AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012471.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012471.01.T01 MTR_7g066730 98.649 222 0 1 1 219 525 746 2.57e-150 436
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012471.01.T01 AT3G09070 35.319 235 86 12 1 219 501 685 3.00e-12 65.9

Find 90 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAAGCTGCTTGGAGTATT+TGG 0.106015 3:-17050795 MsG0380012471.01.T01:CDS
CCAAGCAGCTTTCCATTTAC+TGG 0.185204 3:+17050804 None:intergenic
GGCGGAGGAGGAGGGATATT+TGG 0.254279 3:-17050508 MsG0380012471.01.T01:CDS
GAAAGCTGCTTGGAGTATTT+GGG 0.274489 3:-17050794 MsG0380012471.01.T01:CDS
ATGGGTGGAGGCGGAGGAGG+AGG 0.283550 3:-17050517 MsG0380012471.01.T01:CDS
CGAAGAAGAGTTCCAGTAAA+TGG 0.302023 3:-17050816 MsG0380012471.01.T01:CDS
AGTATTGGTGGTGGTGGTAA+TGG 0.344402 3:-17050604 MsG0380012471.01.T01:CDS
ATGGGAATGGGTGGAGGCGG+AGG 0.360541 3:-17050523 MsG0380012471.01.T01:CDS
AGTTTGTGTTGGAGAGGAAC+AGG 0.362327 3:-17050426 MsG0380012471.01.T01:CDS
GGAATGGGTGGAGGCGGAGG+AGG 0.362698 3:-17050520 MsG0380012471.01.T01:CDS
AGTTTAGAGGCGAGAGGAAT+GGG 0.374247 3:-17050654 MsG0380012471.01.T01:CDS
GAGATAATGGTTCTGTTGTC+GGG 0.384767 3:-17050873 MsG0380012471.01.T01:CDS
GGCACCGTTTCTCCGGCCAC+TGG 0.385742 3:+17050339 None:intergenic
CTGATTGGACCTTCCTTTCG+AGG 0.389614 3:+17050318 None:intergenic
CCTACCAACAGCATGGATAA+TGG 0.399873 3:-17050388 MsG0380012471.01.T01:CDS
GAGAGGAATGGGGATGTTAG+AGG 0.402867 3:-17050643 MsG0380012471.01.T01:CDS
AGTAGAGGTGGAAATGGTAA+TGG 0.408117 3:-17050709 MsG0380012471.01.T01:CDS
GTAGAGGTGGAAATGGTAAT+GGG 0.412732 3:-17050708 MsG0380012471.01.T01:CDS
AGCAATAGAATGAGCCTGAT+TGG 0.414209 3:+17050303 None:intergenic
GTTAGAGGTGGTGTTGGAAT+TGG 0.420754 3:-17050628 MsG0380012471.01.T01:CDS
AGAGATAATGGTTCTGTTGT+CGG 0.429136 3:-17050874 MsG0380012471.01.T01:CDS
ATAAAGAGGAGGAGGATGAT+AGG 0.432933 3:-17050738 MsG0380012471.01.T01:CDS
TATAGTAGTAGAGGTGGAAA+TGG 0.439820 3:-17050715 MsG0380012471.01.T01:CDS
GGTGTTGGAATTGGTAGTAT+TGG 0.442509 3:-17050619 MsG0380012471.01.T01:CDS
GAGTCGTGGCAGGAGTTTAG+AGG 0.443100 3:-17050667 MsG0380012471.01.T01:CDS
AATAGCAGTAATGGGTATCT+TGG 0.444044 3:-17050466 MsG0380012471.01.T01:CDS
TCTGTTGTCGGGAGTAATAA+TGG 0.455392 3:-17050862 MsG0380012471.01.T01:CDS
CTCGAAAGGAAGGTCCAATC+AGG 0.455417 3:-17050317 MsG0380012471.01.T01:CDS
AGTGATGTTAATAGCAGTAA+TGG 0.463161 3:-17050475 MsG0380012471.01.T01:CDS
