Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97600.t1 | XP_003621331.1 | 91.6 | 369 | 29 | 2 | 1 | 369 | 1 | 367 | 5.50E-194 | 686.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97600.t1 | P93324 | 62.7 | 375 | 128 | 6 | 2 | 369 | 3 | 372 | 2.2e-127 | 456.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97600.t1 | G7L359 | 91.6 | 369 | 29 | 2 | 1 | 369 | 1 | 367 | 4.0e-194 | 686.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049549 | MS.gene97600 | 0.804954 | 1.69E-49 | -1.69E-46 |
MS.gene05104 | MS.gene97600 | 0.802927 | 4.45E-49 | -1.69E-46 |
MS.gene051131 | MS.gene97600 | 0.807486 | 4.94E-50 | -1.69E-46 |
MS.gene051138 | MS.gene97600 | 0.819019 | 1.45E-52 | -1.69E-46 |
MS.gene051364 | MS.gene97600 | 0.802521 | 5.39E-49 | -1.69E-46 |
MS.gene051366 | MS.gene97600 | 0.804421 | 2.18E-49 | -1.69E-46 |
MS.gene051651 | MS.gene97600 | 0.809829 | 1.56E-50 | -1.69E-46 |
MS.gene05240 | MS.gene97600 | 0.803128 | 4.04E-49 | -1.69E-46 |
MS.gene053488 | MS.gene97600 | 0.808115 | 3.63E-50 | -1.69E-46 |
MS.gene053887 | MS.gene97600 | 0.845452 | 4.03E-59 | -1.69E-46 |
MS.gene055942 | MS.gene97600 | 0.816298 | 5.94E-52 | -1.69E-46 |
MS.gene056224 | MS.gene97600 | 0.832465 | 9.31E-56 | -1.69E-46 |
MS.gene056590 | MS.gene97600 | 0.808048 | 3.75E-50 | -1.69E-46 |
MS.gene056591 | MS.gene97600 | 0.804047 | 2.61E-49 | -1.69E-46 |
MS.gene056697 | MS.gene97600 | 0.803393 | 3.56E-49 | -1.69E-46 |
MS.gene056748 | MS.gene97600 | 0.806035 | 1.00E-49 | -1.69E-46 |
MS.gene056856 | MS.gene97600 | 0.824924 | 6.20E-54 | -1.69E-46 |
MS.gene057261 | MS.gene97600 | 0.800266 | 1.56E-48 | -1.69E-46 |
MS.gene057547 | MS.gene97600 | 0.814977 | 1.17E-51 | -1.69E-46 |
MS.gene057548 | MS.gene97600 | 0.965945 | 2.88E-125 | -1.69E-46 |
MS.gene057549 | MS.gene97600 | 0.853821 | 1.85E-61 | -1.69E-46 |
MS.gene058068 | MS.gene97600 | 0.807874 | 4.08E-50 | -1.69E-46 |
MS.gene058093 | MS.gene97600 | 0.804553 | 2.04E-49 | -1.69E-46 |
MS.gene058099 | MS.gene97600 | 0.835537 | 1.58E-56 | -1.69E-46 |
MS.gene058450 | MS.gene97600 | 0.801937 | 7.11E-49 | -1.69E-46 |
MS.gene058603 | MS.gene97600 | 0.819238 | 1.29E-52 | -1.69E-46 |
MS.gene060405 | MS.gene97600 | 0.813302 | 2.74E-51 | -1.69E-46 |
MS.gene061044 | MS.gene97600 | 0.814416 | 1.56E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97600.t1 | MTR_7g011990 | 91.599 | 369 | 29 | 2 | 1 | 369 | 1 | 367 | 0.0 | 699 |
MS.gene97600.t1 | MTR_7g011900 | 78.075 | 374 | 73 | 5 | 1 | 369 | 1 | 370 | 0.0 | 598 |
MS.gene97600.t1 | MTR_7g012020 | 71.968 | 371 | 97 | 4 | 3 | 369 | 2 | 369 | 0.0 | 556 |
MS.gene97600.t1 | MTR_7g012040 | 73.046 | 371 | 92 | 4 | 3 | 369 | 2 | 368 | 0.0 | 554 |
MS.gene97600.t1 | MTR_7g012070 | 67.196 | 378 | 112 | 5 | 1 | 369 | 1 | 375 | 0.0 | 518 |
MS.gene97600.t1 | MTR_7g012090 | 67.460 | 378 | 111 | 5 | 1 | 369 | 1 | 375 | 0.0 | 517 |
MS.gene97600.t1 | MTR_2g055940 | 65.775 | 374 | 112 | 6 | 1 | 369 | 1 | 363 | 1.38e-177 | 498 |
MS.gene97600.t1 | MTR_1g096310 | 62.667 | 375 | 128 | 6 | 2 | 369 | 3 | 372 | 3.02e-166 | 469 |
MS.gene97600.t1 | MTR_7g012020 | 73.285 | 277 | 67 | 4 | 3 | 275 | 2 | 275 | 8.21e-146 | 415 |
MS.gene97600.t1 | MTR_7g012020 | 75.200 | 250 | 57 | 2 | 3 | 248 | 2 | 250 | 1.30e-137 | 392 |
MS.gene97600.t1 | MTR_1g036460 | 49.733 | 374 | 173 | 8 | 5 | 369 | 3 | 370 | 5.07e-126 | 367 |
MS.gene97600.t1 | MTR_1g036490 | 48.396 | 374 | 178 | 8 | 5 | 369 | 3 | 370 | 1.41e-124 | 363 |
MS.gene97600.t1 | MTR_3g021440 | 52.542 | 354 | 158 | 7 | 21 | 369 | 22 | 370 | 4.45e-118 | 347 |
MS.gene97600.t1 | MTR_3g021430 | 53.107 | 354 | 156 | 7 | 21 | 369 | 9 | 357 | 1.46e-117 | 345 |
MS.gene97600.t1 | MTR_1g036510 | 50.140 | 357 | 164 | 7 | 22 | 369 | 33 | 384 | 8.28e-116 | 342 |
MS.gene97600.t1 | MTR_3g092900 | 45.753 | 365 | 185 | 9 | 10 | 369 | 7 | 363 | 3.65e-101 | 303 |
MS.gene97600.t1 | MTR_5g098170 | 40.833 | 360 | 196 | 10 | 19 | 369 | 12 | 363 | 2.47e-86 | 266 |
MS.gene97600.t1 | MTR_7g118300 | 40.811 | 370 | 207 | 9 | 5 | 369 | 13 | 375 | 1.15e-85 | 264 |
MS.gene97600.t1 | MTR_0591s0010 | 40.947 | 359 | 198 | 10 | 19 | 369 | 25 | 377 | 1.37e-84 | 261 |
MS.gene97600.t1 | MTR_7g118320 | 40.947 | 359 | 198 | 9 | 19 | 369 | 10 | 362 | 1.28e-81 | 253 |
MS.gene97600.t1 | MTR_1g050220 | 42.900 | 331 | 130 | 7 | 26 | 349 | 6 | 284 | 3.19e-80 | 248 |
MS.gene97600.t1 | MTR_8g068690 | 39.554 | 359 | 203 | 10 | 19 | 369 | 24 | 376 | 8.24e-79 | 247 |
MS.gene97600.t1 | MTR_8g068750 | 38.997 | 359 | 205 | 10 | 19 | 369 | 25 | 377 | 1.86e-78 | 246 |
MS.gene97600.t1 | MTR_1g036510 | 51.163 | 258 | 113 | 6 | 22 | 271 | 33 | 285 | 4.74e-76 | 237 |
MS.gene97600.t1 | MTR_8g068870 | 39.181 | 342 | 195 | 8 | 35 | 369 | 28 | 363 | 1.25e-74 | 235 |
MS.gene97600.t1 | MTR_6g060290 | 62.162 | 185 | 51 | 4 | 1 | 181 | 1 | 170 | 2.44e-70 | 218 |
