Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99140.t1 | XP_013443839.1 | 73.9 | 750 | 76 | 8 | 4 | 689 | 1 | 694 | 1.10E-283 | 985.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99140.t1 | G5CEW6 | 63.2 | 299 | 86 | 3 | 21 | 296 | 862 | 1159 | 3.7e-91 | 337.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99140.t1 | A0A072TK32 | 73.9 | 750 | 76 | 8 | 4 | 689 | 1 | 694 | 7.8e-284 | 985.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene99140 | 0.824995 | 5.97E-54 | -1.69E-46 |
| MS.gene049254 | MS.gene99140 | 0.810971 | 8.84E-51 | -1.69E-46 |
| MS.gene049350 | MS.gene99140 | 0.82116 | 4.68E-53 | -1.69E-46 |
| MS.gene049404 | MS.gene99140 | 0.809018 | 2.33E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene99140 | 0.822726 | 2.03E-53 | -1.69E-46 |
| MS.gene049850 | MS.gene99140 | 0.805819 | 1.11E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene99140 | 0.804767 | 1.84E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene99140 | 0.809163 | 2.17E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene99140 | 0.859852 | 3.10E-63 | -1.69E-46 |
| MS.gene051719 | MS.gene99140 | 0.830903 | 2.26E-55 | -1.69E-46 |
| MS.gene051720 | MS.gene99140 | 0.82447 | 7.93E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene99140 | 0.827373 | 1.62E-54 | -1.69E-46 |
| MS.gene051800 | MS.gene99140 | 0.805961 | 1.04E-49 | -1.69E-46 |
| MS.gene052037 | MS.gene99140 | 0.817039 | 4.05E-52 | -1.69E-46 |
| MS.gene052463 | MS.gene99140 | 0.83094 | 2.21E-55 | -1.69E-46 |
| MS.gene052516 | MS.gene99140 | 0.824743 | 6.84E-54 | -1.69E-46 |
| MS.gene052519 | MS.gene99140 | 0.81292 | 3.33E-51 | -1.69E-46 |
| MS.gene052582 | MS.gene99140 | 0.803242 | 3.83E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene99140 | 0.8076 | 4.67E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene99140 | 0.804706 | 1.90E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene99140 | 0.808463 | 3.06E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene99140 | 0.830295 | 3.18E-55 | -1.69E-46 |
| MS.gene053621 | MS.gene99140 | 0.812383 | 4.36E-51 | -1.69E-46 |
| MS.gene05364 | MS.gene99140 | 0.820612 | 6.26E-53 | -1.69E-46 |
| MS.gene05458 | MS.gene99140 | 0.848173 | 7.25E-60 | -1.69E-46 |
| MS.gene054651 | MS.gene99140 | 0.844675 | 6.53E-59 | -1.69E-46 |
| MS.gene054775 | MS.gene99140 | 0.82303 | 1.72E-53 | -1.69E-46 |
| MS.gene054991 | MS.gene99140 | 0.806308 | 8.76E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene99140 | 0.831057 | 2.07E-55 | -1.69E-46 |
| MS.gene055466 | MS.gene99140 | 0.834368 | 3.12E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene99140 | 0.810619 | 1.05E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene99140 | 0.80597 | 1.03E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene99140 | 0.81457 | 1.44E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene99140 | 0.821646 | 3.62E-53 | -1.69E-46 |
| MS.gene056174 | MS.gene99140 | 0.803001 | 4.29E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene99140 | 0.807112 | 5.93E-50 | -1.69E-46 |
| MS.gene056366 | MS.gene99140 | 0.820111 | 8.15E-53 | -1.69E-46 |
| MS.gene056507 | MS.gene99140 | 0.83038 | 3.03E-55 | -1.69E-46 |
| MS.gene056595 | MS.gene99140 | 0.820205 | 7.76E-53 | -1.69E-46 |
| MS.gene05686 | MS.gene99140 | 0.848786 | 4.91E-60 | -1.69E-46 |
| MS.gene057132 | MS.gene99140 | 0.803659 | 3.14E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene99140 | 0.822211 | 2.67E-53 | -1.69E-46 |
| MS.gene057294 | MS.gene99140 | 0.815552 | 8.72E-52 | -1.69E-46 |
| MS.gene057444 | MS.gene99140 | 0.814656 | 1.38E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene99140 | 0.804258 | 2.36E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene99140 | 0.820857 | 5.50E-53 | -1.69E-46 |
| MS.gene058339 | MS.gene99140 | 0.807486 | 4.94E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene99140 | 0.843917 | 1.04E-58 | -1.69E-46 |
| MS.gene058979 | MS.gene99140 | 0.810949 | 8.94E-51 | -1.69E-46 |
| MS.gene059015 | MS.gene99140 | 0.807794 | 4.25E-50 | -1.69E-46 |
| MS.gene059439 | MS.gene99140 | 0.801335 | 9.45E-49 | -1.69E-46 |
| MS.gene059570 | MS.gene99140 | 0.825555 | 4.40E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99140.t1 | MTR_8g007000 | 74.000 | 750 | 75 | 8 | 4 | 689 | 1 | 694 | 0.0 | 1057 |
| MS.gene99140.t1 | MTR_8g008680 | 61.742 | 528 | 61 | 12 | 4 | 394 | 986 | 1509 | 0.0 | 584 |
| MS.gene99140.t1 | MTR_8g008680 | 74.815 | 270 | 23 | 2 | 394 | 618 | 1001 | 1270 | 6.30e-127 | 410 |
| MS.gene99140.t1 | MTR_8g008680 | 61.742 | 528 | 61 | 12 | 4 | 394 | 995 | 1518 | 0.0 | 582 |
| MS.gene99140.t1 | MTR_8g008680 | 74.815 | 270 | 23 | 2 | 394 | 618 | 1010 | 1279 | 1.06e-125 | 409 |
| MS.gene99140.t1 | MTR_8g008680 | 61.742 | 528 | 61 | 12 | 4 | 394 | 986 | 1509 | 0.0 | 582 |
| MS.gene99140.t1 | MTR_8g008680 | 74.815 | 270 | 23 | 2 | 394 | 618 | 1001 | 1270 | 9.40e-126 | 409 |
| MS.gene99140.t1 | MTR_8g008680 | 61.742 | 528 | 61 | 12 | 4 | 394 | 984 | 1507 | 0.0 | 582 |
| MS.gene99140.t1 | MTR_8g008680 | 74.815 | 270 | 23 | 2 | 394 | 618 | 999 | 1268 | 1.05e-125 | 409 |
| MS.gene99140.t1 | MTR_8g008680 | 61.742 | 528 | 61 | 12 | 4 | 394 | 940 | 1463 | 0.0 | 581 |
| MS.gene99140.t1 | MTR_8g008680 | 74.815 | 270 | 23 | 2 | 394 | 618 | 955 | 1224 | 9.90e-126 | 409 |