GTGATGTTAATAGCAGTAAT+GGG 0.468047 3:-17050474 MsG0380012471.01.T01:CDS
ACGCCCAGTGGCCGGAGAAA+CGG 0.468591 3:-17050343 MsG0380012471.01.T01:CDS
CCGAGCATGGGAATGGGTGG+AGG 0.468607 3:-17050529 MsG0380012471.01.T01:CDS
CTTTCGAGGCACCGTTTCTC+CGG 0.469423 3:+17050332 None:intergenic
GGGGATGTTAGAGGTGGTGT+TGG 0.474545 3:-17050634 MsG0380012471.01.T01:CDS
AGCATGGGAATGGGTGGAGG+CGG 0.475408 3:-17050526 MsG0380012471.01.T01:CDS
GATGATAGGTATAGTAGTAG+AGG 0.476171 3:-17050724 MsG0380012471.01.T01:CDS
CTATTGCTAGAAGTGTACTT+AGG 0.477905 3:-17050288 MsG0380012471.01.T01:CDS
GTTGGAATTGGTAGTATTGG+TGG 0.482788 3:-17050616 MsG0380012471.01.T01:CDS
TTCTTACTCGGAGTCGTGGC+AGG 0.483069 3:-17050677 MsG0380012471.01.T01:CDS
GAGTTTAGAGGCGAGAGGAA+TGG 0.484276 3:-17050655 MsG0380012471.01.T01:CDS
GAGGAGGGATATTTGGCGGG+AGG 0.485725 3:-17050501 MsG0380012471.01.T01:CDS
AGGAAGGGATGAGTTTGTGT+TGG 0.494812 3:-17050437 MsG0380012471.01.T01:CDS
GAATGCACCGAGCATGGGAA+TGG 0.495277 3:-17050536 MsG0380012471.01.T01:CDS
CCTCCACCCATTCCCATGCT+CGG 0.495888 3:+17050529 None:intergenic
TTGGAGGAATGCACCGAGCA+TGG 0.498605 3:-17050542 MsG0380012471.01.T01:CDS
AATGGGTATCTTGGCAGAAA+AGG 0.499659 3:-17050457 MsG0380012471.01.T01:CDS
TGGGTGGAGGCGGAGGAGGA+GGG 0.499724 3:-17050516 MsG0380012471.01.T01:CDS
TCTACTTAACGCCCAGTGGC+CGG 0.503962 3:-17050351 MsG0380012471.01.T01:CDS
TTGTCGGGAGTAATAATGGC+GGG 0.511399 3:-17050858 MsG0380012471.01.T01:CDS
GCACCGTTTCTCCGGCCACT+GGG 0.516795 3:+17050340 None:intergenic
AAAGCTGCTTGGAGTATTTG+GGG 0.519040 3:-17050793 MsG0380012471.01.T01:CDS
GGAGGAGGAGGGATATTTGG+CGG 0.520109 3:-17050505 MsG0380012471.01.T01:CDS
GAATAATAATAAAGAGGAGG+AGG 0.523240 3:-17050746 MsG0380012471.01.T01:CDS
GTTTAGAGGCGAGAGGAATG+GGG 0.524669 3:-17050653 MsG0380012471.01.T01:CDS
GGAATTGGTAGTATTGGTGG+TGG 0.527086 3:-17050613 MsG0380012471.01.T01:CDS
CCAGTAAATGGAAAGCTGCT+TGG 0.529264 3:-17050804 MsG0380012471.01.T01:CDS
GATAGGTATAGTAGTAGAGG+TGG 0.531092 3:-17050721 MsG0380012471.01.T01:CDS
TGGAGGGAATAATAATAAAG+AGG 0.535223 3:-17050752 MsG0380012471.01.T01:CDS
TGGGGTGGAGCGTTCTTACT+CGG 0.538075 3:-17050689 MsG0380012471.01.T01:CDS
AATGCACCGAGCATGGGAAT+GGG 0.539420 3:-17050535 MsG0380012471.01.T01:CDS
ATTGGTAGTATTGGTGGTGG+TGG 0.540665 3:-17050610 MsG0380012471.01.T01:CDS
TGGAGGAATGCACCGAGCAT+GGG 0.549427 3:-17050541 MsG0380012471.01.T01:CDS
