Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006220.01.T01 | MCH89249.1 | 100 | 102 | 0 | 0 | 52 | 153 | 14 | 115 | 2.44E-70 | 219 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006220.01.T01 | Q852L0 | 83.333 | 102 | 17 | 0 | 52 | 153 | 587 | 688 | 2.11E-55 | 188 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006220.01.T01 | A0A392MQI3 | 100.000 | 102 | 0 | 0 | 52 | 153 | 14 | 115 | 1.16e-70 | 219 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048817.01 | MsG0180006220.01 | 0.812674 | 3.764645e-51 | 2.408551e-48 |
| MsG0180000152.01 | MsG0180006220.01 | 0.858224 | 9.541476e-63 | 2.417507e-59 |
| MsG0180000271.01 | MsG0180006220.01 | 0.808513 | 2.984384e-50 | 1.709770e-47 |
| MsG0180000544.01 | MsG0180006220.01 | -0.804445 | 2.152525e-49 | 1.110038e-46 |
| MsG0180000546.01 | MsG0180006220.01 | 0.870899 | 1.029129e-66 | 4.071950e-63 |
| MsG0180000550.01 | MsG0180006220.01 | 0.874477 | 6.548364e-68 | 2.952407e-64 |
| MsG0180000669.01 | MsG0180006220.01 | 0.851803 | 6.992901e-61 | 1.431974e-57 |
| MsG0180000673.01 | MsG0180006220.01 | 0.808432 | 3.106495e-50 | 1.776000e-47 |
| MsG0180000679.01 | MsG0180006220.01 | 0.861215 | 1.200157e-63 | 3.370024e-60 |
| MsG0180001063.01 | MsG0180006220.01 | 0.808560 | 2.916797e-50 | 1.673049e-47 |
| MsG0180001141.01 | MsG0180006220.01 | 0.820866 | 5.470471e-53 | 4.380502e-50 |
| MsG0180001213.01 | MsG0180006220.01 | 0.827221 | 1.763501e-54 | 1.691751e-51 |
| MsG0180001663.01 | MsG0180006220.01 | 0.813167 | 2.935999e-51 | 1.903078e-48 |
| MsG0180001712.01 | MsG0180006220.01 | 0.821533 | 3.839163e-53 | 3.131577e-50 |
| MsG0180001795.01 | MsG0180006220.01 | 0.819344 | 1.219877e-52 | 9.361763e-50 |
| MsG0180002140.01 | MsG0180006220.01 | 0.808605 | 2.852490e-50 | 1.638041e-47 |
| MsG0180002482.01 | MsG0180006220.01 | 0.879063 | 1.690802e-69 | 9.037649e-66 |
| MsG0180002940.01 | MsG0180006220.01 | -0.832899 | 7.263733e-56 | 8.231089e-53 |
| MsG0180003088.01 | MsG0180006220.01 | 0.832254 | 1.049738e-55 | 1.166812e-52 |
| MsG0180003124.01 | MsG0180006220.01 | 0.803692 | 3.087216e-49 | 1.561573e-46 |
| MsG0180003697.01 | MsG0180006220.01 | 0.823437 | 1.385583e-53 | 1.192962e-50 |
| MsG0180003854.01 | MsG0180006220.01 | 0.820927 | 5.295917e-53 | 4.247858e-50 |
| MsG0180003952.01 | MsG0180006220.01 | 0.869417 | 3.145417e-66 | 1.179696e-62 |
| MsG0180004025.01 | MsG0180006220.01 | 0.818476 | 1.921343e-52 | 1.439785e-49 |
| MsG0180004886.01 | MsG0180006220.01 | -0.858626 | 7.240325e-63 | 1.859451e-59 |
| MsG0180004997.01 | MsG0180006220.01 | 0.845714 | 3.418408e-59 | 5.748369e-56 |
| MsG0180005052.01 | MsG0180006220.01 | 0.840663 | 7.590874e-58 | 1.088818e-54 |
