AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180003696.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003696.01.T01 MTR_1g067570 93.679 965 45 1 1 965 1 949 0.0 1774
MsG0180003696.01.T01 MTR_5g042180 84.158 202 22 3 764 965 92 283 6.42e-106 330
MsG0180003696.01.T01 MTR_7g099410 26.476 1016 531 39 55 963 69 975 5.00e-36 148
MsG0180003696.01.T01 MTR_7g099410 26.627 999 517 39 72 963 5 894 8.89e-36 147
MsG0180003696.01.T01 MTR_7g022810 33.144 353 182 10 647 965 300 632 3.70e-33 137
MsG0180003696.01.T01 MTR_1g069190 26.907 472 249 19 89 513 1 423 6.89e-19 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180003696.01.T01 AT3G53540 36.961 928 474 30 78 963 61 919 2.06e-140 443
MsG0180003696.01.T01 AT3G53540 36.961 928 474 30 78 963 92 950 1.73e-139 441
MsG0180003696.01.T01 AT4G28760 31.027 477 240 16 72 502 82 515 9.75e-36 147
MsG0180003696.01.T01 AT4G28760 31.027 477 240 16 72 502 82 515 9.75e-36 147
MsG0180003696.01.T01 AT5G43880 27.027 518 232 22 78 550 66 482 5.30e-26 115
MsG0180003696.01.T01 AT5G43880 27.027 518 232 22 78 550 66 482 5.30e-26 115
MsG0180003696.01.T01 AT5G43880 27.027 518 232 22 78 550 66 482 5.30e-26 115
MsG0180003696.01.T01 AT5G43880 27.027 518 232 22 78 550 66 482 5.30e-26 115
MsG0180003696.01.T01 AT2G39435 34.050 279 159 9 707 965 190 463 1.07e-25 112
MsG0180003696.01.T01 AT2G39435 34.050 279 159 9 707 965 190 463 1.07e-25 112
MsG0180003696.01.T01 AT2G39435 34.050 279 159 9 707 965 190 463 1.07e-25 112
MsG0180003696.01.T01 AT2G39435 34.050 279 159 9 707 965 190 463 1.07e-25 112
MsG0180003696.01.T01 AT2G39435 34.050 279 159 9 707 965 190 463 1.07e-25 112
MsG0180003696.01.T01 AT2G39435 33.333 267 153 9 707 953 190 451 5.27e-22 100
MsG0180003696.01.T01 AT2G20240 25.740 439 226 14 73 484 12 377 1.16e-16 85.5

Find 226 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCAGTTCTCATTTAAATT+TGG 0.111515 1:-66793018 MsG0180003696.01.T01:intron
CTCTTCTCCTCTCCCGTTTA+AGG 0.163515 1:+66791489 None:intergenic
TCTTCCTCTCCTAGATTTAA+AGG 0.174348 1:-66792013 MsG0180003696.01.T01:CDS
TGTTGTCCTAAAACCTAATA+TGG 0.174399 1:-66792275 MsG0180003696.01.T01:CDS
TCAGCTAATAACTTCTTAAT+TGG 0.212274 1:+66792964 None:intergenic
CTAAGGGGCTCAAAGGTTTC+AGG 0.216196 1:+66791281 None:intergenic
CTGATAATAATTTGGAAGTT+TGG 0.219189 1:-66789014 MsG0180003696.01.T01:CDS
CCTGCTTCATCTACTGTCTT+TGG 0.228985 1:-66791575 MsG0180003696.01.T01:CDS
CTTCTCTTGGATTCAGTTGC+TGG 0.236414 1:+66792931 None:intergenic
TGCTCAAACTGATAATAATT+TGG 0.237442 1:-66789022 MsG0180003696.01.T01:CDS
AAGGGATCAGGAAGAATTTA+AGG 0.251312 1:-66792752 MsG0180003696.01.T01:CDS
TTCATCTAAAGATGAATAAA+TGG 0.268462 1:-66788528 MsG0180003696.01.T01:three_prime_UTR
TGCAGTTCTCATTTAAATTT+GGG 0.277047 1:-66793017 MsG0180003696.01.T01:intron
GATAGTTCAAGCAGTGCTTC+TGG 0.278337 1:-66791977 MsG0180003696.01.T01:CDS
TCATCTTGTTCTGAATGTTT+TGG 0.281356 1:-66790233 MsG0180003696.01.T01:CDS
AGAAATGCAGCCAAACCTTT+TGG 0.297212 1:-66788826 MsG0180003696.01.T01:CDS
TCGGCCCGTGTCTTAGTAAA+AGG 0.306031 1:-66791161 MsG0180003696.01.T01:CDS
TCAGCACGCAAGAATGTTCT+AGG 0.325404 1:+66791548 None:intergenic
TCCTTGTGCTGCTTGTTATT+AGG 0.326961 1:+66792853 None:intergenic
ATTGATAGTAGATGATTTAG+TGG 0.328822 1:-66788647 MsG0180003696.01.T01:CDS
TTCACCCAATCTTGAGGTTC+AGG 0.330620 1:-66791306 MsG0180003696.01.T01:CDS
ATGTTCAAAGTTCTCCATAT+TGG 0.331456 1:+66792432 None:intergenic
TCAGCATGATTTCCATGTTC+TGG 0.336312 1:+66792193 None:intergenic
CTCTCCCGTTTAAGGTCCTT+TGG 0.339239 1:+66791497 None:intergenic
TCTTCGGATAAGGTTCTTCC+TGG 0.346250 1:-66791188 MsG0180003696.01.T01:CDS
TTCTGAATCTTCTTCGGATA+AGG 0.357900 1:-66791198 MsG0180003696.01.T01:CDS
TACCAGTTTCCTTACCTTGT+AGG 0.359838 1:+66790195 None:intergenic
ACTTCGTAATGATCGATATA+TGG 0.362032 1:-66791522 MsG0180003696.01.T01:CDS
TACCTACCACTCTCTACCTT+TGG 0.370274 1:+66792706 None:intergenic
CTAGAGTATCCTTTAAATCT+AGG 0.370791 1:+66792004 None:intergenic
AAAGTTGCTGTTATTTCCTC+TGG 0.371025 1:+66791944 None:intergenic
TGTTAGAAGGAAATACATTA+TGG 0.371730 1:-66789110 MsG0180003696.01.T01:CDS
ATTCATTGAACAGAAGTTCA+TGG 0.372969 1:-66792644 MsG0180003696.01.T01:CDS
AGAGATGACATTGATGTAAT+AGG 0.373309 1:-66788685 MsG0180003696.01.T01:CDS
TTCCTTGGTTCCCTAGCATC+TGG 0.374335 1:+66788767 None:intergenic
TTGATACGTCGCTAGGCGTT+TGG 0.375451 1:+66792618 None:intergenic
TCATGTAGAACCAACCAATA+TGG 0.376303 1:-66792446 MsG0180003696.01.T01:CDS
TGTTTCTGTGTTTGAAGATC+TGG 0.379454 1:-66788968 MsG0180003696.01.T01:CDS
CATCATCCTCTACCTTTCCT+TGG 0.391677 1:+66788752 None:intergenic
GCATTTCTCACCCATGGCTG+TGG 0.400191 1:+66788841 None:intergenic
GTGGAAATCTTCTAAACAAT+CGG 0.401053 1:-66792995 MsG0180003696.01.T01:CDS
GGGTGAATCTTCTTCAAGAT+TGG 0.403956 1:+66791322 None:intergenic
CAGATTCCAACTTCAGCAAC+TGG 0.404643 1:+66789199 None:intergenic
AACACCTGGGGATCTTCTCT+TGG 0.405633 1:+66792918 None:intergenic
AGAGGAAATAACAGCAACTT+TGG 0.406142 1:-66791942 MsG0180003696.01.T01:CDS
GTGATTTGACAACTTGTTCA+AGG 0.407112 1:-66788933 MsG0180003696.01.T01:CDS
ATTTGGACAAATAGATTATG+AGG 0.408517 1:-66788491 MsG0180003696.01.T01:three_prime_UTR
ACCCCTTTCCAATCACATTC+CGG 0.411094 1:-66792469 MsG0180003696.01.T01:CDS
ATTTCAATTTGAGGTCAGAT+AGG 0.413621 1:-66792408 MsG0180003696.01.T01:CDS
AATTCTAGAAGCACAATATC+TGG 0.414534 1:-66791434 MsG0180003696.01.T01:CDS
GAGGATGTGAATAAGTTTAG+TGG 0.416713 1:-66788472 None:intergenic
TGGTGCCAAAGGACCTTAAA+CGG 0.420078 1:-66791502 MsG0180003696.01.T01:CDS
TGGGCCTTCTGAATCTTCTT+CGG 0.420630 1:-66791204 MsG0180003696.01.T01:CDS
AGGAGCCTGAACCTCAAGAT+TGG 0.421532 1:+66791301 None:intergenic
GAAGGATCAAGAACTGAGAT+TGG 0.422245 1:+66790272 None:intergenic
ACCTACCACTCTCTACCTTT+GGG 0.426395 1:+66792707 None:intergenic
AGCCAATGTGCTGCTCCTGC+TGG 0.428930 1:+66791787 None:intergenic
TTCTGAGTTGGTTGAACCAC+TGG 0.431879 1:-66791663 MsG0180003696.01.T01:CDS
TAGGAGGAGCTCAAGGGATC+AGG 0.437081 1:-66792764 MsG0180003696.01.T01:CDS
AGAATTTAAGGATGTATTTG+AGG 0.444098 1:-66792740 MsG0180003696.01.T01:CDS
ATAGTTCAAGCAGTGCTTCT+GGG 0.448499 1:-66791976 MsG0180003696.01.T01:CDS
GACGTATCAGCTGGTTCTAC+TGG 0.450301 1:-66790371 MsG0180003696.01.T01:CDS
GTATCTTCTGAAATGTTAGA+AGG 0.450334 1:-66789123 MsG0180003696.01.T01:CDS
TTGAACATGATTTCAATTTG+AGG 0.450676 1:-66792417 MsG0180003696.01.T01:CDS
CAACAGGGGTGAATTACAAC+AGG 0.452060 1:-66792381 MsG0180003696.01.T01:CDS
GTATTCATCTTCAGATTTGA+AGG 0.452350 1:-66792686 MsG0180003696.01.T01:CDS
