e-48 | 157 |
| MS.gene055149.t1 | AT1G59670 | 44.390 | 205 | 106 | 4 | 5 | 201 | 4 | 208 | 2.29e-47 | 155 |
| MS.gene055149.t1 | AT1G27130 | 42.584 | 209 | 109 | 6 | 1 | 200 | 1 | 207 | 8.04e-47 | 154 |
| MS.gene055149.t1 | AT1G27140 | 40.670 | 209 | 114 | 5 | 1 | 200 | 1 | 208 | 2.52e-43 | 145 |
| MS.gene055149.t1 | AT1G69920 | 39.048 | 210 | 118 | 4 | 1 | 200 | 26 | 235 | 4.74e-42 | 142 |
| MS.gene055149.t1 | AT5G62480 | 38.889 | 216 | 120 | 4 | 5 | 209 | 6 | 220 | 5.66e-42 | 142 |
| MS.gene055149.t1 | AT1G78320 | 42.328 | 189 | 104 | 4 | 5 | 191 | 2 | 187 | 7.77e-42 | 141 |
| MS.gene055149.t1 | AT1G78380 | 43.478 | 184 | 99 | 4 | 8 | 189 | 5 | 185 | 8.70e-42 | 141 |
| MS.gene055149.t1 | AT1G78340 | 44.828 | 174 | 93 | 3 | 6 | 177 | 3 | 175 | 1.32e-41 | 140 |
| MS.gene055149.t1 | AT1G17170 | 42.553 | 188 | 102 | 5 | 6 | 191 | 3 | 186 | 5.28e-40 | 136 |
| MS.gene055149.t1 | AT1G53680 | 40.206 | 194 | 111 | 4 | 1 | 191 | 1 | 192 | 2.22e-39 | 135 |
| MS.gene055149.t1 | AT1G78370 | 41.848 | 184 | 102 | 4 | 10 | 191 | 7 | 187 | 4.25e-39 | 134 |
| MS.gene055149.t1 | AT1G74590 | 35.266 | 207 | 127 | 3 | 1 | 201 | 1 | 206 | 6.50e-39 | 134 |
| MS.gene055149.t1 | AT1G17180 | 39.894 | 188 | 108 | 4 | 6 | 191 | 3 | 187 | 7.87e-37 | 128 |
| MS.gene055149.t1 | AT1G17190 | 40.415 | 193 | 108 | 5 | 1 | 191 | 1 | 188 | 1.07e-36 | 128 |
| MS.gene055149.t1 | AT1G78360 | 43.353 | 173 | 94 | 4 | 8 | 177 | 5 | 176 | 5.48e-36 | 126 |
| MS.gene055149.t1 | AT3G43800 | 35.644 | 202 | 121 | 6 | 4 | 199 | 2 | 200 | 8.95e-34 | 120 |
| MS.gene055149.t1 | AT1G78320 | 35.106 | 188 | 92 | 4 | 5 | 191 | 2 | 160 | 6.70e-26 | 99.4 |
| MS.gene055149.t1 | AT5G62480 | 31.163 | 215 | 112 | 4 | 5 | 209 | 6 | 194 | 3.72e-25 | 98.2 |
| MS.gene055149.t1 | AT5G62480 | 31.163 | 215 | 111 | 4 | 5 | 209 | 6 | 193 | 8.94e-25 | 97.1 |
| MS.gene055149.t1 | AT2G02380 | 30.144 | 209 | 127 | 6 | 5 | 201 | 9 | 210 | 4.29e-18 | 79.7 |
| MS.gene055149.t1 | AT2G02390 | 28.910 | 211 | 131 | 5 | 3 | 201 | 4 | 207 | 4.07e-17 | 77.0 |
| MS.gene055149.t1 | AT2G02390 | 30.435 | 184 | 109 | 5 | 3 | 174 | 4 | 180 | 5.17e-15 | 70.9 |
| MS.gene055149.t1 | AT2G02390 | 27.982 | 218 | 131 | 6 | 3 | 201 | 4 | 214 | 1.17e-14 | 70.5 |
Find 41 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGCCTTGGCTCGTTTC+TGG | 0.120947 | 7.4:+39388431 | MS.gene055149:CDS |
| ACAGGAACTTTCTTATAAAC+AGG | 0.283283 | 7.4:-39388307 | None:intergenic |
| TAAGGATCAGAAGGCAATAT+TGG | 0.299422 | 7.4:-39388406 | None:intergenic |
| AATCACAAGGGATTCTGATA+TGG | 0.318787 | 7.4:-39388350 | None:intergenic |
| GAGCTCAAAGGAAAATTCTT+TGG | 0.320303 | 7.4:+39390894 | MS.gene055149:CDS |
| TTCTTTGGTGGAGAGGAGAT+TGG | 0.373411 | 7.4:+39390909 | MS.gene055149:CDS |
| TTGACTCCATTTGTAAAGCT+TGG | 0.384299 | 7.4:-39391024 | None:intergenic |