| MS.gene99140.t1 | MTR_7g451340 | 58.193 | 476 | 96 | 10 | 20 | 394 | 1132 | 1605 | 7.62e-163 | 509 |
| MS.gene99140.t1 | MTR_7g451340 | 64.384 | 292 | 52 | 5 | 371 | 618 | 1101 | 1384 | 2.13e-112 | 372 |
| MS.gene99140.t1 | MTR_7g451340 | 58.193 | 476 | 96 | 10 | 20 | 394 | 1132 | 1605 | 1.92e-161 | 508 |
| MS.gene99140.t1 | MTR_7g451340 | 64.384 | 292 | 52 | 5 | 371 | 618 | 1101 | 1384 | 1.03e-111 | 370 |
| MS.gene99140.t1 | MTR_4g130570 | 43.548 | 248 | 128 | 4 | 34 | 274 | 204 | 446 | 7.71e-54 | 198 |
| MS.gene99140.t1 | MTR_4g130570 | 35.391 | 243 | 109 | 6 | 421 | 616 | 194 | 435 | 3.21e-35 | 143 |
| MS.gene99140.t1 | MTR_8g006995 | 75.325 | 77 | 10 | 1 | 622 | 689 | 188 | 264 | 2.51e-29 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene99140.t1 | AT3G60240 | 58.529 | 340 | 123 | 6 | 21 | 351 | 1075 | 1405 | 2.36e-105 | 352 |
| MS.gene99140.t1 | AT3G60240 | 49.143 | 350 | 115 | 7 | 318 | 618 | 992 | 1327 | 5.26e-84 | 290 |
| MS.gene99140.t1 | AT3G60240 | 58.529 | 340 | 123 | 6 | 21 | 351 | 1071 | 1401 | 2.37e-105 | 352 |
| MS.gene99140.t1 | AT3G60240 | 49.143 | 350 | 115 | 7 | 318 | 618 | 988 | 1323 | 5.55e-84 | 290 |
| MS.gene99140.t1 | AT3G60240 | 58.529 | 340 | 123 | 6 | 21 | 351 | 1073 | 1403 | 2.48e-105 | 352 |
| MS.gene99140.t1 | AT3G60240 | 49.143 | 350 | 115 | 7 | 318 | 618 | 990 | 1325 | 5.61e-84 | 290 |
| MS.gene99140.t1 | AT5G57870 | 34.332 | 367 | 210 | 10 | 34 | 389 | 217 | 563 | 1.65e-49 | 186 |
| MS.gene99140.t1 | AT5G57870 | 34.199 | 231 | 106 | 5 | 432 | 616 | 217 | 447 | 1.81e-32 | 134 |
| MS.gene99140.t1 | AT5G57870 | 34.332 | 367 | 210 | 10 | 34 | 389 | 213 | 559 | 1.81e-49 | 186 |
| MS.gene99140.t1 | AT5G57870 | 34.199 | 231 | 106 | 5 | 432 | 616 | 213 | 443 | 2.10e-32 | 134 |
| MS.gene99140.t1 | AT2G24050 | 38.868 | 265 | 145 | 6 | 34 | 290 | 176 | 431 | 1.19e-48 | 183 |
| MS.gene99140.t1 | AT2G24050 | 31.329 | 316 | 143 | 12 | 349 | 616 | 117 | 406 | 3.04e-31 | 130 |
| MS.gene99140.t1 | AT1G62410 | 35.000 | 200 | 119 | 4 | 59 | 253 | 3 | 196 | 1.60e-27 | 111 |
| MS.gene99140.t1 | AT1G62410 | 28.902 | 173 | 90 | 5 | 457 | 597 | 3 | 174 | 4.99e-14 | 72.4 |
| MS.gene99140.t1 | AT1G07320 | 48.750 | 80 | 32 | 1 | 616 | 686 | 183 | 262 | 2.17e-18 | 86.7 |
| MS.gene99140.t1 | AT1G07320 | 48.750 | 80 | 32 | 1 | 616 | 686 | 183 | 262 | 2.24e-18 | 86.3 |
| MS.gene99140.t1 | AT1G07320 | 48.750 | 80 | 32 | 1 | 616 | 686 | 183 | 262 | 2.24e-18 | 86.3 |
| MS.gene99140.t1 | AT1G07320 | 48.750 | 80 | 32 | 1 | 616 | 686 | 183 | 262 | 2.24e-18 | 86.7 |
Find 158 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCATAAGTTTCTTAGCTT+TGG | 0.229663 | 8.2:+82759535 | None:intergenic |
| ATCCATAAGTTTCTTAGCTT+TGG | 0.229663 | 8.2:+82761832 | None:intergenic |
| TGTACCTCCTCAATCTTCTT+TGG | 0.252668 | 8.2:+82761683 | None:intergenic |
| CAAGCTGGTAGCATGGATTT+TGG | 0.257533 | 8.2:-82761626 | MS.gene99140:CDS |
| TTTGGTCCTAGCGGTATTAA+TGG | 0.269585 | 8.2:-82761608 | MS.gene99140:CDS |
| TGCATGCTAATGAGTATTAT+TGG | 0.279477 | 8.2:-82761872 | MS.gene99140:CDS |
| TGCAAGCTAATGAGTTCTAT+TGG | 0.311646 | 8.2:-82759575 | MS.gene99140:CDS |
| TCCATAAGTTTCTTAGCTTT+GGG | 0.313875 | 8.2:+82759536 | None:intergenic |
| TCCATAAGTTTCTTAGCTTT+GGG | 0.313875 | 8.2:+82761833 | None:intergenic |
| TTTCAATAGGCTTCTTGAAC+AGG | 0.337764 | 8.2:-82760044 | MS.gene99140:CDS |
| TTTGAATAATATGCTAGAAA+TGG | 0.339585 | 8.2:-82762491 | None:intergenic |
| GTTGAGAAGAAGTACAAAAT+AGG | 0.354859 | 8.2:-82760139 | MS.gene99140:CDS |
| TAACATGCGCCTTCTTGCCT+TGG | 0.361754 | 8.2:+82762021 | None:intergenic |
| TCCCAAAGCTAAGAAACTTA+TGG | 0.364650 | 8.2:-82759537 | MS.gene99140:CDS |
| TCCCAAAGCTAAGAAACTTA+TGG | 0.364650 | 8.2:-82761834 | MS.gene99140:CDS |
| TTCTTCAGATGAACGACTTC+AGG | 0.365705 | 8.2:-82761357 | MS.gene99140:CDS |
| CAACTCTATACCCCTCTTCC+CGG | 0.373387 | 8.2:+82762453 | None:intergenic |
| TCGCTGTCCACACTCAAATC+AGG | 0.375126 | 8.2:+82759890 | None:intergenic |
| CCAGCTCATAATATAAACTA+TGG | 0.375408 | 8.2:-82761476 | MS.gene99140:CDS |
| ACAACAAGAAGAGGCAAATA+AGG | 0.378499 | 8.2:-82759804 | MS.gene99140:CDS |
| TTAGGAAACATCAGATTGAT+TGG | 0.380663 | 8.2:-82762001 | MS.gene99140:CDS |
| TAACTCCTCAGAATTTCAAT+AGG | 0.384689 | 8.2:-82760057 | MS.gene99140:CDS |
| AGAACAAGAAGAGGAAAATA+AGG | 0.385590 | 8.2:-82762101 | MS.gene99140:CDS |
| TCGTTGTCCACACTCAAATC+AGG | 0.387004 | 8.2:+82762187 | None:intergenic |
| TGCCAACTTCTGCTCACATC+TGG | 0.388294 | 8.2:-82759924 | MS.gene99140:CDS |
| TGCCAACTTCTGCTCACATC+TGG | 0.388294 | 8.2:-82762221 | MS.gene99140:CDS |
| GGTGACAAAGGGGTTTATTA+CGG | 0.392372 | 8.2:-82759384 | MS.gene99140:CDS |
| GCAAGCTAATGAGTTCTATT+GGG | 0.393172 | 8.2:-82759574 | MS.gene99140:CDS |
| GTGTCGTCTCACAAATCTTC+GGG | 0.397295 | 8.2:-82759982 | MS.gene99140:CDS |
| TTGATTTGAGAAGGAATAGA+TGG | 0.397789 | 8.2:-82759433 | MS.gene99140:CDS |
| TTGATTTGAGAAGGAATAGA+TGG | 0.397789 | 8.2:-82761730 | MS.gene99140:CDS |
| TAGGGTGAGGTTTATGTTGA+AGG | 0.403405 | 8.2:-82759462 | MS.gene99140:CDS |
| TAGGGTGAGGTTTATGTTGA+AGG | 0.403405 | 8.2:-82761759 | MS.gene99140:CDS |
| AAGGCAAGAAGGCGCATGTT+AGG | 0.418141 | 8.2:-82762019 | MS.gene99140:CDS |
| GAAGGAATAGATGGCAAGTA+AGG | 0.420946 | 8.2:-82759424 | MS.gene99140:CDS |