TATGGAGAACTGAAGATAGC+TGG 0.453058 1:-66789092 MsG0180003696.01.T01:CDS
CTACATGACCGGAATGTGAT+TGG 0.453884 1:+66792461 None:intergenic
ACCTTGAGGAAGATGAAGCT+TGG 0.454666 1:+66793939 None:intergenic
TTGGCTGCATTTCTCACCCA+TGG 0.454936 1:+66788835 None:intergenic
AGGTCAGATAGGGAGTCAAC+AGG 0.455232 1:-66792397 MsG0180003696.01.T01:CDS
GTCTGTGCATTCACTGAAGC+AGG 0.455725 1:-66791396 MsG0180003696.01.T01:CDS
CAGCATGGAGATTCATGTCC+AGG 0.460685 1:+66790317 None:intergenic
CTCTCTGAAGCACCTGTACC+TGG 0.463051 1:-66790335 MsG0180003696.01.T01:CDS
TCTCCTGATTCTAGTTTCTC+CGG 0.466591 1:-66793246 MsG0180003696.01.T01:CDS
AAAGGTAGAGGATGATGTCC+TGG 0.466697 1:-66788746 MsG0180003696.01.T01:CDS
CCGGGAGAATAGTTGTCCTT+AGG 0.466746 1:-66788591 MsG0180003696.01.T01:three_prime_UTR
GACCGGAATGTGATTGGAAA+GGG 0.468052 1:+66792467 None:intergenic
CTAAAAGACCTTGCACTGTC+AGG 0.468134 1:+66792118 None:intergenic
TCATAAACAGCAACAGCATC+CGG 0.477893 1:-66793274 MsG0180003696.01.T01:CDS
TGTTTGAAGATCTGGAAGAT+AGG 0.481147 1:-66788960 MsG0180003696.01.T01:CDS
GACAGCCTGCCTAGCGGGGA+AGG 0.481337 1:-66791719 MsG0180003696.01.T01:CDS
TATCAAATGAAAACACTGTT+GGG 0.482329 1:-66791223 MsG0180003696.01.T01:CDS
GAGGAAATAACAGCAACTTT+GGG 0.485008 1:-66791941 MsG0180003696.01.T01:CDS
GCAACTCCAGTTGCTGAAGT+TGG 0.486560 1:-66789205 MsG0180003696.01.T01:CDS
GTACCCTTCATTCTCTTACC+AGG 0.488941 1:+66791749 None:intergenic
CTACGTCTATTTAAGTCAAA+CGG 0.489193 1:+66791914 None:intergenic
ACAACAATCTTTGACGATCT+AGG 0.490098 1:+66792292 None:intergenic
AGGTGTTATAGCTAGATTGA+TGG 0.492264 1:-66792902 MsG0180003696.01.T01:CDS
AAGACACGGGCCGATGATCC+AGG 0.492746 1:+66791170 None:intergenic
CAACGGCGAACCTTCTGAGT+TGG 0.495337 1:-66791675 MsG0180003696.01.T01:CDS
TGAAACCTTCCCCGCTAGGC+AGG 0.495785 1:+66791714 None:intergenic
CCTAGTGATGTAAATCAAGT+AGG 0.498130 1:-66788562 MsG0180003696.01.T01:three_prime_UTR
CCTACTTGATTTACATCACT+AGG 0.499698 1:+66788562 None:intergenic
CTAGAATCAGGAGAGAAATC+CGG 0.500407 1:+66793255 None:intergenic
CCACCGGAGAAACTAGAATC+AGG 0.500712 1:+66793243 None:intergenic
CCTAAGGACAACTATTCTCC+CGG 0.501684 1:+66788591 None:intergenic
GATCGTCTAGGAGGAGCTCA+AGG 0.502385 1:-66792771 MsG0180003696.01.T01:CDS
GACAGATCATCTGTAAAAGA+AGG 0.502791 1:+66790254 None:intergenic
ATTGGTTGGTTCTACATGAC+CGG 0.509610 1:+66792450 None:intergenic
AAGAGGTGCAAGGCACCAGC+AGG 0.509861 1:-66791802 MsG0180003696.01.T01:CDS
CGAAGAAAATTCAATGCAAG+AGG 0.512210 1:-66791120 MsG0180003696.01.T01:intron
AAGCATCGCGATGGTTATCA+TGG 0.515516 1:-66792349 MsG0180003696.01.T01:CDS
TTTCTCTGCAACCTTGCCAC+CGG 0.516407 1:+66793227 None:intergenic
GGAGCCTGAACCTCAAGATT+GGG 0.516857 1:+66791302 None:intergenic
TTCTAGTTTCTCCGGTGGCA+AGG 0.517530 1:-66793238 MsG0180003696.01.T01:CDS
ATTATCAGAGAGGTGGAAGA+TGG 0.517782 1:-66791837 MsG0180003696.01.T01:CDS
ATATTTCAGGACGTATCAGC+TGG 0.518195 1:-66790380 MsG0180003696.01.T01:intron
GCTAGATTGATGGGTCTTGA+CGG 0.518416 1:-66792892 MsG0180003696.01.T01:CDS
TCATTGAAACCTTCCCCGCT+AGG 0.518789 1:+66791710 None:intergenic
GCTGATATGCTAGCGTTCCC+TGG 0.518873 1:-66791767 MsG0180003696.01.T01:CDS
GTATCAAATGAAAACACTGT+TGG 0.522003 1:-66791224 MsG0180003696.01.T01:CDS
CTGGGTATCAGCAGCAAGGA+TGG 0.522721 1:-66791644 MsG0180003696.01.T01:CDS
CCAACGCCTCAAGTGTATCA+TGG 0.523411 1:+66792572 None:intergenic
GTTGTCCTAAAACCTAATAT+GGG 0.523452 1:-66792274 MsG0180003696.01.T01:CDS
CCATGATACACTTGAGGCGT+TGG 0.524158 1:-66792572 MsG0180003696.01.T01:CDS
CATTTCTCACCCATGGCTGT+GGG 0.524711 1:+66788842 None:intergenic
ATCAATCTAGCTATAACACC+TGG 0.525093 1:+66792904 None:intergenic
GGTGCCAAAGGACCTTAAAC+GGG 0.527205 1:-66791501 MsG0180003696.01.T01:CDS
CAACTTGTTCAAGGTCTGAA+AGG 0.527539 1:-66788924 MsG0180003696.01.T01:CDS
ATCAAGAACTGAGATTGGAC+TGG 0.529259 1:+66790277 None:intergenic
GGAGATTCATGTCCAGGTAC+AGG 0.532375 1:+66790323 None:intergenic
TGGAAATCTTCTAAACAATC+GGG 0.532665 1:-66792994 MsG0180003696.01.T01:CDS
TTTATCTCTAAGGGGCTCAA+AGG 0.532888 1:+66791274 None:intergenic
TTTCAATTTGAGGTCAGATA+GGG 0.533938 1:-66792407 MsG0180003696.01.T01:CDS
TATCTGGTCACAAGAAGTCT+TGG 0.534254 1:-66791418 MsG0180003696.01.T01:CDS
ATCTACTGACCCACAGCCAT+GGG 0.534736 1:-66788851 MsG0180003696.01.T01:CDS
CAAGGTTGCAGAGAAAGATT+CGG 0.535082 1:-66793220 MsG0180003696.01.T01:intron
CCAAAGACAGTAGATGAAGC+AGG 0.535618 1:+66791575 None:intergenic
GGTGTTATAGCTAGATTGAT+GGG 0.536964 1:-66792901 MsG0180003696.01.T01:CDS
CTAAGGACAACTATTCTCCC+GGG 0.537637 1:+66788592 None:intergenic
TTCTGCTAAAATACTTCAAG+CGG 0.538802 1:-66792534 MsG0180003696.01.T01:CDS
ATGATTAACGGGCTTCAAGA+TGG 0.541073 1:-66788796 MsG0180003696.01.T01:CDS
TACCCTTCATTCTCTTACCA+GGG 0.542493 1:+66791750 None:intergenic
TCAAAGTTCTCCATATTGGT+TGG 0.546294 1:+66792436 None:intergenic
GGTCAGATAGGGAGTCAACA+GGG 0.546327 1:-66792396 MsG0180003696.01.T01:CDS
AGAAAATTATGCGGAGAACA+AGG 0.550019 1:+66792217 None:intergenic
CACCAGCAGGAGCAGCACAT+TGG 0.551873 1:-66791789 MsG0180003696.01.T01:CDS
TAAGGTTCTTCCTGGATCAT+CGG 0.551990 1:-66791180 MsG0180003696.01.T01:CDS
CTAGTGATGTAAATCAAGTA+GGG 0.553151 1:-66788561 MsG0180003696.01.T01:three_prime_UTR
CCTCAATCAGCAACTTGCCC+AGG 0.553535 1:+66788728 None:intergenic
TAAATTTGCCTGACAGTGCA+AGG 0.555917 1:-66792126 MsG0180003696.01.T01:CDS
CCTGGGCAAGTTGCTGATTG+AGG 0.558438 1:-66788728 MsG0180003696.01.T01:CDS
AGCAGAGGAACGGCAAATGA+CGG 0.558914 1:-66792796 MsG0180003696.01.T01:CDS
ATGGAGAACTGAAGATAGCT+GGG 0.559618 1:-66789091 MsG0180003696.01.T01:CDS
TCATCTTCAGATTTGAAGGA+CGG 0.560308 1:-66792682 MsG0180003696.01.T01:CDS
GTATCAGCAGCAAGGATGGT+TGG 0.563267 1:-66791640 MsG0180003696.01.T01:CDS
TTGTTATTAGGCTGCTGAGA+TGG 0.565145 1:+66792865 None:intergenic
AATGATAAGTTTGCTCGCAA+CGG 0.566185 1:-66791692 MsG0180003696.01.T01:CDS
GTTCCCTGGTAAGAGAATGA+AGG 0.568397 1:-66791753 MsG0180003696.01.T01:CDS
TCCAAGCTTCATCTTCCTCA+AGG 0.569914 1:-66793940 MsG0180003696.01.T01:intron
AGAAGAGATTATCAGAGAGG+TGG 0.574106 1:-66791844 MsG0180003696.01.T01:CDS
AGGAAGATGAAGCTTGGAGT+TGG 0.574342 1:+66793945 None:intergenic
AATCTACTGACCCACAGCCA+TGG 0.575881 1:-66788852 MsG0180003696.01.T01:CDS
AGTTGCTGATTGAGGAGTCT+CGG 0.577954 1:-66788720 MsG0180003696.01.T01:CDS
GCCTAATAACAAGCAGCACA+AGG 0.581754 1:-66792854 MsG0180003696.01.T01:CDS
AGTTCTCATTTAAATTTGGG+TGG 0.584733 1:-66793014 MsG0180003696.01.T01:CDS
TCTGAGTTGGTTGAACCACT+GGG 0.584863 1:-66791662 MsG0180003696.01.T01:CDS