CGGAGAAACGGTGCCTCGAA+AGG 0.550290 3:-17050331 MsG0380012471.01.T01:CDS
GGGATGAGTTTGTGTTGGAG+AGG 0.556006 3:-17050432 MsG0380012471.01.T01:CDS
CCATTATCCATGCTGTTGGT+AGG 0.559362 3:+17050388 None:intergenic
TTTATACATCGTCGGAGTGG+AGG 0.560754 3:-17050769 MsG0380012471.01.T01:CDS
TGGATAATGGTGGTCTCTTG+AGG 0.561050 3:-17050375 MsG0380012471.01.T01:CDS
TTATACATCGTCGGAGTGGA+GGG 0.566386 3:-17050768 MsG0380012471.01.T01:CDS
GAAACGGTGCCTCGAAAGGA+AGG 0.570868 3:-17050327 MsG0380012471.01.T01:CDS
GCAATAGTAGTGTCAGTTGG+AGG 0.577464 3:-17050558 MsG0380012471.01.T01:CDS
GAGGAGGAGGGATATTTGGC+GGG 0.578373 3:-17050504 MsG0380012471.01.T01:CDS
GGTATCTTGGCAGAAAAGGA+AGG 0.581764 3:-17050453 MsG0380012471.01.T01:CDS
GGAGCAATAGTAGTGTCAGT+TGG 0.584572 3:-17050561 MsG0380012471.01.T01:CDS
ACCACCATTATCCATGCTGT+TGG 0.585092 3:+17050384 None:intergenic
AGGTGGAAATGGTAATGGGG+TGG 0.596305 3:-17050704 MsG0380012471.01.T01:CDS
GTCGGGAGTAATAATGGCGG+GGG 0.597059 3:-17050856 MsG0380012471.01.T01:CDS
TGTCGGGAGTAATAATGGCG+GGG 0.597219 3:-17050857 MsG0380012471.01.T01:CDS
GCACCGAGCATGGGAATGGG+TGG 0.602722 3:-17050532 MsG0380012471.01.T01:CDS
AGCGTTCTTACTCGGAGTCG+TGG 0.621651 3:-17050681 MsG0380012471.01.T01:CDS
GTGGTGGTAATGGTTTCGAT+AGG 0.624227 3:-17050594 MsG0380012471.01.T01:CDS
AGGGAATAATAATAAAGAGG+AGG 0.627615 3:-17050749 MsG0380012471.01.T01:CDS
AGGAATGGGGATGTTAGAGG+TGG 0.639066 3:-17050640 MsG0380012471.01.T01:CDS
ATATTCTCCTACCAACAGCA+TGG 0.640802 3:-17050395 MsG0380012471.01.T01:CDS
GTTTCGATAGGAAGATGTTG+AGG 0.641118 3:-17050582 MsG0380012471.01.T01:CDS
GTATCTTGGCAGAAAAGGAA+GGG 0.654337 3:-17050452 MsG0380012471.01.T01:CDS
AGGCTCTACTTAACGCCCAG+TGG 0.658591 3:-17050355 MsG0380012471.01.T01:CDS
GGCAGGAGTTTAGAGGCGAG+AGG 0.664485 3:-17050660 MsG0380012471.01.T01:CDS
TAGAGGTGGAAATGGTAATG+GGG 0.670255 3:-17050707 MsG0380012471.01.T01:CDS
ACCAACAGCATGGATAATGG+TGG 0.681176 3:-17050385 MsG0380012471.01.T01:CDS
GTTGTCGGGAGTAATAATGG+CGG 0.688552 3:-17050859 MsG0380012471.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AGGGAATAATAATAAAGAGG+AGG - Chr3:17050446-17050465 MsG0380012471.01.T01:CDS 30.0%
AGTGATGTTAATAGCAGTAA+TGG - Chr3:17050720-17050739 MsG0380012471.01.T01:CDS 30.0%
GAATAATAATAAAGAGGAGG+AGG - Chr3:17050449-17050468 MsG0380012471.01.T01:CDS 30.0%
GTGATGTTAATAGCAGTAAT+GGG - Chr3:17050721-17050740 MsG0380012471.01.T01:CDS 30.0%