MS.gene97600.t1 | MTR_1g036510 | 49.367 | 237 | 109 | 4 | 22 | 250 | 33 | 266 | 1.38e-67 | 214 |
MS.gene97600.t1 | MTR_8g068570 | 39.264 | 326 | 158 | 9 | 19 | 336 | 25 | 318 | 5.55e-67 | 214 |
MS.gene97600.t1 | MTR_6g078850 | 38.936 | 357 | 203 | 10 | 21 | 368 | 32 | 382 | 6.84e-65 | 214 |
MS.gene97600.t1 | MTR_8g024160 | 42.857 | 266 | 145 | 6 | 105 | 369 | 69 | 328 | 1.51e-64 | 208 |
MS.gene97600.t1 | MTR_2g072790 | 38.532 | 327 | 182 | 11 | 33 | 350 | 20 | 336 | 6.86e-59 | 194 |
MS.gene97600.t1 | MTR_8g068730 | 34.349 | 361 | 187 | 12 | 19 | 369 | 25 | 345 | 1.60e-54 | 183 |
MS.gene97600.t1 | MTR_3g096050 | 35.294 | 357 | 203 | 13 | 26 | 369 | 17 | 358 | 4.03e-52 | 177 |
MS.gene97600.t1 | MTR_8g068690 | 39.313 | 262 | 147 | 8 | 19 | 273 | 24 | 280 | 3.38e-51 | 172 |
MS.gene97600.t1 | MTR_3g096070 | 35.000 | 340 | 175 | 13 | 26 | 354 | 17 | 321 | 1.82e-48 | 167 |
MS.gene97600.t1 | MTR_3g083620 | 33.230 | 322 | 197 | 11 | 39 | 354 | 38 | 347 | 9.07e-46 | 160 |
MS.gene97600.t1 | MTR_1g076940 | 30.841 | 321 | 209 | 6 | 41 | 354 | 33 | 347 | 4.62e-45 | 159 |
MS.gene97600.t1 | MTR_0017s0100 | 33.642 | 324 | 194 | 13 | 41 | 355 | 44 | 355 | 7.42e-45 | 158 |
MS.gene97600.t1 | MTR_0079s0070 | 33.028 | 327 | 192 | 13 | 41 | 355 | 10 | 321 | 8.41e-43 | 152 |
MS.gene97600.t1 | MTR_8g068600 | 36.434 | 258 | 145 | 8 | 46 | 289 | 27 | 279 | 1.01e-42 | 150 |
MS.gene97600.t1 | MTR_4g038440 | 32.923 | 325 | 195 | 13 | 41 | 355 | 44 | 355 | 1.61e-42 | 152 |
MS.gene97600.t1 | MTR_4g033015 | 32.754 | 345 | 202 | 12 | 40 | 368 | 32 | 362 | 6.09e-41 | 147 |
MS.gene97600.t1 | MTR_4g033200 | 32.464 | 345 | 203 | 12 | 40 | 368 | 32 | 362 | 4.01e-40 | 145 |
MS.gene97600.t1 | MTR_5g074600 | 28.662 | 314 | 204 | 11 | 65 | 368 | 55 | 358 | 1.69e-38 | 141 |
MS.gene97600.t1 | MTR_7g014570 | 28.443 | 334 | 218 | 9 | 41 | 368 | 33 | 351 | 6.56e-38 | 139 |
MS.gene97600.t1 | MTR_3g096050 | 38.431 | 255 | 136 | 11 | 26 | 271 | 17 | 259 | 1.33e-37 | 136 |
MS.gene97600.t1 | MTR_4g033150 | 30.725 | 345 | 209 | 12 | 40 | 368 | 32 | 362 | 1.86e-37 | 138 |
MS.gene97600.t1 | MTR_4g088345 | 29.118 | 340 | 218 | 12 | 38 | 368 | 30 | 355 | 6.07e-37 | 137 |
MS.gene97600.t1 | MTR_4g088340 | 27.434 | 339 | 225 | 9 | 38 | 368 | 7 | 332 | 9.59e-37 | 136 |
MS.gene97600.t1 | MTR_4g088200 | 29.909 | 331 | 215 | 10 | 34 | 355 | 26 | 348 | 1.94e-36 | 135 |
MS.gene97600.t1 | MTR_8g068740 | 32.482 | 274 | 141 | 9 | 19 | 285 | 25 | 261 | 3.33e-36 | 133 |
MS.gene97600.t1 | MTR_5g074680 | 28.391 | 317 | 211 | 10 | 58 | 368 | 53 | 359 | 1.36e-35 | 133 |
MS.gene97600.t1 | MTR_7g024500 | 29.044 | 272 | 177 | 8 | 81 | 349 | 73 | 331 | 1.73e-35 | 133 |
MS.gene97600.t1 | MTR_7g024520 | 28.881 | 277 | 181 | 8 | 81 | 354 | 73 | 336 | 4.51e-35 | 132 |
MS.gene97600.t1 | MTR_5g074580 | 31.557 | 244 | 159 | 6 | 130 | 368 | 119 | 359 | 1.32e-34 | 130 |
MS.gene97600.t1 | MTR_7g014510 | 27.362 | 307 | 207 | 9 | 66 | 368 | 62 | 356 | 1.43e-34 | 130 |
MS.gene97600.t1 | MTR_5g074540 | 32.068 | 237 | 153 | 5 | 137 | 368 | 107 | 340 | 1.59e-32 | 125 |
MS.gene97600.t1 | MTR_4g088190 | 30.473 | 338 | 207 | 10 | 34 | 355 | 26 | 351 | 3.16e-32 | 124 |
MS.gene97600.t1 | MTR_4g079160 | 35.354 | 198 | 122 | 4 | 162 | 355 | 147 | 342 | 3.51e-32 | 124 |
MS.gene97600.t1 | MTR_8g068620 | 50.893 | 112 | 53 | 2 | 161 | 272 | 2 | 111 | 4.70e-30 | 112 |
MS.gene97600.t1 | MTR_1g076930 | 30.672 | 238 | 154 | 5 | 38 | 271 | 7 | 237 | 1.58e-29 | 114 |
MS.gene97600.t1 | MTR_4g033170 | 28.698 | 338 | 219 | 11 | 40 | 368 | 32 | 356 | 2.30e-27 | 111 |
MS.gene97600.t1 | MTR_5g074610 | 34.118 | 170 | 106 | 4 | 202 | 368 | 159 | 325 | 2.84e-26 | 107 |
MS.gene97600.t1 | MTR_4g033085 | 28.107 | 338 | 221 | 11 | 40 | 368 | 32 | 356 | 2.70e-25 | 105 |
MS.gene97600.t1 | MTR_4g038440 | 30.833 | 240 | 144 | 10 | 41 | 271 | 44 | 270 | 1.33e-20 | 90.9 |
MS.gene97600.t1 | MTR_0794s0020 | 29.032 | 217 | 132 | 7 | 40 | 244 | 32 | 238 | 7.79e-20 | 88.2 |
MS.gene97600.t1 | MTR_8g068760 | 41.000 | 100 | 57 | 2 | 271 | 369 | 135 | 233 | 2.64e-18 | 83.6 |
MS.gene97600.t1 | MTR_6g060280 | 55.556 | 72 | 26 | 3 | 221 | 288 | 1 | 70 | 1.51e-15 | 71.2 |
MS.gene97600.t1 | MTR_8g068580 | 42.391 | 92 | 51 | 2 | 279 | 369 | 43 | 133 | 4.82e-15 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97600.t1 | AT5G54160 | 46.857 | 350 | 178 | 6 | 15 | 361 | 10 | 354 | 9.45e-104 | 310 |
MS.gene97600.t1 | AT1G51990 | 37.465 | 355 | 210 | 6 | 21 | 368 | 12 | 361 | 3.46e-78 | 244 |
MS.gene97600.t1 | AT1G77520 | 39.776 | 357 | 198 | 11 | 25 | 369 | 30 | 381 | 1.12e-77 | 244 |
MS.gene97600.t1 | AT1G51990 | 37.465 | 355 | 210 | 6 | 21 | 368 | 12 | 361 | 1.14e-77 | 243 |
MS.gene97600.t1 | AT1G33030 | 38.028 | 355 | 207 | 11 | 21 | 369 | 3 | 350 | 3.20e-71 | 226 |