| CACCAACCATCCAGTTGTTA+AGG | 0.388600 | 7.4:+39391052 | MS.gene055149:CDS |
| CGCTAAGATGGCATCAAATC+AGG | 0.389304 | 7.4:+39388147 | None:intergenic |
| TGACTCCATTTGTAAAGCTT+GGG | 0.390868 | 7.4:-39391023 | None:intergenic |
| CGAGCTTTATCCTTAACAAC+TGG | 0.421334 | 7.4:-39391062 | None:intergenic |
| GACCAAGTTCATAGATGATA+AGG | 0.434027 | 7.4:+39388453 | MS.gene055149:CDS |
| GTTTGTTGCTTCTTGTACGA+TGG | 0.459262 | 7.4:-39390973 | None:intergenic |
| GGAGATTGCTCTAACATTGA+AGG | 0.460355 | 7.4:+39388219 | MS.gene055149:CDS |
| AATTTCCCAAGCTTTACAAA+TGG | 0.474830 | 7.4:+39391018 | MS.gene055149:CDS |
| TACCTTATCATCTATGAACT+TGG | 0.479710 | 7.4:-39388455 | None:intergenic |
| ATCCTTAACAACTGGATGGT+TGG | 0.486493 | 7.4:-39391054 | None:intergenic |
| ATCACAAGGGATTCTGATAT+GGG | 0.494154 | 7.4:-39388349 | None:intergenic |
| TTTGTTGCTTCTTGTACGAT+GGG | 0.494757 | 7.4:-39390972 | None:intergenic |
| ATCTCCACCCTACTCACAAA+TGG | 0.497901 | 7.4:-39388202 | None:intergenic |
| CAATATCAGTTAGAAAAGGC+AGG | 0.504225 | 7.4:+39388253 | MS.gene055149:CDS |
| ATATCATTATGAACTAATAC+AGG | 0.508270 | 7.4:-39388325 | None:intergenic |
| CTCAAAGGAAAATTCTTTGG+TGG | 0.514503 | 7.4:+39390897 | MS.gene055149:CDS |
| GGCAAGTCCATTTGTGAGTA+GGG | 0.523330 | 7.4:+39388195 | MS.gene055149:CDS |
| AGGAAAATTCTTTGGTGGAG+AGG | 0.523741 | 7.4:+39390902 | MS.gene055149:CDS |
| AGAACGTGAGAAAGCTATTG+AGG | 0.524222 | 7.4:+39390839 | MS.gene055149:CDS |
| CTTTATCCTTAACAACTGGA+TGG | 0.536738 | 7.4:-39391058 | None:intergenic |
| ATACCAATATCAGTTAGAAA+AGG | 0.539142 | 7.4:+39388249 | MS.gene055149:CDS |
| TGATCCTTACAAAAGAGCCT+TGG | 0.548089 | 7.4:+39388420 | MS.gene055149:CDS |
| TTGAGTATGTCGATGAGACC+TGG | 0.549849 | 7.4:+39388374 | MS.gene055149:CDS |
| CAGGAACTTTCTTATAAACA+GGG | 0.564477 | 7.4:-39388306 | None:intergenic |
| AATATCAGTTAGAAAAGGCA+GGG | 0.582241 | 7.4:+39388254 | MS.gene055149:CDS |
| ATTCTTGAGAATGAGCTCAA+AGG | 0.591101 | 7.4:+39390882 | MS.gene055149:CDS |
| GAGATTGCTCTAACATTGAA+GGG | 0.597295 | 7.4:+39388220 | MS.gene055149:CDS |
| ACCAGTGTTTAAGTGCTGCA+CGG | 0.603673 | 7.4:+39390790 | MS.gene055149:intron |
| CGACATACTCAAGAATCACA+AGG | 0.607291 | 7.4:-39388363 | None:intergenic |
| TGGCAAGTCCATTTGTGAGT+AGG | 0.615908 | 7.4:+39388194 | MS.gene055149:CDS |
| TTGTTGCTTCTTGTACGATG+GGG | 0.658880 | 7.4:-39390971 | None:intergenic |
| CTTGGTCCAGAAACGAGCCA+AGG | 0.682377 | 7.4:-39388437 | None:intergenic |
| AAGTCCATTTGTGAGTAGGG+TGG | 0.696953 | 7.4:+39388198 | MS.gene055149:CDS |
| GACATACTCAAGAATCACAA+GGG | 0.702786 | 7.4:-39388362 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTTAAAAAAAAATTATATG+TGG | - | chr7.4:39388837-39388856 | None:intergenic | 10.0% |
| !! | TAGCTAAATATATATTATTA+GGG | + | chr7.4:39389959-39389978 | MS.gene055149:intron | 10.0% |
