Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005270.01.T01 | XP_003591986.1 | 98.361 | 122 | 2 | 0 | 1 | 122 | 16 | 137 | 3.41E-66 | 206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005270.01.T01 | G7I9P0 | 98.361 | 122 | 2 | 0 | 1 | 122 | 16 | 137 | 1.63e-66 | 206 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000271.01 | MsG0180005270.01 | 0.800471 | 1.419378e-48 | 6.614251e-46 |
| MsG0180000546.01 | MsG0180005270.01 | 0.817640 | 2.970199e-52 | 2.175005e-49 |
| MsG0180005270.01 | MsG0180005446.01 | 0.825074 | 5.714306e-54 | 5.155145e-51 |
| MsG0180005270.01 | MsG0180005881.01 | -0.801677 | 8.042926e-49 | 3.864164e-46 |
| MsG0180005270.01 | MsG0180006220.01 | 0.803727 | 3.036754e-49 | 1.537409e-46 |
| MsG0180005270.01 | MsG0280010204.01 | 0.837199 | 5.983896e-57 | 7.715742e-54 |
| MsG0180005270.01 | MsG0280011376.01 | 0.831527 | 1.587550e-55 | 1.727377e-52 |
| MsG0180005270.01 | MsG0380011895.01 | 0.815859 | 7.448054e-52 | 5.194474e-49 |
| MsG0180005270.01 | MsG0380013853.01 | 0.829757 | 4.306016e-55 | 4.448878e-52 |
| MsG0180005270.01 | MsG0380014770.01 | 0.803486 | 3.406521e-49 | 1.714007e-46 |
| MsG0180005270.01 | MsG0380016182.01 | 0.808245 | 3.404255e-50 | 1.936752e-47 |
| MsG0180005270.01 | MsG0380017023.01 | 0.803206 | 3.893569e-49 | 1.944975e-46 |
| MsG0180005270.01 | MsG0380017791.01 | 0.811619 | 6.395846e-51 | 3.977784e-48 |
| MsG0180005270.01 | MsG0480018995.01 | 0.816354 | 5.773166e-52 | 4.081507e-49 |
| MsG0180005270.01 | MsG0480020843.01 | 0.825184 | 5.384020e-54 | 4.872458e-51 |
| MsG0180005270.01 | MsG0480021776.01 | -0.812235 | 4.694702e-51 | 2.968830e-48 |
| MsG0180005270.01 | MsG0480022246.01 | 0.817937 | 2.544993e-52 | 1.878903e-49 |
| MsG0180005270.01 | MsG0680030555.01 | 0.804673 | 1.929630e-49 | 1.000972e-46 |
| MsG0180005270.01 | MsG0680030636.01 | 0.813997 | 1.927771e-51 | 1.278128e-48 |
| MsG0180005270.01 | MsG0780037082.01 | 0.839818 | 1.261740e-57 | 1.763002e-54 |
| MsG0180005270.01 | MsG0780038636.01 | 0.819454 | 1.151927e-52 | 8.868592e-50 |
| MsG0180005270.01 | MsG0880042794.01 | 0.803173 | 3.956015e-49 | 1.974512e-46 |
| MsG0180005270.01 | MsG0880042948.01 | 0.801613 | 8.290625e-49 | 3.976696e-46 |
| MsG0180005270.01 | MsG0880046930.01 | 0.808884 | 2.487101e-50 | 1.438719e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005270.01.T01 | MTR_1g095950 | 98.361 | 122 | 2 | 0 | 1 | 122 | 16 | 137 | 4.12e-70 | 206 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 70 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCGGGCCACGGTCCAAAT+TGG | 0.259697 | 1:-89409031 | MsG0180005270.01.T01:CDS |