MS.gene97600.t1 | AT1G63140 | 40.110 | 364 | 195 | 14 | 21 | 369 | 26 | 381 | 6.84e-70 | 224 |
MS.gene97600.t1 | AT1G63140 | 40.110 | 364 | 195 | 14 | 21 | 369 | 46 | 401 | 8.85e-70 | 224 |
MS.gene97600.t1 | AT1G21100 | 41.341 | 358 | 191 | 11 | 14 | 359 | 14 | 364 | 2.31e-69 | 222 |
MS.gene97600.t1 | AT1G21130 | 41.311 | 351 | 187 | 11 | 21 | 359 | 21 | 364 | 1.79e-68 | 220 |
MS.gene97600.t1 | AT1G21110 | 41.061 | 358 | 192 | 11 | 14 | 359 | 14 | 364 | 3.80e-67 | 216 |
MS.gene97600.t1 | AT5G53810 | 39.244 | 344 | 193 | 9 | 38 | 369 | 39 | 378 | 1.13e-66 | 216 |
MS.gene97600.t1 | AT1G21120 | 40.503 | 358 | 194 | 11 | 14 | 359 | 14 | 364 | 5.66e-66 | 213 |
MS.gene97600.t1 | AT1G77530 | 38.655 | 357 | 202 | 11 | 25 | 369 | 30 | 381 | 1.75e-65 | 213 |
MS.gene97600.t1 | AT1G21120 | 40.741 | 351 | 189 | 11 | 21 | 359 | 69 | 412 | 3.73e-65 | 213 |
MS.gene97600.t1 | AT1G76790 | 38.235 | 374 | 197 | 13 | 17 | 369 | 5 | 365 | 3.36e-61 | 201 |
MS.gene97600.t1 | AT3G53140 | 36.765 | 340 | 186 | 12 | 26 | 349 | 14 | 340 | 2.90e-56 | 188 |
MS.gene97600.t1 | AT1G62900 | 46.341 | 205 | 105 | 5 | 167 | 369 | 4 | 205 | 3.00e-54 | 178 |
MS.gene97600.t1 | AT5G37170 | 35.714 | 322 | 162 | 12 | 57 | 369 | 49 | 334 | 6.13e-49 | 168 |
MS.gene97600.t1 | AT5G37170 | 43.000 | 200 | 108 | 6 | 173 | 369 | 38 | 234 | 4.83e-46 | 157 |
MS.gene97600.t1 | AT1G33030 | 37.066 | 259 | 152 | 9 | 21 | 274 | 3 | 255 | 1.51e-43 | 152 |
MS.gene97600.t1 | AT5G37170 | 42.857 | 189 | 102 | 6 | 184 | 369 | 1 | 186 | 6.75e-43 | 147 |
MS.gene97600.t1 | AT1G33030 | 37.109 | 256 | 150 | 9 | 21 | 271 | 3 | 252 | 2.51e-42 | 149 |
MS.gene97600.t1 | AT1G21130 | 41.155 | 277 | 140 | 10 | 5 | 271 | 11 | 274 | 1.81e-41 | 147 |
MS.gene97600.t1 | AT1G63140 | 39.394 | 264 | 140 | 11 | 21 | 271 | 46 | 302 | 8.91e-40 | 143 |
MS.gene97600.t1 | AT4G35160 | 32.432 | 333 | 199 | 12 | 39 | 354 | 44 | 367 | 3.26e-36 | 135 |
MS.gene97600.t1 | AT4G35150 | 38.830 | 188 | 103 | 7 | 177 | 354 | 125 | 310 | 9.19e-36 | 133 |
MS.gene97600.t1 | AT1G77530 | 36.752 | 234 | 136 | 6 | 25 | 248 | 30 | 261 | 2.13e-33 | 125 |
MS.gene97600.t1 | AT1G63140 | 38.136 | 236 | 128 | 9 | 21 | 243 | 46 | 276 | 1.62e-32 | 123 |
Find 77 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCTAAAGAATATGAAATTT+TGG | 0.154985 | 7.4:+87374477 | MS.gene97600:CDS |
TCATTGATTTGTTGAATATT+TGG | 0.166485 | 7.4:-87373177 | None:intergenic |
GACCTATTCAAGAGAGTTAA+TGG | 0.217823 | 7.4:+87373112 | MS.gene97600:CDS |
TGTTGTGCTTTCTCCGTTAT+TGG | 0.235040 | 7.4:+87374535 | MS.gene97600:CDS |
CACAAAGCTTTGCCTCAAAA+TGG | 0.243448 | 7.4:+87374337 | MS.gene97600:CDS |
CTGGATGCATTTGTTGGTTC+TGG | 0.255940 | 7.4:-87374397 | None:intergenic |
CATGGTACTAGGTGCCAATT+TGG | 0.262380 | 7.4:+87370428 | MS.gene97600:CDS |
CTCAACTTGTTTGAAATCAT+TGG | 0.292345 | 7.4:+87370483 | MS.gene97600:CDS |
ATGTGTCACCCTGCTTTGAT+AGG | 0.308455 | 7.4:+87370744 | MS.gene97600:CDS |
GTTCACTTTGTCATTGGAAT+AGG | 0.323507 | 7.4:-87370352 | None:intergenic |
AAATTGATTCCCTTAATTGA+TGG | 0.325335 | 7.4:-87373325 | None:intergenic |
GATACCAACCTTAAGCATTA+TGG | 0.328993 | 7.4:-87374142 | None:intergenic |
AACATACGGTCAAGCCGATT+TGG | 0.331158 | 7.4:-87370567 | None:intergenic |
CGTATCCTTTGTATATTTCA+AGG | 0.331846 | 7.4:-87373231 | None:intergenic |
AACATGGTTCACTTTGTCAT+TGG | 0.374912 | 7.4:-87370358 | None:intergenic |
TTCCATTAACTCTCTTGAAT+AGG | 0.377289 | 7.4:-87373114 | None:intergenic |
TATAGGCTGTATGTCATAAT+TGG | 0.383617 | 7.4:+87374278 | MS.gene97600:intron |
AACTGCAGGGAAAACCAAAT+TGG | 0.383917 | 7.4:-87370442 | None:intergenic |
AACACTCTGATTTGCCAAAT+CGG | 0.383968 | 7.4:+87370553 | MS.gene97600:CDS |
AATAGTGATCATGGTTATCT+TGG | 0.384090 | 7.4:+87370705 | MS.gene97600:CDS |
GTCTCATTGTCATCTATTTG+TGG | 0.384436 | 7.4:-87370396 | None:intergenic |
TTCAACAAATCAATGACTAA+TGG | 0.387609 | 7.4:+87373184 | MS.gene97600:CDS |
CTCTTGAATAGGTCAATCTC+TGG | 0.389759 | 7.4:-87373103 | None:intergenic |
GTTGATGTTGGAGGTGGAAA+TGG | 0.399088 | 7.4:+87373271 | MS.gene97600:CDS |
CACAATGCTGCCATCATCAT+TGG | 0.400435 | 7.4:-87370634 | None:intergenic |
ATCAATAATTGAAACAAGTC+TGG | 0.402872 | 7.4:-87374416 | None:intergenic |
TGTTTATAGGTTAAATTTCA+AGG | 0.442253 | 7.4:+87373066 | MS.gene97600:intron |
ACACTCTCTGCCATGGTACT+AGG | 0.442707 | 7.4:+87370417 | MS.gene97600:CDS |
CTCTTCTGTCTATTTCTACT+CGG | 0.445033 | 7.4:+87370610 | MS.gene97600:CDS |
TAACTTTGAAGCAATTTCAA+TGG | 0.448818 | 7.4:-87370523 | None:intergenic |
TTGAATATTTGGTTTACTTG+TGG | 0.449932 | 7.4:-87373166 | None:intergenic |
AGGAGATGCCATAATGCTTA+AGG | 0.460184 | 7.4:+87374134 | MS.gene97600:CDS |
GCAAATGCATCACCCATTCC+AGG | 0.476737 | 7.4:+87373367 | MS.gene97600:CDS |
GTATCAACTTTGGTTGATGT+TGG | 0.478071 | 7.4:+87373259 | MS.gene97600:CDS |
GGCAAATCAGAGTGTTGAGT+TGG | 0.494514 | 7.4:-87370546 | None:intergenic |