| !!! | TAGTTTTCATTTTTAAATTA+CGG | + | chr7.4:39390167-39390186 | MS.gene055149:intron | 10.0% |
| !!! | TATTATTATTTATCTCTTTT+GGG | + | chr7.4:39389831-39389850 | MS.gene055149:intron | 10.0% |
| !!! | TTATTATTATTTATCTCTTT+TGG | + | chr7.4:39389830-39389849 | MS.gene055149:intron | 10.0% |
| !!! | TTGATTTCTTTTTAAAATTA+CGG | + | chr7.4:39390261-39390280 | MS.gene055149:intron | 10.0% |
| !!! | TTTTATTAATAATAATTGTG+TGG | + | chr7.4:39389743-39389762 | MS.gene055149:intron | 10.0% |
| !! | AATAAATATGATATTTGAAG+TGG | - | chr7.4:39390493-39390512 | None:intergenic | 15.0% |
| !! | AGCTAAATATATATTATTAG+GGG | + | chr7.4:39389960-39389979 | MS.gene055149:intron | 15.0% |
| !! | GTAGCTAAATATATATTATT+AGG | + | chr7.4:39389958-39389977 | MS.gene055149:intron | 15.0% |
| !! | GTTACATTAATTATATTTGT+AGG | - | chr7.4:39389462-39389481 | None:intergenic | 15.0% |
| !! | TATATACATTTACAAATACA+GGG | - | chr7.4:39390076-39390095 | None:intergenic | 15.0% |
| !! | TTATATACATTTACAAATAC+AGG | - | chr7.4:39390077-39390096 | None:intergenic | 15.0% |
| !! | AATAAAAAAACAAGGTAAAG+TGG | - | chr7.4:39389730-39389749 | None:intergenic | 20.0% |
| !! | AATATTCAAGAAGAATAATC+TGG | + | chr7.4:39390656-39390675 | MS.gene055149:intron | 20.0% |
| !! | ACAGTAAAATAATACAAAAG+TGG | - | chr7.4:39389793-39389812 | None:intergenic | 20.0% |
| !! | AGTTCACTTAAAATAAAACT+TGG | + | chr7.4:39389934-39389953 | MS.gene055149:intron | 20.0% |
| !! | ATATACATTTACAAATACAG+GGG | - | chr7.4:39390075-39390094 | None:intergenic | 20.0% |
| !! | ATATCATTATGAACTAATAC+AGG | - | chr7.4:39388328-39388347 | None:intergenic | 20.0% |
| !! | ATGACTATTATATATGTTTG+TGG | + | chr7.4:39390531-39390550 | MS.gene055149:intron | 20.0% |
| !! | ATTATTTAATCGTGTCATAT+AGG | - | chr7.4:39389873-39389892 | None:intergenic | 20.0% |
| !! | CAGTAAAATAATACAAAAGT+GGG | - | chr7.4:39389792-39389811 | None:intergenic | 20.0% |
| !! | GCAAAAAATTAGTAGAATAT+GGG | - | chr7.4:39389312-39389331 | None:intergenic | 20.0% |
| !! | GTTCACTTAAAATAAAACTT+GGG | + | chr7.4:39389935-39389954 | MS.gene055149:intron | 20.0% |
| !! | TGCAAAAAATTAGTAGAATA+TGG | - | chr7.4:39389313-39389332 | None:intergenic | 20.0% |
| !! | TTCACTTAAAATAAAACTTG+GGG | + | chr7.4:39389936-39389955 | MS.gene055149:intron | 20.0% |
| !!! | AAATATTTTTTTGAGTGAGT+AGG | - | chr7.4:39390006-39390025 | None:intergenic | 20.0% |
| !!! | ACACTGGTTTAAAAAAATTA+AGG | - | chr7.4:39390778-39390797 | None:intergenic | 20.0% |
| ! | ACGTATTATACCAAAAAATG+TGG | + | chr7.4:39388938-39388957 | MS.gene055149:intron | 25.0% |
| ! | AGAGAAAAACATAATACATG+TGG | + | chr7.4:39388768-39388787 | MS.gene055149:intron | 25.0% |
| ! | ATACCAATATCAGTTAGAAA+AGG | + | chr7.4:39388249-39388268 | MS.gene055149:CDS | 25.0% |
| ! | TAAAATATTTCACAAGCATG+TGG | + | chr7.4:39388688-39388707 | MS.gene055149:intron | 25.0% |