TGGAGGGAATAATAATAAAG+AGG - Chr3:17050443-17050462 MsG0380012471.01.T01:CDS 30.0%
GATGATAGGTATAGTAGTAG+AGG - Chr3:17050471-17050490 MsG0380012471.01.T01:CDS 35.0%
TATAGTAGTAGAGGTGGAAA+TGG - Chr3:17050480-17050499 MsG0380012471.01.T01:CDS 35.0%
! AGAGATAATGGTTCTGTTGT+CGG - Chr3:17050321-17050340 MsG0380012471.01.T01:CDS 35.0%
! CTATTGCTAGAAGTGTACTT+AGG - Chr3:17050907-17050926 MsG0380012471.01.T01:CDS 35.0%
!! AATAGCAGTAATGGGTATCT+TGG - Chr3:17050729-17050748 MsG0380012471.01.T01:CDS 35.0%
!! TTTGGGGTTTTATACATCGT+CGG - Chr3:17050418-17050437 MsG0380012471.01.T01:CDS 35.0%
!!! TGTTCCGAGAGTTTTGAATT+GGG - Chr3:17050291-17050310 MsG0380012471.01.T01:CDS 35.0%
!!! TTGTTCCGAGAGTTTTGAAT+TGG - Chr3:17050290-17050309 MsG0380012471.01.T01:CDS 35.0%
AATGGGTATCTTGGCAGAAA+AGG - Chr3:17050738-17050757 MsG0380012471.01.T01:CDS 40.0%
AGCAATAGAATGAGCCTGAT+TGG + Chr3:17050895-17050914 None:intergenic 40.0%
AGTAGAGGTGGAAATGGTAA+TGG - Chr3:17050486-17050505 MsG0380012471.01.T01:CDS 40.0%
ATAAAGAGGAGGAGGATGAT+AGG - Chr3:17050457-17050476 MsG0380012471.01.T01:CDS 40.0%
ATATTCTCCTACCAACAGCA+TGG - Chr3:17050800-17050819 MsG0380012471.01.T01:CDS 40.0%
CGAAGAAGAGTTCCAGTAAA+TGG - Chr3:17050379-17050398 MsG0380012471.01.T01:CDS 40.0%
GATAGGTATAGTAGTAGAGG+TGG - Chr3:17050474-17050493 MsG0380012471.01.T01:CDS 40.0%
GTAGAGGTGGAAATGGTAAT+GGG - Chr3:17050487-17050506 MsG0380012471.01.T01:CDS 40.0%
GTATCTTGGCAGAAAAGGAA+GGG - Chr3:17050743-17050762 MsG0380012471.01.T01:CDS 40.0%
GTTTCGATAGGAAGATGTTG+AGG - Chr3:17050613-17050632 MsG0380012471.01.T01:CDS 40.0%
TCTGTTGTCGGGAGTAATAA+TGG - Chr3:17050333-17050352 MsG0380012471.01.T01:CDS 40.0%
! AAAGCTGCTTGGAGTATTTG+GGG - Chr3:17050402-17050421 MsG0380012471.01.T01:CDS 40.0%
! GAAAGCTGCTTGGAGTATTT+GGG - Chr3:17050401-17050420 MsG0380012471.01.T01:CDS 40.0%
! GAGATAATGGTTCTGTTGTC+GGG - Chr3:17050322-17050341 MsG0380012471.01.T01:CDS 40.0%
! GGTGTTGGAATTGGTAGTAT+TGG - Chr3:17050576-17050595 MsG0380012471.01.T01:CDS 40.0%
! GTTGGAATTGGTAGTATTGG+TGG - Chr3:17050579-17050598 MsG0380012471.01.T01:CDS 40.0%
! TAGAGGTGGAAATGGTAATG+GGG - Chr3:17050488-17050507 MsG0380012471.01.T01:CDS 40.0%
!!! GTTCCGAGAGTTTTGAATTG+GGG - Chr3:17050292-17050311 MsG0380012471.01.T01:CDS 40.0%
!!! TTCCGAGAGTTTTGAATTGG+GGG - Chr3:17050293-17050312 MsG0380012471.01.T01:CDS 40.0%
!!! TTGGGGGGTTTTAGAGATAA+TGG - Chr3:17050309-17050328 MsG0380012471.01.T01:CDS 40.0%