CAAAGGACCTTAAACGGGAG+AGG 0.584910 1:-66791496 MsG0180003696.01.T01:CDS
AGAAGATTCACCCAATCTTG+AGG 0.585560 1:-66791312 MsG0180003696.01.T01:CDS
TCAAGAACTGAGATTGGACT+GGG 0.587958 1:+66790278 None:intergenic
GTATCAGCTGGTTCTACTGG+TGG 0.588755 1:-66790368 MsG0180003696.01.T01:CDS
TCCCAAAGGTAGAGAGTGGT+AGG 0.589898 1:-66792708 MsG0180003696.01.T01:CDS
TTCCCTGGTAAGAGAATGAA+GGG 0.592385 1:-66791752 MsG0180003696.01.T01:CDS
TGACCGGAATGTGATTGGAA+AGG 0.595190 1:+66792466 None:intergenic
CTAGTTTCAAGTGACGAAGA+TGG 0.596738 1:-66789153 MsG0180003696.01.T01:CDS
TGATCGATATATGGTGCCAA+AGG 0.596759 1:-66791513 MsG0180003696.01.T01:CDS
AGGGAACCAAGGAAAGGTAG+AGG 0.597684 1:-66788758 MsG0180003696.01.T01:CDS
TTCCAGATGCTAGGGAACCA+AGG 0.597921 1:-66788769 MsG0180003696.01.T01:CDS
CAAATGACGGCCGATCGTCT+AGG 0.598475 1:-66792783 MsG0180003696.01.T01:CDS
TGATCAGCATCTTTACAGCA+TGG 0.598824 1:+66790302 None:intergenic
TCAGCAGCAAGGATGGTTGG+AGG 0.599245 1:-66791637 MsG0180003696.01.T01:CDS
GATTTAGTGGCAGAAATAGT+CGG 0.599671 1:-66788634 MsG0180003696.01.T01:CDS
CAAAGAAGAGATTATCAGAG+AGG 0.605669 1:-66791847 MsG0180003696.01.T01:CDS
TTCAAGTGACGAAGATGGCG+TGG 0.605966 1:-66789148 MsG0180003696.01.T01:CDS
CATCACTAGGAAACATCCTA+AGG 0.606274 1:+66788575 None:intergenic
GAATCCAAGAGAAGATCCCC+AGG 0.606684 1:-66792922 MsG0180003696.01.T01:CDS
GAAAATCTTGATACGTCGCT+AGG 0.608770 1:+66792611 None:intergenic
TCAATCTAGCTATAACACCT+GGG 0.609545 1:+66792905 None:intergenic
CAGCAGCAAGGATGGTTGGA+GGG 0.612392 1:-66791636 MsG0180003696.01.T01:CDS
CATGTATTAGTAGTTTGTCA+AGG 0.613209 1:-66791610 MsG0180003696.01.T01:CDS
TCAAACACAGAAACACTCAC+AGG 0.614246 1:+66788976 None:intergenic
AAGGTAGAGGATGATGTCCT+GGG 0.615193 1:-66788745 MsG0180003696.01.T01:CDS
AGTGTCAGTGCTGACCTACA+AGG 0.615243 1:-66790209 MsG0180003696.01.T01:intron
CTAGCATAGGTCCCTCCACA+TGG 0.618293 1:+66789172 None:intergenic
TGAATCATCTGTGAGTAGAG+AGG 0.619779 1:-66791870 MsG0180003696.01.T01:CDS
TCGTCACTTGAAACTAGCAT+AGG 0.622726 1:+66789159 None:intergenic
TTGAGCTCCTCCTAGACGAT+CGG 0.626010 1:+66792773 None:intergenic
AAATTGCAAAGGAAGTAACT+AGG 0.628658 1:-66792072 MsG0180003696.01.T01:CDS
GAGATCCCAAAGGTAGAGAG+TGG 0.629561 1:-66792712 MsG0180003696.01.T01:CDS
TGACAATTCCTGAATTGATG+CGG 0.632177 1:+66788887 None:intergenic
CCTGATTCTAGTTTCTCCGG+TGG 0.633485 1:-66793243 MsG0180003696.01.T01:CDS
GGAATCTAGAGAAATTGCAA+AGG 0.633666 1:-66792083 MsG0180003696.01.T01:CDS
TGAGGCGTTGGACTCTAACA+AGG 0.635888 1:-66792560 MsG0180003696.01.T01:CDS
TTTCATCAGAAGCATCGCGA+TGG 0.636867 1:-66792358 MsG0180003696.01.T01:CDS
AAATCTTCTAAACAATCGGG+TGG 0.637998 1:-66792991 MsG0180003696.01.T01:CDS
TAAGGACAACTATTCTCCCG+GGG 0.642645 1:+66788593 None:intergenic
GATGCTAGGGAACCAAGGAA+AGG 0.644912 1:-66788764 MsG0180003696.01.T01:CDS
GTATCCTTTAAATCTAGGAG+AGG 0.646624 1:+66792009 None:intergenic
GGAATCTGAAGACCATGTGG+AGG 0.646710 1:-66789184 MsG0180003696.01.T01:CDS
AGTGGTTCAACCAACTCAGA+AGG 0.647689 1:+66791665 None:intergenic
ATGACGGCCGATCGTCTAGG+AGG 0.649553 1:-66792780 MsG0180003696.01.T01:CDS
ATCGTCTAGGAGGAGCTCAA+GGG 0.651662 1:-66792770 MsG0180003696.01.T01:CDS
ACCACTGGGTATCAGCAGCA+AGG 0.651868 1:-66791648 MsG0180003696.01.T01:CDS
GATGGCACACAAGTCTCAAG+AGG 0.654613 1:-66791819 MsG0180003696.01.T01:CDS
CACAAGTCTCAAGAGGTGCA+AGG 0.655382 1:-66791812 MsG0180003696.01.T01:CDS
TCCTTGCTGCTGATACCCAG+TGG 0.657434 1:+66791647 None:intergenic
TTCTGGGAATGAATCTCCAG+AGG 0.661179 1:-66791960 MsG0180003696.01.T01:CDS
CAAACACAGAAACACTCACA+GGG 0.661315 1:+66788977 None:intergenic
GAATCTGAAGACCATGTGGA+GGG 0.661775 1:-66789183 MsG0180003696.01.T01:CDS
ACCGGAATGTGATTGGAAAG+GGG 0.664557 1:+66792468 None:intergenic
GTCAGATAGGGAGTCAACAG+GGG 0.667063 1:-66792395 MsG0180003696.01.T01:CDS
AAGAGTCTTGATCATAGACA+TGG 0.675010 1:-66791461 MsG0180003696.01.T01:CDS
ACTTAAATAGACGTAGCAGA+CGG 0.675436 1:-66791907 MsG0180003696.01.T01:CDS
CAATCTAGCTATAACACCTG+GGG 0.676866 1:+66792906 None:intergenic
CAGGTACAGGTGCTTCAGAG+AGG 0.687176 1:+66790336 None:intergenic
TTATCCGAAGAAGATTCAGA+AGG 0.687645 1:+66791200 None:intergenic
GATGAAGCTTGGAGTTGGTG+CGG 0.700561 1:+66793950 None:intergenic
TGCTGATTGAGGAGTCTCGG+TGG 0.702994 1:-66788717 MsG0180003696.01.T01:CDS
GTTGGAATCTGAAGACCATG+TGG 0.720815 1:-66789187 MsG0180003696.01.T01:CDS
AATATGGGAAAATTTCAGAG+TGG 0.723259 1:-66792259 MsG0180003696.01.T01:CDS
TGTTCTGGCAGAAAATTATG+CGG 0.723663 1:+66792208 None:intergenic
TGAGGTCTCAGAGATCCCAA+AGG 0.724251 1:-66792722 MsG0180003696.01.T01:CDS
AGAGTTCCATGATACACTTG+AGG 0.730462 1:-66792578 MsG0180003696.01.T01:CDS
AAGGACAACTATTCTCCCGG+GGG 0.774055 1:+66788594 None:intergenic
ACAGATGATTCACTAGAACG+CGG 0.780245 1:+66791881 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAGAAATGTATAAATAA+GGG + Chr1:66791651-66791670 None:intergenic 10.0%
!! TAAAAATAACAAAAATAACA+CGG + Chr1:66789359-66789378 None:intergenic 10.0%
!! TATTAAGAAATGTATAAATA+AGG + Chr1:66791652-66791671 None:intergenic 10.0%
!!! AAATTTTATGAGAAATTATT+TGG + Chr1:66791499-66791518 None:intergenic 10.0%
!!! ATTTTAATTTGATTTCATTA+AGG - Chr1:66788724-66788743 MsG0180003696.01.T01:CDS 10.0%
!! AAAAAAAGCAGAAAAAAATT+TGG + Chr1:66788855-66788874 None:intergenic 15.0%
!! AAAAAATAATCAAATTCTCA+AGG + Chr1:66791782-66791801 None:intergenic 15.0%
!! AAATATTAATAGCAACAAAA+TGG + Chr1:66791871-66791890 None:intergenic 15.0%
!! AATATTAATAGCAACAAAAT+GGG + Chr1:66791870-66791889 None:intergenic 15.0%
!! ATAAACATATCAAAATAACA+TGG + Chr1:66791363-66791382 None:intergenic 15.0%
!! ATGGTTAAATAATAAATTTG+TGG + Chr1:66792680-66792699 None:intergenic 15.0%
!!! TGGATAATAATATTTTCATT+TGG - Chr1:66793937-66793956 MsG0180003696.01.T01:intron 15.0%
!!! TGTTGTTTAATTTATTTTCA+GGG - Chr1:66789137-66789156 MsG0180003696.01.T01:CDS 15.0%
!!! TTGTTGTTTAATTTATTTTC+AGG - Chr1:66789136-66789155 MsG0180003696.01.T01:CDS 15.0%
!! AAAATGTATGATTAAGTCTA+AGG + Chr1:66791918-66791937 None:intergenic 20.0%
!! AATATTTCAAAGTTCTGTTA+AGG - Chr1:66792011-66792030 MsG0180003696.01.T01:CDS 20.0%
!! ATATTTCAAAGTTCTGTTAA+GGG - Chr1:66792012-66792031 MsG0180003696.01.T01:CDS 20.0%
!! ATGTAAAGTTTCAAAAACAT+TGG - Chr1:66791809-66791828 MsG0180003696.01.T01:CDS 20.0%
!! CAATTATGAATCCAAATATA+AGG + Chr1:66792321-66792340 None:intergenic 20.0%
!! GTAATATTAAACCCTATTTA+TGG - Chr1:66792423-66792442 MsG0180003696.01.T01:CDS 20.0%
!! TAAAAAAGTAAAAGGTGAAA+AGG + Chr1:66788624-66788643 None:intergenic 20.0%