| ! | TCTAAGTTTAAATACAGCTT+TGG | - | chr7.4:39389599-39389618 | None:intergenic | 25.0% |
| ! | TTAAACTAATCTAATGCAGT+AGG | + | chr7.4:39388851-39388870 | MS.gene055149:intron | 25.0% |
| ! | TTGCAATTAAGTCATTAGAT+TGG | - | chr7.4:39389382-39389401 | None:intergenic | 25.0% |
| ! | TTTATGAAAATTGAACTCGA+CGG | + | chr7.4:39389053-39389072 | MS.gene055149:intron | 25.0% |
| !! | GTATTATGTTTTTCTCTATG+CGG | - | chr7.4:39388765-39388784 | None:intergenic | 25.0% |
| !! | TCAACATTGATAATATTTGC+AGG | - | chr7.4:39389552-39389571 | None:intergenic | 25.0% |
| !! | TGATTTTCTTTCAAATAGCT+TGG | - | chr7.4:39389155-39389174 | None:intergenic | 25.0% |
| !!! | GTTATATTTTGAAAAGACTG+AGG | + | chr7.4:39389349-39389368 | MS.gene055149:intron | 25.0% |
| !!! | TAGTTTATTGCCACATTTTT+TGG | - | chr7.4:39388951-39388970 | None:intergenic | 25.0% |
| !!! | TTCTTTTGTTGTAGCTTTTT+TGG | - | chr7.4:39389013-39389032 | None:intergenic | 25.0% |
| AAAAAGCCACATTAGAATAG+CGG | + | chr7.4:39388981-39389000 | MS.gene055149:intron | 30.0% | |
| AATATCAGTTAGAAAAGGCA+GGG | + | chr7.4:39388254-39388273 | MS.gene055149:CDS | 30.0% | |
| AATTCCTTGTAATTGTTGCT+AGG | + | chr7.4:39389571-39389590 | MS.gene055149:intron | 30.0% | |
| AATTTCCCAAGCTTTACAAA+TGG | + | chr7.4:39391018-39391037 | MS.gene055149:CDS | 30.0% | |
| ACACTGTATACTATATGTAG+GGG | - | chr7.4:39388602-39388621 | None:intergenic | 30.0% | |
| ACAGGAACTTTCTTATAAAC+AGG | - | chr7.4:39388310-39388329 | None:intergenic | 30.0% | |
| ACATGTGGATATTTGTACAA+CGG | + | chr7.4:39388783-39388802 | MS.gene055149:intron | 30.0% | |
| AGCAAGAAAGAATTCATTTG+AGG | - | chr7.4:39389405-39389424 | None:intergenic | 30.0% | |
| CAGGAACTTTCTTATAAACA+GGG | - | chr7.4:39388309-39388328 | None:intergenic | 30.0% | |
| CTTGGTTATCTACATTGAAA+AGG | - | chr7.4:39389137-39389156 | None:intergenic | 30.0% | |
| GACACTGTATACTATATGTA+GGG | - | chr7.4:39388603-39388622 | None:intergenic | 30.0% | |
| GATGAATTTGAGTCTTTGAA+GGG | - | chr7.4:39389079-39389098 | None:intergenic | 30.0% | |
| TAATAATAATTGTGTGGACG+TGG | + | chr7.4:39389749-39389768 | MS.gene055149:intron | 30.0% | |
| TACCTTATCATCTATGAACT+TGG | - | chr7.4:39388458-39388477 | None:intergenic | 30.0% | |
| ! | TGAGATATAATGACTTGTGA+CGG | - | chr7.4:39390613-39390632 | None:intergenic | 30.0% |
| !! | AGCTTTAAAGTGTATAAGTG+GGG | + | chr7.4:39388555-39388574 | MS.gene055149:intron | 30.0% |
| !! | CAATATTGGATTTTGTTTCC+AGG | - | chr7.4:39388395-39388414 | None:intergenic | 30.0% |
| !! | CAGCTTTAAAGTGTATAAGT+GGG | + | chr7.4:39388554-39388573 | MS.gene055149:intron | 30.0% |
| !! | TCAGCTTTAAAGTGTATAAG+TGG | + | chr7.4:39388553-39388572 | MS.gene055149:intron | 30.0% |
| !!! | ATTTTTTTTTTGGGGTAGCA+AGG | + | chr7.4:39390022-39390041 | MS.gene055149:intron | 30.0% |