| GAAGGAATAGATGGCAAGTA+AGG | 0.420946 | 8.2:-82761721 | MS.gene99140:CDS |
| GCCTCAACATCTTCCTCATC+AGG | 0.425779 | 8.2:+82759602 | None:intergenic |
| GCCTCAACATCTTCCTCATC+AGG | 0.425779 | 8.2:+82761899 | None:intergenic |
| ATTATTTGAATGGTAGGTAT+GGG | 0.425924 | 8.2:-82759208 | MS.gene99140:CDS |
| CCTAGCGGTATTAATGGTTA+TGG | 0.428094 | 8.2:-82761602 | MS.gene99140:CDS |
| CACCCCTCTCAAATTCCTCT+TGG | 0.431528 | 8.2:+82759831 | None:intergenic |
| TTATCTGAGCGCACACTGTA+TGG | 0.433960 | 8.2:-82761575 | MS.gene99140:CDS |
| TCATATCCAGCTGGACTTGA+AGG | 0.434008 | 8.2:+82761512 | None:intergenic |
| AAGGAATCAAACCCCTCTGC+TGG | 0.437000 | 8.2:+82760194 | None:intergenic |
| ATCAGGATTGGAATCTCAAC+AGG | 0.439304 | 8.2:-82761436 | MS.gene99140:CDS |
| GCATGCTAATGAGTATTATT+GGG | 0.440709 | 8.2:-82761871 | MS.gene99140:CDS |
| CAACAGAGACTTGAGGAATC+AGG | 0.446316 | 8.2:-82761453 | MS.gene99140:CDS |
| AGATGTTATGCAAGAGAGGC+AGG | 0.447211 | 8.2:-82761657 | MS.gene99140:CDS |
| GCATACATTTCGCAGTAGAT+AGG | 0.447234 | 8.2:+82759944 | None:intergenic |
| GATTATTTGAATGGTAGGTA+TGG | 0.454575 | 8.2:-82759209 | MS.gene99140:CDS |
| CTTCCTTCTTCTCAGCCTTG+TGG | 0.456631 | 8.2:+82762416 | None:intergenic |
| AAGGAGGAAAGTTGATGAAA+AGG | 0.461900 | 8.2:-82759405 | MS.gene99140:CDS |
| GCATACACTTCACAGAAGAT+AGG | 0.469793 | 8.2:+82762241 | None:intergenic |
| AATCTTCAAGAAGGCTCTGA+TGG | 0.470548 | 8.2:-82762266 | MS.gene99140:CDS |
| GGTGTCGTCTCACAAATCTT+CGG | 0.474457 | 8.2:-82759983 | MS.gene99140:CDS |
| TTCTACTAGCTTCCAGCAGA+GGG | 0.478714 | 8.2:-82760206 | MS.gene99140:intron |
| AATCTTCGGGAAGGCTCTGA+TGG | 0.487521 | 8.2:-82759969 | MS.gene99140:CDS |
| GGTTGATGAGGCCGAGGATG+AGG | 0.488612 | 8.2:-82759783 | MS.gene99140:intron |
| TTCAAATAATCCGCAGCACC+AGG | 0.488724 | 8.2:+82759221 | None:intergenic |
| CCATAGTTTATATTATGAGC+TGG | 0.492444 | 8.2:+82761476 | None:intergenic |
| CACCCCTCTCAAATTCCTCC+TGG | 0.492995 | 8.2:+82762128 | None:intergenic |
| GAAGTTACCAGGTCAGTGTC+AGG | 0.496934 | 8.2:-82759627 | MS.gene99140:CDS |
| GGTTTATTACGGCGATGAAA+AGG | 0.497086 | 8.2:-82759373 | MS.gene99140:CDS |
| ATGGAAAGAAATAGCCGTGC+CGG | 0.497408 | 8.2:-82762472 | MS.gene99140:CDS |
| GGTTGATGAGGCCGAGGGTG+AGG | 0.499924 | 8.2:-82762080 | MS.gene99140:CDS |
| GATCCACAAGGCTGAGAAGA+AGG | 0.500096 | 8.2:-82762419 | MS.gene99140:CDS |
| GTTGATGAAAAGGTGACAAA+GGG | 0.501509 | 8.2:-82759395 | MS.gene99140:CDS |
| CTGCGGATTATTTGAATGGT+AGG | 0.506583 | 8.2:-82759214 | MS.gene99140:CDS |
| AGGATGTAATTGATTTGAGA+AGG | 0.507541 | 8.2:-82759442 | MS.gene99140:CDS |
| AGGATGTAATTGATTTGAGA+AGG | 0.507541 | 8.2:-82761739 | MS.gene99140:CDS |
| GAAATAGCCGTGCCGGGAAG+AGG | 0.510985 | 8.2:-82762465 | MS.gene99140:CDS |
| GCGTGAGGTGAAGTTGCAAC+AGG | 0.511152 | 8.2:+82761413 | None:intergenic |
| TCACCTCACGCTCAGTCGCA+AGG | 0.512633 | 8.2:-82761401 | MS.gene99140:CDS |
| GACAGACCTTCAAGTCCAGC+TGG | 0.512927 | 8.2:-82761518 | MS.gene99140:CDS |
| GAGACTTGAGGAATCAGGAT+TGG | 0.513667 | 8.2:-82761448 | MS.gene99140:CDS |
| CAAGTAAGGAGGAAAGTTGA+TGG | 0.517622 | 8.2:-82761707 | MS.gene99140:CDS |
| CAAGCTGTCAAATGAAGAAA+GGG | 0.521481 | 8.2:-82762056 | MS.gene99140:CDS |
| TGACAGCTTGACCTCATCCT+CGG | 0.522145 | 8.2:+82759772 | None:intergenic |
| TCAAGCTGTCAAATGAAGAA+AGG | 0.526150 | 8.2:-82762057 | MS.gene99140:CDS |
| AAATAGCCGTGCCGGGAAGA+GGG | 0.528414 | 8.2:-82762464 | MS.gene99140:CDS |
| AGCCAGATGTGAGCAGAAGT+TGG | 0.530655 | 8.2:+82762219 | None:intergenic |
| TGTAAGAGAGACTGAGGAGA+AGG | 0.531986 | 8.2:+82760175 | None:intergenic |
| AAATAAGGTTGATGAGGCCG+AGG | 0.534130 | 8.2:-82762086 | MS.gene99140:CDS |
| GGAATAGATGGCAAGTAAGG+AGG | 0.534393 | 8.2:-82759421 | MS.gene99140:CDS |
| GGAATAGATGGCAAGTAAGG+AGG | 0.534393 | 8.2:-82761718 | MS.gene99140:CDS |
| AGAGAAGAACCAAGGCAAGA+AGG | 0.535181 | 8.2:-82762030 | MS.gene99140:CDS |
| GGTGCTGCGGATTATTTGAA+TGG | 0.536366 | 8.2:-82759218 | MS.gene99140:CDS |
| CTTAAATGATCATATCCAGC+TGG | 0.542297 | 8.2:+82761503 | None:intergenic |
| GTTATTAGTAAACAAATGCC+AGG | 0.544126 | 8.2:-82762146 | MS.gene99140:CDS |
| CAAGGCTGAGAAGAAGGAAG+AGG | 0.548045 | 8.2:-82762413 | MS.gene99140:CDS |
| TGAGTTGCCTGATTTGAGTG+TGG | 0.548592 | 8.2:-82762194 | MS.gene99140:CDS |
| GGCGATGAAAAGGTGGGGAT+CGG | 0.548811 | 8.2:-82759363 | MS.gene99140:CDS |
| TAAGTTTCTTAGCTTTGGGA+TGG | 0.550474 | 8.2:+82759540 | None:intergenic |
| TAAGTTTCTTAGCTTTGGGA+TGG | 0.550474 | 8.2:+82761837 | None:intergenic |
| AGTTGATGAAAAGGTGACAA+AGG | 0.551762 | 8.2:-82759396 | MS.gene99140:CDS |
| TAAAGTGTCAGATGCAGAAG+AGG | 0.552033 | 8.2:-82760116 | MS.gene99140:CDS |
| TGGAAAGAAATAGCCGTGCC+GGG | 0.553316 | 8.2:-82762471 | MS.gene99140:CDS |
| AGCCAGATGTGAGCAGAAGT+TGG | 0.554652 | 8.2:+82759922 | None:intergenic |
| AGGCAGGCTCAAGCACAAGC+TGG | 0.560236 | 8.2:-82761641 | MS.gene99140:CDS |
| CAGCAATCAGAGAATACTAC+AGG | 0.562498 | 8.2:-82761322 | MS.gene99140:intron |
| TTATTACGGCGATGAAAAGG+TGG | 0.566716 | 8.2:-82759370 | MS.gene99140:CDS |
| AGAAGAAAATGTTGACAGAG+AGG | 0.570187 | 8.2:-82761967 | MS.gene99140:CDS |
| TCATACAAATTCAATGTCCT+CGG | 0.570589 | 8.2:+82759275 | None:intergenic |
| AAATAAGGTTGATGAGGCCG+AGG | 0.571290 | 8.2:-82759789 | MS.gene99140:CDS |
| CACCTCACGCTCAGTCGCAA+GGG | 0.579445 | 8.2:-82761400 | MS.gene99140:CDS |