!! TAAAATTACTTCAATTTGCA+TGG - Chr1:66792566-66792585 MsG0180003696.01.T01:CDS 20.0%
!! TGAGAAATTATTTGGTTAAT+TGG + Chr1:66791491-66791510 None:intergenic 20.0%
!! TGATATTGTTGTAATATTTC+AGG - Chr1:66792052-66792071 MsG0180003696.01.T01:CDS 20.0%
!! TTATTATTTAACCATAGCAA+GGG - Chr1:66792685-66792704 MsG0180003696.01.T01:CDS 20.0%
!! TTCATCTAAAGATGAATAAA+TGG - Chr1:66793917-66793936 MsG0180003696.01.T01:intron 20.0%
!! TTTATTATTTAACCATAGCA+AGG - Chr1:66792684-66792703 MsG0180003696.01.T01:CDS 20.0%
!! TTTGGATCAAAAATGATTAA+CGG - Chr1:66793637-66793656 MsG0180003696.01.T01:intron 20.0%
!!! AACCTTTCATCAATTTTTTA+TGG - Chr1:66793076-66793095 MsG0180003696.01.T01:intron 20.0%
!!! ATTTTGAACTTCATTTAAGT+CGG + Chr1:66791093-66791112 None:intergenic 20.0%
!!! TATAGCTAGAATTTAGAATA+AGG - Chr1:66789291-66789310 MsG0180003696.01.T01:intron 20.0%
!!! TATTGAATGAATCTAAAACA+TGG + Chr1:66792830-66792849 None:intergenic 20.0%
!!! TTAATCATTTTTGATCCAAA+AGG + Chr1:66793637-66793656 None:intergenic 20.0%
!!! TTTTATTATTGTCAAGAATG+TGG + Chr1:66792551-66792570 None:intergenic 20.0%
! AAATTACTAGAATCAATGCA+AGG + Chr1:66789047-66789066 None:intergenic 25.0%
! AACCTTTAACCTTCATATAT+AGG + Chr1:66792453-66792472 None:intergenic 25.0%
! AATAACAGTTCATTACAACA+AGG + Chr1:66793202-66793221 None:intergenic 25.0%
! AATGAACTGTTATTGTTGAT+AGG - Chr1:66793208-66793227 MsG0180003696.01.T01:intron 25.0%
! AGAATTTAAGGATGTATTTG+AGG - Chr1:66789705-66789724 MsG0180003696.01.T01:intron 25.0%
! AGAGATGATTAAGTAACTAA+AGG + Chr1:66792347-66792366 None:intergenic 25.0%
! ATATAGGATGTCCATAAATA+GGG + Chr1:66792437-66792456 None:intergenic 25.0%
! ATCCTATATATGAAGGTTAA+AGG - Chr1:66792448-66792467 MsG0180003696.01.T01:CDS 25.0%
! ATGAACTGTTATTGTTGATA+GGG - Chr1:66793209-66793228 MsG0180003696.01.T01:intron 25.0%
! ATTTGGACAAATAGATTATG+AGG - Chr1:66793954-66793973 MsG0180003696.01.T01:CDS 25.0%
! CAGATAAAAGAACTAAGAAT+AGG + Chr1:66791741-66791760 None:intergenic 25.0%
! CATTCAATAAATGATGTATG+TGG - Chr1:66792841-66792860 MsG0180003696.01.T01:CDS 25.0%
! CTCCATAAAAAATTGATGAA+AGG + Chr1:66793081-66793100 None:intergenic 25.0%
! CTGATAATAATTTGGAAGTT+TGG - Chr1:66793431-66793450 MsG0180003696.01.T01:intron 25.0%
! TATATAGGATGTCCATAAAT+AGG + Chr1:66792438-66792457 None:intergenic 25.0%
! TATCAAATGAAAACACTGTT+GGG - Chr1:66791222-66791241 MsG0180003696.01.T01:CDS 25.0%
! TCAGCTAATAACTTCTTAAT+TGG + Chr1:66789484-66789503 None:intergenic 25.0%
! TGCAGTTCTCATTTAAATTT+GGG - Chr1:66789428-66789447 MsG0180003696.01.T01:intron 25.0%
! TGCTCAAACTGATAATAATT+TGG - Chr1:66793423-66793442 MsG0180003696.01.T01:intron 25.0%
! TGTTAGAAGGAAATACATTA+TGG - Chr1:66793335-66793354 MsG0180003696.01.T01:CDS 25.0%
! TTCATAACCAAAAGTGAAAA+AGG + Chr1:66789264-66789283 None:intergenic 25.0%
! TTGAACATGATTTCAATTTG+AGG - Chr1:66790028-66790047 MsG0180003696.01.T01:intron 25.0%
! TTGCAGTTCTCATTTAAATT+TGG - Chr1:66789427-66789446 MsG0180003696.01.T01:intron 25.0%
! TTGGATCAAAAATGATTAAC+GGG - Chr1:66793638-66793657 MsG0180003696.01.T01:intron 25.0%
!! AAACAACACTTTTATCTCTA+AGG + Chr1:66791184-66791203 None:intergenic 25.0%
!! AACAACACTTTTATCTCTAA+GGG + Chr1:66791183-66791202 None:intergenic 25.0%
!! ATTGATAGTAGATGATTTAG+TGG - Chr1:66793798-66793817 MsG0180003696.01.T01:intron 25.0%
!! ATTTTCCCATATTAGGTTTT+AGG + Chr1:66790179-66790198 None:intergenic 25.0%
!! ATTTTGCACAATTGTTTAGA+TGG - Chr1:66791887-66791906 MsG0180003696.01.T01:CDS 25.0%
!! TTTTGAACTTCATTTAAGTC+GGG + Chr1:66791092-66791111 None:intergenic 25.0%
!! TTTTTGCTTATATTTGTGAC+CGG - Chr1:66792915-66792934 MsG0180003696.01.T01:CDS 25.0%
!! TTTTTGCTTATATTTGTGAC+CGG + Chr1:66792934-66792915 None:intergenic 25.0%
!!! AGATTGATGACGTAATTATT+AGG + Chr1:66792749-66792768 None:intergenic 25.0%
!!! GCTTTTTTTTAACTTTTCTG+CGG - Chr1:66788866-66788885 MsG0180003696.01.T01:CDS 25.0%
!!! GTTTTTTCCTTTTTCACTTT+TGG - Chr1:66789254-66789273 MsG0180003696.01.T01:intron 25.0%
AAAATTCAATGCAAGAGGTT+AGG - Chr1:66791330-66791349 MsG0180003696.01.T01:CDS 30.0%
AAATTGCAAAGGAAGTAACT+AGG - Chr1:66790373-66790392 MsG0180003696.01.T01:CDS 30.0%
AAATTGCCAAATCTATGATC+TGG - Chr1:66791569-66791588 MsG0180003696.01.T01:CDS 30.0%
AATATGGGAAAATTTCAGAG+TGG - Chr1:66790186-66790205 MsG0180003696.01.T01:intron 30.0%
ACTTCGTAATGATCGATATA+TGG - Chr1:66790923-66790942 MsG0180003696.01.T01:intron 30.0%
AGAGATGACATTGATGTAAT+AGG - Chr1:66793760-66793779 MsG0180003696.01.T01:intron 30.0%
AGTTCTCATTTAAATTTGGG+TGG - Chr1:66789431-66789450 MsG0180003696.01.T01:intron 30.0%
ATGAAAAACAATCTGAGCAA+TGG - Chr1:66790399-66790418 MsG0180003696.01.T01:intron 30.0%
ATGAATCCAAATATAAGGTG+AGG + Chr1:66792316-66792335 None:intergenic 30.0%
ATGGTATGTAATGTAGAAAG+TGG - Chr1:66792594-66792613 MsG0180003696.01.T01:CDS 30.0%
ATGTTCAAAGTTCTCCATAT+TGG + Chr1:66790016-66790035 None:intergenic 30.0%
ATTCATTGAACAGAAGTTCA+TGG - Chr1:66789801-66789820 MsG0180003696.01.T01:intron 30.0%
CAACAAGGAAACCAAAAAAA+AGG + Chr1:66793187-66793206 None:intergenic 30.0%
CTACGTCTATTTAAGTCAAA+CGG + Chr1:66790534-66790553 None:intergenic 30.0%
CTAGTGATGTAAATCAAGTA+GGG - Chr1:66793884-66793903 MsG0180003696.01.T01:intron 30.0%
GTATCAAATGAAAACACTGT+TGG - Chr1:66791221-66791240 MsG0180003696.01.T01:CDS 30.0%
GTATTCATCTTCAGATTTGA+AGG - Chr1:66789759-66789778 MsG0180003696.01.T01:intron 30.0%
GTGGAAATCTTCTAAACAAT+CGG - Chr1:66789450-66789469 MsG0180003696.01.T01:intron 30.0%
GTGTTGAACTCAATATCTAA+TGG - Chr1:66791591-66791610 MsG0180003696.01.T01:CDS 30.0%
GTTGTCCTAAAACCTAATAT+GGG - Chr1:66790171-66790190 MsG0180003696.01.T01:intron 30.0%
TATGGACATCCTATATATGA+AGG - Chr1:66792441-66792460 MsG0180003696.01.T01:CDS 30.0%
TGGAAATCTTCTAAACAATC+GGG - Chr1:66789451-66789470 MsG0180003696.01.T01:intron 30.0%
TGTATATACTAAGACCTCAA+AGG + Chr1:66792779-66792798 None:intergenic 30.0%
TGTTGTCCTAAAACCTAATA+TGG - Chr1:66790170-66790189 MsG0180003696.01.T01:intron 30.0%
TGTTTCGTTTAACAGTTGAT+TGG - Chr1:66793120-66793139 MsG0180003696.01.T01:intron 30.0%
TTCTCAACGATCAATTATTC+TGG - Chr1:66791966-66791985 MsG0180003696.01.T01:CDS 30.0%
TTCTGCTAAAATACTTCAAG+CGG - Chr1:66789911-66789930 MsG0180003696.01.T01:intron 30.0%
! AATTCTAGAAGCACAATATC+TGG - Chr1:66791011-66791030 MsG0180003696.01.T01:intron 30.0%
! ACAACACTTTTATCTCTAAG+GGG + Chr1:66791182-66791201 None:intergenic 30.0%
! ACATTTTGTGAAGTTATCAG+AGG - Chr1:66791931-66791950 MsG0180003696.01.T01:CDS 30.0%
