Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96085.t1 | XP_024626924.1 | 91.2 | 883 | 74 | 3 | 1 | 879 | 1 | 883 | 0.00E+00 | 1315.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96085.t1 | A0A1S3E141 | 83.8 | 885 | 122 | 9 | 1 | 879 | 1 | 870 | 0.0e+00 | 1159.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene96085 | 0.805691 | 1.18E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene96085 | 0.806632 | 7.49E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene96085 | 0.807519 | 4.86E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene96085 | 0.810987 | 8.77E-51 | -1.69E-46 |
| MS.gene050438 | MS.gene96085 | 0.815583 | 8.58E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene96085 | 0.811765 | 5.94E-51 | -1.69E-46 |
| MS.gene050719 | MS.gene96085 | 0.800353 | 1.50E-48 | -1.69E-46 |
| MS.gene050780 | MS.gene96085 | 0.821087 | 4.86E-53 | -1.69E-46 |
| MS.gene050959 | MS.gene96085 | 0.85011 | 2.10E-60 | -1.69E-46 |
| MS.gene051265 | MS.gene96085 | 0.805233 | 1.47E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene96085 | 0.863437 | 2.49E-64 | -1.69E-46 |
| MS.gene05215 | MS.gene96085 | 0.80637 | 8.50E-50 | -1.69E-46 |
| MS.gene052611 | MS.gene96085 | 0.80971 | 1.65E-50 | -1.69E-46 |
| MS.gene052612 | MS.gene96085 | 0.800963 | 1.13E-48 | -1.69E-46 |
| MS.gene052613 | MS.gene96085 | 0.806808 | 6.87E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene96085 | 0.828739 | 7.60E-55 | -1.69E-46 |
| MS.gene052896 | MS.gene96085 | 0.808848 | 2.53E-50 | -1.69E-46 |
| MS.gene053221 | MS.gene96085 | 0.81399 | 1.94E-51 | -1.69E-46 |
| MS.gene055356 | MS.gene96085 | 0.804252 | 2.36E-49 | -1.69E-46 |
| MS.gene055357 | MS.gene96085 | 0.824898 | 6.29E-54 | -1.69E-46 |
| MS.gene055358 | MS.gene96085 | 0.826102 | 3.26E-54 | -1.69E-46 |
| MS.gene055512 | MS.gene96085 | 0.804332 | 2.27E-49 | -1.69E-46 |
| MS.gene055608 | MS.gene96085 | 0.800624 | 1.32E-48 | -1.69E-46 |
| MS.gene056553 | MS.gene96085 | 0.809055 | 2.29E-50 | -1.69E-46 |
| MS.gene056643 | MS.gene96085 | 0.817803 | 2.73E-52 | -1.69E-46 |
| MS.gene057869 | MS.gene96085 | 0.819939 | 8.92E-53 | -1.69E-46 |
| MS.gene057915 | MS.gene96085 | 0.810138 | 1.34E-50 | -1.69E-46 |
| MS.gene058168 | MS.gene96085 | 0.813741 | 2.20E-51 | -1.69E-46 |
| MS.gene058636 | MS.gene96085 | 0.801758 | 7.74E-49 | -1.69E-46 |