| TCCTGATGAGGAAGATGTTG+AGG | 0.581097 | 8.2:-82759603 | MS.gene99140:CDS |
| CGTCTCACAAATCTTCAAGA+AGG | 0.584529 | 8.2:-82762275 | MS.gene99140:CDS |
| TGACAGCTTGACCTCACCCT+CGG | 0.585166 | 8.2:+82762069 | None:intergenic |
| AGAAGAAAATGTTGTCAGAG+AGG | 0.586637 | 8.2:-82759670 | MS.gene99140:intron |
| ACAGAGATGTTATGCAAGAG+AGG | 0.589004 | 8.2:-82761661 | MS.gene99140:CDS |
| GGGTGAACGAGAACAAGAAG+AGG | 0.589192 | 8.2:-82762110 | MS.gene99140:CDS |
| AGAAGCCTATTGAAATTCTG+AGG | 0.589728 | 8.2:+82760052 | None:intergenic |
| TATTACGGCGATGAAAAGGT+GGG | 0.591768 | 8.2:-82759369 | MS.gene99140:CDS |
| TCCTGATGAGGAAGATGTTG+AGG | 0.592876 | 8.2:-82761900 | MS.gene99140:CDS |
| TCAGGATCCTGACACTGACC+TGG | 0.593547 | 8.2:+82759620 | None:intergenic |
| ATGCCAGGAGGAATTTGAGA+GGG | 0.598754 | 8.2:-82762131 | MS.gene99140:CDS |
| AATAGCCGTGCCGGGAAGAG+GGG | 0.601813 | 8.2:-82762463 | MS.gene99140:CDS |
| TGATGGTCCAAAGAAGATTG+AGG | 0.603527 | 8.2:-82761690 | MS.gene99140:CDS |
| TCAAGCACAAGCTGGTAGCA+TGG | 0.604158 | 8.2:-82761633 | MS.gene99140:CDS |
| TTATTTGAATGGTAGGTATG+GGG | 0.606640 | 8.2:-82759207 | MS.gene99140:CDS |
| ATGCCAAGAGGAATTTGAGA+GGG | 0.610772 | 8.2:-82759834 | MS.gene99140:CDS |
| CAAGCTAATGAGTTCTATTG+GGG | 0.615645 | 8.2:-82759573 | MS.gene99140:CDS |
| CGTCTCACAAATCTTCGGGA+AGG | 0.616298 | 8.2:-82759978 | MS.gene99140:CDS |
| GGGTGAACGACAACAAGAAG+AGG | 0.617011 | 8.2:-82759813 | MS.gene99140:CDS |
| GAGTGTATAAAGAAGTTACT+AGG | 0.621779 | 8.2:-82761935 | MS.gene99140:CDS |
| CACACTGTATGGCTCTAGAG+AGG | 0.624363 | 8.2:-82761564 | MS.gene99140:CDS |
| AAGGGAGCAGAGAAGAACCA+AGG | 0.628760 | 8.2:-82762038 | MS.gene99140:CDS |
| GAGTGTATAAAGAAGTTACC+AGG | 0.629786 | 8.2:-82759638 | MS.gene99140:CDS |
| GTTCTACTAGCTTCCAGCAG+AGG | 0.634387 | 8.2:-82760207 | MS.gene99140:intron |
| AATGCCAAGAGGAATTTGAG+AGG | 0.634462 | 8.2:-82759835 | MS.gene99140:CDS |
| AGAAGGAAGAGGCAAAACAG+AGG | 0.635083 | 8.2:-82762402 | MS.gene99140:CDS |
| TCAGTTGCCTGATTTGAGTG+TGG | 0.638515 | 8.2:-82759897 | MS.gene99140:CDS |
| CCATAACCATTAATACCGCT+AGG | 0.640803 | 8.2:+82761602 | None:intergenic |
| TTGATGAAAAGGTGACAAAG+GGG | 0.641511 | 8.2:-82759394 | MS.gene99140:CDS |
| ATTACGGCGATGAAAAGGTG+GGG | 0.642490 | 8.2:-82759368 | MS.gene99140:CDS |
| AGAGGCAAATAAGGTTGATG+AGG | 0.644395 | 8.2:-82759795 | MS.gene99140:CDS |
| AGAGGAAAATAAGGTTGATG+AGG | 0.644395 | 8.2:-82762092 | MS.gene99140:CDS |
| AGAAGTCTATCGAAATTCTG+AGG | 0.644859 | 8.2:+82762349 | None:intergenic |
| ATTATTAAATAAATGCCAAG+AGG | 0.648989 | 8.2:-82759846 | MS.gene99140:CDS |
| TCAATGTCACGATCCTGATG+AGG | 0.650679 | 8.2:-82761912 | MS.gene99140:CDS |
| AATGCCAGGAGGAATTTGAG+AGG | 0.653051 | 8.2:-82762132 | MS.gene99140:CDS |
| GGCCCTTGCGACTGAGCGTG+AGG | 0.653135 | 8.2:+82761398 | None:intergenic |
| ATCATCTGTAAGAGAGACTG+AGG | 0.654041 | 8.2:+82760169 | None:intergenic |
| ATGCAGAAGAGGCAAAGCAG+AGG | 0.657893 | 8.2:-82760105 | MS.gene99140:CDS |
| CTATACCCCTCTTCCCGGCA+CGG | 0.657996 | 8.2:+82762458 | None:intergenic |
| GTATTATTTGATGATCCACA+AGG | 0.660379 | 8.2:-82762431 | MS.gene99140:CDS |
| TCAGTGTCAGGATCCTGATG+AGG | 0.665443 | 8.2:-82759615 | MS.gene99140:CDS |
| CATGCTAATGAGTATTATTG+GGG | 0.667230 | 8.2:-82761870 | MS.gene99140:CDS |
| TGCCAGGAGGAATTTGAGAG+GGG | 0.673299 | 8.2:-82762130 | MS.gene99140:CDS |
| TGCCAAGAGGAATTTGAGAG+GGG | 0.678036 | 8.2:-82759833 | MS.gene99140:CDS |
| TCTACTAGCTTCCAGCAGAG+GGG | 0.686885 | 8.2:-82760205 | MS.gene99140:intron |
| AATAAGGTTGATGAGGCCGA+GGG | 0.692298 | 8.2:-82762085 | MS.gene99140:CDS |
| GACAACGCAATCACTCTCAG+TGG | 0.707177 | 8.2:-82760004 | MS.gene99140:CDS |
| TCTCTTACAGATGATGCACA+AGG | 0.717352 | 8.2:-82760161 | MS.gene99140:CDS |
| TGGTCCAAAGAAGATTGAGG+AGG | 0.721298 | 8.2:-82761687 | MS.gene99140:CDS |
| ACTATGGCAACAGAGACTTG+AGG | 0.726786 | 8.2:-82761460 | MS.gene99140:CDS |
| ATTAGTAAACAAATGCCAGG+AGG | 0.728711 | 8.2:-82762143 | MS.gene99140:CDS |
| GACAACGCGATCACTCTCAG+TGG | 0.748182 | 8.2:-82762301 | MS.gene99140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GGAATTAATCATATTATTAA+AGG | + | chr8.2:82760753-82760772 | None:intergenic | 15.0% |
| !! | TAATCCTAAATGAAATAAAA+TGG | + | chr8.2:82760482-82760501 | None:intergenic | 15.0% |
| !!! | ACGAAAAGATAAATTTTAAA+AGG | - | chr8.2:82759509-82759528 | MS.gene99140:intron | 15.0% |
| !!! | ATTAGGATTTTATCATTATT+AGG | - | chr8.2:82760498-82760517 | MS.gene99140:intron | 15.0% |
| !!! | ATTTTATTTCATTTAGGATT+AGG | - | chr8.2:82760481-82760500 | MS.gene99140:intron | 15.0% |
| !! | ATTATTAAATAAATGCCAAG+AGG | - | chr8.2:82761831-82761850 | MS.gene99140:CDS | 20.0% |
| !! | GCGAAAAAATAACATTTAAA+AGG | - | chr8.2:82761806-82761825 | MS.gene99140:CDS | 20.0% |
| !! | TAATTACTATCTATTATGCA+CGG | - | chr8.2:82761181-82761200 | MS.gene99140:intron | 20.0% |
| !! | TATGATATTCATAAGTTAAC+AGG | + | chr8.2:82760986-82761005 | None:intergenic | 20.0% |
| !! | TCAAGAAACATCATATTTAT+TGG | - | chr8.2:82761973-82761992 | MS.gene99140:CDS | 20.0% |
| !! | TGAATATCATAGAATAGTAA+TGG | - | chr8.2:82760995-82761014 | MS.gene99140:intron | 20.0% |
| !!! | AAAACAGTAAGCAAATTTTA+AGG | - | chr8.2:82760890-82760909 | MS.gene99140:intron | 20.0% |
| !!! | AATTAGTTGTTGTTTGATTT+AGG | - | chr8.2:82760637-82760656 | MS.gene99140:intron | 20.0% |