! ATTTCAATTTGAGGTCAGAT+AGG - Chr1:66790037-66790056 MsG0180003696.01.T01:intron 30.0%
! CATGTATTAGTAGTTTGTCA+AGG - Chr1:66790835-66790854 MsG0180003696.01.T01:intron 30.0%
! CATTTTTGATCCAAAAGGTT+TGG + Chr1:66793632-66793651 None:intergenic 30.0%
! CTAGAGTATCCTTTAAATCT+AGG + Chr1:66790444-66790463 None:intergenic 30.0%
! CTTTTATCTGATCATCATAC+AGG - Chr1:66791751-66791770 MsG0180003696.01.T01:CDS 30.0%
! TAATTGGCTTATGTGATATG+AGG + Chr1:66791475-66791494 None:intergenic 30.0%
! TTTCAATTTGAGGTCAGATA+GGG - Chr1:66790038-66790057 MsG0180003696.01.T01:intron 30.0%
!! GTATCTTCTGAAATGTTAGA+AGG - Chr1:66793322-66793341 MsG0180003696.01.T01:CDS 30.0%
!! TCATCTTGTTCTGAATGTTT+TGG - Chr1:66792212-66792231 MsG0180003696.01.T01:CDS 30.0%
!! TGCTTTTTAAACAAAGAGTC+TGG + Chr1:66789937-66789956 None:intergenic 30.0%
!!! CTCTGAAATTTTCCCATATT+AGG + Chr1:66790186-66790205 None:intergenic 30.0%
!!! TGATGTTTGTGCCTTTTTTT+TGG - Chr1:66793173-66793192 MsG0180003696.01.T01:intron 30.0%
!!! TTTTTTTAACTTTTCTGCGG+TGG - Chr1:66788869-66788888 MsG0180003696.01.T01:CDS 30.0%
AAATCTTCTAAACAATCGGG+TGG - Chr1:66789454-66789473 MsG0180003696.01.T01:intron 35.0%
AAGAATGTGGCAAGCTAAAA+AGG + Chr1:66792538-66792557 None:intergenic 35.0%
AAGAGTCTTGATCATAGACA+TGG - Chr1:66790984-66791003 MsG0180003696.01.T01:intron 35.0%
AAGCAGACAAAAGACAAGAA+AGG + Chr1:66791703-66791722 None:intergenic 35.0%
AAGGGATCAGGAAGAATTTA+AGG - Chr1:66789693-66789712 MsG0180003696.01.T01:intron 35.0%
ACAACAATCTTTGACGATCT+AGG + Chr1:66790156-66790175 None:intergenic 35.0%
ACCTATTGATGTCTATGGTA+TGG + Chr1:66792392-66792411 None:intergenic 35.0%
ACTTAAATAGACGTAGCAGA+CGG - Chr1:66790538-66790557 MsG0180003696.01.T01:intron 35.0%
AGAAAATTATGCGGAGAACA+AGG + Chr1:66790231-66790250 None:intergenic 35.0%
AGAGGAAATAACAGCAACTT+TGG - Chr1:66790503-66790522 MsG0180003696.01.T01:intron 35.0%
AGCAACAAATTCATTTGTGC+TGG + Chr1:66793030-66793049 None:intergenic 35.0%
ATCAATCTAGCTATAACACC+TGG + Chr1:66789544-66789563 None:intergenic 35.0%
ATTGAATTGCAGCATCTTTG+TGG - Chr1:66788694-66788713 MsG0180003696.01.T01:CDS 35.0%
CAAAGAAGAGATTATCAGAG+AGG - Chr1:66790598-66790617 MsG0180003696.01.T01:intron 35.0%
CCTACTTGATTTACATCACT+AGG + Chr1:66793886-66793905 None:intergenic 35.0%
CCTAGTGATGTAAATCAAGT+AGG - Chr1:66793883-66793902 MsG0180003696.01.T01:intron 35.0%
CGAAGAAAATTCAATGCAAG+AGG - Chr1:66791325-66791344 MsG0180003696.01.T01:CDS 35.0%
GACAGATCATCTGTAAAAGA+AGG + Chr1:66792194-66792213 None:intergenic 35.0%
GAGGAAATAACAGCAACTTT+GGG - Chr1:66790504-66790523 MsG0180003696.01.T01:intron 35.0%
GATTTAGTGGCAGAAATAGT+CGG - Chr1:66793811-66793830 MsG0180003696.01.T01:intron 35.0%
GGAAATTATGAGAAAACACG+TGG + Chr1:66792371-66792390 None:intergenic 35.0%
GGAATCTAGAGAAATTGCAA+AGG - Chr1:66790362-66790381 MsG0180003696.01.T01:CDS 35.0%
GTATCCTTTAAATCTAGGAG+AGG + Chr1:66790439-66790458 None:intergenic 35.0%
TAGTCACCTATTGATGTCTA+TGG + Chr1:66792397-66792416 None:intergenic 35.0%
TCAAAGTTCTCCATATTGGT+TGG + Chr1:66790012-66790031 None:intergenic 35.0%
TCAACACCAGATCATAGATT+TGG + Chr1:66791578-66791597 None:intergenic 35.0%
TCAATCTAGCTATAACACCT+GGG + Chr1:66789543-66789562 None:intergenic 35.0%
TCAATCTCTTAATGCCTTTG+AGG - Chr1:66792762-66792781 MsG0180003696.01.T01:CDS 35.0%
TCATCTTCAGATTTGAAGGA+CGG - Chr1:66789763-66789782 MsG0180003696.01.T01:intron 35.0%
TCATGTAGAACCAACCAATA+TGG - Chr1:66789999-66790018 MsG0180003696.01.T01:intron 35.0%
TCCATACCATAGACATCAAT+AGG - Chr1:66792388-66792407 MsG0180003696.01.T01:CDS 35.0%
TCTTCCTCTCCTAGATTTAA+AGG - Chr1:66790432-66790451 MsG0180003696.01.T01:intron 35.0%
TGACAATTCCTGAATTGATG+CGG + Chr1:66793561-66793580 None:intergenic 35.0%
TGTAGACCTCACCTTATATT+TGG - Chr1:66792307-66792326 MsG0180003696.01.T01:CDS 35.0%
TGTTCTGGCAGAAAATTATG+CGG + Chr1:66790240-66790259 None:intergenic 35.0%
TGTTTGAAGATCTGGAAGAT+AGG - Chr1:66793485-66793504 MsG0180003696.01.T01:intron 35.0%
TTAGAGAAAAATCGAAGCAG+AGG - Chr1:66789634-66789653 MsG0180003696.01.T01:intron 35.0%
TTATCCGAAGAAGATTCAGA+AGG + Chr1:66791248-66791267 None:intergenic 35.0%
TTCAATTTGCATGGTAGTCA+TGG - Chr1:66792575-66792594 MsG0180003696.01.T01:CDS 35.0%
TTCTGAATCTTCTTCGGATA+AGG - Chr1:66791247-66791266 MsG0180003696.01.T01:CDS 35.0%
TTGTTAAGATATACACCCTC+CGG + Chr1:66792937-66792956 None:intergenic 35.0%
TTTGGCAATTTCATAGCTAG+AGG + Chr1:66791560-66791579 None:intergenic 35.0%
! AATGATAAGTTTGCTCGCAA+CGG - Chr1:66790753-66790772 MsG0180003696.01.T01:intron 35.0%
! AGGTGTTATAGCTAGATTGA+TGG - Chr1:66789543-66789562 MsG0180003696.01.T01:intron 35.0%
! ATCTAGAAATTTTGTACCCC+CGG - Chr1:66793835-66793854 MsG0180003696.01.T01:intron 35.0%
! CATAATTTTCTGCCAGAACA+TGG - Chr1:66790240-66790259 MsG0180003696.01.T01:CDS 35.0%
! CTGCTTCGATTTTTCTCTAA+AGG + Chr1:66789634-66789653 None:intergenic 35.0%
! GGTGTTATAGCTAGATTGAT+GGG - Chr1:66789544-66789563 MsG0180003696.01.T01:intron 35.0%
! GTCTTTTAGGCACAATTCTT+TGG - Chr1:66790341-66790360 MsG0180003696.01.T01:CDS 35.0%
! GTGATTTGACAACTTGTTCA+AGG - Chr1:66793512-66793531 MsG0180003696.01.T01:intron 35.0%
! TGTTTCTGTGTTTGAAGATC+TGG - Chr1:66793477-66793496 MsG0180003696.01.T01:intron 35.0%
!! AAAGTTGCTGTTATTTCCTC+TGG + Chr1:66790504-66790523 None:intergenic 35.0%
ACAGATGATTCACTAGAACG+CGG + Chr1:66790567-66790586 None:intergenic 40.0%
AGAAGAGATTATCAGAGAGG+TGG - Chr1:66790601-66790620 MsG0180003696.01.T01:intron 40.0%
AGAAGATTCACCCAATCTTG+AGG - Chr1:66791133-66791152 MsG0180003696.01.T01:CDS 40.0%
AGAGTTCCATGATACACTTG+AGG - Chr1:66789867-66789886 MsG0180003696.01.T01:intron 40.0%
AGCTGAAACTGAAGTTACAG+AGG + Chr1:66788545-66788564 None:intergenic 40.0%
ATAGTTCAAGCAGTGCTTCT+GGG - Chr1:66790469-66790488 MsG0180003696.01.T01:intron 40.0%
ATATTTCAGGACGTATCAGC+TGG - Chr1:66792065-66792084 MsG0180003696.01.T01:CDS 40.0%
ATCAAGAACTGAGATTGGAC+TGG + Chr1:66792171-66792190 None:intergenic 40.0%
ATGGAGAACTGAAGATAGCT+GGG - Chr1:66793354-66793373 MsG0180003696.01.T01:intron 40.0%
ATTATCAGAGAGGTGGAAGA+TGG - Chr1:66790608-66790627 MsG0180003696.01.T01:intron 40.0%
CAAACACAGAAACACTCACA+GGG + Chr1:66793471-66793490 None:intergenic 40.0%
CAAGGTTGCAGAGAAAGATT+CGG - Chr1:66789225-66789244 MsG0180003696.01.T01:intron 40.0%
CAATCTAGCTATAACACCTG+GGG + Chr1:66789542-66789561 None:intergenic 40.0%
CATCACTAGGAAACATCCTA+AGG + Chr1:66793873-66793892 None:intergenic 40.0%
CTAGAATCAGGAGAGAAATC+CGG + Chr1:66789193-66789212 None:intergenic 40.0%