ACCACCATTATCCATGCTGT+TGG + Chr3:17050814-17050833 None:intergenic 45.0%
ACCCCCCAATTCAAAACTCT+CGG + Chr3:17050298-17050317 None:intergenic 45.0%
AGGAAGGGATGAGTTTGTGT+TGG - Chr3:17050758-17050777 MsG0380012471.01.T01:CDS 45.0%
AGTTTAGAGGCGAGAGGAAT+GGG - Chr3:17050541-17050560 MsG0380012471.01.T01:CDS 45.0%
AGTTTGTGTTGGAGAGGAAC+AGG - Chr3:17050769-17050788 MsG0380012471.01.T01:CDS 45.0%
CCAAGCAGCTTTCCATTTAC+TGG + Chr3:17050394-17050413 None:intergenic 45.0%
CCAGTAAATGGAAAGCTGCT+TGG - Chr3:17050391-17050410 MsG0380012471.01.T01:CDS 45.0%
CCATTATCCATGCTGTTGGT+AGG + Chr3:17050810-17050829 None:intergenic 45.0%
CCTACCAACAGCATGGATAA+TGG - Chr3:17050807-17050826 MsG0380012471.01.T01:CDS 45.0%
GCAATAGTAGTGTCAGTTGG+AGG - Chr3:17050637-17050656 MsG0380012471.01.T01:CDS 45.0%
GGAGCAATAGTAGTGTCAGT+TGG - Chr3:17050634-17050653 MsG0380012471.01.T01:CDS 45.0%
GGTATCTTGGCAGAAAAGGA+AGG - Chr3:17050742-17050761 MsG0380012471.01.T01:CDS 45.0%
GTTGTCGGGAGTAATAATGG+CGG - Chr3:17050336-17050355 MsG0380012471.01.T01:CDS 45.0%
TTATACATCGTCGGAGTGGA+GGG - Chr3:17050427-17050446 MsG0380012471.01.T01:CDS 45.0%
TTGTCGGGAGTAATAATGGC+GGG - Chr3:17050337-17050356 MsG0380012471.01.T01:CDS 45.0%
TTTATACATCGTCGGAGTGG+AGG - Chr3:17050426-17050445 MsG0380012471.01.T01:CDS 45.0%
! ACCAACAGCATGGATAATGG+TGG - Chr3:17050810-17050829 MsG0380012471.01.T01:CDS 45.0%
! GGAAAGCTGCTTGGAGTATT+TGG - Chr3:17050400-17050419 MsG0380012471.01.T01:CDS 45.0%
! GTTAGAGGTGGTGTTGGAAT+TGG - Chr3:17050567-17050586 MsG0380012471.01.T01:CDS 45.0%
! TGGATAATGGTGGTCTCTTG+AGG - Chr3:17050820-17050839 MsG0380012471.01.T01:CDS 45.0%
!! AGTATTGGTGGTGGTGGTAA+TGG - Chr3:17050591-17050610 MsG0380012471.01.T01:CDS 45.0%
!! ATTGGTAGTATTGGTGGTGG+TGG - Chr3:17050585-17050604 MsG0380012471.01.T01:CDS 45.0%
!! GGAATTGGTAGTATTGGTGG+TGG - Chr3:17050582-17050601 MsG0380012471.01.T01:CDS 45.0%
!! GGTTTTATACATCGTCGGAG+TGG - Chr3:17050423-17050442 MsG0380012471.01.T01:CDS 45.0%
!! GTGGTGGTAATGGTTTCGAT+AGG - Chr3:17050601-17050620 MsG0380012471.01.T01:CDS 45.0%
!!! TCCGAGAGTTTTGAATTGGG+GGG - Chr3:17050294-17050313 MsG0380012471.01.T01:CDS 45.0%
AATGCACCGAGCATGGGAAT+GGG - Chr3:17050660-17050679 MsG0380012471.01.T01:CDS 50.0%
AGGAATGGGGATGTTAGAGG+TGG - Chr3:17050555-17050574 MsG0380012471.01.T01:CDS 50.0%
CTCGAAAGGAAGGTCCAATC+AGG - Chr3:17050878-17050897 MsG0380012471.01.T01:CDS 50.0%