| !!! | ACAACATGAATTTATCTTTT+AGG | - | chr8.2:82759899-82759918 | MS.gene99140:CDS | 20.0% |
| !!! | ATTAGTTGTTGTTTGATTTA+GGG | - | chr8.2:82760638-82760657 | MS.gene99140:intron | 20.0% |
| !!! | CAACATGAATTTATCTTTTA+GGG | - | chr8.2:82759900-82759919 | MS.gene99140:CDS | 20.0% |
| !!! | CTAACCATTTTATTTCATTT+AGG | - | chr8.2:82760475-82760494 | MS.gene99140:intron | 20.0% |
| !!! | CTATTTTTGTTTAAACGATA+GGG | + | chr8.2:82760698-82760717 | None:intergenic | 20.0% |
| !!! | TTATGGATGTATATTTTGAA+AGG | - | chr8.2:82759860-82759879 | MS.gene99140:CDS | 20.0% |
| ! | AAAGAATGAAACATCATAAC+TGG | + | chr8.2:82760564-82760583 | None:intergenic | 25.0% |
| ! | ATAATGACTCCATCATTTAA+CGG | - | chr8.2:82761358-82761377 | MS.gene99140:CDS | 25.0% |
| ! | ATTATTTGAATGGTAGGTAT+GGG | - | chr8.2:82762469-82762488 | MS.gene99140:CDS | 25.0% |
| ! | CCTATCGTTTAAACAAAAAT+AGG | - | chr8.2:82760696-82760715 | MS.gene99140:intron | 25.0% |
| ! | TATCATAGAATAGTAATGGT+TGG | - | chr8.2:82760999-82761018 | MS.gene99140:intron | 25.0% |
| !!! | CCTATTTTTGTTTAAACGAT+AGG | + | chr8.2:82760699-82760718 | None:intergenic | 25.0% |
| !!! | TGTTATACTTGCTTGTTTTT+TGG | - | chr8.2:82760595-82760614 | MS.gene99140:intron | 25.0% |
| !!! | TTAGTTGTTGTTTGATTTAG+GGG | - | chr8.2:82760639-82760658 | MS.gene99140:intron | 25.0% |
| AAAACTGTAACCGAAAAGAT+AGG | + | chr8.2:82760397-82760416 | None:intergenic | 30.0% | |
| AAACCATAACCGTTAAATGA+TGG | + | chr8.2:82761370-82761389 | None:intergenic | 30.0% | |
| AGAACAAGAAGAGGAAAATA+AGG | - | chr8.2:82759576-82759595 | MS.gene99140:CDS | 30.0% | |
| ATCCAGAAATTTCAGAAAGT+GGG | + | chr8.2:82761433-82761452 | None:intergenic | 30.0% | |
| ATCCATAAGTTTCTTAGCTT+TGG | + | chr8.2:82759848-82759867 | None:intergenic | 30.0% | |
| ATTCATAAGTTAACAGGCAA+GGG | + | chr8.2:82760980-82760999 | None:intergenic | 30.0% | |
| CATATTATTAAAGGCTACGA+AGG | + | chr8.2:82760744-82760763 | None:intergenic | 30.0% | |
| CATGCTAATGAGTATTATTG+GGG | - | chr8.2:82759807-82759826 | MS.gene99140:CDS | 30.0% | |
| CCAGCTCATAATATAAACTA+TGG | - | chr8.2:82760201-82760220 | MS.gene99140:intron | 30.0% | |
| CCATAGTTTATATTATGAGC+TGG | + | chr8.2:82760204-82760223 | None:intergenic | 30.0% | |
| GAGTGTATAAAGAAGTTACT+AGG | - | chr8.2:82759742-82759761 | MS.gene99140:intron | 30.0% | |
| GATTATTTGAATGGTAGGTA+TGG | - | chr8.2:82762468-82762487 | MS.gene99140:CDS | 30.0% | |
| GCATGCTAATGAGTATTATT+GGG | - | chr8.2:82759806-82759825 | MS.gene99140:CDS | 30.0% | |
| GGGTTACAAAAGGAAATAAA+TGG | + | chr8.2:82760678-82760697 | None:intergenic | 30.0% | |
| GTTATTAGTAAACAAATGCC+AGG | - | chr8.2:82759531-82759550 | MS.gene99140:CDS | 30.0% | |
| TAACTCCTCAGAATTTCAAT+AGG | - | chr8.2:82761620-82761639 | MS.gene99140:CDS | 30.0% | |
| TATTCATAAGTTAACAGGCA+AGG | + | chr8.2:82760981-82761000 | None:intergenic | 30.0% | |
| TCATACAAATTCAATGTCCT+CGG | + | chr8.2:82762405-82762424 | None:intergenic | 30.0% | |
| TGCATGCTAATGAGTATTAT+TGG | - | chr8.2:82759805-82759824 | MS.gene99140:CDS | 30.0% | |
| TTAAACGATAGGGTTACAAA+AGG | + | chr8.2:82760688-82760707 | None:intergenic | 30.0% | |
| TTAGGAAACATCAGATTGAT+TGG | - | chr8.2:82759676-82759695 | MS.gene99140:intron | 30.0% | |
| TTATTTGAATGGTAGGTATG+GGG | - | chr8.2:82762470-82762489 | MS.gene99140:CDS | 30.0% | |
| ! | GTATTATTTGATGATCCACA+AGG | - | chr8.2:82759246-82759265 | MS.gene99140:CDS | 30.0% |
| ! | GTTGAGAAGAAGTACAAAAT+AGG | - | chr8.2:82761538-82761557 | MS.gene99140:CDS | 30.0% |
| ! | TCCATAAGTTTCTTAGCTTT+GGG | + | chr8.2:82759847-82759866 | None:intergenic | 30.0% |
| ! | TCCTACACACATTTTGAATA+GGG | - | chr8.2:82761035-82761054 | MS.gene99140:intron | 30.0% |
| ! | TTGATTTGAGAAGGAATAGA+TGG | - | chr8.2:82759947-82759966 | MS.gene99140:CDS | 30.0% |
| ! | TTTTGTGTTGCCTATCTTTT+CGG | - | chr8.2:82760384-82760403 | MS.gene99140:intron | 30.0% |
| !! | AGGATGTAATTGATTTGAGA+AGG | - | chr8.2:82759938-82759957 | MS.gene99140:CDS | 30.0% |
| !! | TAGTTGTTGTTTGATTTAGG+GGG | - | chr8.2:82760640-82760659 | MS.gene99140:intron | 30.0% |
| !!! | GAAAGTGACCTTTTTTATGA+TGG | - | chr8.2:82762347-82762366 | MS.gene99140:CDS | 30.0% |
| !!! | TGAATTTATCTTTTAGGGTG+AGG | - | chr8.2:82759905-82759924 | MS.gene99140:CDS | 30.0% |
| ACAACAAGAAGAGGCAAATA+AGG | - | chr8.2:82761873-82761892 | MS.gene99140:CDS | 35.0% | |
| ACTCCATCATTTAACGGTTA+TGG | - | chr8.2:82761364-82761383 | MS.gene99140:CDS | 35.0% | |
| AGAAGAAAATGTTGACAGAG+AGG | - | chr8.2:82759710-82759729 | MS.gene99140:intron | 35.0% | |
| AGAAGAAAATGTTGTCAGAG+AGG | - | chr8.2:82762007-82762026 | MS.gene99140:CDS | 35.0% | |
| AGAAGCCTATTGAAATTCTG+AGG | + | chr8.2:82761628-82761647 | None:intergenic | 35.0% | |
| AGAAGTCTATCGAAATTCTG+AGG | + | chr8.2:82759331-82759350 | None:intergenic | 35.0% | |
| ATTAGTAAACAAATGCCAGG+AGG | - | chr8.2:82759534-82759553 | MS.gene99140:CDS | 35.0% | |
| CAAGCTAATGAGTTCTATTG+GGG | - | chr8.2:82762104-82762123 | MS.gene99140:CDS | 35.0% | |
| CAAGCTGTCAAATGAAGAAA+GGG | - | chr8.2:82759621-82759640 | MS.gene99140:CDS | 35.0% | |
| CAGAATAGTCTACATATGCA+TGG | + | chr8.2:82761296-82761315 | None:intergenic | 35.0% | |
| CATCAGATTAACTGATGAGA+CGG | + | chr8.2:82760538-82760557 | None:intergenic | 35.0% | |
| CTTAAATGATCATATCCAGC+TGG | + | chr8.2:82760177-82760196 | None:intergenic | 35.0% | |