AAGAAATAGAGTACCTGGAA+TGG | 0.504208 | 7.4:-87373380 | None:intergenic |
AGAAATAGAGTACCTGGAAT+GGG | 0.507532 | 7.4:-87373379 | None:intergenic |
TTGTTTGAAATCATTGGTGA+TGG | 0.517050 | 7.4:+87370489 | MS.gene97600:CDS |
TGTGTCACCCTGCTTTGATA+GGG | 0.518341 | 7.4:+87370745 | MS.gene97600:CDS |
TACCACAACCCTATCAAAGC+AGG | 0.522755 | 7.4:-87370753 | None:intergenic |
ACCCTGCTTTGATAGGGTTG+TGG | 0.524365 | 7.4:+87370751 | MS.gene97600:CDS |
TCTCATTGTCATCTATTTGT+GGG | 0.525324 | 7.4:-87370395 | None:intergenic |
CAAATTGGCACCTAGTACCA+TGG | 0.530083 | 7.4:-87370427 | None:intergenic |
ATTGCAGCATTAAGAACTGC+AGG | 0.530129 | 7.4:-87370456 | None:intergenic |
AAATGGAAAGGTCATTCTTG+TGG | 0.531493 | 7.4:+87374354 | MS.gene97600:CDS |
AATTTCCATCACTCCAATAA+CGG | 0.532599 | 7.4:-87374548 | None:intergenic |
ACAAGTCTGGATGCATTTGT+TGG | 0.533931 | 7.4:-87374403 | None:intergenic |
AATAACTAAGTATGAGTACA+TGG | 0.535376 | 7.4:+87373135 | MS.gene97600:CDS |
GGGATGATTGAGCATGTTGG+AGG | 0.536413 | 7.4:+87374084 | MS.gene97600:intron |
ATCATGTTCATTAATGCTGG+TGG | 0.543605 | 7.4:+87374442 | MS.gene97600:CDS |
ACTTTGGTTGATGTTGGAGG+TGG | 0.546949 | 7.4:+87373265 | MS.gene97600:CDS |
TATGATGAAAATAGTGATCA+TGG | 0.549928 | 7.4:+87370696 | MS.gene97600:CDS |
TCAACTTTGGTTGATGTTGG+AGG | 0.553019 | 7.4:+87373262 | MS.gene97600:CDS |
AATATCATGTTCATTAATGC+TGG | 0.556116 | 7.4:+87374439 | MS.gene97600:CDS |
TTTCTCCGTTATTGGAGTGA+TGG | 0.563718 | 7.4:+87374543 | MS.gene97600:CDS |
GGCTGTATGTCATAATTGGT+CGG | 0.567985 | 7.4:+87374282 | MS.gene97600:intron |
TCTACTCGGACCAATGATGA+TGG | 0.574226 | 7.4:+87370624 | MS.gene97600:CDS |
TAGCAAAAGTATTTACCAGA+AGG | 0.577256 | 7.4:-87370675 | None:intergenic |
ATACGAGGGAGTATCAACTT+TGG | 0.580991 | 7.4:+87373249 | MS.gene97600:CDS |
GATGCATTTGCAATCACTTG+AGG | 0.582930 | 7.4:-87373355 | None:intergenic |
TTTGAAAGTATTCTTCCACT+AGG | 0.592518 | 7.4:+87374114 | MS.gene97600:CDS |
TTAGGGATGATTGAGCATGT+TGG | 0.592791 | 7.4:+87374081 | MS.gene97600:intron |
GGATGTGAGTTTCCACAACA+TGG | 0.598127 | 7.4:-87370374 | None:intergenic |
AGCTTTGCCTCAAAATGGAA+AGG | 0.610192 | 7.4:+87374342 | MS.gene97600:CDS |
CATTTGCAATCACTTGAGGA+AGG | 0.614558 | 7.4:-87373351 | None:intergenic |
AAAATCCTTGAAATATACAA+AGG | 0.617392 | 7.4:+87373226 | MS.gene97600:CDS |
ATAACTAAGTATGAGTACAT+GGG | 0.617696 | 7.4:+87373136 | MS.gene97600:CDS |
TCTTGAATAGGTCAATCTCT+GGG | 0.618645 | 7.4:-87373102 | None:intergenic |
AGCATTATGGCATCTCCTAG+TGG | 0.621592 | 7.4:-87374129 | None:intergenic |
TTGCTAGCAAGCGTAACATA+CGG | 0.621980 | 7.4:-87370581 | None:intergenic |
TGACAAAGTGAACCATGTTG+TGG | 0.626166 | 7.4:+87370362 | MS.gene97600:CDS |
CAATGAGACACTCTCTGCCA+TGG | 0.626681 | 7.4:+87370410 | MS.gene97600:CDS |
TAACTAAGTATGAGTACATG+GGG | 0.629118 | 7.4:+87373137 | MS.gene97600:CDS |
GAAATATACAAAGGATACGA+GGG | 0.648403 | 7.4:+87373235 | MS.gene97600:CDS |
ACCACAACCCTATCAAAGCA+GGG | 0.658650 | 7.4:-87370752 | None:intergenic |
TTGCAGCATTAAGAACTGCA+GGG | 0.670506 | 7.4:-87370455 | None:intergenic |
TGAAATATACAAAGGATACG+AGG | 0.683728 | 7.4:+87373234 | MS.gene97600:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAAAAAATCAACTAAT+AGG | + | chr7.4:87372981-87373000 | MS.gene97600:intron | 10.0% |
!! | AGTAATAATTTAACTATTAA+TGG | - | chr7.4:87373011-87373030 | None:intergenic | 10.0% |
!! | TAGATTCATATTATAAAATT+TGG | - | chr7.4:87373891-87373910 | None:intergenic | 10.0% |
!! | TTTATAATATGAATCTAAAA+AGG | + | chr7.4:87373894-87373913 | MS.gene97600:intron | 10.0% |
!! | TTTCAATTAATAATAATCTT+GGG | - | chr7.4:87374046-87374065 | None:intergenic | 10.0% |
!!! | ATTTTTTTTAACTTCAATTT+CGG | - | chr7.4:87371683-87371702 | None:intergenic | 10.0% |
!!! | CAATTTTATAATTTGTTTAT+AGG | + | chr7.4:87373053-87373072 | MS.gene97600:intron | 10.0% |
!!! | TTTTCAATTAATAATAATCT+TGG | - | chr7.4:87374047-87374066 | None:intergenic | 10.0% |
!! | AAAATTGACAAATTTCATTT+AGG | + | chr7.4:87374063-87374082 | MS.gene97600:intron | 15.0% |
!! | AAATTGACAAATTTCATTTA+GGG | + | chr7.4:87374064-87374083 | MS.gene97600:intron | 15.0% |
!! | AATAGTTAAATTATTACTTG+AGG | + | chr7.4:87373013-87373032 | MS.gene97600:intron | 15.0% |
!! | ACGAAAAAAAAAATCAATAT+TGG | - | chr7.4:87373517-87373536 | None:intergenic | 15.0% |
!! | TACAATTAAGTTCTATAATT+AGG | + | chr7.4:87372753-87372772 | MS.gene97600:intron | 15.0% |
!! | TTAAGAATTTAGATTGTATA+TGG | - | chr7.4:87371815-87371834 | None:intergenic | 15.0% |
!! | TTTCAAAAAAAAAAATAGTC+TGG | + | chr7.4:87371969-87371988 | MS.gene97600:intron | 15.0% |
!!! | ATATTTTACTAAAATTAGTG+AGG | + | chr7.4:87373933-87373952 | MS.gene97600:intron | 15.0% |
!!! | CAAAATGAACTTTTTAAAAA+AGG | - | chr7.4:87372662-87372681 | None:intergenic | 15.0% |
!!! | TATTTTACTAAAATTAGTGA+GGG | + | chr7.4:87373934-87373953 | MS.gene97600:intron | 15.0% |