| !!! | CTATTCTAATGTGGCTTTTT+TGG | - | chr7.4:39388981-39389000 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTGGGGTAGCAA+GGG | + | chr7.4:39390023-39390042 | MS.gene055149:intron | 30.0% |
| AAATACCACAAACCTCACTA+AGG | + | chr7.4:39390099-39390118 | MS.gene055149:intron | 35.0% | |
| AAGCTAGCGATAATTCTATG+AGG | + | chr7.4:39388808-39388827 | MS.gene055149:intron | 35.0% | |
| AATACCACAAACCTCACTAA+GGG | + | chr7.4:39390100-39390119 | MS.gene055149:intron | 35.0% | |
| AATCACAAGGGATTCTGATA+TGG | - | chr7.4:39388353-39388372 | None:intergenic | 35.0% | |
| ATACGCTAGAGAGACATTTA+GGG | - | chr7.4:39390456-39390475 | None:intergenic | 35.0% | |
| ATATTTCACAAGCATGTGGA+TGG | + | chr7.4:39388692-39388711 | MS.gene055149:intron | 35.0% | |
| ATCACAAGGGATTCTGATAT+GGG | - | chr7.4:39388352-39388371 | None:intergenic | 35.0% | |
| ATTCTTGAGAATGAGCTCAA+AGG | + | chr7.4:39390882-39390901 | MS.gene055149:CDS | 35.0% | |
| CAATATCAGTTAGAAAAGGC+AGG | + | chr7.4:39388253-39388272 | MS.gene055149:CDS | 35.0% | |
| CTCAAAGGAAAATTCTTTGG+TGG | + | chr7.4:39390897-39390916 | MS.gene055149:CDS | 35.0% | |
| CTCATAGTCATTCATGTTCT+TGG | + | chr7.4:39390557-39390576 | MS.gene055149:intron | 35.0% | |
| CTTTATCCTTAACAACTGGA+TGG | - | chr7.4:39391061-39391080 | None:intergenic | 35.0% | |
| GAAATACGTTCATGTGATCT+CGG | - | chr7.4:39388639-39388658 | None:intergenic | 35.0% | |
| GACATACTCAAGAATCACAA+GGG | - | chr7.4:39388365-39388384 | None:intergenic | 35.0% | |
| GACCAAGTTCATAGATGATA+AGG | + | chr7.4:39388453-39388472 | MS.gene055149:CDS | 35.0% | |
| GAGATTCAATGAACAAACTG+TGG | - | chr7.4:39389626-39389645 | None:intergenic | 35.0% | |
| GAGATTGCTCTAACATTGAA+GGG | + | chr7.4:39388220-39388239 | MS.gene055149:CDS | 35.0% | |
| GAGCTCAAAGGAAAATTCTT+TGG | + | chr7.4:39390894-39390913 | MS.gene055149:CDS | 35.0% | |
| GGACACTGTATACTATATGT+AGG | - | chr7.4:39388604-39388623 | None:intergenic | 35.0% | |
| GGATGAATTTGAGTCTTTGA+AGG | - | chr7.4:39389080-39389099 | None:intergenic | 35.0% | |
| GGTTGTGATAGATGAAATGA+AGG | - | chr7.4:39389659-39389678 | None:intergenic | 35.0% | |
| TAAGGATCAGAAGGCAATAT+TGG | - | chr7.4:39388409-39388428 | None:intergenic | 35.0% | |
| TAATCGTGTCATATAGGAAC+CGG | - | chr7.4:39389867-39389886 | None:intergenic | 35.0% | |
| TACAATCCGCTATTCTAATG+TGG | - | chr7.4:39388990-39389009 | None:intergenic | 35.0% | |
| TATACGCTAGAGAGACATTT+AGG | - | chr7.4:39390457-39390476 | None:intergenic | 35.0% | |
| TGACTCCATTTGTAAAGCTT+GGG | - | chr7.4:39391026-39391045 | None:intergenic | 35.0% | |
| TGTATACTATATGTAGGGGT+CGG | - | chr7.4:39388598-39388617 | None:intergenic | 35.0% | |
| TTGACTCCATTTGTAAAGCT+TGG | - | chr7.4:39391027-39391046 | None:intergenic | 35.0% | |
| TTTGGATTGAGGGTTTAAGA+GGG | - | chr7.4:39390429-39390448 | None:intergenic | 35.0% | |