CTGATTGGACCTTCCTTTCG+AGG + Chr3:17050880-17050899 None:intergenic 50.0%
GAGAGGAATGGGGATGTTAG+AGG - Chr3:17050552-17050571 MsG0380012471.01.T01:CDS 50.0%
GAGTTTAGAGGCGAGAGGAA+TGG - Chr3:17050540-17050559 MsG0380012471.01.T01:CDS 50.0%
GGGATGAGTTTGTGTTGGAG+AGG - Chr3:17050763-17050782 MsG0380012471.01.T01:CDS 50.0%
GTTTAGAGGCGAGAGGAATG+GGG - Chr3:17050542-17050561 MsG0380012471.01.T01:CDS 50.0%
TGTCGGGAGTAATAATGGCG+GGG - Chr3:17050338-17050357 MsG0380012471.01.T01:CDS 50.0%
! GTAATAATGGCGGGGGTGAT+CGG - Chr3:17050346-17050365 MsG0380012471.01.T01:CDS 50.0%
!! AGGTGGAAATGGTAATGGGG+TGG - Chr3:17050491-17050510 MsG0380012471.01.T01:CDS 50.0%
AGCGTTCTTACTCGGAGTCG+TGG - Chr3:17050514-17050533 MsG0380012471.01.T01:CDS 55.0%
AGGCTCTACTTAACGCCCAG+TGG - Chr3:17050840-17050859 MsG0380012471.01.T01:CDS 55.0%
GAAACGGTGCCTCGAAAGGA+AGG - Chr3:17050868-17050887 MsG0380012471.01.T01:CDS 55.0%
GAATGCACCGAGCATGGGAA+TGG - Chr3:17050659-17050678 MsG0380012471.01.T01:CDS 55.0%
GAGGAGGAGGGATATTTGGC+GGG - Chr3:17050691-17050710 MsG0380012471.01.T01:CDS 55.0%
GAGTCGTGGCAGGAGTTTAG+AGG - Chr3:17050528-17050547 MsG0380012471.01.T01:CDS 55.0%
GGAGGAGGAGGGATATTTGG+CGG - Chr3:17050690-17050709 MsG0380012471.01.T01:CDS 55.0%
GGGGATGTTAGAGGTGGTGT+TGG - Chr3:17050561-17050580 MsG0380012471.01.T01:CDS 55.0%
GTCGGGAGTAATAATGGCGG+GGG - Chr3:17050339-17050358 MsG0380012471.01.T01:CDS 55.0%
TCTACTTAACGCCCAGTGGC+CGG - Chr3:17050844-17050863 MsG0380012471.01.T01:CDS 55.0%
TGGAGGAATGCACCGAGCAT+GGG - Chr3:17050654-17050673 MsG0380012471.01.T01:CDS 55.0%
TTCTTACTCGGAGTCGTGGC+AGG - Chr3:17050518-17050537 MsG0380012471.01.T01:CDS 55.0%
TTGGAGGAATGCACCGAGCA+TGG - Chr3:17050653-17050672 MsG0380012471.01.T01:CDS 55.0%
! TGGGGTGGAGCGTTCTTACT+CGG - Chr3:17050506-17050525 MsG0380012471.01.T01:CDS 55.0%
!! CTTTCGAGGCACCGTTTCTC+CGG + Chr3:17050866-17050885 None:intergenic 55.0%
AGCATGGGAATGGGTGGAGG+CGG - Chr3:17050669-17050688 MsG0380012471.01.T01:CDS 60.0%
CCTCCACCCATTCCCATGCT+CGG + Chr3:17050669-17050688 None:intergenic 60.0%
CGGAGAAACGGTGCCTCGAA+AGG - Chr3:17050864-17050883 MsG0380012471.01.T01:CDS 60.0%
GAGGAGGGATATTTGGCGGG+AGG - Chr3:17050694-17050713 MsG0380012471.01.T01:CDS 60.0%
GGCAGGAGTTTAGAGGCGAG+AGG - Chr3:17050535-17050554 MsG0380012471.01.T01:CDS 60.0%
GGCGGAGGAGGAGGGATATT+TGG - Chr3:17050687-17050706 MsG0380012471.01.T01:CDS 60.0%