| MsG0180005193.01 | MsG0180006220.01 | 0.844154 | 9.014509e-59 | 1.442434e-55 |
| MsG0180005270.01 | MsG0180006220.01 | 0.803727 | 3.036754e-49 | 1.537409e-46 |
| MsG0180005382.01 | MsG0180006220.01 | 0.817032 | 4.068899e-52 | 2.930522e-49 |
| MsG0180005424.01 | MsG0180006220.01 | 0.801932 | 7.131498e-49 | 3.448543e-46 |
| MsG0180005686.01 | MsG0180006220.01 | 0.873498 | 1.403347e-67 | 6.104528e-64 |
| MsG0180005927.01 | MsG0180006220.01 | 0.810769 | 9.774295e-51 | 5.944304e-48 |
| MsG0180005960.01 | MsG0180006220.01 | 0.807085 | 6.004028e-50 | 3.313490e-47 |
| MsG0180005990.01 | MsG0180006220.01 | 0.800420 | 1.453578e-48 | 6.765410e-46 |
| MsG0180006138.01 | MsG0180006220.01 | 0.809004 | 2.344429e-50 | 1.360549e-47 |
| MsG0180006144.01 | MsG0180006220.01 | 0.874708 | 5.467873e-68 | 2.486029e-64 |
| MsG0180006220.01 | MsG0280006411.01 | 0.839691 | 1.361635e-57 | 1.894926e-54 |
| MsG0180006220.01 | MsG0280006501.01 | 0.837890 | 3.978996e-57 | 5.241028e-54 |
| MsG0180006220.01 | MsG0280006708.01 | 0.813298 | 2.746937e-51 | 1.787020e-48 |
| MsG0180006220.01 | MsG0280007714.01 | 0.807881 | 4.069895e-50 | 2.293060e-47 |
| MsG0180006220.01 | MsG0280007848.01 | 0.813252 | 2.812794e-51 | 1.827468e-48 |
| MsG0180006220.01 | MsG0280009109.01 | 0.802457 | 5.560542e-49 | 2.725135e-46 |
| MsG0180006220.01 | MsG0280009395.01 | -0.814866 | 1.238504e-51 | 8.406442e-49 |
| MsG0180006220.01 | MsG0280010013.01 | 0.822786 | 1.965887e-53 | 1.661872e-50 |
| MsG0180006220.01 | MsG0280010204.01 | 0.859419 | 4.189451e-63 | 1.105794e-59 |
| MsG0180006220.01 | MsG0280011059.01 | -0.826628 | 2.443796e-54 | 2.304234e-51 |
| MsG0180006220.01 | MsG0280011175.01 | 0.818172 | 2.251484e-52 | 1.672981e-49 |
| MsG0180006220.01 | MsG0280011304.01 | 0.802826 | 4.664860e-49 | 2.308008e-46 |
| MsG0180006220.01 | MsG0280011371.01 | 0.802962 | 4.374113e-49 | 2.171404e-46 |
| MsG0180006220.01 | MsG0280011376.01 | 0.850813 | 1.332392e-60 | 2.642377e-57 |
| MsG0180006220.01 | MsG0380011895.01 | 0.872902 | 2.225301e-67 | 9.468921e-64 |
| MsG0180006220.01 | MsG0380012310.01 | 0.826612 | 2.465874e-54 | 2.323968e-51 |
| MsG0180006220.01 | MsG0380012661.01 | -0.822531 | 2.253590e-53 | 1.891355e-50 |
| MsG0180006220.01 | MsG0380013467.01 | 0.843123 | 1.699965e-58 | 2.633195e-55 |
| MsG0180006220.01 | MsG0380013541.01 | 0.850811 | 1.333756e-60 | 2.644930e-57 |
| MsG0180006220.01 | MsG0380013853.01 | 0.855180 | 7.499724e-62 | 1.716424e-58 |
| MsG0180006220.01 | MsG0380014727.01 | 0.801851 | 7.408669e-49 | 3.575340e-46 |
| MsG0180006220.01 | MsG0380014756.01 | 0.849891 | 2.415999e-60 | 4.648391e-57 |
| MsG0180006220.01 | MsG0380014770.01 | 0.844490 | 7.321244e-59 | 1.183944e-55 |