| MS.gene058829 | MS.gene96085 | 0.825291 | 5.08E-54 | -1.69E-46 |
| MS.gene058982 | MS.gene96085 | 0.807677 | 4.50E-50 | -1.69E-46 |
| MS.gene059725 | MS.gene96085 | 0.813247 | 2.82E-51 | -1.69E-46 |
| MS.gene060470 | MS.gene96085 | 0.810798 | 9.64E-51 | -1.69E-46 |
| MS.gene060690 | MS.gene96085 | 0.800291 | 1.54E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96085.t1 | MTR_7g075140 | 96.556 | 900 | 24 | 5 | 1 | 896 | 1 | 897 | 0.0 | 1750 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96085.t1 | AT2G45460 | 50.720 | 903 | 362 | 19 | 28 | 889 | 40 | 900 | 0.0 | 761 |
| MS.gene96085.t1 | AT2G45460 | 50.609 | 903 | 362 | 20 | 28 | 889 | 40 | 899 | 0.0 | 755 |
| MS.gene96085.t1 | AT2G45460 | 49.945 | 917 | 362 | 20 | 28 | 889 | 40 | 914 | 0.0 | 753 |
| MS.gene96085.t1 | AT2G45460 | 49.836 | 917 | 362 | 21 | 28 | 889 | 40 | 913 | 0.0 | 746 |
Find 167 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATTGCTTCTTGTGTATTT+TGG | 0.205635 | 7.4:-30038257 | None:intergenic |
| CAAATGGAACTTACCTTAAC+TGG | 0.254521 | 7.4:+30032579 | MS.gene96085:CDS |
| CAATTCTGATCCTAATGTTT+GGG | 0.264024 | 7.4:+30031228 | MS.gene96085:CDS |
| GAGAAGCAGAACGCTGAAAA+TGG | 0.287480 | 7.4:+30036809 | MS.gene96085:CDS |
| AAGAGGTTGAGAAGCGAAAT+TGG | 0.291868 | 7.4:-30031203 | None:intergenic |
| GGATTCTGCTGCTGCTTGTT+AGG | 0.295457 | 7.4:-30031136 | None:intergenic |
| TTTGAAAGGAGGAGGTTAAA+AGG | 0.298717 | 7.4:+30037516 | MS.gene96085:CDS |
| TCAAATTGTTCTTTCAAATC+AGG | 0.300884 | 7.4:-30038888 | None:intergenic |
| AACAAGGATGGTCCTTTAGA+AGG | 0.306789 | 7.4:+30038459 | MS.gene96085:CDS |
| TGTGGGCACTGAACGAGTTC+TGG | 0.313518 | 7.4:+30038392 | MS.gene96085:CDS |
| CAAGATTACTAATGAAAATA+TGG | 0.313658 | 7.4:+30032404 | MS.gene96085:CDS |
| AACAAGAGATTGAAAGGTTT+GGG | 0.318095 | 7.4:+30034324 | MS.gene96085:CDS |
| ACAATTCTGATCCTAATGTT+TGG | 0.318610 | 7.4:+30031227 | MS.gene96085:CDS |
| AACAAGAAACAAGAAGATTA+AGG | 0.324877 | 7.4:+30036945 | MS.gene96085:CDS |
| AACAGATACAATGCGATCTT+TGG | 0.333848 | 7.4:-30031176 | None:intergenic |
| AAACAAGAGATTGAAAGGTT+TGG | 0.340768 | 7.4:+30034323 | MS.gene96085:CDS |
| TATGAAGATCGATGATGATA+TGG | 0.348596 | 7.4:+30038488 | MS.gene96085:CDS |
| GGAGATTACATACACTTTCA+TGG | 0.358919 | 7.4:-30034576 | None:intergenic |
| CTTCTGAAGTCGCCGCTAGC+TGG | 0.359986 | 7.4:+30038676 | MS.gene96085:CDS |