| ! | ATTTGAAGTGGTTCTCAATG+TGG | - | chr7.4:39390481-39390500 | None:intergenic | 35.0% |
| ! | CAGGAAAATGTGAAGCTTTT+TGG | + | chr7.4:39388166-39388185 | MS.gene055149:CDS | 35.0% |
| ! | CTGCCTTTTCTAACTGATAT+TGG | - | chr7.4:39388255-39388274 | None:intergenic | 35.0% |
| ! | GTTTAGCTCAGATGCAATTA+TGG | - | chr7.4:39389101-39389120 | None:intergenic | 35.0% |
| ! | TCTTTATTTGTGCACATGTG+TGG | + | chr7.4:39388664-39388683 | MS.gene055149:intron | 35.0% |
| ! | TTTGTTGCTTCTTGTACGAT+GGG | - | chr7.4:39390975-39390994 | None:intergenic | 35.0% |
| !! | TATAATGACTTGTGACGGAT+TGG | - | chr7.4:39390608-39390627 | None:intergenic | 35.0% |
| !! | TCTTTTGGGTGTTAATCTTC+CGG | + | chr7.4:39389845-39389864 | MS.gene055149:intron | 35.0% |
| !!! | TGTGAAGCTTTTTGGAATGA+TGG | + | chr7.4:39388174-39388193 | MS.gene055149:CDS | 35.0% |
| AATAATTGTGTGGACGTGGT+GGG | + | chr7.4:39389753-39389772 | MS.gene055149:intron | 40.0% | |
| AGAACGTGAGAAAGCTATTG+AGG | + | chr7.4:39390839-39390858 | MS.gene055149:CDS | 40.0% | |
| AGGAAAATTCTTTGGTGGAG+AGG | + | chr7.4:39390902-39390921 | MS.gene055149:CDS | 40.0% | |
| ATCCTTAACAACTGGATGGT+TGG | - | chr7.4:39391057-39391076 | None:intergenic | 40.0% | |
| CGACATACTCAAGAATCACA+AGG | - | chr7.4:39388366-39388385 | None:intergenic | 40.0% | |
| CTAGCGATAATTCTATGAGG+TGG | + | chr7.4:39388811-39388830 | MS.gene055149:intron | 40.0% | |
| GGAGATTGCTCTAACATTGA+AGG | + | chr7.4:39388219-39388238 | MS.gene055149:CDS | 40.0% | |
| GGATCCTAGCAACAATTACA+AGG | - | chr7.4:39389578-39389597 | None:intergenic | 40.0% | |
| GTTTGGATTGAGGGTTTAAG+AGG | - | chr7.4:39390430-39390449 | None:intergenic | 40.0% | |
| TAATAATTGTGTGGACGTGG+TGG | + | chr7.4:39389752-39389771 | MS.gene055149:intron | 40.0% | |
| TCACAACACAACACACAACA+CGG | - | chr7.4:39389690-39389709 | None:intergenic | 40.0% | |
| TGATCCTTACAAAAGAGCCT+TGG | + | chr7.4:39388420-39388439 | MS.gene055149:CDS | 40.0% | |
| TGTGTTTGGATGGAGGATTT+AGG | + | chr7.4:39390123-39390142 | MS.gene055149:intron | 40.0% | |
| TTAGGGTGTGTTTGGATTGA+GGG | - | chr7.4:39390439-39390458 | None:intergenic | 40.0% | |
| TTGGATTGAGGGTTTAAGAG+GGG | - | chr7.4:39390428-39390447 | None:intergenic | 40.0% | |
| TTTACAAATACAGGGGCGAA+TGG | - | chr7.4:39390068-39390087 | None:intergenic | 40.0% | |
| TTTGGATGGAGGATTTAGGA+GGG | + | chr7.4:39390127-39390146 | MS.gene055149:intron | 40.0% | |
| ! | AGAGACATTTAGGGTGTGTT+TGG | - | chr7.4:39390447-39390466 | None:intergenic | 40.0% |
| ! | CGAGCTTTATCCTTAACAAC+TGG | - | chr7.4:39391065-39391084 | None:intergenic | 40.0% |
| ! | CTGCAGTCTTCATAGCTTTT+TGG | + | chr7.4:39390946-39390965 | MS.gene055149:CDS | 40.0% |
| ! | GCTCTTTTGTAAGGATCAGA+AGG | - | chr7.4:39388418-39388437 | None:intergenic | 40.0% |
| ! | GTTTGTTGCTTCTTGTACGA+TGG | - | chr7.4:39390976-39390995 | None:intergenic | 40.0% |
