Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99821.t1 | XP_003596635.1 | 93.6 | 220 | 11 | 1 | 1 | 220 | 1 | 217 | 1.20E-111 | 412.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99821.t1 | O48915 | 46.7 | 182 | 90 | 4 | 8 | 185 | 13 | 191 | 2.1e-35 | 150.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99821.t1 | G7IJL6 | 93.6 | 220 | 11 | 1 | 1 | 220 | 1 | 217 | 8.7e-112 | 412.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049254 | MS.gene99821 | 0.814268 | 1.68E-51 | -1.69E-46 |
MS.gene049452 | MS.gene99821 | 0.800012 | 1.76E-48 | -1.69E-46 |
MS.gene050026 | MS.gene99821 | 0.831392 | 1.71E-55 | -1.69E-46 |
MS.gene050759 | MS.gene99821 | 0.8143 | 1.65E-51 | -1.69E-46 |
MS.gene050953 | MS.gene99821 | 0.803563 | 3.28E-49 | -1.69E-46 |
MS.gene051279 | MS.gene99821 | 0.807929 | 3.98E-50 | -1.69E-46 |
MS.gene051574 | MS.gene99821 | 0.804225 | 2.39E-49 | -1.69E-46 |
MS.gene052333 | MS.gene99821 | 0.81277 | 3.59E-51 | -1.69E-46 |
MS.gene052493 | MS.gene99821 | 0.814839 | 1.26E-51 | -1.69E-46 |
MS.gene052582 | MS.gene99821 | 0.820353 | 7.18E-53 | -1.69E-46 |
MS.gene052584 | MS.gene99821 | 0.812654 | 3.80E-51 | -1.69E-46 |
MS.gene052586 | MS.gene99821 | 0.830856 | 2.32E-55 | -1.69E-46 |
MS.gene052768 | MS.gene99821 | 0.803218 | 3.87E-49 | -1.69E-46 |
MS.gene052965 | MS.gene99821 | -0.809936 | 1.48E-50 | -1.69E-46 |
MS.gene053963 | MS.gene99821 | 0.811322 | 7.42E-51 | -1.69E-46 |
MS.gene05410 | MS.gene99821 | 0.822085 | 2.86E-53 | -1.69E-46 |
MS.gene05414 | MS.gene99821 | 0.823553 | 1.30E-53 | -1.69E-46 |
MS.gene05415 | MS.gene99821 | 0.843162 | 1.66E-58 | -1.69E-46 |
MS.gene05423 | MS.gene99821 | 0.822129 | 2.79E-53 | -1.69E-46 |
MS.gene054291 | MS.gene99821 | -0.818061 | 2.39E-52 | -1.69E-46 |
MS.gene056779 | MS.gene99821 | 0.813316 | 2.72E-51 | -1.69E-46 |
MS.gene057012 | MS.gene99821 | 0.804028 | 2.63E-49 | -1.69E-46 |
MS.gene058294 | MS.gene99821 | 0.802278 | 6.05E-49 | -1.69E-46 |
MS.gene058526 | MS.gene99821 | 0.801288 | 9.67E-49 | -1.69E-46 |
MS.gene058528 | MS.gene99821 | 0.801687 | 8.01E-49 | -1.69E-46 |
MS.gene05954 | MS.gene99821 | 0.803224 | 3.86E-49 | -1.69E-46 |
MS.gene059584 | MS.gene99821 | 0.802172 | 6.36E-49 | -1.69E-46 |
MS.gene060257 | MS.gene99821 | 0.82362 | 1.26E-53 | -1.69E-46 |
MS.gene060412 | MS.gene99821 | 0.823568 | 1.29E-53 | -1.69E-46 |
MS.gene060521 | MS.gene99821 | 0.814496 | 1.50E-51 | -1.69E-46 |
MS.gene06052 | MS.gene99821 | 0.803936 | 2.75E-49 | -1.69E-46 |
MS.gene060572 | MS.gene99821 | 0.801339 | 9.44E-49 | -1.69E-46 |