!!! | TTACAAAATTCTAAAATCAT+TGG | - | chr7.4:87370830-87370849 | None:intergenic | 15.0% |
!! | AAAATCCTTGAAATATACAA+AGG | + | chr7.4:87373226-87373245 | MS.gene97600:CDS | 20.0% |
!! | AATTGAGTAATTAACTTCTA+TGG | - | chr7.4:87372727-87372746 | None:intergenic | 20.0% |
!! | ACGTTGATATAATATTACAT+CGG | + | chr7.4:87370940-87370959 | MS.gene97600:intron | 20.0% |
!! | ATGAAATTGTTAATTAAGCA+AGG | - | chr7.4:87370800-87370819 | None:intergenic | 20.0% |
!! | GAAAAATATCCATCAATTAA+GGG | + | chr7.4:87373316-87373335 | MS.gene97600:CDS | 20.0% |
!! | TAAATTCATTAATGAAAGTC+TGG | + | chr7.4:87371738-87371757 | MS.gene97600:intron | 20.0% |
!! | TAATTGATTATTAGGAATAG+TGG | + | chr7.4:87371059-87371078 | MS.gene97600:intron | 20.0% |
!! | TACAATATATTAGTCATGAA+GGG | - | chr7.4:87373736-87373755 | None:intergenic | 20.0% |
!! | TACTAGAATGACATATAATT+TGG | - | chr7.4:87374181-87374200 | None:intergenic | 20.0% |
!! | TGAAAAATATCCATCAATTA+AGG | + | chr7.4:87373315-87373334 | MS.gene97600:CDS | 20.0% |
!! | TGTTTATAGGTTAAATTTCA+AGG | + | chr7.4:87373066-87373085 | MS.gene97600:intron | 20.0% |
!! | TTAAAATAATCGTTGAACTA+GGG | - | chr7.4:87374019-87374038 | None:intergenic | 20.0% |
!! | TTCTATAACGTCTAATTAAA+CGG | + | chr7.4:87371498-87371517 | MS.gene97600:intron | 20.0% |
!! | TTGATATCTTAGAGAAAAAT+TGG | - | chr7.4:87373759-87373778 | None:intergenic | 20.0% |
!!! | AGAAATAAGAAATGTTTTGA+GGG | - | chr7.4:87372401-87372420 | None:intergenic | 20.0% |
!!! | CAATTTCTTCAATTTTGTAT+AGG | + | chr7.4:87371022-87371041 | MS.gene97600:intron | 20.0% |
!!! | GATTTTTTTCATGTGAATTT+TGG | - | chr7.4:87373212-87373231 | None:intergenic | 20.0% |
!!! | GTTTAAATTTTTTGCATGTT+AGG | - | chr7.4:87371881-87371900 | None:intergenic | 20.0% |
!!! | TAGAAATAAGAAATGTTTTG+AGG | - | chr7.4:87372402-87372421 | None:intergenic | 20.0% |
!!! | TCATTGATTTGTTGAATATT+TGG | - | chr7.4:87373180-87373199 | None:intergenic | 20.0% |
!!! | TGCTAAAGAATATGAAATTT+TGG | + | chr7.4:87374477-87374496 | MS.gene97600:CDS | 20.0% |
!!! | TTAAAAAGTTCATTTTGTAC+TGG | + | chr7.4:87372665-87372684 | MS.gene97600:intron | 20.0% |
!!! | TTGAGATATGTATTTTGAAA+CGG | + | chr7.4:87371403-87371422 | MS.gene97600:intron | 20.0% |
! | AATAACTAAGTATGAGTACA+TGG | + | chr7.4:87373135-87373154 | MS.gene97600:CDS | 25.0% |
! | AATATCATGTTCATTAATGC+TGG | + | chr7.4:87374439-87374458 | MS.gene97600:CDS | 25.0% |
! | ACTTTACTATTTGGTATTGT+AGG | + | chr7.4:87373630-87373649 | MS.gene97600:intron | 25.0% |
! | AGATTTAAACTTGCAATTCA+TGG | + | chr7.4:87370871-87370890 | MS.gene97600:intron | 25.0% |
! | AGTTTCTTGGTCATATAATA+AGG | - | chr7.4:87373790-87373809 | None:intergenic | 25.0% |
! | ATAACTAAGTATGAGTACAT+GGG | + | chr7.4:87373136-87373155 | MS.gene97600:CDS | 25.0% |
! | ATCAATAATTGAAACAAGTC+TGG | - | chr7.4:87374419-87374438 | None:intergenic | 25.0% |
! | ATTGTTAATTAAGCAAGGTA+AGG | - | chr7.4:87370795-87370814 | None:intergenic | 25.0% |
! | CATTATACGATGAATAATCA+TGG | - | chr7.4:87372865-87372884 | None:intergenic | 25.0% |
! | CCAAAATTAACTTTCTATCA+CGG | + | chr7.4:87372951-87372970 | MS.gene97600:intron | 25.0% |
! | GAGAAAGTAACTTTACTATT+TGG | + | chr7.4:87373621-87373640 | MS.gene97600:intron | 25.0% |
! | GTACAATATATTAGTCATGA+AGG | - | chr7.4:87373737-87373756 | None:intergenic | 25.0% |
! | GTTAAAATAATCGTTGAACT+AGG | - | chr7.4:87374020-87374039 | None:intergenic | 25.0% |
! | TATGATGAAAATAGTGATCA+TGG | + | chr7.4:87370696-87370715 | MS.gene97600:CDS | 25.0% |
! | TATTTGATTCACATGATTCT+AGG | - | chr7.4:87372523-87372542 | None:intergenic | 25.0% |
! | TATTTGGTATTGTAGGTAAA+AGG | + | chr7.4:87373637-87373656 | MS.gene97600:intron | 25.0% |
! | TGATATCATCTACTAGTAAA+AGG | + | chr7.4:87373440-87373459 | MS.gene97600:intron | 25.0% |
! | TTCAACAAATCAATGACTAA+TGG | + | chr7.4:87373184-87373203 | MS.gene97600:CDS | 25.0% |
!! | AAATTGATTCCCTTAATTGA+TGG | - | chr7.4:87373328-87373347 | None:intergenic | 25.0% |
!! | CTCTATTTCTTGAAATAACT+TGG | + | chr7.4:87373392-87373411 | MS.gene97600:intron | 25.0% |
!! | GATGATTCCCAAATATTTTA+GGG | + | chr7.4:87373708-87373727 | MS.gene97600:intron | 25.0% |
!! | TAGTTTGATAACAATTTGCT+TGG | - | chr7.4:87371150-87371169 | None:intergenic | 25.0% |
!! | TGAGAATGTATTAGTTTGAA+GGG | - | chr7.4:87371915-87371934 | None:intergenic | 25.0% |
!! | TGATGATTCCCAAATATTTT+AGG | + | chr7.4:87373707-87373726 | MS.gene97600:intron | 25.0% |
!! | TTACTGGCTAATTGATTATT+AGG | + | chr7.4:87371051-87371070 | MS.gene97600:intron | 25.0% |
!! | TTGAATATTTGGTTTACTTG+TGG | - | chr7.4:87373169-87373188 | None:intergenic | 25.0% |
!! | TTGAGAATGTATTAGTTTGA+AGG | - | chr7.4:87371916-87371935 | None:intergenic | 25.0% |
!!! | ACTCATTTTAGTTAGTTTCT+TGG | - | chr7.4:87373803-87373822 | None:intergenic | 25.0% |