| ! | TTGTTGCTTCTTGTACGATG+GGG | - | chr7.4:39390974-39390993 | None:intergenic | 40.0% |
| ! | TTTAGGGTGTGTTTGGATTG+AGG | - | chr7.4:39390440-39390459 | None:intergenic | 40.0% |
| AAGTCCATTTGTGAGTAGGG+TGG | + | chr7.4:39388198-39388217 | MS.gene055149:CDS | 45.0% | |
| ACACACAACACGGGATTTCT+TGG | - | chr7.4:39389680-39389699 | None:intergenic | 45.0% | |
| ATCCAAACACACCCTTAGTG+AGG | - | chr7.4:39390114-39390133 | None:intergenic | 45.0% | |
| ATCTCCACCCTACTCACAAA+TGG | - | chr7.4:39388205-39388224 | None:intergenic | 45.0% | |
| CACAACACAACACACAACAC+GGG | - | chr7.4:39389689-39389708 | None:intergenic | 45.0% | |
| CACCAACCATCCAGTTGTTA+AGG | + | chr7.4:39391052-39391071 | MS.gene055149:CDS | 45.0% | |
| GGCAAGTCCATTTGTGAGTA+GGG | + | chr7.4:39388195-39388214 | MS.gene055149:CDS | 45.0% | |
| GTTTGGATGGAGGATTTAGG+AGG | + | chr7.4:39390126-39390145 | MS.gene055149:intron | 45.0% | |
| TCATGTGATCTCGGTTCAGT+TGG | - | chr7.4:39388630-39388649 | None:intergenic | 45.0% | |
| TGATCTCGGTTCAGTTGGAT+GGG | - | chr7.4:39388625-39388644 | None:intergenic | 45.0% | |
| TGGCAAGTCCATTTGTGAGT+AGG | + | chr7.4:39388194-39388213 | MS.gene055149:CDS | 45.0% | |
| TTCTTTGGTGGAGAGGAGAT+TGG | + | chr7.4:39390909-39390928 | MS.gene055149:CDS | 45.0% | |
| TTGAGTATGTCGATGAGACC+TGG | + | chr7.4:39388374-39388393 | MS.gene055149:CDS | 45.0% | |
| TTGGATGGAGGATTTAGGAG+GGG | + | chr7.4:39390128-39390147 | MS.gene055149:intron | 45.0% | |
| ! | AACCTCACTAAGGGTGTGTT+TGG | + | chr7.4:39390109-39390128 | MS.gene055149:intron | 45.0% |
| ! | ACCAGTGTTTAAGTGCTGCA+CGG | + | chr7.4:39390790-39390809 | MS.gene055149:intron | 45.0% |
| ! | TCACTAAGGGTGTGTTTGGA+TGG | + | chr7.4:39390113-39390132 | MS.gene055149:intron | 45.0% |
| !! | TTATTATTAATAAAAAAACA+AGG | - | chr7.4:39389738-39389757 | None:intergenic | 5.0% |
| !!! | AAAAAAATATTTTTTTTTTG+GGG | + | chr7.4:39390014-39390033 | MS.gene055149:intron | 5.0% |
| !!! | CAAAAAAATATTTTTTTTTT+GGG | + | chr7.4:39390013-39390032 | MS.gene055149:intron | 5.0% |
| !!! | TAGTTTTTATTTTTAAATTA+CGG | - | chr7.4:39390389-39390408 | None:intergenic | 5.0% |
| !!! | TCAAAAAAATATTTTTTTTT+TGG | + | chr7.4:39390012-39390031 | MS.gene055149:intron | 5.0% |
| ACAAATACAGGGGCGAATGG+TGG | - | chr7.4:39390065-39390084 | None:intergenic | 50.0% | |
| AGGGGCGAATGGTGGTATAA+GGG | - | chr7.4:39390057-39390076 | None:intergenic | 50.0% | |
| ATGGAGGATTTAGGAGGGGA+AGG | + | chr7.4:39390132-39390151 | MS.gene055149:intron | 50.0% | |
| ATTGAGGGTTTAAGAGGGGC+AGG | - | chr7.4:39390424-39390443 | None:intergenic | 50.0% | |
| CACACCCTTAGTGAGGTTTG+TGG | - | chr7.4:39390107-39390126 | None:intergenic | 50.0% | |
| CGAATGGTGGTATAAGGGAC+GGG | - | chr7.4:39390052-39390071 | None:intergenic | 50.0% | |
| GCGAATGGTGGTATAAGGGA+CGG | - | chr7.4:39390053-39390072 | None:intergenic | 50.0% | |