| TCAAAAGCAGGGTGATTCTA+TGG | 0.360002 | 7.4:+30039067 | MS.gene96085:CDS |
| TGACAATAATTCTGTAGATA+TGG | 0.366035 | 7.4:+30038062 | MS.gene96085:CDS |
| AATAAAAGATTTACAGCAAA+TGG | 0.374198 | 7.4:+30034859 | MS.gene96085:CDS |
| ACAGGAATTGAGAAAGCAAT+TGG | 0.375970 | 7.4:+30034495 | MS.gene96085:intron |
| GGAACCTCGGGAAGAGAAAA+AGG | 0.381881 | 7.4:+30038099 | MS.gene96085:CDS |
| ACACCGAGTTAGATCTTTGA+AGG | 0.386029 | 7.4:-30034392 | None:intergenic |
| CGAAAATCATCAAGAGATAT+AGG | 0.386301 | 7.4:-30034366 | None:intergenic |
| GAGAATTGCCGTTGGATCTC+GGG | 0.390703 | 7.4:-30031114 | None:intergenic |
| ATCATTGTTTGCTAAGCAAC+AGG | 0.392288 | 7.4:+30037993 | MS.gene96085:CDS |
| GGTCTTCGGTTCTGATTAGA+TGG | 0.394887 | 7.4:-30038647 | None:intergenic |
| GAATCATTGTTCAGCACAAA+TGG | 0.396216 | 7.4:+30032563 | MS.gene96085:intron |
| ACTGAAAGTCTGTCAAATAA+TGG | 0.399585 | 7.4:+30038417 | MS.gene96085:CDS |
| TATGGATGAGGATGAGGAAG+AGG | 0.407916 | 7.4:+30039085 | MS.gene96085:CDS |
| CGGCGACTTCAGAAGTTATA+AGG | 0.408177 | 7.4:-30038668 | None:intergenic |
| TTCAGAAGTTATAAGGTCTT+CGG | 0.409411 | 7.4:-30038661 | None:intergenic |
| GAAAGTTCACGACAAGGTAT+TGG | 0.412307 | 7.4:-30038558 | None:intergenic |
| GTGAGAACACCCCAAACATT+AGG | 0.412670 | 7.4:-30031238 | None:intergenic |
| GCAGCATCAGAAGGAGTGTT+TGG | 0.414823 | 7.4:-30038810 | None:intergenic |
| GGAGAATTGCCGTTGGATCT+CGG | 0.419586 | 7.4:-30031115 | None:intergenic |
| TAGAGCGCAGTCTGAGGCTC+AGG | 0.427214 | 7.4:+30036412 | MS.gene96085:CDS |
| ACTATTGAGGTTGCAGAAGC+TGG | 0.428721 | 7.4:+30038621 | MS.gene96085:CDS |
| GAAGAGAAAACCCGCGGAAA+CGG | 0.429973 | 7.4:+30031085 | MS.gene96085:CDS |
| AGGAACTAGGAGATGTCAAC+AGG | 0.430784 | 7.4:+30034897 | MS.gene96085:CDS |
| TAACGGAATTCGAATCAATC+TGG | 0.432142 | 7.4:-30032353 | None:intergenic |
| GAGAAAAGAAGAACGAGAAA+AGG | 0.436015 | 7.4:+30036361 | MS.gene96085:CDS |
| TTGGGCATTGGTGCTGCTGA+GGG | 0.437586 | 7.4:+30034342 | MS.gene96085:CDS |
| GGTTCTGATGTTGATGGTGT+TGG | 0.439214 | 7.4:+30038342 | MS.gene96085:CDS |
| CGGGGTTCCTCCGTTTCCGC+GGG | 0.443153 | 7.4:-30031095 | None:intergenic |
| TTCTGAAGTCGCCGCTAGCT+GGG | 0.447963 | 7.4:+30038677 | MS.gene96085:CDS |
| AGATTGAAAGGTTTGGGCAT+TGG | 0.450330 | 7.4:+30034330 | MS.gene96085:CDS |
| AGAGACAATAATGAAGGTTC+AGG | 0.450952 | 7.4:+30038750 | MS.gene96085:CDS |