! AATGGCGGGGGTGATCGGAA+AGG - Chr3:17050351-17050370 MsG0380012471.01.T01:CDS 60.0%
ACGCCCAGTGGCCGGAGAAA+CGG - Chr3:17050852-17050871 MsG0380012471.01.T01:CDS 65.0%
ATGGGAATGGGTGGAGGCGG+AGG - Chr3:17050672-17050691 MsG0380012471.01.T01:CDS 65.0%
CCGAGCATGGGAATGGGTGG+AGG - Chr3:17050666-17050685 MsG0380012471.01.T01:CDS 65.0%
GCACCGAGCATGGGAATGGG+TGG - Chr3:17050663-17050682 MsG0380012471.01.T01:CDS 65.0%
GCACCGTTTCTCCGGCCACT+GGG + Chr3:17050858-17050877 None:intergenic 65.0%
GCGGGGGTGATCGGAAAGGA+GGG - Chr3:17050355-17050374 MsG0380012471.01.T01:CDS 65.0%
ATGGGTGGAGGCGGAGGAGG+AGG - Chr3:17050678-17050697 MsG0380012471.01.T01:CDS 70.0%
GGAATGGGTGGAGGCGGAGG+AGG - Chr3:17050675-17050694 MsG0380012471.01.T01:CDS 70.0%
GGCACCGTTTCTCCGGCCAC+TGG + Chr3:17050859-17050878 None:intergenic 70.0%
GGCGGGGGTGATCGGAAAGG+AGG - Chr3:17050354-17050373 MsG0380012471.01.T01:CDS 70.0%
TGGGTGGAGGCGGAGGAGGA+GGG - Chr3:17050679-17050698 MsG0380012471.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 17050279 17050938 17050279 ID=MsG0380012471.01;Name=MsG0380012471.01
Chr3 mRNA 17050279 17050938 17050279 ID=MsG0380012471.01.T01;Parent=MsG0380012471.01;Name=MsG0380012471.01.T01;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|1|1|0|219
Chr3 exon 17050279 17050938 17050279 ID=MsG0380012471.01.T01:exon:9329;Parent=MsG0380012471.01.T01
Chr3 CDS 17050279 17050938 17050279 ID=MsG0380012471.01.T01:cds;Parent=MsG0380012471.01.T01
Gene Sequence

>MsG0380012471.01.T01

TTGAGGGATGATTGTTCCGAGAGTTTTGAATTGGGGGGTTTTAGAGATAATGGTTCTGTTGTCGGGAGTAATAATGGCGGGGGTGATCGGAAAGGAGGGTCGAAGAAGAGTTCCAGTAAATGGAAAGCTGCTTGGAGTATTTGGGGTTTTATACATCGTCGGAGTGGAGGGAATAATAATAAAGAGGAGGAGGATGATAGGTATAGTAGTAGAGGTGGAAATGGTAATGGGGTGGAGCGTTCTTACTCGGAGTCGTGGCAGGAGTTTAGAGGCGAGAGGAATGGGGATGTTAGAGGTGGTGTTGGAATTGGTAGTATTGGTGGTGGTGGTAATGGTTTCGATAGGAAGATGTTGAGGAGCAATAGTAGTGTCAGTTGGAGGAATGCACCGAGCATGGGAATGGGTGGAGGCGGAGGAGGAGGGATATTTGGCGGGAGGAAGAGTGATGTTAATAGCAGTAATGGGTATCTTGGCAGAAAAGGAAGGGATGAGTTTGTGTTGGAGAGGAACAGGAGTGCGAGATATTCTCCTACCAACAGCATGGATAATGGTGGTCTCTTGAGGCTCTACTTAACGCCCAGTGGCCGGAGAAACGGTGCCTCGAAAGGAAGGTCCAATCAGGCTCATTCTATTGCTAGAAGTGTACTTAGGTTGTATTGA

Protein sequence

>MsG0380012471.01.T01

LRDDCSESFELGGFRDNGSVVGSNNGGGDRKGGSKKSSSKWKAAWSIWGFIHRRSGGNNNKEEEDDRYSSRGGNGNGVERSYSESWQEFRGERNGDVRGGVGIGSIGGGGNGFDRKMLRSNSSVSWRNAPSMGMGGGGGGGIFGGRKSDVNSSNGYLGRKGRDEFVLERNRSARYSPTNSMDNGGLLRLYLTPSGRRNGASKGRSNQAHSIARSVLRLY*