MS.gene060634 | MS.gene99821 | -0.815446 | 9.21E-52 | -1.69E-46 |
MS.gene060840 | MS.gene99821 | 0.810893 | 9.19E-51 | -1.69E-46 |
MS.gene061040 | MS.gene99821 | -0.815417 | 9.35E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene031261 | MS.gene99821 | PPI |
MS.gene006756 | MS.gene99821 | PPI |
MS.gene99821 | MS.gene87282 | PPI |
MS.gene87282 | MS.gene99821 | PPI |
MS.gene031547 | MS.gene99821 | PPI |
MS.gene99821 | MS.gene031261 | PPI |
MS.gene69812 | MS.gene99821 | PPI |
MS.gene96823 | MS.gene99821 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99821.t1 | MTR_2g082990 | 93.636 | 220 | 11 | 1 | 1 | 220 | 1 | 217 | 6.59e-150 | 415 |
MS.gene99821.t1 | MTR_4g081200 | 48.276 | 203 | 99 | 4 | 8 | 207 | 11 | 210 | 1.44e-58 | 184 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99821.t1 | AT3G20600 | 42.381 | 210 | 113 | 5 | 8 | 213 | 13 | 218 | 1.47e-46 | 153 |
MS.gene99821.t1 | AT3G20590 | 41.206 | 199 | 102 | 5 | 9 | 202 | 14 | 202 | 3.87e-35 | 125 |
MS.gene99821.t1 | AT3G20610 | 34.483 | 203 | 119 | 7 | 22 | 217 | 26 | 221 | 1.31e-27 | 105 |
MS.gene99821.t1 | AT4G05220 | 22.159 | 176 | 122 | 4 | 13 | 180 | 47 | 215 | 9.99e-12 | 62.8 |
Find 61 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAATACCTTTATCTTTATT+AGG | 0.156001 | 2.3:-14635440 | None:intergenic |
TGCGGTTAAGTATAAGATTT+TGG | 0.193625 | 2.3:+14635670 | MS.gene99821:CDS |
TGGAGATTCTGGGGAGAAAA+TGG | 0.196345 | 2.3:+14635742 | MS.gene99821:CDS |
CTTGTTAATGCTACTGTAAA+TGG | 0.211165 | 2.3:+14635521 | MS.gene99821:CDS |
CATCATAACCATAGGCTTAA+TGG | 0.228595 | 2.3:+14635277 | MS.gene99821:CDS |
TGGGTCTTGTTTATTGGTCT+TGG | 0.228865 | 2.3:+14635860 | MS.gene99821:CDS |
TGATCTTGCTGTTGTGTTTA+GGG | 0.236469 | 2.3:-14635381 | None:intergenic |
AATGTGGAAATTGGAGATTC+TGG | 0.246829 | 2.3:+14635731 | MS.gene99821:CDS |
GAATACCTTTATCTTTATTA+GGG | 0.259706 | 2.3:-14635439 | None:intergenic |
TTGATCTTGCTGTTGTGTTT+AGG | 0.268959 | 2.3:-14635382 | None:intergenic |
ATCGTGCGCTTCTTGTGTTT+TGG | 0.270001 | 2.3:+14635840 | MS.gene99821:CDS |
TTGATGGTAAAGTTTATCTA+AGG | 0.284290 | 2.3:+14635633 | MS.gene99821:CDS |
GGAGGGGCAAATGTGGAAAT+TGG | 0.299189 | 2.3:+14635722 | MS.gene99821:CDS |
AAGGTGAAGTTAAGATGAAT+AGG | 0.325470 | 2.3:-14635470 | None:intergenic |
GGGTCTTGTTTATTGGTCTT+GGG | 0.348639 | 2.3:+14635861 | MS.gene99821:CDS |
AGCTGTTGTTCATGCTGTTC+AGG | 0.351132 | 2.3:+14635251 | MS.gene99821:CDS |
AATTTAACTGCGAGTGTTAA+GGG | 0.363654 | 2.3:+14635605 | MS.gene99821:CDS |
GTATGCTTAGCCATATGAAT+AGG | 0.380130 | 2.3:-14635301 | None:intergenic |