GAAAAATCGAAGCAGAGGAA+CGG - Chr1:66789639-66789658 MsG0180003696.01.T01:intron 40.0%
GAAAATCTTGATACGTCGCT+AGG + Chr1:66789837-66789856 None:intergenic 40.0%
GAAGGATCAAGAACTGAGAT+TGG + Chr1:66792176-66792195 None:intergenic 40.0%
GCTGAAACTGAAGTTACAGA+GGG + Chr1:66788544-66788563 None:intergenic 40.0%
GGGTGAATCTTCTTCAAGAT+TGG + Chr1:66791126-66791145 None:intergenic 40.0%
GTCTTAGTATATACACCCTC+CGG - Chr1:66792784-66792803 MsG0180003696.01.T01:CDS 40.0%
TAAATTTGCCTGACAGTGCA+AGG - Chr1:66790319-66790338 MsG0180003696.01.T01:CDS 40.0%
TAAGGTTCTTCCTGGATCAT+CGG - Chr1:66791265-66791284 MsG0180003696.01.T01:CDS 40.0%
TACCAGTTTCCTTACCTTGT+AGG + Chr1:66792253-66792272 None:intergenic 40.0%
TACCCTTCATTCTCTTACCA+GGG + Chr1:66790698-66790717 None:intergenic 40.0%
TATCTGGTCACAAGAAGTCT+TGG - Chr1:66791027-66791046 MsG0180003696.01.T01:intron 40.0%
TATGGAGAACTGAAGATAGC+TGG - Chr1:66793353-66793372 MsG0180003696.01.T01:intron 40.0%
TCAAACACAGAAACACTCAC+AGG + Chr1:66793472-66793491 None:intergenic 40.0%
TCAAGAACTGAGATTGGACT+GGG + Chr1:66792170-66792189 None:intergenic 40.0%
TCAGCATGATTTCCATGTTC+TGG + Chr1:66790255-66790274 None:intergenic 40.0%
TCATAAACAGCAACAGCATC+CGG - Chr1:66789171-66789190 MsG0180003696.01.T01:CDS 40.0%
TCGTCACTTGAAACTAGCAT+AGG + Chr1:66793289-66793308 None:intergenic 40.0%
TGAATCATCTGTGAGTAGAG+AGG - Chr1:66790575-66790594 MsG0180003696.01.T01:intron 40.0%
TGATCAGCATCTTTACAGCA+TGG + Chr1:66792146-66792165 None:intergenic 40.0%
TGCTTATATTTGTGACCGGA+GGG - Chr1:66792919-66792938 MsG0180003696.01.T01:CDS 40.0%
TGCTTATATTTGTGACCGGA+GGG + Chr1:66792938-66792919 None:intergenic 40.0%
TTCCCTGGTAAGAGAATGAA+GGG - Chr1:66790693-66790712 MsG0180003696.01.T01:intron 40.0%
TTGCTTATATTTGTGACCGG+AGG - Chr1:66792918-66792937 MsG0180003696.01.T01:CDS 40.0%
TTGCTTATATTTGTGACCGG+AGG + Chr1:66792937-66792918 None:intergenic 40.0%
! AGAAATGCAGCCAAACCTTT+TGG - Chr1:66793619-66793638 MsG0180003696.01.T01:intron 40.0%
! ATAGCAAGGGTGTGTTTCAT+GGG - Chr1:66792698-66792717 MsG0180003696.01.T01:CDS 40.0%
! ATGGTCTTTTCCAGATGCTA+GGG - Chr1:66793668-66793687 MsG0180003696.01.T01:intron 40.0%
! CAACTTGTTCAAGGTCTGAA+AGG - Chr1:66793521-66793540 MsG0180003696.01.T01:intron 40.0%
! CTAGTTTCAAGTGACGAAGA+TGG - Chr1:66793292-66793311 MsG0180003696.01.T01:CDS 40.0%
! GAAAGGTTTGAAGCAGAAGA+TGG + Chr1:66793064-66793083 None:intergenic 40.0%
! TAACTTTTCTGCGGTGGTAT+CGG - Chr1:66788875-66788894 MsG0180003696.01.T01:CDS 40.0%
! TCTAGAAATTTTGTACCCCC+GGG - Chr1:66793836-66793855 MsG0180003696.01.T01:intron 40.0%
! TGATCGATATATGGTGCCAA+AGG - Chr1:66790932-66790951 MsG0180003696.01.T01:intron 40.0%
! TGTCGCCTTTTACTAAGACA+CGG + Chr1:66791292-66791311 None:intergenic 40.0%
! TTGTTATTAGGCTGCTGAGA+TGG + Chr1:66789583-66789602 None:intergenic 40.0%
! TTTATCTCTAAGGGGCTCAA+AGG + Chr1:66791174-66791193 None:intergenic 40.0%
!! ATGATTAACGGGCTTCAAGA+TGG - Chr1:66793649-66793668 MsG0180003696.01.T01:intron 40.0%
!! ATTGGTTGGTTCTACATGAC+CGG + Chr1:66789998-66790017 None:intergenic 40.0%
!! TCCTTGTGCTGCTTGTTATT+AGG + Chr1:66789595-66789614 None:intergenic 40.0%
!! TCTCCTGATTCTAGTTTCTC+CGG - Chr1:66789199-66789218 MsG0180003696.01.T01:CDS 40.0%
AAAGGTAGAGGATGATGTCC+TGG - Chr1:66793699-66793718 MsG0180003696.01.T01:intron 45.0%
AAGGTAGAGGATGATGTCCT+GGG - Chr1:66793700-66793719 MsG0180003696.01.T01:intron 45.0%
ACCCCTTTCCAATCACATTC+CGG - Chr1:66789976-66789995 MsG0180003696.01.T01:intron 45.0%
ACCGGAATGTGATTGGAAAG+GGG + Chr1:66789980-66789999 None:intergenic 45.0%
ACCTACCACTCTCTACCTTT+GGG + Chr1:66789741-66789760 None:intergenic 45.0%
ACCTTGAGGAAGATGAAGCT+TGG + Chr1:66788509-66788528 None:intergenic 45.0%
AGGAAGATGAAGCTTGGAGT+TGG + Chr1:66788503-66788522 None:intergenic 45.0%
AGTGGTTCAACCAACTCAGA+AGG + Chr1:66790783-66790802 None:intergenic 45.0%
CAACAGGGGTGAATTACAAC+AGG - Chr1:66790064-66790083 MsG0180003696.01.T01:intron 45.0%
CAGATTCCAACTTCAGCAAC+TGG + Chr1:66793249-66793268 None:intergenic 45.0%
CATCATCCTCTACCTTTCCT+TGG + Chr1:66793696-66793715 None:intergenic 45.0%
CATGAAACACACCCTTGCTA+TGG + Chr1:66792699-66792718 None:intergenic 45.0%
CCAAAGACAGTAGATGAAGC+AGG + Chr1:66790873-66790892 None:intergenic 45.0%
CCTAAGGACAACTATTCTCC+CGG + Chr1:66793857-66793876 None:intergenic 45.0%
CCTGCTTCATCTACTGTCTT+TGG - Chr1:66790870-66790889 MsG0180003696.01.T01:intron 45.0%
CTAAAAGACCTTGCACTGTC+AGG + Chr1:66790330-66790349 None:intergenic 45.0%
CTAAGGACAACTATTCTCCC+GGG + Chr1:66793856-66793875 None:intergenic 45.0%
CTACATGACCGGAATGTGAT+TGG + Chr1:66789987-66790006 None:intergenic 45.0%
CTTCTCTTGGATTCAGTTGC+TGG + Chr1:66789517-66789536 None:intergenic 45.0%
GAATCTGAAGACCATGTGGA+GGG - Chr1:66793262-66793281 MsG0180003696.01.T01:CDS 45.0%
GACCGGAATGTGATTGGAAA+GGG + Chr1:66789981-66790000 None:intergenic 45.0%
GACCTACAAGGTAAGGAAAC+TGG - Chr1:66792248-66792267 MsG0180003696.01.T01:CDS 45.0%
GATAGTTCAAGCAGTGCTTC+TGG - Chr1:66790468-66790487 MsG0180003696.01.T01:intron 45.0%
GCCTAATAACAAGCAGCACA+AGG - Chr1:66789591-66789610 MsG0180003696.01.T01:intron 45.0%
GTACCCTTCATTCTCTTACC+AGG + Chr1:66790699-66790718 None:intergenic 45.0%
GTTCCCTGGTAAGAGAATGA+AGG - Chr1:66790692-66790711 MsG0180003696.01.T01:intron 45.0%
GTTGGAATCTGAAGACCATG+TGG - Chr1:66793258-66793277 MsG0180003696.01.T01:CDS 45.0%
TAAGGACAACTATTCTCCCG+GGG + Chr1:66793855-66793874 None:intergenic 45.0%
TACCTACCACTCTCTACCTT+TGG + Chr1:66789742-66789761 None:intergenic 45.0%
TCAGCACGCAAGAATGTTCT+AGG + Chr1:66790900-66790919 None:intergenic 45.0%
TCCAAGCTTCATCTTCCTCA+AGG - Chr1:66788505-66788524 MsG0180003696.01.T01:three_prime_UTR 45.0%
TCTTCGGATAAGGTTCTTCC+TGG - Chr1:66791257-66791276 MsG0180003696.01.T01:CDS 45.0%
TGACCGGAATGTGATTGGAA+AGG + Chr1:66789982-66790001 None:intergenic 45.0%
TGGGCCTTCTGAATCTTCTT+CGG - Chr1:66791241-66791260 MsG0180003696.01.T01:CDS 45.0%
TTCACCCAATCTTGAGGTTC+AGG - Chr1:66791139-66791158 MsG0180003696.01.T01:CDS 45.0%
TTGCGCAAAACGTGTAGTGA+AGG + Chr1:66791676-66791695 None:intergenic 45.0%
! AAGCATCGCGATGGTTATCA+TGG - Chr1:66790096-66790115 MsG0180003696.01.T01:intron 45.0%
! AGTTGCTGATTGAGGAGTCT+CGG - Chr1:66793725-66793744 MsG0180003696.01.T01:intron 45.0%
! CATAGCAAGGGTGTGTTTCA+TGG - Chr1:66792697-66792716 MsG0180003696.01.T01:CDS 45.0%
! CTGACAGTGCAAGGTCTTTT+AGG - Chr1:66790328-66790347 MsG0180003696.01.T01:CDS 45.0%