| GAGTGTATAAAGAAGTTACC+AGG | - | chr8.2:82762039-82762058 | MS.gene99140:CDS | 35.0% | |
| GATCCAGAAATTTCAGAAAG+TGG | + | chr8.2:82761434-82761453 | None:intergenic | 35.0% | |
| GCAAGCTAATGAGTTCTATT+GGG | - | chr8.2:82762103-82762122 | MS.gene99140:CDS | 35.0% | |
| GTATACTCGTATTAGTTGAG+AGG | - | chr8.2:82761250-82761269 | MS.gene99140:intron | 35.0% | |
| TCAAGCTGTCAAATGAAGAA+AGG | - | chr8.2:82759620-82759639 | MS.gene99140:CDS | 35.0% | |
| TCCAGAAATTTCAGAAAGTG+GGG | + | chr8.2:82761432-82761451 | None:intergenic | 35.0% | |
| TCCCAAAGCTAAGAAACTTA+TGG | - | chr8.2:82759843-82759862 | MS.gene99140:CDS | 35.0% | |
| TGCAAGCTAATGAGTTCTAT+TGG | - | chr8.2:82762102-82762121 | MS.gene99140:CDS | 35.0% | |
| TGTTACATTGTGTAGCTGTT+GGG | - | chr8.2:82761117-82761136 | MS.gene99140:intron | 35.0% | |
| TTGATGAAAAGGTGACAAAG+GGG | - | chr8.2:82762283-82762302 | MS.gene99140:CDS | 35.0% | |
| TTGTTACATTGTGTAGCTGT+TGG | - | chr8.2:82761116-82761135 | MS.gene99140:intron | 35.0% | |
| TTTCAATAGGCTTCTTGAAC+AGG | - | chr8.2:82761633-82761652 | MS.gene99140:CDS | 35.0% | |
| ! | AAAAAGGTCACTTTCTTCGT+CGG | + | chr8.2:82762342-82762361 | None:intergenic | 35.0% |
| ! | GTCCTACACACATTTTGAAT+AGG | - | chr8.2:82761034-82761053 | MS.gene99140:intron | 35.0% |
| ! | GTTGATGAAAAGGTGACAAA+GGG | - | chr8.2:82762282-82762301 | MS.gene99140:CDS | 35.0% |
| !! | AAGGAGGAAAGTTGATGAAA+AGG | - | chr8.2:82762272-82762291 | MS.gene99140:CDS | 35.0% |
| !! | AGAGGAAAATAAGGTTGATG+AGG | - | chr8.2:82759585-82759604 | MS.gene99140:CDS | 35.0% |
| !! | AGTTGATGAAAAGGTGACAA+AGG | - | chr8.2:82762281-82762300 | MS.gene99140:CDS | 35.0% |
| !! | GAAGCATTTTGAGAGACAAT+TGG | + | chr8.2:82760303-82760322 | None:intergenic | 35.0% |
| !! | TAAGTTTCTTAGCTTTGGGA+TGG | + | chr8.2:82759843-82759862 | None:intergenic | 35.0% |
| !!! | AGTGACCTTTTTTATGATGG+AGG | - | chr8.2:82762350-82762369 | MS.gene99140:CDS | 35.0% |
| !!! | GATGAGATTGTTTTTACTCC+TGG | - | chr8.2:82762438-82762457 | MS.gene99140:CDS | 35.0% |
| AACGAGACTTTGTAGTGATC+AGG | - | chr8.2:82760830-82760849 | MS.gene99140:intron | 40.0% | |
| AAGGAAGACAATACAGACCA+GGG | + | chr8.2:82760933-82760952 | None:intergenic | 40.0% | |
| AATAGGGCAACGAGGTATAT+GGG | - | chr8.2:82761051-82761070 | MS.gene99140:intron | 40.0% | |
| AATGCCAAGAGGAATTTGAG+AGG | - | chr8.2:82761842-82761861 | MS.gene99140:CDS | 40.0% | |
| ACAGAGATGTTATGCAAGAG+AGG | - | chr8.2:82760016-82760035 | MS.gene99140:CDS | 40.0% | |
| ACGAGACTTTGTAGTGATCA+GGG | - | chr8.2:82760831-82760850 | MS.gene99140:intron | 40.0% | |
| ATCAGGATTGGAATCTCAAC+AGG | - | chr8.2:82760241-82760260 | MS.gene99140:intron | 40.0% | |
| ATCATCTGTAAGAGAGACTG+AGG | + | chr8.2:82761511-82761530 | None:intergenic | 40.0% | |
| ATGCCAAGAGGAATTTGAGA+GGG | - | chr8.2:82761843-82761862 | MS.gene99140:CDS | 40.0% | |
| ATGTGCTGAACTTTATGTCC+TGG | + | chr8.2:82760808-82760827 | None:intergenic | 40.0% | |
| CAAGTAAGGAGGAAAGTTGA+TGG | - | chr8.2:82759970-82759989 | MS.gene99140:CDS | 40.0% | |
| CAGCAATCAGAGAATACTAC+AGG | - | chr8.2:82760355-82760374 | MS.gene99140:intron | 40.0% | |
| CCATAACCATTAATACCGCT+AGG | + | chr8.2:82760078-82760097 | None:intergenic | 40.0% | |
| CCTAGCGGTATTAATGGTTA+TGG | - | chr8.2:82760075-82760094 | MS.gene99140:CDS | 40.0% | |
| CGTCTCACAAATCTTCAAGA+AGG | - | chr8.2:82759402-82759421 | MS.gene99140:CDS | 40.0% | |
| CGTCTCATCAGTTAATCTGA+TGG | - | chr8.2:82760536-82760555 | MS.gene99140:intron | 40.0% | |
| CTCCACCTCCATCATAAAAA+AGG | + | chr8.2:82762358-82762377 | None:intergenic | 40.0% | |
| GAAGGAATAGATGGCAAGTA+AGG | - | chr8.2:82759956-82759975 | MS.gene99140:CDS | 40.0% | |
| GCATACACTTCACAGAAGAT+AGG | + | chr8.2:82759439-82759458 | None:intergenic | 40.0% | |
| GCATACATTTCGCAGTAGAT+AGG | + | chr8.2:82761736-82761755 | None:intergenic | 40.0% | |
| GCCCTATTCAAAATGTGTGT+AGG | + | chr8.2:82761039-82761058 | None:intergenic | 40.0% | |
| GGTGACAAAGGGGTTTATTA+CGG | - | chr8.2:82762293-82762312 | MS.gene99140:CDS | 40.0% | |
| GGTTTATTACGGCGATGAAA+AGG | - | chr8.2:82762304-82762323 | MS.gene99140:CDS | 40.0% | |
| GTTAACAGGCAAGGGAAATT+CGG | + | chr8.2:82760972-82760991 | None:intergenic | 40.0% | |
| GTTACATTGTGTAGCTGTTG+GGG | - | chr8.2:82761118-82761137 | MS.gene99140:intron | 40.0% | |
| TAGGGTGAGGTTTATGTTGA+AGG | - | chr8.2:82759918-82759937 | MS.gene99140:CDS | 40.0% | |
| TATTACGGCGATGAAAAGGT+GGG | - | chr8.2:82762308-82762327 | MS.gene99140:CDS | 40.0% | |
| TCTCTTACAGATGATGCACA+AGG | - | chr8.2:82761516-82761535 | MS.gene99140:CDS | 40.0% | |
| TGATGGTCCAAAGAAGATTG+AGG | - | chr8.2:82759987-82760006 | MS.gene99140:CDS | 40.0% | |
| TGTACCTCCTCAATCTTCTT+TGG | + | chr8.2:82759997-82760016 | None:intergenic | 40.0% | |
| TTATTACGGCGATGAAAAGG+TGG | - | chr8.2:82762307-82762326 | MS.gene99140:CDS | 40.0% | |
| TTCTTCAGATGAACGACTTC+AGG | - | chr8.2:82760320-82760339 | MS.gene99140:intron | 40.0% | |
| TTTGGTCCTAGCGGTATTAA+TGG | - | chr8.2:82760069-82760088 | MS.gene99140:CDS | 40.0% | |
| ! | AATCTTCAAGAAGGCTCTGA+TGG | - | chr8.2:82759411-82759430 | MS.gene99140:CDS | 40.0% |
| ! | ACATTTTGAATAGGGCAACG+AGG | - | chr8.2:82761043-82761062 | MS.gene99140:intron | 40.0% |
| ! | CTGCGGATTATTTGAATGGT+AGG | - | chr8.2:82762463-82762482 | MS.gene99140:CDS | 40.0% |
| ! | TAAAGTGTCAGATGCAGAAG+AGG | - | chr8.2:82761561-82761580 | MS.gene99140:CDS | 40.0% |