| TGTGTTGGTTCTGATGTTGA+TGG | 0.456042 | 7.4:+30038336 | MS.gene96085:CDS |
| AAGCACCAAGTCTTTCGTTA+AGG | 0.459590 | 7.4:-30034952 | None:intergenic |
| CTCTCCTGCTTGCAGTCAAA+AGG | 0.462865 | 7.4:+30036292 | MS.gene96085:intron |
| CAAATCATTGCAGAATATAC+AGG | 0.467927 | 7.4:+30032379 | MS.gene96085:CDS |
| TTTGGGCATTGGTGCTGCTG+AGG | 0.468907 | 7.4:+30034341 | MS.gene96085:CDS |
| GAGAAAGCAATTGGAGAGTC+AGG | 0.469420 | 7.4:+30034504 | MS.gene96085:CDS |
| CAATGCCCGCAAAAGGCATC+AGG | 0.470674 | 7.4:+30031273 | MS.gene96085:CDS |
| TGGTGATATTATATCATTTG+CGG | 0.473414 | 7.4:+30032643 | MS.gene96085:CDS |
| TTGGCTCCTAAAATTGATGC+TGG | 0.476028 | 7.4:-30031157 | None:intergenic |
| TCTGAAAACAAGAGATTGAA+AGG | 0.477784 | 7.4:+30034318 | MS.gene96085:CDS |
| GAAGCTTGATCAAATACCTA+TGG | 0.479075 | 7.4:+30038518 | MS.gene96085:CDS |
| TCTCTAACAATGCCCGCAAA+AGG | 0.481899 | 7.4:+30031266 | MS.gene96085:CDS |
| AATGGTTGATCTCAAACAAA+AGG | 0.488423 | 7.4:+30034877 | MS.gene96085:CDS |
| GGAGGAGGTTAAAAGGTGCC+AGG | 0.490686 | 7.4:+30037523 | MS.gene96085:CDS |
| GATGTACTTGAGTTTCCAAC+TGG | 0.491314 | 7.4:-30036784 | None:intergenic |
| GCAACTCCATTGTCTGCCAC+AGG | 0.492185 | 7.4:-30033759 | None:intergenic |
| CAATATTCTTGAAAGATACA+AGG | 0.502738 | 7.4:+30032439 | MS.gene96085:CDS |
| TTCATAGTGTCCCCTTCTAA+AGG | 0.503376 | 7.4:-30038471 | None:intergenic |
| ACAAGGATGGTCCTTTAGAA+GGG | 0.504190 | 7.4:+30038460 | MS.gene96085:CDS |
| TGATTCTATGGATGAGGATG+AGG | 0.507637 | 7.4:+30039079 | MS.gene96085:CDS |
| TCATGCTTCTCCGTTTCCAT+AGG | 0.512555 | 7.4:-30038534 | None:intergenic |
| CCGAAGCATGAGTCTTTCCC+TGG | 0.515121 | 7.4:-30037541 | None:intergenic |
| AATATCCGATGAAGAAACTC+AGG | 0.517234 | 7.4:+30039022 | MS.gene96085:CDS |
| CTGAGCAGAAGTACCTGCCT+TGG | 0.519090 | 7.4:-30038148 | None:intergenic |
| CAATCAATCAATGGCGATGG+AGG | 0.521706 | 7.4:+30031063 | None:intergenic |
| AGGCAGCTCGTGAAGAAGCA+TGG | 0.523785 | 7.4:+30037439 | MS.gene96085:CDS |
| GACACTTGCTTCGTTGCTCG+AGG | 0.524264 | 7.4:-30038196 | None:intergenic |
| TGTCGAGGAGGATCAAAAGC+AGG | 0.527285 | 7.4:+30039055 | MS.gene96085:CDS |
| TAAGCAACAGGAACAATTGA+AGG | 0.528373 | 7.4:+30038005 | MS.gene96085:CDS |
| GGAGTCGTAGGTGGAACCTC+GGG | 0.528716 | 7.4:+30038087 | MS.gene96085:CDS |
| AGAAGCAATAAATAAGCTAA+AGG | 0.530408 | 7.4:+30036487 | MS.gene96085:CDS |