! CTTTTCGACCGCATCAATTC+AGG - Chr1:66793550-66793569 MsG0180003696.01.T01:intron 45.0%
! GATGGTCTTTTCCAGATGCT+AGG - Chr1:66793667-66793686 MsG0180003696.01.T01:intron 45.0%
! GCTAGATTGATGGGTCTTGA+CGG - Chr1:66789553-66789572 MsG0180003696.01.T01:intron 45.0%
! GTCGCCTTTTACTAAGACAC+GGG + Chr1:66791291-66791310 None:intergenic 45.0%
! TCGCACGTCTTTTGTCGAAT+TGG + Chr1:66790122-66790141 None:intergenic 45.0%
! TGGTGCCAAAGGACCTTAAA+CGG - Chr1:66790943-66790962 MsG0180003696.01.T01:intron 45.0%
! TTCTGGGAATGAATCTCCAG+AGG - Chr1:66790485-66790504 MsG0180003696.01.T01:intron 45.0%
!! TCTGAGTTGGTTGAACCACT+GGG - Chr1:66790783-66790802 MsG0180003696.01.T01:intron 45.0%
!! TTCTGAGTTGGTTGAACCAC+TGG - Chr1:66790782-66790801 MsG0180003696.01.T01:intron 45.0%
!! TTTCATCAGAAGCATCGCGA+TGG - Chr1:66790087-66790106 MsG0180003696.01.T01:intron 45.0%
!! AATTAAATTAAAAAAGTAAA+AGG + Chr1:66788632-66788651 None:intergenic 5.0%
AACACCTGGGGATCTTCTCT+TGG + Chr1:66789530-66789549 None:intergenic 50.0%
AAGGACAACTATTCTCCCGG+GGG + Chr1:66793854-66793873 None:intergenic 50.0%
AATCTACTGACCCACAGCCA+TGG - Chr1:66793593-66793612 MsG0180003696.01.T01:intron 50.0%
AGCAGAGGAACGGCAAATGA+CGG - Chr1:66789649-66789668 MsG0180003696.01.T01:intron 50.0%
AGGAGCCTGAACCTCAAGAT+TGG + Chr1:66791147-66791166 None:intergenic 50.0%
AGGGAACCAAGGAAAGGTAG+AGG - Chr1:66793687-66793706 MsG0180003696.01.T01:intron 50.0%
AGGTCAGATAGGGAGTCAAC+AGG - Chr1:66790048-66790067 MsG0180003696.01.T01:intron 50.0%
ATCGTCTAGGAGGAGCTCAA+GGG - Chr1:66789675-66789694 MsG0180003696.01.T01:intron 50.0%
ATCTACTGACCCACAGCCAT+GGG - Chr1:66793594-66793613 MsG0180003696.01.T01:intron 50.0%
CAAAGGACCTTAAACGGGAG+AGG - Chr1:66790949-66790968 MsG0180003696.01.T01:intron 50.0%
CAGCATGGAGATTCATGTCC+AGG + Chr1:66792131-66792150 None:intergenic 50.0%
CATTTCTCACCCATGGCTGT+GGG + Chr1:66793606-66793625 None:intergenic 50.0%
CCAACGCCTCAAGTGTATCA+TGG + Chr1:66789876-66789895 None:intergenic 50.0%
CCACCGGAGAAACTAGAATC+AGG + Chr1:66789205-66789224 None:intergenic 50.0%
CCATGATACACTTGAGGCGT+TGG - Chr1:66789873-66789892 MsG0180003696.01.T01:intron 50.0%
CCGGGAGAATAGTTGTCCTT+AGG - Chr1:66793854-66793873 MsG0180003696.01.T01:intron 50.0%
CTAAGGGGCTCAAAGGTTTC+AGG + Chr1:66791167-66791186 None:intergenic 50.0%
CTCTTCTCCTCTCCCGTTTA+AGG + Chr1:66790959-66790978 None:intergenic 50.0%
GAATCCAAGAGAAGATCCCC+AGG - Chr1:66789523-66789542 MsG0180003696.01.T01:intron 50.0%
GAGATCCCAAAGGTAGAGAG+TGG - Chr1:66789733-66789752 MsG0180003696.01.T01:intron 50.0%
GATGCTAGGGAACCAAGGAA+AGG - Chr1:66793681-66793700 MsG0180003696.01.T01:intron 50.0%
GATGGCACACAAGTCTCAAG+AGG - Chr1:66790626-66790645 MsG0180003696.01.T01:intron 50.0%
GCAACTCCAGTTGCTGAAGT+TGG - Chr1:66793240-66793259 MsG0180003696.01.T01:CDS 50.0%
GGAATCTGAAGACCATGTGG+AGG - Chr1:66793261-66793280 MsG0180003696.01.T01:CDS 50.0%
GGAGAAAGAGAGTGACCTTG+AGG + Chr1:66788523-66788542 None:intergenic 50.0%
GGAGATTCATGTCCAGGTAC+AGG + Chr1:66792125-66792144 None:intergenic 50.0%
GGAGCCTGAACCTCAAGATT+GGG + Chr1:66791146-66791165 None:intergenic 50.0%
GGTCAGATAGGGAGTCAACA+GGG - Chr1:66790049-66790068 MsG0180003696.01.T01:intron 50.0%
GGTGCCAAAGGACCTTAAAC+GGG - Chr1:66790944-66790963 MsG0180003696.01.T01:intron 50.0%
GTATCAGCAGCAAGGATGGT+TGG - Chr1:66790805-66790824 MsG0180003696.01.T01:intron 50.0%
GTCAGATAGGGAGTCAACAG+GGG - Chr1:66790050-66790069 MsG0180003696.01.T01:intron 50.0%
GTCTGTGCATTCACTGAAGC+AGG - Chr1:66791049-66791068 MsG0180003696.01.T01:intron 50.0%
TCATTGAAACCTTCCCCGCT+AGG + Chr1:66790738-66790757 None:intergenic 50.0%
TCCCAAAGGTAGAGAGTGGT+AGG - Chr1:66789737-66789756 MsG0180003696.01.T01:intron 50.0%
TCGGCCCGTGTCTTAGTAAA+AGG - Chr1:66791284-66791303 MsG0180003696.01.T01:CDS 50.0%
TGAGGTCTCAGAGATCCCAA+AGG - Chr1:66789723-66789742 MsG0180003696.01.T01:intron 50.0%
TTCAAGTGACGAAGATGGCG+TGG - Chr1:66793297-66793316 MsG0180003696.01.T01:CDS 50.0%
TTCCAGATGCTAGGGAACCA+AGG - Chr1:66793676-66793695 MsG0180003696.01.T01:intron 50.0%
TTCCTTGGTTCCCTAGCATC+TGG + Chr1:66793681-66793700 None:intergenic 50.0%
TTGAGCTCCTCCTAGACGAT+CGG + Chr1:66789675-66789694 None:intergenic 50.0%
TTGATACGTCGCTAGGCGTT+TGG + Chr1:66789830-66789849 None:intergenic 50.0%
TTGGCTGCATTTCTCACCCA+TGG + Chr1:66793613-66793632 None:intergenic 50.0%
TTTCTCTGCAACCTTGCCAC+CGG + Chr1:66789221-66789240 None:intergenic 50.0%
! CACAAGTCTCAAGAGGTGCA+AGG - Chr1:66790633-66790652 MsG0180003696.01.T01:intron 50.0%
! CTCTCCCGTTTAAGGTCCTT+TGG + Chr1:66790951-66790970 None:intergenic 50.0%
!! AGTGTCAGTGCTGACCTACA+AGG - Chr1:66792236-66792255 MsG0180003696.01.T01:CDS 50.0%
!! CAGTGCTGACCTACAAGGTA+AGG - Chr1:66792241-66792260 MsG0180003696.01.T01:CDS 50.0%
!! CCTGATTCTAGTTTCTCCGG+TGG - Chr1:66789202-66789221 MsG0180003696.01.T01:CDS 50.0%
!! GACGTATCAGCTGGTTCTAC+TGG - Chr1:66792074-66792093 MsG0180003696.01.T01:CDS 50.0%
!! GATGAAGCTTGGAGTTGGTG+CGG + Chr1:66788498-66788517 None:intergenic 50.0%
!! GTATCAGCTGGTTCTACTGG+TGG - Chr1:66792077-66792096 MsG0180003696.01.T01:CDS 50.0%
!! TGAGGCGTTGGACTCTAACA+AGG - Chr1:66789885-66789904 MsG0180003696.01.T01:intron 50.0%
!! TTCTAGTTTCTCCGGTGGCA+AGG - Chr1:66789207-66789226 MsG0180003696.01.T01:CDS 50.0%
ACCACTGGGTATCAGCAGCA+AGG - Chr1:66790797-66790816 MsG0180003696.01.T01:intron 55.0%
CAAATGACGGCCGATCGTCT+AGG - Chr1:66789662-66789681 MsG0180003696.01.T01:intron 55.0%
CAACGGCGAACCTTCTGAGT+TGG - Chr1:66790770-66790789 MsG0180003696.01.T01:intron 55.0%
CAGCAGCAAGGATGGTTGGA+GGG - Chr1:66790809-66790828 MsG0180003696.01.T01:intron 55.0%
CAGGTACAGGTGCTTCAGAG+AGG + Chr1:66792112-66792131 None:intergenic 55.0%
CCTCAATCAGCAACTTGCCC+AGG + Chr1:66793720-66793739 None:intergenic 55.0%
CTAGCATAGGTCCCTCCACA+TGG + Chr1:66793276-66793295 None:intergenic 55.0%
CTGGGTATCAGCAGCAAGGA+TGG - Chr1:66790801-66790820 MsG0180003696.01.T01:intron 55.0%
GATCGTCTAGGAGGAGCTCA+AGG - Chr1:66789674-66789693 MsG0180003696.01.T01:intron 55.0%
GCATTTCTCACCCATGGCTG+TGG + Chr1:66793607-66793626 None:intergenic 55.0%
GCTGATATGCTAGCGTTCCC+TGG - Chr1:66790678-66790697 MsG0180003696.01.T01:intron 55.0%
TAGGAGGAGCTCAAGGGATC+AGG - Chr1:66789681-66789700 MsG0180003696.01.T01:intron 55.0%
TCAGCAGCAAGGATGGTTGG+AGG - Chr1:66790808-66790827 MsG0180003696.01.T01:intron 55.0%
TCCTTGCTGCTGATACCCAG+TGG + Chr1:66790801-66790820 None:intergenic 55.0%
! CCTGGGCAAGTTGCTGATTG+AGG - Chr1:66793717-66793736 MsG0180003696.01.T01:intron 55.0%