| TCTGGCTTTGGTAGAGGTTA+TGG | 0.264164 | 1:-89408936 | MsG0180005270.01.T01:CDS |
| AGTGGATGGGGTTACGGTTC+AGG | 0.271763 | 1:-89408975 | MsG0180005270.01.T01:CDS |
| AGAGGTTATGGCTATGGTTT+TGG | 0.272187 | 1:-89408924 | MsG0180005270.01.T01:CDS |
| GGTTCAGGACATTCTCCTTC+TGG | 0.275589 | 1:-89408954 | MsG0180005270.01.T01:CDS |
| GGAAGTGGTTCTGGCAATTC+AGG | 0.279092 | 1:-89408831 | MsG0180005270.01.T01:CDS |
| GGTGCTCATGGTGGTGGTTA+TGG | 0.280938 | 1:-89408852 | MsG0180005270.01.T01:CDS |
| GGTGGTTATGGAAGTGGTTC+TGG | 0.286337 | 1:-89408840 | MsG0180005270.01.T01:CDS |
| TGGGGTTACGGTTCAGGTTC+AGG | 0.287425 | 1:-89408969 | MsG0180005270.01.T01:CDS |
| CTCCGAAGGTGACCGATTAT+TGG | 0.290144 | 1:+89408782 | None:intergenic |
| TCTGGATCCGGGTCTGGTTA+TGG | 0.298117 | 1:-89408888 | MsG0180005270.01.T01:CDS |
| ACCGGGTCTGGGTCTGGATC+CGG | 0.302126 | 1:-89408900 | MsG0180005270.01.T01:CDS |
| GCCACTGCTGGCTGCGGCCA+TGG | 0.313937 | 1:+89409103 | None:intergenic |
| CCCCAGCTATAGTCCCAATT+TGG | 0.314443 | 1:+89409017 | None:intergenic |
| TTTGGAACCGGGTCTGGGTC+TGG | 0.316778 | 1:-89408906 | MsG0180005270.01.T01:CDS |
| TCCGACAGGTGCAAGTGGTT+CGG | 0.329780 | 1:-89409048 | MsG0180005270.01.T01:CDS |
| GGACATTCTCCTTCTGGCTT+TGG | 0.332030 | 1:-89408948 | MsG0180005270.01.T01:CDS |
| CCGACAGGTGCAAGTGGTTC+GGG | 0.360896 | 1:-89409047 | MsG0180005270.01.T01:CDS |
| TCGGTCACCTTCGGAGTCTA+AGG | 0.368892 | 1:-89408775 | MsG0180005270.01.T01:CDS |
| GTCTGCACCAGGAAGTGGAT+GGG | 0.371552 | 1:-89408988 | MsG0180005270.01.T01:CDS |
| TCCGGGTCTGGTTATGGATA+TGG | 0.372940 | 1:-89408882 | MsG0180005270.01.T01:CDS |
| CCGTAACCCCATCCACTTCC+TGG | 0.374994 | 1:+89408981 | None:intergenic |
| GGTCTGCACCAGGAAGTGGA+TGG | 0.384555 | 1:-89408989 | MsG0180005270.01.T01:CDS |
| CCGGGTCTGGGTCTGGATCC+GGG | 0.384946 | 1:-89408899 | MsG0180005270.01.T01:CDS |
| TCTGGCAATTCAGGCGGTGG+AGG | 0.390126 | 1:-89408822 | MsG0180005270.01.T01:CDS |
| TGGGACTATAGCTGGGGATG+GGG | 0.391784 | 1:-89409011 | MsG0180005270.01.T01:CDS |
| TAGCTTTCTTCCGCCACTGC+TGG | 0.402255 | 1:+89409091 | None:intergenic |
| TCTGGGTCTGGATCCGGGTC+TGG | 0.404022 | 1:-89408894 | MsG0180005270.01.T01:CDS |
| TTCGGGCCACGGTCCAAATT+GGG | 0.409857 | 1:-89409030 | MsG0180005270.01.T01:CDS |
| TCTCCTTCTGGCTTTGGTAG+AGG | 0.416778 | 1:-89408942 | MsG0180005270.01.T01:CDS |
| CCAGGAAGTGGATGGGGTTA+CGG | 0.422757 | 1:-89408981 | MsG0180005270.01.T01:CDS |
| TTTGGTAGAGGTTATGGCTA+TGG | 0.433764 | 1:-89408930 | MsG0180005270.01.T01:CDS |
| GTCCAAATTGGGACTATAGC+TGG | 0.434287 | 1:-89409019 | MsG0180005270.01.T01:CDS |
| GGGACTATAGCTGGGGATGG+GGG | 0.436504 | 1:-89409010 | MsG0180005270.01.T01:CDS |