GTTAACCCTAATAAAGATAA+AGG | 0.389560 | 2.3:+14635434 | MS.gene99821:CDS |
GAATTTAACTGCGAGTGTTA+AGG | 0.395995 | 2.3:+14635604 | MS.gene99821:CDS |
AGTGTTGAGAGTATTGTAAA+AGG | 0.426836 | 2.3:-14635489 | None:intergenic |
ACTGTAAATGGATTCTATCA+AGG | 0.430123 | 2.3:+14635533 | MS.gene99821:CDS |
GGAGATTCTGGGGAGAAAAT+GGG | 0.447531 | 2.3:+14635743 | MS.gene99821:CDS |
AAAGAGATCGGGTATGGGGA+GGG | 0.451284 | 2.3:+14635705 | MS.gene99821:CDS |
AGTGTTAAGGGTGTTGTTGA+TGG | 0.454047 | 2.3:+14635617 | MS.gene99821:CDS |
GCTTAATGGCCCTATTCATA+TGG | 0.461217 | 2.3:+14635291 | MS.gene99821:CDS |
ATGTGGAAATTGGAGATTCT+GGG | 0.462099 | 2.3:+14635732 | MS.gene99821:CDS |
AGGTGAAGTTAAGATGAATA+GGG | 0.473108 | 2.3:-14635469 | None:intergenic |
GGTATGGGGAGGGGCAAATG+TGG | 0.473413 | 2.3:+14635715 | MS.gene99821:CDS |
TATGCTTAGCCATATGAATA+GGG | 0.474917 | 2.3:-14635300 | None:intergenic |
AAGAAAAGTGTGAGGCTTGG+AGG | 0.475890 | 2.3:+14635767 | MS.gene99821:CDS |
CAGCATGAACAACAGCTGTT+GGG | 0.497130 | 2.3:-14635245 | None:intergenic |
GAATAGGGCCATTAAGCCTA+TGG | 0.501191 | 2.3:-14635285 | None:intergenic |
ATACGAAAAGAGATCGGGTA+TGG | 0.508627 | 2.3:+14635699 | MS.gene99821:CDS |
AAGAATGGAGTGGTGGAAGC+TGG | 0.512376 | 2.3:+14635575 | MS.gene99821:CDS |
TCCGGCGCATGGAAAGTGTA+TGG | 0.512912 | 2.3:+14635812 | MS.gene99821:CDS |
GAACCAAGGGTGATAGTGTC+CGG | 0.513905 | 2.3:+14635794 | MS.gene99821:CDS |
AAGAGATCGGGTATGGGGAG+GGG | 0.523912 | 2.3:+14635706 | MS.gene99821:CDS |
AGAAAAGTGTGAGGCTTGGA+GGG | 0.526565 | 2.3:+14635768 | MS.gene99821:CDS |
TCAGGTTTCATCATAACCAT+AGG | 0.529456 | 2.3:+14635269 | MS.gene99821:CDS |
GGGTGATAGTGTCCGGCGCA+TGG | 0.534538 | 2.3:+14635801 | MS.gene99821:CDS |
TACGAAAAGAGATCGGGTAT+GGG | 0.536489 | 2.3:+14635700 | MS.gene99821:CDS |
ACAGCATGAACAACAGCTGT+TGG | 0.541536 | 2.3:-14635246 | None:intergenic |
TCCATACACTTTCCATGCGC+CGG | 0.542433 | 2.3:-14635813 | None:intergenic |
GGAAAGAAAAGTGTGAGGCT+TGG | 0.543228 | 2.3:+14635764 | MS.gene99821:CDS |
TTGGTATACGAAAAGAGATC+GGG | 0.544628 | 2.3:+14635694 | MS.gene99821:CDS |
AGCTAAGAAGAATGGAGTGG+TGG | 0.547361 | 2.3:+14635568 | MS.gene99821:CDS |
AAAAGAGATCGGGTATGGGG+AGG | 0.556071 | 2.3:+14635704 | MS.gene99821:CDS |
GCGCCGGACACTATCACCCT+TGG | 0.558967 | 2.3:-14635797 | None:intergenic |
CTGTAAATGGATTCTATCAA+GGG | 0.559809 | 2.3:+14635534 | MS.gene99821:CDS |
TTTGGTATACGAAAAGAGAT+CGG | 0.560749 | 2.3:+14635693 | MS.gene99821:CDS |
TGGTAAAGTTTATCTAAGGG+TGG | 0.560905 | 2.3:+14635637 | MS.gene99821:CDS |