!!! | ATGCGACATGTATTTTAAAA+CGG | - | chr7.4:87371183-87371202 | None:intergenic | 25.0% |
!!! | GAAATAAGAAATGTTTTGAG+GGG | - | chr7.4:87372400-87372419 | None:intergenic | 25.0% |
!!! | TAACTTTGAAGCAATTTCAA+TGG | - | chr7.4:87370526-87370545 | None:intergenic | 25.0% |
!!! | TTCTATGGTTTGATTTTTCT+TGG | - | chr7.4:87372712-87372731 | None:intergenic | 25.0% |
AAACAATCTCCAAACTATGT+TGG | - | chr7.4:87371948-87371967 | None:intergenic | 30.0% | |
AACTATCATACTGATAAGAG+AGG | - | chr7.4:87372831-87372850 | None:intergenic | 30.0% | |
AATAGTGATCATGGTTATCT+TGG | + | chr7.4:87370705-87370724 | MS.gene97600:CDS | 30.0% | |
AATTTCCATCACTCCAATAA+CGG | - | chr7.4:87374551-87374570 | None:intergenic | 30.0% | |
ACATCAGATATTGCCAAAAT+TGG | + | chr7.4:87372275-87372294 | MS.gene97600:intron | 30.0% | |
AGCTTATACAAACCACTAAA+AGG | + | chr7.4:87372239-87372258 | MS.gene97600:intron | 30.0% | |
ATAATAGAGCCAACATAGTT+TGG | + | chr7.4:87371936-87371955 | MS.gene97600:intron | 30.0% | |
ATGAATAATCATGGACAAGA+GGG | - | chr7.4:87372856-87372875 | None:intergenic | 30.0% | |
ATTCATTGTGTGTTCTTTGT+GGG | - | chr7.4:87372628-87372647 | None:intergenic | 30.0% | |
CGTATCCTTTGTATATTTCA+AGG | - | chr7.4:87373234-87373253 | None:intergenic | 30.0% | |
CTCATTAAAATAGTGCTTAC+TGG | + | chr7.4:87374227-87374246 | MS.gene97600:intron | 30.0% | |
GAAATATACAAAGGATACGA+GGG | + | chr7.4:87373235-87373254 | MS.gene97600:CDS | 30.0% | |
GTCAACAAAAAAAACTCATG+CGG | - | chr7.4:87371710-87371729 | None:intergenic | 30.0% | |
TAACTAAGTATGAGTACATG+GGG | + | chr7.4:87373137-87373156 | MS.gene97600:CDS | 30.0% | |
TATAGGCTGTATGTCATAAT+TGG | + | chr7.4:87374278-87374297 | MS.gene97600:intron | 30.0% | |
TCGAACAAGAATTGTAAAAC+TGG | - | chr7.4:87373670-87373689 | None:intergenic | 30.0% | |
TCTCATTGTCATCTATTTGT+GGG | - | chr7.4:87370398-87370417 | None:intergenic | 30.0% | |
TGAAATATACAAAGGATACG+AGG | + | chr7.4:87373234-87373253 | MS.gene97600:CDS | 30.0% | |
TTAAACTTAGCATCTTCATC+TGG | + | chr7.4:87371544-87371563 | MS.gene97600:intron | 30.0% | |
TTATACAAACCACTAAAAGG+AGG | + | chr7.4:87372242-87372261 | MS.gene97600:intron | 30.0% | |
TTCCATTAACTCTCTTGAAT+AGG | - | chr7.4:87373117-87373136 | None:intergenic | 30.0% | |
TTTGTATAGGTAAGTCTTAC+TGG | + | chr7.4:87371035-87371054 | MS.gene97600:intron | 30.0% | |
! | ATTTCAAGAAATAGAGTACC+TGG | - | chr7.4:87373388-87373407 | None:intergenic | 30.0% |
! | CCGTGATAGAAAGTTAATTT+TGG | - | chr7.4:87372954-87372973 | None:intergenic | 30.0% |
! | CTCAACTTGTTTGAAATCAT+TGG | + | chr7.4:87370483-87370502 | MS.gene97600:CDS | 30.0% |
! | CTTTTCATTACCAAATTCAG+AGG | - | chr7.4:87372117-87372136 | None:intergenic | 30.0% |
! | GACATATAATTTGGAACAGA+GGG | - | chr7.4:87374172-87374191 | None:intergenic | 30.0% |
! | GGATATTATAGACCATGTTT+TGG | - | chr7.4:87372450-87372469 | None:intergenic | 30.0% |
! | TGACATATAATTTGGAACAG+AGG | - | chr7.4:87374173-87374192 | None:intergenic | 30.0% |
! | TTGTTTGAAATCATTGGTGA+TGG | + | chr7.4:87370489-87370508 | MS.gene97600:CDS | 30.0% |
! | TTGTTTGTTAGAATCTACGA+TGG | + | chr7.4:87371589-87371608 | MS.gene97600:intron | 30.0% |
! | TTTTGTGTGTATGTATGTGT+GGG | - | chr7.4:87370992-87371011 | None:intergenic | 30.0% |
! | TTTTTGTATCTTCTGAACAG+TGG | + | chr7.4:87372355-87372374 | MS.gene97600:intron | 30.0% |
! | TTTTTGTGTGTATGTATGTG+TGG | - | chr7.4:87370993-87371012 | None:intergenic | 30.0% |
!! | GAATTTTAAGAGTGCAAGTA+TGG | - | chr7.4:87372327-87372346 | None:intergenic | 30.0% |
!! | TAGCAAAAGTATTTACCAGA+AGG | - | chr7.4:87370678-87370697 | None:intergenic | 30.0% |
!! | TATGGTTTGATTTTTCTTGG+AGG | - | chr7.4:87372709-87372728 | None:intergenic | 30.0% |
!! | TTTGAAAGTATTCTTCCACT+AGG | + | chr7.4:87374114-87374133 | MS.gene97600:CDS | 30.0% |
!!! | ATGTATTTTAAAACGGATGG+AGG | - | chr7.4:87371176-87371195 | None:intergenic | 30.0% |
!!! | GACATGTATTTTAAAACGGA+TGG | - | chr7.4:87371179-87371198 | None:intergenic | 30.0% |
AAATATTATTGATGCCGACG+AGG | - | chr7.4:87372471-87372490 | None:intergenic | 35.0% | |
AAATGGAAAGGTCATTCTTG+TGG | + | chr7.4:87374354-87374373 | MS.gene97600:CDS | 35.0% | |
AACATGGTTCACTTTGTCAT+TGG | - | chr7.4:87370361-87370380 | None:intergenic | 35.0% | |
AAGGGAGCCCTAAAATATTT+GGG | - | chr7.4:87373718-87373737 | None:intergenic | 35.0% | |
AAGTACATAATGTGTGTGAG+TGG | + | chr7.4:87373589-87373608 | MS.gene97600:intron | 35.0% | |
AATTAAGCAAGGTAAGGCTA+AGG | - | chr7.4:87370789-87370808 | None:intergenic | 35.0% | |
ACACCATATCTCTTAACACA+AGG | + | chr7.4:87372424-87372443 | MS.gene97600:intron | 35.0% | |
ACCATTGACACTTCATAAAG+AGG | + | chr7.4:87372579-87372598 | MS.gene97600:intron | 35.0% | |
AGAATCAGATGCTTCTAATG+TGG | - | chr7.4:87372024-87372043 | None:intergenic | 35.0% | |
AGCCTATAGAACAAGGAAAT+AGG | - | chr7.4:87374266-87374285 | None:intergenic | 35.0% | |