| GGCGGTGGAGGGCATGGTGG+TGG | 0.444613 | 1:-89408810 | MsG0180005270.01.T01:CDS |
| AATTCAGGCGGTGGAGGGCA+TGG | 0.452407 | 1:-89408816 | MsG0180005270.01.T01:CDS |
| TTTAATTACTCATGGTTGGT+TGG | 0.458788 | 1:+89408746 | None:intergenic |
| TCTTCCGCCACTGCTGGCTG+CGG | 0.464894 | 1:+89409097 | None:intergenic |
| TATGGTAGTGGTGGTGCTCA+TGG | 0.465660 | 1:-89408864 | MsG0180005270.01.T01:CDS |
| GGTGCAAGTGGTTCGGGCCA+CGG | 0.474288 | 1:-89409041 | MsG0180005270.01.T01:CDS |
| AGTGGTGGTGCTCATGGTGG+TGG | 0.480579 | 1:-89408858 | MsG0180005270.01.T01:CDS |
| TCCAAATTGGGACTATAGCT+GGG | 0.483029 | 1:-89409018 | MsG0180005270.01.T01:CDS |
| AACCAATAATCGGTCACCTT+CGG | 0.485230 | 1:-89408784 | MsG0180005270.01.T01:CDS |
| TTAATTTAATTACTCATGGT+TGG | 0.488357 | 1:+89408742 | None:intergenic |
| TTGGGACTATAGCTGGGGAT+GGG | 0.492750 | 1:-89409012 | MsG0180005270.01.T01:CDS |
| CTGGCAATTCAGGCGGTGGA+GGG | 0.495997 | 1:-89408821 | MsG0180005270.01.T01:CDS |
| TCCATGGCCGCAGCCAGCAG+TGG | 0.511233 | 1:-89409104 | MsG0180005270.01.T01:CDS |
| CATGGTGGTGGTTATGGAAG+TGG | 0.512562 | 1:-89408846 | MsG0180005270.01.T01:CDS |
| ATGGCCGCAGCCAGCAGTGG+CGG | 0.520646 | 1:-89409101 | MsG0180005270.01.T01:CDS |
| GCAAGCGGTGGTTCTCCGAC+AGG | 0.530173 | 1:-89409062 | MsG0180005270.01.T01:CDS |
| GTGGTGGTAGAACCAATAAT+CGG | 0.540663 | 1:-89408794 | MsG0180005270.01.T01:CDS |
| GGTTCTGGCAATTCAGGCGG+TGG | 0.551946 | 1:-89408825 | MsG0180005270.01.T01:CDS |
| TCTGCACCAGGAAGTGGATG+GGG | 0.554469 | 1:-89408987 | MsG0180005270.01.T01:CDS |
| CGGTCACCTTCGGAGTCTAA+GGG | 0.558343 | 1:-89408774 | MsG0180005270.01.T01:CDS |
| CCCGGATCCAGACCCAGACC+CGG | 0.567752 | 1:+89408899 | None:intergenic |
| ATTGGGACTATAGCTGGGGA+TGG | 0.573906 | 1:-89409013 | MsG0180005270.01.T01:CDS |
| TCTGGTTATGGATATGGTAG+TGG | 0.576517 | 1:-89408876 | MsG0180005270.01.T01:CDS |
| CCCGAACCACTTGCACCTGT+CGG | 0.592937 | 1:+89409047 | None:intergenic |
| TCAGGCGGTGGAGGGCATGG+TGG | 0.594015 | 1:-89408813 | MsG0180005270.01.T01:CDS |
| AAGCTAGACACGGCAAGCGG+TGG | 0.607144 | 1:-89409074 | MsG0180005270.01.T01:CDS |
| GGTTATGGATATGGTAGTGG+TGG | 0.613803 | 1:-89408873 | MsG0180005270.01.T01:CDS |
| GGTAGTGGTGGTGCTCATGG+TGG | 0.614244 | 1:-89408861 | MsG0180005270.01.T01:CDS |
| GGTTCTCCGACAGGTGCAAG+TGG | 0.627044 | 1:-89409053 | MsG0180005270.01.T01:CDS |
| ACCATATCCATAACCAGACC+CGG | 0.634754 | 1:+89408881 | None:intergenic |
| CCAAATTGGGACTATAGCTG+GGG | 0.653928 | 1:-89409017 | MsG0180005270.01.T01:CDS |
| TAACCTCTACCAAAGCCAGA+AGG | 0.659441 | 1:+89408939 | None:intergenic |