| MsG0180006220.01 | MsG0380015027.01 | 0.809084 | 2.253541e-50 | 1.310685e-47 |
| MsG0180006220.01 | MsG0380015216.01 | 0.800139 | 1.657962e-48 | 7.661650e-46 |
| MsG0180006220.01 | MsG0380015400.01 | 0.807711 | 4.423932e-50 | 2.481574e-47 |
| MsG0180006220.01 | MsG0380015533.01 | 0.834194 | 3.451408e-56 | 4.065513e-53 |
| MsG0180006220.01 | MsG0380015965.01 | 0.813030 | 3.146511e-51 | 2.032106e-48 |
| MsG0180006220.01 | MsG0380016004.01 | 0.840148 | 1.035187e-57 | 1.461461e-54 |
| MsG0180006220.01 | MsG0380016182.01 | 0.824553 | 7.581904e-54 | 6.738580e-51 |
| MsG0180006220.01 | MsG0380016191.01 | -0.823763 | 1.162624e-53 | 1.010409e-50 |
| MsG0180006220.01 | MsG0380016560.01 | 0.800023 | 1.750171e-48 | 8.063828e-46 |
| MsG0180006220.01 | MsG0380016828.01 | -0.840418 | 8.800610e-58 | 1.252834e-54 |
| MsG0180006220.01 | MsG0380017022.01 | 0.818270 | 2.139546e-52 | 1.594049e-49 |
| MsG0180006220.01 | MsG0380017023.01 | 0.880259 | 6.358725e-70 | 3.558007e-66 |
| MsG0180006220.01 | MsG0380017085.01 | 0.870928 | 1.006766e-66 | 3.986994e-63 |
| MsG0180006220.01 | MsG0380017126.01 | 0.857652 | 1.410271e-62 | 3.505940e-59 |
| MsG0180006220.01 | MsG0380017178.01 | -0.817855 | 2.655839e-52 | 1.956366e-49 |
| MsG0180006220.01 | MsG0380017198.01 | 0.829156 | 6.026557e-55 | 6.117255e-52 |
| MsG0180006220.01 | MsG0380017286.01 | 0.819311 | 1.241753e-52 | 9.521036e-50 |
| MsG0180006220.01 | MsG0380017680.01 | 0.858202 | 9.688458e-63 | 2.453157e-59 |
| MsG0180006220.01 | MsG0380017746.01 | 0.800267 | 1.561166e-48 | 7.237870e-46 |
| MsG0180006220.01 | MsG0380017891.01 | -0.810010 | 1.425802e-50 | 8.499035e-48 |
| MsG0180006220.01 | MsG0380017941.01 | 0.826799 | 2.224218e-54 | 2.107494e-51 |
| MsG0180006220.01 | MsG0380018052.01 | 0.811696 | 6.152635e-51 | 3.834321e-48 |
| MsG0180006220.01 | MsG0480018214.01 | 0.834879 | 2.321948e-56 | 2.792010e-53 |
| MsG0180006220.01 | MsG0480018473.01 | 0.814942 | 1.191524e-51 | 8.104197e-49 |
| MsG0180006220.01 | MsG0480018603.01 | 0.852742 | 3.780951e-61 | 7.978750e-58 |
| MsG0180006220.01 | MsG0480018606.01 | 0.818471 | 1.926982e-52 | 1.443810e-49 |
| MsG0180006220.01 | MsG0480018906.01 | 0.831414 | 1.692395e-55 | 1.835139e-52 |
| MsG0180006220.01 | MsG0480019126.01 | 0.857599 | 1.462968e-62 | 3.630771e-59 |
| MsG0180006220.01 | MsG0480019163.01 | -0.818019 | 2.439013e-52 | 1.804675e-49 |
| MsG0180006220.01 | MsG0480019795.01 | 0.804665 | 1.937487e-49 | 1.004827e-46 |
| MsG0180006220.01 | MsG0480020136.01 | 0.801849 | 7.415545e-49 | 3.578473e-46 |
| MsG0180006220.01 | MsG0480020429.01 | 0.801871 | 7.338405e-49 | 3.543323e-46 |
| MsG0180006220.01 | MsG0480020843.01 | 0.823895 | 1.082546e-53 | 9.442610e-51 |