| GTGATCTCGGTTCAGTTGGA+TGG | - | chr7.4:39388626-39388645 | None:intergenic | 50.0% | |
| TCCGTGCAGCACTTAAACAC+TGG | - | chr7.4:39390794-39390813 | None:intergenic | 50.0% | |
| TGGAGGATTTAGGAGGGGAA+GGG | + | chr7.4:39390133-39390152 | MS.gene055149:intron | 50.0% | |
| TTGAGGGTTTAAGAGGGGCA+GGG | - | chr7.4:39390423-39390442 | None:intergenic | 50.0% | |
| TTGTTGTCGCTGTGGAGACT+GGG | + | chr7.4:39389233-39389252 | MS.gene055149:intron | 50.0% | |
| ! | AAAGAGCCTTGGCTCGTTTC+TGG | + | chr7.4:39388431-39388450 | MS.gene055149:CDS | 50.0% |
| ! | AGCTCTCTTTGTTGTCGCTG+TGG | + | chr7.4:39389225-39389244 | MS.gene055149:intron | 50.0% |
| ! | CGAGCCAAGGCTCTTTTGTA+AGG | - | chr7.4:39388427-39388446 | None:intergenic | 50.0% |
| ! | CTAAGGGTGTGTTTGGATGG+AGG | + | chr7.4:39390116-39390135 | MS.gene055149:intron | 50.0% |
| ! | TTTGTTGTCGCTGTGGAGAC+TGG | + | chr7.4:39389232-39389251 | MS.gene055149:intron | 50.0% |
| AGGATTTAGGAGGGGAAGGG+AGG | + | chr7.4:39390136-39390155 | MS.gene055149:intron | 55.0% | |
| AGGGGTCGGAGTTCGAACTT+CGG | - | chr7.4:39388584-39388603 | None:intergenic | 55.0% | |
| CAGGGGCGAATGGTGGTATA+AGG | - | chr7.4:39390058-39390077 | None:intergenic | 55.0% | |
| CTTGGTCCAGAAACGAGCCA+AGG | - | chr7.4:39388440-39388459 | None:intergenic | 55.0% | |
| GATTTAGGAGGGGAAGGGAG+GGG | + | chr7.4:39390138-39390157 | MS.gene055149:intron | 55.0% | |
| GGATTTAGGAGGGGAAGGGA+GGG | + | chr7.4:39390137-39390156 | MS.gene055149:intron | 55.0% | |
| GGTTTAAGAGGGGCAGGGAG+AGG | - | chr7.4:39390418-39390437 | None:intergenic | 60.0% | |
| TAAGAGGGGCAGGGAGAGGA+GGG | - | chr7.4:39390414-39390433 | None:intergenic | 60.0% | |
| TTAAGAGGGGCAGGGAGAGG+AGG | - | chr7.4:39390415-39390434 | None:intergenic | 60.0% | |
| !! | GTGTGGACGTGGTGGGTTGT+GGG | + | chr7.4:39389760-39389779 | MS.gene055149:intron | 60.0% |
| !! | TGTGTGGACGTGGTGGGTTG+TGG | + | chr7.4:39389759-39389778 | MS.gene055149:intron | 60.0% |
| TAGGAGGGGAAGGGAGGGGA+GGG | + | chr7.4:39390142-39390161 | MS.gene055149:intron | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | + | chr7.4:39390141-39390160 | MS.gene055149:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 39388154 | 39391112 | 39388154 | ID=MS.gene055149 |
| chr7.4 | mRNA | 39388154 | 39391112 | 39388154 | ID=MS.gene055149.t1;Parent=MS.gene055149 |
| chr7.4 | exon | 39388154 | 39388474 | 39388154 | ID=MS.gene055149.t1.exon1;Parent=MS.gene055149.t1 |
| chr7.4 | CDS | 39388154 | 39388474 | 39388154 | ID=cds.MS.gene055149.t1;Parent=MS.gene055149.t1 |
| chr7.4 | exon | 39390795 | 39391112 | 39390795 | ID=MS.gene055149.t1.exon2;Parent=MS.gene055149.t1 |
| chr7.4 | CDS | 39390795 | 39391112 | 39390795 | ID=cds.MS.gene055149.t1;Parent=MS.gene055149.t1 |
| Gene Sequence |
| Protein sequence |