| AGTGGTTCTGGCAATTCAGG+CGG | 0.663940 | 1:-89408828 | MsG0180005270.01.T01:CDS |
| TATAGTCCCAATTTGGACCG+TGG | 0.667912 | 1:+89409024 | None:intergenic |
| AGAAAGCTAGACACGGCAAG+CGG | 0.701647 | 1:-89409077 | MsG0180005270.01.T01:CDS |
| TGGCGGAAGAAAGCTAGACA+CGG | 0.719665 | 1:-89409084 | MsG0180005270.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AACCAATAATCGGTCACCTT+CGG | - | Chr1:89409072-89409091 | MsG0180005270.01.T01:CDS | 40.0% | |
| GTGGTGGTAGAACCAATAAT+CGG | - | Chr1:89409062-89409081 | MsG0180005270.01.T01:CDS | 40.0% | |
| TCCAAATTGGGACTATAGCT+GGG | - | Chr1:89408838-89408857 | MsG0180005270.01.T01:CDS | 40.0% | |
| TCTGGTTATGGATATGGTAG+TGG | - | Chr1:89408980-89408999 | MsG0180005270.01.T01:CDS | 40.0% | |
| TTTGGTAGAGGTTATGGCTA+TGG | - | Chr1:89408926-89408945 | MsG0180005270.01.T01:CDS | 40.0% | |
| ! | AGAGGTTATGGCTATGGTTT+TGG | - | Chr1:89408932-89408951 | MsG0180005270.01.T01:CDS | 40.0% |
| !!! | TATGGCTATGGTTTTGGAAC+CGG | - | Chr1:89408938-89408957 | MsG0180005270.01.T01:CDS | 40.0% |
| ACCATATCCATAACCAGACC+CGG | + | Chr1:89408978-89408997 | None:intergenic | 45.0% | |
| CCAAATTGGGACTATAGCTG+GGG | - | Chr1:89408839-89408858 | MsG0180005270.01.T01:CDS | 45.0% | |
| GTCCAAATTGGGACTATAGC+TGG | - | Chr1:89408837-89408856 | MsG0180005270.01.T01:CDS | 45.0% | |
| TAACCTCTACCAAAGCCAGA+AGG | + | Chr1:89408920-89408939 | None:intergenic | 45.0% | |
| TATAGTCCCAATTTGGACCG+TGG | + | Chr1:89408835-89408854 | None:intergenic | 45.0% | |
| ! | GTTTTACCCTTAGACTCCGA+AGG | + | Chr1:89409091-89409110 | None:intergenic | 45.0% |
| !! | GGTTATGGATATGGTAGTGG+TGG | - | Chr1:89408983-89409002 | MsG0180005270.01.T01:CDS | 45.0% |
| !! | TCTGGCTTTGGTAGAGGTTA+TGG | - | Chr1:89408920-89408939 | MsG0180005270.01.T01:CDS | 45.0% |
| !!! | ATGGCTATGGTTTTGGAACC+GGG | - | Chr1:89408939-89408958 | MsG0180005270.01.T01:CDS | 45.0% |
| AGAAAGCTAGACACGGCAAG+CGG | - | Chr1:89408779-89408798 | MsG0180005270.01.T01:CDS | 50.0% | |
| ATTGGGACTATAGCTGGGGA+TGG | - | Chr1:89408843-89408862 | MsG0180005270.01.T01:CDS | 50.0% | |
| CCCCAGCTATAGTCCCAATT+TGG | + | Chr1:89408842-89408861 | None:intergenic | 50.0% | |
| CTCCGAAGGTGACCGATTAT+TGG | + | Chr1:89409077-89409096 | None:intergenic | 50.0% | |
| GGTGGTTATGGAAGTGGTTC+TGG | - | Chr1:89409016-89409035 | MsG0180005270.01.T01:CDS | 50.0% | |
| GGTTCAGGACATTCTCCTTC+TGG | - | Chr1:89408902-89408921 | MsG0180005270.01.T01:CDS | 50.0% | |
| TCCGGGTCTGGTTATGGATA+TGG | - | Chr1:89408974-89408993 | MsG0180005270.01.T01:CDS | 50.0% | |
| TGGCGGAAGAAAGCTAGACA+CGG | - | Chr1:89408772-89408791 | MsG0180005270.01.T01:CDS | 50.0% | |