| CCAGGGAAAGACTCATGCTT+CGG | 0.531031 | 7.4:+30037541 | MS.gene96085:CDS |
| AATCAAATGAACTTATAAGT+AGG | 0.531840 | 7.4:+30034993 | MS.gene96085:CDS |
| TGATCAAATACCTATGGAAA+CGG | 0.532572 | 7.4:+30038524 | MS.gene96085:CDS |
| TTGCATTGGACGATTGGTAG+AGG | 0.533917 | 7.4:+30032320 | MS.gene96085:CDS |
| CTGAATCAGATGAACCACTA+TGG | 0.535870 | 7.4:-30038938 | None:intergenic |
| GAAGATGCTGCTTGTCGAGA+GGG | 0.537000 | 7.4:+30038909 | MS.gene96085:CDS |
| TGTTGGCACAACAGCTATGA+TGG | 0.538744 | 7.4:+30038359 | MS.gene96085:CDS |
| GAGAAAACCCGCGGAAACGG+AGG | 0.539376 | 7.4:+30031088 | MS.gene96085:CDS |
| AAAAGCAGAGACAATAATGA+AGG | 0.541321 | 7.4:+30038744 | MS.gene96085:CDS |
| GGAGTTGCTAAACGCAAAGC+AGG | 0.542831 | 7.4:+30033774 | MS.gene96085:CDS |
| TCGGGGTTCCTCCGTTTCCG+CGG | 0.546346 | 7.4:-30031096 | None:intergenic |
| TGAGCATTGCATTGGACGAT+TGG | 0.547667 | 7.4:+30032314 | MS.gene96085:CDS |
| AGTAACAATGTTGCCAAGGC+AGG | 0.548771 | 7.4:+30038135 | MS.gene96085:CDS |
| TTTGCGGGCATTGTTAGAGA+TGG | 0.554853 | 7.4:-30031263 | None:intergenic |
| AATAATTCTGTAGATATGGA+TGG | 0.554979 | 7.4:+30038066 | MS.gene96085:CDS |
| TGATAATAAAGTTCGCCAGT+TGG | 0.558041 | 7.4:+30036769 | MS.gene96085:CDS |
| AGCGCAGTCTGAGGCTCAGG+AGG | 0.559183 | 7.4:+30036415 | MS.gene96085:CDS |
| GAACGCTGAAAATGGAATGA+AGG | 0.559703 | 7.4:+30036817 | MS.gene96085:CDS |
| GCAGGGTGATTCTATGGATG+AGG | 0.560143 | 7.4:+30039073 | MS.gene96085:CDS |
| ACTGCTGATGAGCATTGCAT+TGG | 0.560370 | 7.4:+30032306 | MS.gene96085:CDS |
| TCAAATCCTGTGGCAGACAA+TGG | 0.560728 | 7.4:+30033753 | MS.gene96085:CDS |
| GTCTGTCAAATAATGGTGAA+CGG | 0.562415 | 7.4:+30038424 | MS.gene96085:CDS |
| CTTGTTAGGAGAATTGCCGT+TGG | 0.566108 | 7.4:-30031122 | None:intergenic |
| TCTGCAATGATTTGCACTAA+CGG | 0.566289 | 7.4:-30032370 | None:intergenic |
| GGCAGCTCGTGAAGAAGCAT+GGG | 0.566802 | 7.4:+30037440 | MS.gene96085:CDS |
| CTGGCAACAGCAGCATCAGA+AGG | 0.569342 | 7.4:-30038819 | None:intergenic |
| CCTTGGCAACATTGTTACTG+TGG | 0.572967 | 7.4:-30038131 | None:intergenic |
| TACTGCTCCTTCTTTACATG+AGG | 0.573922 | 7.4:+30038707 | MS.gene96085:CDS |
| GGAGGAACCCCGAGATCCAA+CGG | 0.575822 | 7.4:+30031106 | MS.gene96085:CDS |
| GAGACAATAATGAAGGTTCA+GGG | 0.577880 | 7.4:+30038751 | MS.gene96085:CDS |
| GCTGCTGTCAAAGTCTGCCA+TGG | 0.578490 | 7.4:+30032623 | MS.gene96085:CDS |