! TGCTGATTGAGGAGTCTCGG+TGG - Chr1:66793728-66793747 MsG0180003696.01.T01:intron 55.0%
! TTTTGACAGCCTGCCTAGCG+GGG - Chr1:66790722-66790741 MsG0180003696.01.T01:intron 55.0%
!! CGTTTTGACAGCCTGCCTAG+CGG - Chr1:66790720-66790739 MsG0180003696.01.T01:intron 55.0%
!! CTCTCTGAAGCACCTGTACC+TGG - Chr1:66792110-66792129 MsG0180003696.01.T01:CDS 55.0%
!! GTTTTGACAGCCTGCCTAGC+GGG - Chr1:66790721-66790740 MsG0180003696.01.T01:intron 55.0%
AAGACACGGGCCGATGATCC+AGG + Chr1:66791278-66791297 None:intergenic 60.0%
ATGACGGCCGATCGTCTAGG+AGG - Chr1:66789665-66789684 MsG0180003696.01.T01:intron 60.0%
CACCAGCAGGAGCAGCACAT+TGG - Chr1:66790656-66790675 MsG0180003696.01.T01:intron 60.0%
TGAAACCTTCCCCGCTAGGC+AGG + Chr1:66790734-66790753 None:intergenic 60.0%
! AAGAGGTGCAAGGCACCAGC+AGG - Chr1:66790643-66790662 MsG0180003696.01.T01:intron 60.0%
! AGCCAATGTGCTGCTCCTGC+TGG + Chr1:66790661-66790680 None:intergenic 60.0%
GACAGCCTGCCTAGCGGGGA+AGG - Chr1:66790726-66790745 MsG0180003696.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 66788475 66793992 66788475 ID=MsG0180003696.01;Name=MsG0180003696.01
Chr1 mRNA 66788475 66793992 66788475 ID=MsG0180003696.01.T01;Parent=MsG0180003696.01;Name=MsG0180003696.01.T01;_AED=0.28;_eAED=0.29;_QI=0|0.5|0.4|1|0.75|0.6|5|152|965
Chr1 exon 66788475 66789237 66788475 ID=MsG0180003696.01.T01:exon:51483;Parent=MsG0180003696.01.T01
Chr1 exon 66790210 66790393 66790210 ID=MsG0180003696.01.T01:exon:51482;Parent=MsG0180003696.01.T01
Chr1 exon 66791121 66793034 66791121 ID=MsG0180003696.01.T01:exon:51481;Parent=MsG0180003696.01.T01
Chr1 exon 66793221 66793357 66793221 ID=MsG0180003696.01.T01:exon:51480;Parent=MsG0180003696.01.T01
Chr1 exon 66793941 66793992 66793941 ID=MsG0180003696.01.T01:exon:51479;Parent=MsG0180003696.01.T01
Chr1 CDS 66793941 66793992 66793941 ID=MsG0180003696.01.T01:cds;Parent=MsG0180003696.01.T01
Chr1 CDS 66793221 66793357 66793221 ID=MsG0180003696.01.T01:cds;Parent=MsG0180003696.01.T01
Chr1 CDS 66791121 66793034 66791121 ID=MsG0180003696.01.T01:cds;Parent=MsG0180003696.01.T01
Chr1 CDS 66790210 66790393 66790210 ID=MsG0180003696.01.T01:cds;Parent=MsG0180003696.01.T01
Chr1 CDS 66788627 66789237 66788627 ID=MsG0180003696.01.T01:cds;Parent=MsG0180003696.01.T01
Chr1 three_prime_UTR 66788475 66788626 66788475 ID=MsG0180003696.01.T01:three_prime_utr;Parent=MsG0180003696.01.T01
Gene Sequence

>MsG0180003696.01.T01

ATGGACAAAATCAAATCTCACCGCACCAACTCCAAGCTTCATCTTCCTCAAGTATCTGTTTGTGATTATTATTCTTTGTTGTTGTTTAATTTATTTTCAGGGAAAGAGCAGATTCATAAACAGCAACAGCATCCGGATTTCTCTCCTGATTCTAGTTTCTCCGGTGGCAAGGTTGCAGAGAAAGATTCGTTCTCATTTAAATTTGGGTGGAAATCTTCTAAACAATCGGGTGGAACTCCAATTAAGAAGTTATTAGCTGAAGAGATGTCACCAGCAACTGAATCCAAGAGAAGATCCCCAGGTGTTATAGCTAGATTGATGGGTCTTGACGGTCTTCCATCTCAGCAGCCTAATAACAAGCAGCACAAGGATCTACAGAAATCAACACCTTTAGAGAAAAATCGAAGCAGAGGAACGGCAAATGACGGCCGATCGTCTAGGAGGAGCTCAAGGGATCAGGAAGAATTTAAGGATGTATTTGAGGTCTCAGAGATCCCAAAGGTAGAGAGTGGTAGGTATTCATCTTCAGATTTGAAGGACGGTGAAGATGAAATGTCATTCATTGAACAGAAGTTCATGGATGCCAAACGCCTAGCGACGTATCAAGATTTTCAGTCTTCACAAGAGTTCCATGATACACTTGAGGCGTTGGACTCTAACAAGGATCTTCTGCTAAAATACTTCAAGCGGCCAGACTCTTTGTTTAAAAAGCATTTGAATGATCTGCAAGCTACCCCTTTCCAATCACATTCCGGTCATGTAGAACCAACCAATATGGAGAACTTTGAACATGATTTCAATTTGAGGTCAGATAGGGAGTCAACAGGGGTGAATTACAACAGGTTTCATCAGAAGCATCGCGATGGTTATCATGGCCAATTCGACAAAAGACGTGCGATGCATAATTCACCTAGATCGTCAAAGATTGTTGTCCTAAAACCTAATATGGGAAAATTTCAGAGTGGTACTAGAATTGAATCATCACCTTGTTCTCCGCATAATTTTCTGCCAGAACATGGAAATCATGCTGAATTTTCAGATGTCAGATTTAGAGATACTGAACTGTATCAAAAAATAAATTTGCCTGACAGTGCAAGGTCTTTTAGGCACAATTCTTTGGAATCTAGAGAAATTGCAAAGGAAGTAACTAGGCAAATGAAAAACAATCTGAGCAATGGTTGCATGATGTCTTCCTCTCCTAGATTTAAAGGATACTCTAGACATGATAGTTCAAGCAGTGCTTCTGGGAATGAATCTCCAGAGGAAATAACAGCAACTTTGGGTAAGCCGTTTGACTTAAATAGACGTAGCAGACGGTCACCGCGTTCTAGTGAATCATCTGTGAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAGATGGCACACAAGTCTCAAGAGGTGCAAGGCACCAGCAGGAGCAGCACATTGGCTGATATGCTAGCGTTCCCTGGTAAGAGAATGAAGGGTACACGTTTTGACAGCCTGCCTAGCGGGGAAGGTTTCAATGATAAGTTTGCTCGCAACGGCGAACCTTCTGAGTTGGTTGAACCACTGGGTATCAGCAGCAAGGATGGTTGGAGGGATGCATGTATTAGTAGTTTGTCAAGGTCAAGATCTCTTCCTGCTTCATCTACTGTCTTTGGAAGTCCTAGAACATTCTTGCGTGCTGAAGCACTTCGTAATGATCGATATATGGTGCCAAAGGACCTTAAACGGGAGAGGAGAAGAGCGACAAAGAGTCTTGATCATAGACATGGTATGAATTCTAGAAGCACAATATCTGGTCACAAGAAGTCTTGGTCTGTGCATTCACTGAAGCAGGAAGTTAATGAGTTCTCTCCCGACTTAAATGAAGTTCAAAATAACACGAAGACCAATCTTGAAGAAGATTCACCCAATCTTGAGGTTCAGGCTCCTGAAACCTTTGAGCCCCTTAGAGATAAAAGTGTTGTTTGTGATGATGTTGCAGATGTATCAAATGAAAACACTGTTGGGCCTTCTGAATCTTCTTCGGATAAGGTTCTTCCTGGATCATCGGCCCGTGTCTTAGTAAAAGGCGACAGTAGTGTTGTTGACGAAGAAAATTCAATGCAAGAGGACGTATCAGCTGGTTCTACTGGTGGATTTTCAGTCCTCTCTGAAGCACCTGTACCTGGACATGAATCTCCATGCTGTAAAGATGCTGATCAACCCAGTCCAATCTCAGTTCTTGATCCTTCTTTTACAGATGATCTGTCATCTTGTTCTGAATGTTTTGGAAGTGTCAGTGCTGACCTACAAGGGCTTCGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGAAGACCATGTGGAGGGACCTATGCTAGTTTCAAGTGACGAAGATGGCGTGGAAGTATCTTCTGAAATGTTAGAAGGAAATACATTATGGAGAACTGAAGATAGCTGGGAGTCTTCTTACATTATTGATGTTTTGTCTGAATCTGCTATTGCTGATGCTCAAACTGATAATAATTTGGAAGTTTGGCAATCTCTAGAATGCCCTGTGAGTGTTTCTGTGTTTGAAGATCTGGAAGATAGGTACAGTGATTTGACAACTTGTTCAAGGTCTGAAAGGAGATTGCTTTTCGACCGCATCAATTCAGGAATTGTCAAGATTCATGAGCAATCTACTGACCCACAGCCATGGGTGAGAAATGCAGCCAAACCTTTTGGATCAAAAATGATTAACGGGCTTCAAGATGGTCTTTTCCAGATGCTAGGGAACCAAGGAAAGGTAGAGGATGATGTCCTGGGCAAGTTGCTGATTGAGGAGTCTCGGTGGTTGAAGTTGAGAGATGACATTGATGTAATAGGTAGAGAAGTTGAGAGATTGATAGTAGATGATTTAGTGGCAGAAATAGTCGGTATCTAG
Protein sequence

>MsG0180003696.01.T01

MDKIKSHRTNSKLHLPQVSVCDYYSLLLFNLFSGKEQIHKQQQHPDFSPDSSFSGGKVAEKDSFSFKFGWKSSKQSGGTPIKKLLAEEMSPATESKRRSPGVIARLMGLDGLPSQQPNNKQHKDLQKSTPLEKNRSRGTANDGRSSRRSSRDQEEFKDVFEVSEIPKVESGRYSSSDLKDGEDEMSFIEQKFMDAKRLATYQDFQSSQEFHDTLEALDSNKDLLLKYFKRPDSLFKKHLNDLQATPFQSHSGHVEPTNMENFEHDFNLRSDRESTGVNYNRFHQKHRDGYHGQFDKRRAMHNSPRSSKIVVLKPNMGKFQSGTRIESSPCSPHNFLPEHGNHAEFSDVRFRDTELYQKINLPDSARSFRHNSLESREIAKEVTRQMKNNLSNGCMMSSSPRFKGYSRHDSSSSASGNESPEEITATLGKPFDLNRRSRRSPRSSESSVSREAKKRLSERWKMAHKSQEVQGTSRSSTLADMLAFPGKRMKGTRFDSLPSGEGFNDKFARNGEPSELVEPLGISSKDGWRDACISSLSRSRSLPASSTVFGSPRTFLRAEALRNDRYMVPKDLKRERRRATKSLDHRHGMNSRSTISGHKKSWSVHSLKQEVNEFSPDLNEVQNNTKTNLEEDSPNLEVQAPETFEPLRDKSVVCDDVADVSNENTVGPSESSSDKVLPGSSARVLVKGDSSVVDEENSMQEDVSAGSTGGFSVLSEAPVPGHESPCCKDADQPSPISVLDPSFTDDLSSCSECFGSVSADLQGLRMQLQLLKLESEDHVEGPMLVSSDEDGVEVSSEMLEGNTLWRTEDSWESSYIIDVLSESAIADAQTDNNLEVWQSLECPVSVSVFEDLEDRYSDLTTCSRSERRLLFDRINSGIVKIHEQSTDPQPWVRNAAKPFGSKMINGLQDGLFQMLGNQGKVEDDVLGKLLIEESRWLKLRDDIDVIGREVERLIVDDLVAEIVGI*