| TTGGGACTATAGCTGGGGAT+GGG | - | Chr1:89408844-89408863 | MsG0180005270.01.T01:CDS | 50.0% | |
| !! | AGTGGTTCTGGCAATTCAGG+CGG | - | Chr1:89409028-89409047 | MsG0180005270.01.T01:CDS | 50.0% |
| !! | CATGGTGGTGGTTATGGAAG+TGG | - | Chr1:89409010-89409029 | MsG0180005270.01.T01:CDS | 50.0% |
| !! | GGAAGTGGTTCTGGCAATTC+AGG | - | Chr1:89409025-89409044 | MsG0180005270.01.T01:CDS | 50.0% |
| !! | GGACATTCTCCTTCTGGCTT+TGG | - | Chr1:89408908-89408927 | MsG0180005270.01.T01:CDS | 50.0% |
| !! | TATGGTAGTGGTGGTGCTCA+TGG | - | Chr1:89408992-89409011 | MsG0180005270.01.T01:CDS | 50.0% |
| !! | TCTCCTTCTGGCTTTGGTAG+AGG | - | Chr1:89408914-89408933 | MsG0180005270.01.T01:CDS | 50.0% |
| !!! | ATGGTTTTGGAACCGGGTCT+GGG | - | Chr1:89408945-89408964 | MsG0180005270.01.T01:CDS | 50.0% |
| !!! | TATGGTTTTGGAACCGGGTC+TGG | - | Chr1:89408944-89408963 | MsG0180005270.01.T01:CDS | 50.0% |
| AGTGGATGGGGTTACGGTTC+AGG | - | Chr1:89408881-89408900 | MsG0180005270.01.T01:CDS | 55.0% | |
| CCAGGAAGTGGATGGGGTTA+CGG | - | Chr1:89408875-89408894 | MsG0180005270.01.T01:CDS | 55.0% | |
| CGGTCACCTTCGGAGTCTAA+GGG | - | Chr1:89409082-89409101 | MsG0180005270.01.T01:CDS | 55.0% | |
| GTCTGCACCAGGAAGTGGAT+GGG | - | Chr1:89408868-89408887 | MsG0180005270.01.T01:CDS | 55.0% | |
| TAGCTTTCTTCCGCCACTGC+TGG | + | Chr1:89408768-89408787 | None:intergenic | 55.0% | |
| TCCGACAGGTGCAAGTGGTT+CGG | - | Chr1:89408808-89408827 | MsG0180005270.01.T01:CDS | 55.0% | |
| TCGGTCACCTTCGGAGTCTA+AGG | - | Chr1:89409081-89409100 | MsG0180005270.01.T01:CDS | 55.0% | |
| TCTGCACCAGGAAGTGGATG+GGG | - | Chr1:89408869-89408888 | MsG0180005270.01.T01:CDS | 55.0% | |
| TCTGGATCCGGGTCTGGTTA+TGG | - | Chr1:89408968-89408987 | MsG0180005270.01.T01:CDS | 55.0% | |
| TGGGACTATAGCTGGGGATG+GGG | - | Chr1:89408845-89408864 | MsG0180005270.01.T01:CDS | 55.0% | |
| TTCGGGCCACGGTCCAAATT+GGG | - | Chr1:89408826-89408845 | MsG0180005270.01.T01:CDS | 55.0% | |
| ! | TGGGGTTACGGTTCAGGTTC+AGG | - | Chr1:89408887-89408906 | MsG0180005270.01.T01:CDS | 55.0% |
| !! | GGTGCTCATGGTGGTGGTTA+TGG | - | Chr1:89409004-89409023 | MsG0180005270.01.T01:CDS | 55.0% |
| AAGCTAGACACGGCAAGCGG+TGG | - | Chr1:89408782-89408801 | MsG0180005270.01.T01:CDS | 60.0% | |
| AATTCAGGCGGTGGAGGGCA+TGG | - | Chr1:89409040-89409059 | MsG0180005270.01.T01:CDS | 60.0% | |
| CCCGAACCACTTGCACCTGT+CGG | + | Chr1:89408812-89408831 | None:intergenic | 60.0% | |
| CCGACAGGTGCAAGTGGTTC+GGG | - | Chr1:89408809-89408828 | MsG0180005270.01.T01:CDS | 60.0% | |
| CCGTAACCCCATCCACTTCC+TGG | + | Chr1:89408878-89408897 | None:intergenic | 60.0% | |