TGATGGTAAAGTTTATCTAA+GGG | 0.567329 | 2.3:+14635634 | MS.gene99821:CDS |
TTTACAGTAGCATTAACAAG+TGG | 0.593952 | 2.3:-14635518 | None:intergenic |
ACGAAAAGAGATCGGGTATG+GGG | 0.597221 | 2.3:+14635701 | MS.gene99821:CDS |
GGCTTGGAGGGAATGAACCA+AGG | 0.634018 | 2.3:+14635780 | MS.gene99821:CDS |
GCTTGGAGGGAATGAACCAA+GGG | 0.643282 | 2.3:+14635781 | MS.gene99821:CDS |
TGTGGAAATTGGAGATTCTG+GGG | 0.648415 | 2.3:+14635733 | MS.gene99821:CDS |
AAAAGCTAAGAAGAATGGAG+TGG | 0.661701 | 2.3:+14635565 | MS.gene99821:CDS |
AAATGGGAAAGAAAAGTGTG+AGG | 0.693699 | 2.3:+14635759 | MS.gene99821:CDS |
GGCGCATGGAAAGTGTATGG+AGG | 0.700562 | 2.3:+14635815 | MS.gene99821:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAATACCTTTATCTTTATTA+GGG | - | chr2.3:14635442-14635461 | None:intergenic | 20.0% |
!! | TGAATACCTTTATCTTTATT+AGG | - | chr2.3:14635443-14635462 | None:intergenic | 20.0% |
!!! | TTAAGTATAAGATTTTGGTT+TGG | + | chr2.3:14635675-14635694 | MS.gene99821:CDS | 20.0% |
! | GTTAACCCTAATAAAGATAA+AGG | + | chr2.3:14635434-14635453 | MS.gene99821:CDS | 25.0% |
! | TGATGGTAAAGTTTATCTAA+GGG | + | chr2.3:14635634-14635653 | MS.gene99821:CDS | 25.0% |
!! | ATTTTGTCTATGTAAAGCTT+TGG | - | chr2.3:14635338-14635357 | None:intergenic | 25.0% |
!! | TTGATGGTAAAGTTTATCTA+AGG | + | chr2.3:14635633-14635652 | MS.gene99821:CDS | 25.0% |
AAGGTGAAGTTAAGATGAAT+AGG | - | chr2.3:14635473-14635492 | None:intergenic | 30.0% | |
AATTTAACTGCGAGTGTTAA+GGG | + | chr2.3:14635605-14635624 | MS.gene99821:CDS | 30.0% | |
AGGTGAAGTTAAGATGAATA+GGG | - | chr2.3:14635472-14635491 | None:intergenic | 30.0% | |
CTTGTTAATGCTACTGTAAA+TGG | + | chr2.3:14635521-14635540 | MS.gene99821:CDS | 30.0% | |
GAGAAAAAAGCTAAGAAGAA+TGG | + | chr2.3:14635560-14635579 | MS.gene99821:CDS | 30.0% | |
TATGCTTAGCCATATGAATA+GGG | - | chr2.3:14635303-14635322 | None:intergenic | 30.0% | |
TTTACAGTAGCATTAACAAG+TGG | - | chr2.3:14635521-14635540 | None:intergenic | 30.0% | |
TTTGGTATACGAAAAGAGAT+CGG | + | chr2.3:14635693-14635712 | MS.gene99821:CDS | 30.0% | |
! | ACTGTAAATGGATTCTATCA+AGG | + | chr2.3:14635533-14635552 | MS.gene99821:CDS | 30.0% |
! | CTGTAAATGGATTCTATCAA+GGG | + | chr2.3:14635534-14635553 | MS.gene99821:CDS | 30.0% |
! | TGCGGTTAAGTATAAGATTT+TGG | + | chr2.3:14635670-14635689 | MS.gene99821:CDS | 30.0% |
!! | AGTGTTGAGAGTATTGTAAA+AGG | - | chr2.3:14635492-14635511 | None:intergenic | 30.0% |
!! | GTTAACAAGTTTTAACGTGA+AGG | - | chr2.3:14635420-14635439 | None:intergenic | 30.0% |
AAAAGCTAAGAAGAATGGAG+TGG | + | chr2.3:14635565-14635584 | MS.gene99821:CDS | 35.0% | |