| ATCTTTCAAGAATATTGATG+TGG | 0.580701 | 7.4:-30032433 | None:intergenic |
| ATTGAATGATTCAAATATTG+TGG | 0.581409 | 7.4:+30038776 | MS.gene96085:CDS |
| GATCTCAAACAAAAGGAACT+AGG | 0.581520 | 7.4:+30034884 | MS.gene96085:CDS |
| CGAGCACTAAGTGAGATGAT+TGG | 0.582146 | 7.4:+30038855 | MS.gene96085:CDS |
| ACCGTGGTCATGATCAGCAC+TGG | 0.585100 | 7.4:-30038304 | None:intergenic |
| AGAATTGCCGTTGGATCTCG+GGG | 0.588302 | 7.4:-30031113 | None:intergenic |
| AGCAATTCAAAATACACAAG+AGG | 0.590376 | 7.4:+30038272 | MS.gene96085:CDS |
| TGAAACATTGAGATCCAAGC+TGG | 0.591996 | 7.4:+30036625 | MS.gene96085:CDS |
| AATTCTGATCCTAATGTTTG+GGG | 0.595733 | 7.4:+30031229 | MS.gene96085:CDS |
| GACTGTGATATAAGAAGTGA+AGG | 0.596672 | 7.4:+30038231 | MS.gene96085:CDS |
| TGGAGTCGTAGGTGGAACCT+CGG | 0.601679 | 7.4:+30038086 | MS.gene96085:CDS |
| TGATTGTATCTCCTCAGTAG+TGG | 0.602227 | 7.4:-30037974 | None:intergenic |
| AGAAAGAGAAATGTGTGTGC+TGG | 0.602876 | 7.4:+30036601 | MS.gene96085:CDS |
| ATCTTCTAGAGTTCTCTGCA+TGG | 0.603568 | 7.4:-30038028 | None:intergenic |
| CCACAGTAACAATGTTGCCA+AGG | 0.606836 | 7.4:+30038131 | MS.gene96085:CDS |
| AGATACTCAAAAGACTATTG+AGG | 0.612733 | 7.4:+30038608 | MS.gene96085:CDS |
| GTAGATATGGATGGAGTCGT+AGG | 0.616681 | 7.4:+30038075 | MS.gene96085:CDS |
| GGCACAACAGCTATGATGGA+AGG | 0.616762 | 7.4:+30038363 | MS.gene96085:CDS |
| TGAAGATGCTGCTTGTCGAG+AGG | 0.618982 | 7.4:+30038908 | MS.gene96085:CDS |
| TTCATGTTACCATGCTGAGG+AGG | 0.620017 | 7.4:-30032668 | None:intergenic |
| AGTGACACTGGCGATGATGA+TGG | 0.623013 | 7.4:+30038975 | MS.gene96085:CDS |
| CACGGTGTTAGAGATTGTGT+TGG | 0.623995 | 7.4:+30038321 | MS.gene96085:CDS |
| AGTACTGCAAGCCCAGCTAG+CGG | 0.624346 | 7.4:-30038688 | None:intergenic |
| GAGGAGGTTAAAAGGTGCCA+GGG | 0.625120 | 7.4:+30037524 | MS.gene96085:CDS |
| GAAAGAGCTTGAGAGCGAGA+AGG | 0.625683 | 7.4:+30036967 | MS.gene96085:CDS |
| GATATGGATGGAGTCGTAGG+TGG | 0.626616 | 7.4:+30038078 | MS.gene96085:CDS |
| GACACCCTGAGTTTCTTCAT+CGG | 0.628971 | 7.4:-30039027 | None:intergenic |
| AAGCCTTCAAAGATCTAACT+CGG | 0.629170 | 7.4:+30034389 | MS.gene96085:CDS |
| AATCAATCAATCAATGGCGA+TGG | 0.630111 | 7.4:+30031060 | None:intergenic |
| TTTGCGGCTCCTCCTCAGCA+TGG | 0.630396 | 7.4:+30032659 | MS.gene96085:CDS |
| AAATGGAACTTACCTTAACT+GGG | 0.631342 | 7.4:+30032580 | MS.gene96085:CDS |