| CTGGCAATTCAGGCGGTGGA+GGG | - | Chr1:89409035-89409054 | MsG0180005270.01.T01:CDS | 60.0% | |
| GGGACTATAGCTGGGGATGG+GGG | - | Chr1:89408846-89408865 | MsG0180005270.01.T01:CDS | 60.0% | |
| GGTCTGCACCAGGAAGTGGA+TGG | - | Chr1:89408867-89408886 | MsG0180005270.01.T01:CDS | 60.0% | |
| GGTTCTCCGACAGGTGCAAG+TGG | - | Chr1:89408803-89408822 | MsG0180005270.01.T01:CDS | 60.0% | |
| GTTCGGGCCACGGTCCAAAT+TGG | - | Chr1:89408825-89408844 | MsG0180005270.01.T01:CDS | 60.0% | |
| TCTGGCAATTCAGGCGGTGG+AGG | - | Chr1:89409034-89409053 | MsG0180005270.01.T01:CDS | 60.0% | |
| ! | AGTGGTGGTGCTCATGGTGG+TGG | - | Chr1:89408998-89409017 | MsG0180005270.01.T01:CDS | 60.0% |
| ! | GGTAGTGGTGGTGCTCATGG+TGG | - | Chr1:89408995-89409014 | MsG0180005270.01.T01:CDS | 60.0% |
| ! | GGTTCTGGCAATTCAGGCGG+TGG | - | Chr1:89409031-89409050 | MsG0180005270.01.T01:CDS | 60.0% |
| ! | TTTGGAACCGGGTCTGGGTC+TGG | - | Chr1:89408950-89408969 | MsG0180005270.01.T01:CDS | 60.0% |
| ACCGGGTCTGGGTCTGGATC+CGG | - | Chr1:89408956-89408975 | MsG0180005270.01.T01:CDS | 65.0% | |
| GCAAGCGGTGGTTCTCCGAC+AGG | - | Chr1:89408794-89408813 | MsG0180005270.01.T01:CDS | 65.0% | |
| TCTGGGTCTGGATCCGGGTC+TGG | - | Chr1:89408962-89408981 | MsG0180005270.01.T01:CDS | 65.0% | |
| TGGGGGTCTGCACCAGGAAG+TGG | - | Chr1:89408863-89408882 | MsG0180005270.01.T01:CDS | 65.0% | |
| ! | GGTGCAAGTGGTTCGGGCCA+CGG | - | Chr1:89408815-89408834 | MsG0180005270.01.T01:CDS | 65.0% |
| ! | TCTTCCGCCACTGCTGGCTG+CGG | + | Chr1:89408762-89408781 | None:intergenic | 65.0% |
| ATGGCCGCAGCCAGCAGTGG+CGG | - | Chr1:89408755-89408774 | MsG0180005270.01.T01:CDS | 70.0% | |
| CCCGGATCCAGACCCAGACC+CGG | + | Chr1:89408960-89408979 | None:intergenic | 70.0% | |
| CCGGGTCTGGGTCTGGATCC+GGG | - | Chr1:89408957-89408976 | MsG0180005270.01.T01:CDS | 70.0% | |
| TGGGGATGGGGGTCTGCACC+AGG | - | Chr1:89408857-89408876 | MsG0180005270.01.T01:CDS | 70.0% | |
| ! | TCAGGCGGTGGAGGGCATGG+TGG | - | Chr1:89409043-89409062 | MsG0180005270.01.T01:CDS | 70.0% |
| ! | GGCGGTGGAGGGCATGGTGG+TGG | - | Chr1:89409046-89409065 | MsG0180005270.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 89408755 | 89409123 | 89408755 | ID=MsG0180005270.01;Name=MsG0180005270.01 |
| Chr1 | mRNA | 89408755 | 89409123 | 89408755 | ID=MsG0180005270.01.T01;Parent=MsG0180005270.01;Name=MsG0180005270.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|122 |
| Chr1 | exon | 89408755 | 89409123 | 89408755 | ID=MsG0180005270.01.T01:exon:47744;Parent=MsG0180005270.01.T01 |
| Chr1 | CDS | 89408755 | 89409123 | 89408755 | ID=MsG0180005270.01.T01:cds;Parent=MsG0180005270.01.T01 |
| Gene Sequence |
| Protein sequence |