AATGTGGAAATTGGAGATTC+TGG | + | chr2.3:14635731-14635750 | MS.gene99821:CDS | 35.0% | |
ATGTGGAAATTGGAGATTCT+GGG | + | chr2.3:14635732-14635751 | MS.gene99821:CDS | 35.0% | |
CATCATAACCATAGGCTTAA+TGG | + | chr2.3:14635277-14635296 | MS.gene99821:CDS | 35.0% | |
GAATTTAACTGCGAGTGTTA+AGG | + | chr2.3:14635604-14635623 | MS.gene99821:CDS | 35.0% | |
GTATGCTTAGCCATATGAAT+AGG | - | chr2.3:14635304-14635323 | None:intergenic | 35.0% | |
TCAGGTTTCATCATAACCAT+AGG | + | chr2.3:14635269-14635288 | MS.gene99821:CDS | 35.0% | |
TGGTAAAGTTTATCTAAGGG+TGG | + | chr2.3:14635637-14635656 | MS.gene99821:CDS | 35.0% | |
TTGGTATACGAAAAGAGATC+GGG | + | chr2.3:14635694-14635713 | MS.gene99821:CDS | 35.0% | |
! | AAATGGGAAAGAAAAGTGTG+AGG | + | chr2.3:14635759-14635778 | MS.gene99821:CDS | 35.0% |
! | TTTTAACGTGAAGGTGATAG+TGG | - | chr2.3:14635411-14635430 | None:intergenic | 35.0% |
!! | TGATCTTGCTGTTGTGTTTA+GGG | - | chr2.3:14635384-14635403 | None:intergenic | 35.0% |
!! | TTGATCTTGCTGTTGTGTTT+AGG | - | chr2.3:14635385-14635404 | None:intergenic | 35.0% |
!!! | AAGGGTGGATTATTTTACTG+CGG | + | chr2.3:14635652-14635671 | MS.gene99821:CDS | 35.0% |
!!! | GTGTTTTGGGTCTTGTTTAT+TGG | + | chr2.3:14635854-14635873 | MS.gene99821:CDS | 35.0% |
!!! | TGTGTTTAGGGTTTTGTTGA+GGG | - | chr2.3:14635372-14635391 | None:intergenic | 35.0% |
!!! | TTGTGTTTAGGGTTTTGTTG+AGG | - | chr2.3:14635373-14635392 | None:intergenic | 35.0% |
ATACGAAAAGAGATCGGGTA+TGG | + | chr2.3:14635699-14635718 | MS.gene99821:CDS | 40.0% | |
GCTTAATGGCCCTATTCATA+TGG | + | chr2.3:14635291-14635310 | MS.gene99821:CDS | 40.0% | |
TACGAAAAGAGATCGGGTAT+GGG | + | chr2.3:14635700-14635719 | MS.gene99821:CDS | 40.0% | |
TGTGGAAATTGGAGATTCTG+GGG | + | chr2.3:14635733-14635752 | MS.gene99821:CDS | 40.0% | |
!! | AGTGTTAAGGGTGTTGTTGA+TGG | + | chr2.3:14635617-14635636 | MS.gene99821:CDS | 40.0% |
!! | GGGTCTTGTTTATTGGTCTT+GGG | + | chr2.3:14635861-14635880 | MS.gene99821:CDS | 40.0% |
!! | TGGGTCTTGTTTATTGGTCT+TGG | + | chr2.3:14635860-14635879 | MS.gene99821:CDS | 40.0% |
ACAGCATGAACAACAGCTGT+TGG | - | chr2.3:14635249-14635268 | None:intergenic | 45.0% | |
ACGAAAAGAGATCGGGTATG+GGG | + | chr2.3:14635701-14635720 | MS.gene99821:CDS | 45.0% | |
AGCTAAGAAGAATGGAGTGG+TGG | + | chr2.3:14635568-14635587 | MS.gene99821:CDS | 45.0% | |
AGCTGTTGTTCATGCTGTTC+AGG | + | chr2.3:14635251-14635270 | MS.gene99821:CDS | 45.0% | |
CAGCATGAACAACAGCTGTT+GGG | - | chr2.3:14635248-14635267 | None:intergenic | 45.0% | |