| ACTGAGAGTTGTAGTGACAC+TGG | 0.633200 | 7.4:+30038963 | MS.gene96085:CDS |
| GTCGAGGAGGATCAAAAGCA+GGG | 0.635450 | 7.4:+30039056 | MS.gene96085:CDS |
| TTAGGATCAGAATTGTGAAG+AGG | 0.635517 | 7.4:-30031220 | None:intergenic |
| AAGTCAGAACCATACCAGCT+TGG | 0.635856 | 7.4:-30036639 | None:intergenic |
| CGAGAGGGAGAAGACCATAG+TGG | 0.640161 | 7.4:+30038924 | MS.gene96085:CDS |
| TGTTCATAGAGCGCAGTCTG+AGG | 0.642720 | 7.4:+30036406 | MS.gene96085:CDS |
| GAATTCATGTTACCATGCTG+AGG | 0.645911 | 7.4:-30032671 | None:intergenic |
| CAAGGATGGTCCTTTAGAAG+GGG | 0.646979 | 7.4:+30038461 | MS.gene96085:CDS |
| GAAGACCTTAACGAAAGACT+TGG | 0.650257 | 7.4:+30034947 | MS.gene96085:CDS |
| TCAGGGTGTCGACCATGTCG+AGG | 0.655020 | 7.4:+30039040 | MS.gene96085:CDS |
| AAGAACAATTAGATGAAGAG+CGG | 0.659624 | 7.4:+30036333 | MS.gene96085:CDS |
| GAATGATTCAAATATTGTGG+TGG | 0.662662 | 7.4:+30038779 | MS.gene96085:CDS |
| TATGATGGAAGGAGATACTG+TGG | 0.663898 | 7.4:+30038374 | MS.gene96085:CDS |
| GGTGCATGTTTCAAATCCTG+TGG | 0.667295 | 7.4:+30033743 | MS.gene96085:CDS |
| GGGTGTCGACCATGTCGAGG+AGG | 0.674979 | 7.4:+30039043 | MS.gene96085:CDS |
| ACCAGTGCTGATCATGACCA+CGG | 0.679676 | 7.4:+30038303 | MS.gene96085:CDS |
| ATGGAGGAAGAGAAAACCCG+CGG | 0.696453 | 7.4:+30031079 | MS.gene96085:CDS |
| ATGATGGAAGGAGATACTGT+GGG | 0.698329 | 7.4:+30038375 | MS.gene96085:CDS |
| AAAGCAATTGGAGAGTCAGG+TGG | 0.698986 | 7.4:+30034507 | MS.gene96085:CDS |
| ATATCCGATGAAGAAACTCA+GGG | 0.704443 | 7.4:+30039023 | MS.gene96085:CDS |
| GGAACTAGGAGATGTCAACA+GGG | 0.715937 | 7.4:+30034898 | MS.gene96085:CDS |
| TGTTGTGAAAGTTCACGACA+AGG | 0.722117 | 7.4:-30038564 | None:intergenic |
| CAAATGATATAATATCACCA+TGG | 0.723685 | 7.4:-30032640 | None:intergenic |
| CAACACAATCTCTAACACCG+TGG | 0.778065 | 7.4:-30038320 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 30031073 | 30039127 | 30031073 | ID=MS.gene96085 |
| chr7.4 | mRNA | 30031073 | 30039127 | 30031073 | ID=MS.gene96085.t1;Parent=MS.gene96085 |
| chr7.4 | exon | 30031073 | 30031294 | 30031073 | ID=MS.gene96085.t1.exon1;Parent=MS.gene96085.t1 |
| chr7.4 | CDS | 30031073 | 30031294 | 30031073 | ID=cds.MS.gene96085.t1;Parent=MS.gene96085.t1 |
| chr7.4 | exon | 30032288 | 30032460 | 30032288 | ID=MS.gene96085.t1.exon2;Parent=MS.gene96085.t1 |