| ! | TTGTCTTCCTTGTTTCTCCT+CGG | - | chr8.2:82760942-82760961 | MS.gene99140:intron | 40.0% |
| !! | ACCCCACTTTCTGAAATTTC+TGG | - | chr8.2:82761428-82761447 | MS.gene99140:CDS | 40.0% |
| !! | AGAGGCAAATAAGGTTGATG+AGG | - | chr8.2:82761882-82761901 | MS.gene99140:CDS | 40.0% |
| !!! | CTTTTTTATGATGGAGGTGG+AGG | - | chr8.2:82762356-82762375 | MS.gene99140:CDS | 40.0% |
| !!! | GACCTTTTTTATGATGGAGG+TGG | - | chr8.2:82762353-82762372 | MS.gene99140:CDS | 40.0% |
| AATGCCAGGAGGAATTTGAG+AGG | - | chr8.2:82759545-82759564 | MS.gene99140:CDS | 45.0% | |
| ACTATGGCAACAGAGACTTG+AGG | - | chr8.2:82760217-82760236 | MS.gene99140:intron | 45.0% | |
| ACTCCAAACGTCTCAATTCC+AGG | - | chr8.2:82760787-82760806 | MS.gene99140:intron | 45.0% | |
| AGAAGGAAGAGGCAAAACAG+AGG | - | chr8.2:82759275-82759294 | MS.gene99140:CDS | 45.0% | |
| AGAGAAGAACCAAGGCAAGA+AGG | - | chr8.2:82759647-82759666 | MS.gene99140:CDS | 45.0% | |
| AGATGTTATGCAAGAGAGGC+AGG | - | chr8.2:82760020-82760039 | MS.gene99140:CDS | 45.0% | |
| AGGAAGACAATACAGACCAG+GGG | + | chr8.2:82760932-82760951 | None:intergenic | 45.0% | |
| AGTTAAATGCAGTTTCCCCC+TGG | - | chr8.2:82760913-82760932 | MS.gene99140:intron | 45.0% | |
| ATGCCAGGAGGAATTTGAGA+GGG | - | chr8.2:82759546-82759565 | MS.gene99140:CDS | 45.0% | |
| ATGGAAAGAAATAGCCGTGC+CGG | - | chr8.2:82759205-82759224 | MS.gene99140:CDS | 45.0% | |
| ATTACGGCGATGAAAAGGTG+GGG | - | chr8.2:82762309-82762328 | MS.gene99140:CDS | 45.0% | |
| CAACAGAGACTTGAGGAATC+AGG | - | chr8.2:82760224-82760243 | MS.gene99140:intron | 45.0% | |
| CAAGGAAGACAATACAGACC+AGG | + | chr8.2:82760934-82760953 | None:intergenic | 45.0% | |
| GAATAGGGCAACGAGGTATA+TGG | - | chr8.2:82761050-82761069 | MS.gene99140:intron | 45.0% | |
| GAGACTTGAGGAATCAGGAT+TGG | - | chr8.2:82760229-82760248 | MS.gene99140:intron | 45.0% | |
| GGAATAGATGGCAAGTAAGG+AGG | - | chr8.2:82759959-82759978 | MS.gene99140:CDS | 45.0% | |
| GTGATCAGGGTCTGTAACAT+TGG | - | chr8.2:82760844-82760863 | MS.gene99140:intron | 45.0% | |
| GTGTCGTCTCACAAATCTTC+GGG | - | chr8.2:82759398-82759417 | MS.gene99140:CDS | 45.0% | |
| TAATGGTTGGAGACTGCGAA+AGG | - | chr8.2:82761012-82761031 | MS.gene99140:intron | 45.0% | |
| TCAATGTCACGATCCTGATG+AGG | - | chr8.2:82759765-82759784 | MS.gene99140:intron | 45.0% | |
| TCATATCCAGCTGGACTTGA+AGG | + | chr8.2:82760168-82760187 | None:intergenic | 45.0% | |
| TCCTGATGAGGAAGATGTTG+AGG | - | chr8.2:82759777-82759796 | MS.gene99140:intron | 45.0% | |
| TCGTTGTCCACACTCAAATC+AGG | + | chr8.2:82759493-82759512 | None:intergenic | 45.0% | |
| TGCCAAGAGGAATTTGAGAG+GGG | - | chr8.2:82761844-82761863 | MS.gene99140:CDS | 45.0% | |
| TGGAATTGAGACGTTTGGAG+TGG | + | chr8.2:82760788-82760807 | None:intergenic | 45.0% | |
| TGGTCCAAAGAAGATTGAGG+AGG | - | chr8.2:82759990-82760009 | MS.gene99140:CDS | 45.0% | |
| TGTAAGAGAGACTGAGGAGA+AGG | + | chr8.2:82761505-82761524 | None:intergenic | 45.0% | |
| TGTCCTGGAATTGAGACGTT+TGG | + | chr8.2:82760793-82760812 | None:intergenic | 45.0% | |
| TGTGCATGCTGTGTATGTGT+CGG | + | chr8.2:82761210-82761229 | None:intergenic | 45.0% | |
| TTATCTGAGCGCACACTGTA+TGG | - | chr8.2:82760102-82760121 | MS.gene99140:CDS | 45.0% | |
| TTCAAATAATCCGCAGCACC+AGG | + | chr8.2:82762459-82762478 | None:intergenic | 45.0% | |
| ! | CAAGCTGGTAGCATGGATTT+TGG | - | chr8.2:82760051-82760070 | MS.gene99140:CDS | 45.0% |
| ! | GGTGCTGCGGATTATTTGAA+TGG | - | chr8.2:82762459-82762478 | MS.gene99140:CDS | 45.0% |
| ! | GGTGTCGTCTCACAAATCTT+CGG | - | chr8.2:82759397-82759416 | MS.gene99140:CDS | 45.0% |
| ! | TCAGTTGCCTGATTTGAGTG+TGG | - | chr8.2:82761780-82761799 | MS.gene99140:CDS | 45.0% |
| ! | TGAGTTGCCTGATTTGAGTG+TGG | - | chr8.2:82759483-82759502 | MS.gene99140:intron | 45.0% |
| ! | TTCTACTAGCTTCCAGCAGA+GGG | - | chr8.2:82761471-82761490 | MS.gene99140:CDS | 45.0% |
| !! | AAATAAGGTTGATGAGGCCG+AGG | - | chr8.2:82759591-82759610 | MS.gene99140:CDS | 45.0% |
| !! | AATAAGGTTGATGAGGCCGA+GGG | - | chr8.2:82759592-82759611 | MS.gene99140:CDS | 45.0% |
| !! | AGCATGGATTTTGGTCCTAG+CGG | - | chr8.2:82760060-82760079 | MS.gene99140:CDS | 45.0% |
| !! | TGAGACGTTTGGAGTGGTTT+TGG | + | chr8.2:82760782-82760801 | None:intergenic | 45.0% |
| !! | TGTTTTTACTCCTGGTGCTG+CGG | - | chr8.2:82762446-82762465 | MS.gene99140:CDS | 45.0% |
| !!! | TTGGAGTGGTTTTGGTGCTT+GGG | + | chr8.2:82760774-82760793 | None:intergenic | 45.0% |
| !!! | TTTGGAGTGGTTTTGGTGCT+TGG | + | chr8.2:82760775-82760794 | None:intergenic | 45.0% |
| AAGGAATCAAACCCCTCTGC+TGG | + | chr8.2:82761486-82761505 | None:intergenic | 50.0% | |
| AAGGGAGCAGAGAAGAACCA+AGG | - | chr8.2:82759639-82759658 | MS.gene99140:CDS | 50.0% | |
| AGCCAGATGTGAGCAGAAGT+TGG | + | chr8.2:82759461-82759480 | None:intergenic | 50.0% | |
| ATGCAGAAGAGGCAAAGCAG+AGG | - | chr8.2:82761572-82761591 | MS.gene99140:CDS | 50.0% | |
| CAACTCTATACCCCTCTTCC+CGG | + | chr8.2:82759227-82759246 | None:intergenic | 50.0% | |
| CAAGGCTGAGAAGAAGGAAG+AGG | - | chr8.2:82759264-82759283 | MS.gene99140:CDS | 50.0% | |
| CACCCCTCTCAAATTCCTCT+TGG | + | chr8.2:82761849-82761868 | None:intergenic | 50.0% | |
| CGTCTCACAAATCTTCGGGA+AGG | - | chr8.2:82761699-82761718 | MS.gene99140:CDS | 50.0% | |
| CTAGTAGAACGTTGCCACCA+GGG | + | chr8.2:82761460-82761479 | None:intergenic | 50.0% | |