ATCAAATACCACACCTAAAG+AGG | + | chr7.4:87372535-87372554 | MS.gene97600:intron | 35.0% | |
ATCATGTTCATTAATGCTGG+TGG | + | chr7.4:87374442-87374461 | MS.gene97600:CDS | 35.0% | |
ATGGTCTATAATATCCTCGT+CGG | + | chr7.4:87372454-87372473 | MS.gene97600:intron | 35.0% | |
GACCTATTCAAGAGAGTTAA+TGG | + | chr7.4:87373112-87373131 | MS.gene97600:CDS | 35.0% | |
GATACCAACCTTAAGCATTA+TGG | - | chr7.4:87374145-87374164 | None:intergenic | 35.0% | |
GATGAATAATCATGGACAAG+AGG | - | chr7.4:87372857-87372876 | None:intergenic | 35.0% | |
GATTCATTGTGTGTTCTTTG+TGG | - | chr7.4:87372629-87372648 | None:intergenic | 35.0% | |
GCCTATAGAACAAGGAAATA+GGG | - | chr7.4:87374265-87374284 | None:intergenic | 35.0% | |
GTCAATGGTCAAAGCATATA+TGG | - | chr7.4:87372568-87372587 | None:intergenic | 35.0% | |
GTCTCATTGTCATCTATTTG+TGG | - | chr7.4:87370399-87370418 | None:intergenic | 35.0% | |
GTTCACTTTGTCATTGGAAT+AGG | - | chr7.4:87370355-87370374 | None:intergenic | 35.0% | |
TAAATAACGAGCAACTTGGT+TGG | + | chr7.4:87371848-87371867 | MS.gene97600:intron | 35.0% | |
TAGCTAAATAACGAGCAACT+TGG | + | chr7.4:87371844-87371863 | MS.gene97600:intron | 35.0% | |
TCAGATAGAAGGTGATAAGT+GGG | - | chr7.4:87372201-87372220 | None:intergenic | 35.0% | |
TCCCTATTTCCTTGTTCTAT+AGG | + | chr7.4:87374261-87374280 | MS.gene97600:intron | 35.0% | |
TCTTGAATAGGTCAATCTCT+GGG | - | chr7.4:87373105-87373124 | None:intergenic | 35.0% | |
TGGCAATATCTGATGTTCAT+TGG | - | chr7.4:87372271-87372290 | None:intergenic | 35.0% | |
! | AACACTCTGATTTGCCAAAT+CGG | + | chr7.4:87370553-87370572 | MS.gene97600:CDS | 35.0% |
! | AAGAAATAGAGTACCTGGAA+TGG | - | chr7.4:87373383-87373402 | None:intergenic | 35.0% |
! | ACCTCTTTATGAAGTGTCAA+TGG | - | chr7.4:87372583-87372602 | None:intergenic | 35.0% |
! | ACTAAGAGAAGGTCCAATTT+TGG | - | chr7.4:87372291-87372310 | None:intergenic | 35.0% |
! | AGAAATAGAGTACCTGGAAT+GGG | - | chr7.4:87373382-87373401 | None:intergenic | 35.0% |
! | AGAATGACCTTTCCATTTTG+AGG | - | chr7.4:87374352-87374371 | None:intergenic | 35.0% |
! | GTATCAACTTTGGTTGATGT+TGG | + | chr7.4:87373259-87373278 | MS.gene97600:CDS | 35.0% |
! | TACCATTGAAGCTTCTTTTG+TGG | + | chr7.4:87373959-87373978 | MS.gene97600:intron | 35.0% |
! | TGGTAATGAAAAGACTTGTC+AGG | + | chr7.4:87372124-87372143 | MS.gene97600:intron | 35.0% |
!! | ATATGGTTTGCTTCCTCTTT+AGG | - | chr7.4:87372551-87372570 | None:intergenic | 35.0% |
!! | CTCTTCTGTCTATTTCTACT+CGG | + | chr7.4:87370610-87370629 | MS.gene97600:CDS | 35.0% |
!!! | GAAATTTTGGCTCAACAATC+TGG | + | chr7.4:87374490-87374509 | MS.gene97600:CDS | 35.0% |
AACTGCAGGGAAAACCAAAT+TGG | - | chr7.4:87370445-87370464 | None:intergenic | 40.0% | |
AAGACTGCTGAAATACAAGG+CGG | + | chr7.4:87371777-87371796 | MS.gene97600:intron | 40.0% | |
ACAAGTCTGGATGCATTTGT+TGG | - | chr7.4:87374406-87374425 | None:intergenic | 40.0% | |
AGGAGATGCCATAATGCTTA+AGG | + | chr7.4:87374134-87374153 | MS.gene97600:CDS | 40.0% | |
ATTGCAGCATTAAGAACTGC+AGG | - | chr7.4:87370459-87370478 | None:intergenic | 40.0% | |
CAGATAGAAGGTGATAAGTG+GGG | - | chr7.4:87372200-87372219 | None:intergenic | 40.0% | |
CATTTGCAATCACTTGAGGA+AGG | - | chr7.4:87373354-87373373 | None:intergenic | 40.0% | |
CTCTTGAATAGGTCAATCTC+TGG | - | chr7.4:87373106-87373125 | None:intergenic | 40.0% | |
CTTAACACAAGGCCAAAACA+TGG | + | chr7.4:87372435-87372454 | MS.gene97600:intron | 40.0% | |
GAAGGGAGCCCTAAAATATT+TGG | - | chr7.4:87373719-87373738 | None:intergenic | 40.0% | |
GACATACAGCCTATAGAACA+AGG | - | chr7.4:87374273-87374292 | None:intergenic | 40.0% | |
GACCACAAAAGAAGCTTCAA+TGG | - | chr7.4:87373964-87373983 | None:intergenic | 40.0% | |
GATGCATTTGCAATCACTTG+AGG | - | chr7.4:87373358-87373377 | None:intergenic | 40.0% | |
GATGCCATAATGCTTAAGGT+TGG | + | chr7.4:87374138-87374157 | MS.gene97600:intron | 40.0% | |
GGCTGTATGTCATAATTGGT+CGG | + | chr7.4:87374282-87374301 | MS.gene97600:intron | 40.0% | |
GTCAGATAGAAGGTGATAAG+TGG | - | chr7.4:87372202-87372221 | None:intergenic | 40.0% | |
GTTGTTGTGAGAGATAACGA+AGG | - | chr7.4:87372170-87372189 | None:intergenic | 40.0% | |
TCCTCCAACCACTTATGAAA+AGG | + | chr7.4:87372491-87372510 | MS.gene97600:intron | 40.0% | |
TGACAAAGTGAACCATGTTG+TGG | + | chr7.4:87370362-87370381 | MS.gene97600:CDS | 40.0% | |
TGTTGTGCTTTCTCCGTTAT+TGG | + | chr7.4:87374535-87374554 | MS.gene97600:CDS | 40.0% | |
TTAGGGATGATTGAGCATGT+TGG | + | chr7.4:87374081-87374100 | MS.gene97600:intron | 40.0% | |
TTGATGGAGACACTAAGAGA+AGG | - | chr7.4:87372302-87372321 | None:intergenic | 40.0% | |
TTGCAGCATTAAGAACTGCA+GGG | - | chr7.4:87370458-87370477 | None:intergenic | 40.0% | |
TTGCTAGCAAGCGTAACATA+CGG | - | chr7.4:87370584-87370603 | None:intergenic | 40.0% | |
TTTCTCCGTTATTGGAGTGA+TGG | + | chr7.4:87374543-87374562 | MS.gene97600:CDS | 40.0% | |