GAATAGGGCCATTAAGCCTA+TGG | - | chr2.3:14635288-14635307 | None:intergenic | 45.0% | |
! | AAGAAAAGTGTGAGGCTTGG+AGG | + | chr2.3:14635767-14635786 | MS.gene99821:CDS | 45.0% |
! | AGAAAAGTGTGAGGCTTGGA+GGG | + | chr2.3:14635768-14635787 | MS.gene99821:CDS | 45.0% |
! | ATCGTGCGCTTCTTGTGTTT+TGG | + | chr2.3:14635840-14635859 | MS.gene99821:CDS | 45.0% |
! | GGAAAGAAAAGTGTGAGGCT+TGG | + | chr2.3:14635764-14635783 | MS.gene99821:CDS | 45.0% |
! | GGAGATTCTGGGGAGAAAAT+GGG | + | chr2.3:14635743-14635762 | MS.gene99821:CDS | 45.0% |
! | TCGTGCGCTTCTTGTGTTTT+GGG | + | chr2.3:14635841-14635860 | MS.gene99821:CDS | 45.0% |
! | TGGAGATTCTGGGGAGAAAA+TGG | + | chr2.3:14635742-14635761 | MS.gene99821:CDS | 45.0% |
!!! | TTTAGGGTTTTGTTGAGGGC+AGG | - | chr2.3:14635368-14635387 | None:intergenic | 45.0% |
AAAAGAGATCGGGTATGGGG+AGG | + | chr2.3:14635704-14635723 | MS.gene99821:CDS | 50.0% | |
AAAGAGATCGGGTATGGGGA+GGG | + | chr2.3:14635705-14635724 | MS.gene99821:CDS | 50.0% | |
GCTTGGAGGGAATGAACCAA+GGG | + | chr2.3:14635781-14635800 | MS.gene99821:CDS | 50.0% | |
GGAGGGGCAAATGTGGAAAT+TGG | + | chr2.3:14635722-14635741 | MS.gene99821:CDS | 50.0% | |
TCCATACACTTTCCATGCGC+CGG | - | chr2.3:14635816-14635835 | None:intergenic | 50.0% | |
! | AAGAATGGAGTGGTGGAAGC+TGG | + | chr2.3:14635575-14635594 | MS.gene99821:CDS | 50.0% |
! | GAACCAAGGGTGATAGTGTC+CGG | + | chr2.3:14635794-14635813 | MS.gene99821:CDS | 50.0% |
AAGAGATCGGGTATGGGGAG+GGG | + | chr2.3:14635706-14635725 | MS.gene99821:CDS | 55.0% | |
GGCTTGGAGGGAATGAACCA+AGG | + | chr2.3:14635780-14635799 | MS.gene99821:CDS | 55.0% | |
! | GGCGCATGGAAAGTGTATGG+AGG | + | chr2.3:14635815-14635834 | MS.gene99821:CDS | 55.0% |
! | TCCGGCGCATGGAAAGTGTA+TGG | + | chr2.3:14635812-14635831 | MS.gene99821:CDS | 55.0% |
!!! | GGGTTTTGTTGAGGGCAGGA+AGG | - | chr2.3:14635364-14635383 | None:intergenic | 55.0% |
GGTATGGGGAGGGGCAAATG+TGG | + | chr2.3:14635715-14635734 | MS.gene99821:CDS | 60.0% | |
GCGCCGGACACTATCACCCT+TGG | - | chr2.3:14635800-14635819 | None:intergenic | 65.0% | |
! | GGGTGATAGTGTCCGGCGCA+TGG | + | chr2.3:14635801-14635820 | MS.gene99821:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 14635230 | 14635892 | 14635230 | ID=MS.gene99821 |
chr2.3 | mRNA | 14635230 | 14635892 | 14635230 | ID=MS.gene99821.t1;Parent=MS.gene99821 |
chr2.3 | exon | 14635230 | 14635892 | 14635230 | ID=MS.gene99821.t1.exon1;Parent=MS.gene99821.t1 |
chr2.3 | CDS | 14635230 | 14635892 | 14635230 | ID=cds.MS.gene99821.t1;Parent=MS.gene99821.t1 |
Gene Sequence |
Protein sequence |