| CTTCCTTCTTCTCAGCCTTG+TGG | + | chr8.2:82759264-82759283 | None:intergenic | 50.0% | |
| GAAGTTACCAGGTCAGTGTC+AGG | - | chr8.2:82762050-82762069 | MS.gene99140:CDS | 50.0% | |
| GACAACGCAATCACTCTCAG+TGG | - | chr8.2:82761673-82761692 | MS.gene99140:CDS | 50.0% | |
| GATCCACAAGGCTGAGAAGA+AGG | - | chr8.2:82759258-82759277 | MS.gene99140:CDS | 50.0% | |
| GCCTCAACATCTTCCTCATC+AGG | + | chr8.2:82759781-82759800 | None:intergenic | 50.0% | |
| GGAAGACAATACAGACCAGG+GGG | + | chr8.2:82760931-82760950 | None:intergenic | 50.0% | |
| GGGTGAACGACAACAAGAAG+AGG | - | chr8.2:82761864-82761883 | MS.gene99140:CDS | 50.0% | |
| GGGTGAACGAGAACAAGAAG+AGG | - | chr8.2:82759567-82759586 | MS.gene99140:CDS | 50.0% | |
| TAACATGCGCCTTCTTGCCT+TGG | + | chr8.2:82759659-82759678 | None:intergenic | 50.0% | |
| TCAAGCACAAGCTGGTAGCA+TGG | - | chr8.2:82760044-82760063 | MS.gene99140:CDS | 50.0% | |
| TCAGTGTCAGGATCCTGATG+AGG | - | chr8.2:82762062-82762081 | MS.gene99140:CDS | 50.0% | |
| TCGCTGTCCACACTCAAATC+AGG | + | chr8.2:82761790-82761809 | None:intergenic | 50.0% | |
| TGACAGCTTGACCTCATCCT+CGG | + | chr8.2:82761908-82761927 | None:intergenic | 50.0% | |
| TGACATGTGCCTTCTTGCCT+TGG | + | chr8.2:82761956-82761975 | None:intergenic | 50.0% | |
| TGCCAACTTCTGCTCACATC+TGG | - | chr8.2:82759456-82759475 | MS.gene99140:CDS | 50.0% | |
| TGCCAGGAGGAATTTGAGAG+GGG | - | chr8.2:82759547-82759566 | MS.gene99140:CDS | 50.0% | |
| TGGAAAGAAATAGCCGTGCC+GGG | - | chr8.2:82759206-82759225 | MS.gene99140:CDS | 50.0% | |
| ! | AAGGCAAGAAGGCGCATGTT+AGG | - | chr8.2:82759658-82759677 | MS.gene99140:CDS | 50.0% |
| ! | AATCTTCGGGAAGGCTCTGA+TGG | - | chr8.2:82761708-82761727 | MS.gene99140:CDS | 50.0% |
| ! | GAAATTTCTGGATCCGTCCC+TGG | - | chr8.2:82761440-82761459 | MS.gene99140:CDS | 50.0% |
| ! | GTTCTACTAGCTTCCAGCAG+AGG | - | chr8.2:82761470-82761489 | MS.gene99140:CDS | 50.0% |
| ! | TCTACTAGCTTCCAGCAGAG+GGG | - | chr8.2:82761472-82761491 | MS.gene99140:CDS | 50.0% |
| ! | TCTTCCTTGTTTCTCCTCGG+AGG | - | chr8.2:82760945-82760964 | MS.gene99140:intron | 50.0% |
| !! | CACACTGTATGGCTCTAGAG+AGG | - | chr8.2:82760113-82760132 | MS.gene99140:CDS | 50.0% |
| !! | CGTTGAAGATTTTGACGCCG+AGG | - | chr8.2:82762385-82762404 | MS.gene99140:CDS | 50.0% |
| AAATAGCCGTGCCGGGAAGA+GGG | - | chr8.2:82759213-82759232 | MS.gene99140:CDS | 55.0% | |
| AAGGGAAATTCGGTCCTCCG+AGG | + | chr8.2:82760962-82760981 | None:intergenic | 55.0% | |
| CACCCCTCTCAAATTCCTCC+TGG | + | chr8.2:82759552-82759571 | None:intergenic | 55.0% | |
| GACAACGCGATCACTCTCAG+TGG | - | chr8.2:82759376-82759395 | MS.gene99140:CDS | 55.0% | |
| GACAGACCTTCAAGTCCAGC+TGG | - | chr8.2:82760159-82760178 | MS.gene99140:CDS | 55.0% | |
| GCGTGAGGTGAAGTTGCAAC+AGG | + | chr8.2:82760267-82760286 | None:intergenic | 55.0% | |
| GCTAGTAGAACGTTGCCACC+AGG | + | chr8.2:82761461-82761480 | None:intergenic | 55.0% | |
| GGCGATGAAAAGGTGGGGAT+CGG | - | chr8.2:82762314-82762333 | MS.gene99140:CDS | 55.0% | |
| TAGAACGTTGCCACCAGGGA+CGG | + | chr8.2:82761456-82761475 | None:intergenic | 55.0% | |
| TCAGGATCCTGACACTGACC+TGG | + | chr8.2:82762060-82762079 | None:intergenic | 55.0% | |
| TGACAGCTTGACCTCACCCT+CGG | + | chr8.2:82759611-82759630 | None:intergenic | 55.0% | |
| ! | ATTTCTGGATCCGTCCCTGG+TGG | - | chr8.2:82761443-82761462 | MS.gene99140:CDS | 55.0% |
| AATAGCCGTGCCGGGAAGAG+GGG | - | chr8.2:82759214-82759233 | MS.gene99140:CDS | 60.0% | |
| AGGCAGGCTCAAGCACAAGC+TGG | - | chr8.2:82760036-82760055 | MS.gene99140:CDS | 60.0% | |
| CACCTCACGCTCAGTCGCAA+GGG | - | chr8.2:82760277-82760296 | MS.gene99140:intron | 60.0% | |
| CGGTCCTCCGAGGAGAAACA+AGG | + | chr8.2:82760952-82760971 | None:intergenic | 60.0% | |
| CTATACCCCTCTTCCCGGCA+CGG | + | chr8.2:82759222-82759241 | None:intergenic | 60.0% | |
| GAAATAGCCGTGCCGGGAAG+AGG | - | chr8.2:82759212-82759231 | MS.gene99140:CDS | 60.0% | |
| TCACCTCACGCTCAGTCGCA+AGG | - | chr8.2:82760276-82760295 | MS.gene99140:intron | 60.0% | |
| !! | GGTTGATGAGGCCGAGGATG+AGG | - | chr8.2:82761894-82761913 | MS.gene99140:CDS | 60.0% |
| !! | GGTTGATGAGGCCGAGGGTG+AGG | - | chr8.2:82759597-82759616 | MS.gene99140:CDS | 65.0% |
| GGCCCTTGCGACTGAGCGTG+AGG | + | chr8.2:82760282-82760301 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 82759196 | 82762503 | 82759196 | ID=MS.gene99140 |
| chr8.2 | mRNA | 82759196 | 82762503 | 82759196 | ID=MS.gene99140.t1;Parent=MS.gene99140 |
| chr8.2 | exon | 82761323 | 82762503 | 82761323 | ID=MS.gene99140.t1.exon1;Parent=MS.gene99140.t1 |
| chr8.2 | CDS | 82761323 | 82762503 | 82761323 | ID=cds.MS.gene99140.t1;Parent=MS.gene99140.t1 |
| chr8.2 | exon | 82759784 | 82760219 | 82759784 | ID=MS.gene99140.t1.exon2;Parent=MS.gene99140.t1 |
| chr8.2 | CDS | 82759784 | 82760219 | 82759784 | ID=cds.MS.gene99140.t1;Parent=MS.gene99140.t1 |
| chr8.2 | exon | 82759521 | 82759687 | 82759521 | ID=MS.gene99140.t1.exon3;Parent=MS.gene99140.t1 |
| chr8.2 | CDS | 82759521 | 82759687 | 82759521 | ID=cds.MS.gene99140.t1;Parent=MS.gene99140.t1 |
| chr8.2 | exon | 82759196 | 82759481 | 82759196 | ID=MS.gene99140.t1.exon4;Parent=MS.gene99140.t1 |
| chr8.2 | CDS | 82759196 | 82759481 | 82759196 | ID=cds.MS.gene99140.t1;Parent=MS.gene99140.t1 |
| Gene Sequence |
| Protein sequence |