| chr7.4 | CDS | 30032288 | 30032460 | 30032288 | ID=cds.MS.gene96085.t1;Parent=MS.gene96085.t1 |
| chr7.4 | exon | 30032577 | 30032680 | 30032577 | ID=MS.gene96085.t1.exon3;Parent=MS.gene96085.t1 |
| chr7.4 | CDS | 30032577 | 30032680 | 30032577 | ID=cds.MS.gene96085.t1;Parent=MS.gene96085.t1 |
| chr7.4 | exon | 30033715 | 30033795 | 30033715 | ID=MS.gene96085.t1.exon4;Parent=MS.gene96085.t1 |
| chr7.4 | CDS | 30033715 | 30033795 | 30033715 | ID=cds.MS.gene96085.t1;Parent=MS.gene96085.t1 |
| chr7.4 | exon | 30034307 | 30034410 | 30034307 | ID=MS.gene96085.t1.exon5;Parent=MS.gene96085.t1 |
| chr7.4 | CDS | 30034307 | 30034410 | 30034307 | ID=cds.MS.gene96085.t1;Parent=MS.gene96085.t1 |
| chr7.4 | exon | 30034499 | 30034585 | 30034499 | ID=MS.gene96085.t1.exon6;Parent=MS.gene96085.t1 |
| chr7.4 | CDS | 30034499 | 30034585 | 30034499 | ID=cds.MS.gene96085.t1;Parent=MS.gene96085.t1 |
| chr7.4 | exon | 30034812 | 30035014 | 30034812 | ID=MS.gene96085.t1.exon7;Parent=MS.gene96085.t1 |
| chr7.4 | CDS | 30034812 | 30035014 | 30034812 | ID=cds.MS.gene96085.t1;Parent=MS.gene96085.t1 |
| chr7.4 | exon | 30036307 | 30036508 | 30036307 | ID=MS.gene96085.t1.exon8;Parent=MS.gene96085.t1 |
| chr7.4 | CDS | 30036307 | 30036508 | 30036307 | ID=cds.MS.gene96085.t1;Parent=MS.gene96085.t1 |
| chr7.4 | exon | 30036596 | 30036646 | 30036596 | ID=MS.gene96085.t1.exon9;Parent=MS.gene96085.t1 |
| chr7.4 | CDS | 30036596 | 30036646 | 30036596 | ID=cds.MS.gene96085.t1;Parent=MS.gene96085.t1 |
| chr7.4 | exon | 30036740 | 30036838 | 30036740 | ID=MS.gene96085.t1.exon10;Parent=MS.gene96085.t1 |
| chr7.4 | CDS | 30036740 | 30036838 | 30036740 | ID=cds.MS.gene96085.t1;Parent=MS.gene96085.t1 |
| chr7.4 | exon | 30036929 | 30036988 | 30036929 | ID=MS.gene96085.t1.exon11;Parent=MS.gene96085.t1 |
| chr7.4 | CDS | 30036929 | 30036988 | 30036929 | ID=cds.MS.gene96085.t1;Parent=MS.gene96085.t1 |
| chr7.4 | exon | 30037438 | 30037562 | 30037438 | ID=MS.gene96085.t1.exon12;Parent=MS.gene96085.t1 |
| chr7.4 | CDS | 30037438 | 30037562 | 30037438 | ID=cds.MS.gene96085.t1;Parent=MS.gene96085.t1 |
| chr7.4 | exon | 30037948 | 30039127 | 30037948 | ID=MS.gene96085.t1.exon13;Parent=MS.gene96085.t1 |
| chr7.4 | CDS | 30037948 | 30039127 | 30037948 | ID=cds.MS.gene96085.t1;Parent=MS.gene96085.t1 |
| Gene Sequence |
| Protein sequence |