! | AAGGTGATAAGTGGGGTATT+GGG | - | chr7.4:87372193-87372212 | None:intergenic | 40.0% |
! | ACCTTTTCATAAGTGGTTGG+AGG | - | chr7.4:87372495-87372514 | None:intergenic | 40.0% |
! | CGTACCTTTTCATAAGTGGT+TGG | - | chr7.4:87372498-87372517 | None:intergenic | 40.0% |
! | GGTACGTACCTTTTCATAAG+TGG | - | chr7.4:87372502-87372521 | None:intergenic | 40.0% |
! | GTTTTTGCAATCACACCTTC+TGG | + | chr7.4:87370660-87370679 | MS.gene97600:CDS | 40.0% |
! | TCAACTTTGGTTGATGTTGG+AGG | + | chr7.4:87373262-87373281 | MS.gene97600:CDS | 40.0% |
! | TTGCAGAAGCTTTAGCTATG+CGG | - | chr7.4:87372094-87372113 | None:intergenic | 40.0% |
!! | ATACGAGGGAGTATCAACTT+TGG | + | chr7.4:87373249-87373268 | MS.gene97600:CDS | 40.0% |
!! | GATAACGAAGGTGTTGTCAT+TGG | - | chr7.4:87372158-87372177 | None:intergenic | 40.0% |
!! | TGGCCTTGTGTTAAGAGATA+TGG | - | chr7.4:87372430-87372449 | None:intergenic | 40.0% |
AACATACGGTCAAGCCGATT+TGG | - | chr7.4:87370570-87370589 | None:intergenic | 45.0% | |
ACCACAACCCTATCAAAGCA+GGG | - | chr7.4:87370755-87370774 | None:intergenic | 45.0% | |
AGCATTATGGCATCTCCTAG+TGG | - | chr7.4:87374132-87374151 | None:intergenic | 45.0% | |
ATGTGTCACCCTGCTTTGAT+AGG | + | chr7.4:87370744-87370763 | MS.gene97600:CDS | 45.0% | |
CAAATTGGCACCTAGTACCA+TGG | - | chr7.4:87370430-87370449 | None:intergenic | 45.0% | |
CACAATGCTGCCATCATCAT+TGG | - | chr7.4:87370637-87370656 | None:intergenic | 45.0% | |
CATGGTACTAGGTGCCAATT+TGG | + | chr7.4:87370428-87370447 | MS.gene97600:CDS | 45.0% | |
GAAGGTGATAAGTGGGGTAT+TGG | - | chr7.4:87372194-87372213 | None:intergenic | 45.0% | |
GATGCAGCATGTCAGATAGA+AGG | - | chr7.4:87372212-87372231 | None:intergenic | 45.0% | |
GCCAAGACTGCTGAAATACA+AGG | + | chr7.4:87371774-87371793 | MS.gene97600:intron | 45.0% | |
GCCTTGTATTTCAGCAGTCT+TGG | - | chr7.4:87371778-87371797 | None:intergenic | 45.0% | |
GCTTCTGCAACCTCTGAATT+TGG | + | chr7.4:87372104-87372123 | MS.gene97600:intron | 45.0% | |
GGATGTGAGTTTCCACAACA+TGG | - | chr7.4:87370377-87370396 | None:intergenic | 45.0% | |
GTTGATGTTGGAGGTGGAAA+TGG | + | chr7.4:87373271-87373290 | MS.gene97600:CDS | 45.0% | |
GTTTGCTTCCTCTTTAGGTG+TGG | - | chr7.4:87372546-87372565 | None:intergenic | 45.0% | |
TACCACAACCCTATCAAAGC+AGG | - | chr7.4:87370756-87370775 | None:intergenic | 45.0% | |
TCTACTCGGACCAATGATGA+TGG | + | chr7.4:87370624-87370643 | MS.gene97600:CDS | 45.0% | |
TGTGTCACCCTGCTTTGATA+GGG | + | chr7.4:87370745-87370764 | MS.gene97600:CDS | 45.0% | |
! | ACTTTGGTTGATGTTGGAGG+TGG | + | chr7.4:87373265-87373284 | MS.gene97600:CDS | 45.0% |
! | CATTGGACACCTCCTTTTAG+TGG | - | chr7.4:87372254-87372273 | None:intergenic | 45.0% |
! | GAGTGCAAGTATGGTGTTGA+TGG | - | chr7.4:87372318-87372337 | None:intergenic | 45.0% |
! | GTGCATTGACATGTGTGAAG+TGG | + | chr7.4:87371376-87371395 | MS.gene97600:intron | 45.0% |
! | TGCAGAAGCTTTAGCTATGC+GGG | - | chr7.4:87372093-87372112 | None:intergenic | 45.0% |
!! | AGGTGATAAGTGGGGTATTG+GGG | - | chr7.4:87372192-87372211 | None:intergenic | 45.0% |
!! | CTGGATGCATTTGTTGGTTC+TGG | - | chr7.4:87374400-87374419 | None:intergenic | 45.0% |
!! | GGCAAATCAGAGTGTTGAGT+TGG | - | chr7.4:87370549-87370568 | None:intergenic | 45.0% |
ACACTCTCTGCCATGGTACT+AGG | + | chr7.4:87370417-87370436 | MS.gene97600:CDS | 50.0% | |
ACCCTGCTTTGATAGGGTTG+TGG | + | chr7.4:87370751-87370770 | MS.gene97600:CDS | 50.0% | |
CAATGAGACACTCTCTGCCA+TGG | + | chr7.4:87370410-87370429 | MS.gene97600:CDS | 50.0% | |
GCAAATGCATCACCCATTCC+AGG | + | chr7.4:87373367-87373386 | MS.gene97600:CDS | 50.0% | |
GGGATGATTGAGCATGTTGG+AGG | + | chr7.4:87374084-87374103 | MS.gene97600:intron | 50.0% | |
! | AGAAGCTTTAGCTATGCGGG+AGG | - | chr7.4:87372090-87372109 | None:intergenic | 50.0% |
! | GAAGCTTTAGCTATGCGGGA+GGG | - | chr7.4:87372089-87372108 | None:intergenic | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 87370345 | 87374579 | 87370345 | ID=MS.gene97600 |
chr7.4 | mRNA | 87370345 | 87374579 | 87370345 | ID=MS.gene97600.t1;Parent=MS.gene97600 |
chr7.4 | exon | 87370345 | 87370772 | 87370345 | ID=MS.gene97600.t1.exon1;Parent=MS.gene97600.t1 |
chr7.4 | CDS | 87370345 | 87370772 | 87370345 | ID=cds.MS.gene97600.t1;Parent=MS.gene97600.t1 |
chr7.4 | exon | 87373075 | 87373388 | 87373075 | ID=MS.gene97600.t1.exon2;Parent=MS.gene97600.t1 |
chr7.4 | CDS | 87373075 | 87373388 | 87373075 | ID=cds.MS.gene97600.t1;Parent=MS.gene97600.t1 |
chr7.4 | exon | 87374085 | 87374155 | 87374085 | ID=MS.gene97600.t1.exon3;Parent=MS.gene97600.t1 |
chr7.4 | CDS | 87374085 | 87374155 | 87374085 | ID=cds.MS.gene97600.t1;Parent=MS.gene97600.t1 |
chr7.4 | exon | 87374283 | 87374579 | 87374283 | ID=MS.gene97600.t1.exon4;Parent=MS.gene97600.t1 |
chr7.4 | CDS | 87374283 | 87374579 | 87374283 | ID=cds.MS.gene97600.t1;Parent=MS.gene97600.t1 |
Gene Sequence |
Protein sequence |