| MsG0180006220.01 | MsG0480020874.01 | 0.822100 | 2.838292e-53 | 2.352695e-50 |
| MsG0180006220.01 | MsG0480021164.01 | 0.812331 | 4.474269e-51 | 2.836774e-48 |
| MsG0180006220.01 | MsG0480021246.01 | 0.814385 | 1.582744e-51 | 1.060534e-48 |
| MsG0180006220.01 | MsG0480021280.01 | 0.805937 | 1.048799e-49 | 5.620416e-47 |
| MsG0180006220.01 | MsG0480021776.01 | -0.818889 | 1.548758e-52 | 1.173896e-49 |
| MsG0180006220.01 | MsG0480021853.01 | 0.806568 | 7.724093e-50 | 4.206326e-47 |
| MsG0180006220.01 | MsG0480021959.01 | 0.826027 | 3.397171e-54 | 3.148937e-51 |
| MsG0180006220.01 | MsG0480021994.01 | 0.822493 | 2.299623e-53 | 1.927823e-50 |
| MsG0180006220.01 | MsG0480022035.01 | 0.806874 | 6.655841e-50 | 3.653261e-47 |
| MsG0180006220.01 | MsG0480022222.01 | 0.850585 | 1.544374e-60 | 3.039670e-57 |
| MsG0180006220.01 | MsG0480022493.01 | 0.801012 | 1.100485e-48 | 5.199679e-46 |
| MsG0180006220.01 | MsG0480022707.01 | 0.818569 | 1.830974e-52 | 1.375439e-49 |
| MsG0180006220.01 | MsG0480022768.01 | 0.834834 | 2.383794e-56 | 2.862655e-53 |
| MsG0180006220.01 | MsG0480023162.01 | 0.828853 | 7.136678e-55 | 7.178976e-52 |
| MsG0180006220.01 | MsG0480023174.01 | 0.815634 | 8.359207e-52 | 5.794744e-49 |
| MsG0180006220.01 | MsG0480023370.01 | 0.818668 | 1.738738e-52 | 1.309748e-49 |
| MsG0180006220.01 | MsG0480023448.01 | 0.821139 | 4.731257e-53 | 3.817424e-50 |
| MsG0180006220.01 | MsG0480023652.01 | 0.831379 | 1.725944e-55 | 1.869713e-52 |
| MsG0180006220.01 | MsG0480023660.01 | 0.807064 | 6.067007e-50 | 3.346468e-47 |
| MsG0180006220.01 | MsG0480023776.01 | 0.810304 | 1.232020e-50 | 7.399954e-48 |
| MsG0180006220.01 | MsG0480023814.01 | 0.819818 | 9.511819e-53 | 7.397810e-50 |
| MsG0180006220.01 | MsG0580024472.01 | 0.843174 | 1.648217e-58 | 2.557089e-55 |
| MsG0180006220.01 | MsG0580024495.01 | 0.848589 | 5.565393e-60 | 1.026320e-56 |
| MsG0180006220.01 | MsG0580025400.01 | 0.803823 | 2.900396e-49 | 1.472017e-46 |
| MsG0180006220.01 | MsG0580025412.01 | 0.810903 | 9.146381e-51 | 5.582429e-48 |
| MsG0180006220.01 | MsG0580025448.01 | 0.811346 | 7.331539e-51 | 4.526938e-48 |
| MsG0180006220.01 | MsG0580025826.01 | 0.831696 | 1.442090e-55 | 1.577041e-52 |
| MsG0180006220.01 | MsG0580025936.01 | 0.810846 | 9.409797e-51 | 5.734354e-48 |
| MsG0180006220.01 | MsG0580026301.01 | 0.800142 | 1.655816e-48 | 7.652167e-46 |
| MsG0180006220.01 | MsG0580026777.01 | 0.812959 | 3.259951e-51 | 2.101301e-48 |
| MsG0180006220.01 | MsG0580027034.01 | 0.861990 | 6.955768e-64 | 2.005191e-60 |
| MsG0180006220.01 | MsG0580027766.01 | 0.805453 | 1.325040e-49 | 7.013061e-47 |
| MsG0180006220.01 | MsG0580028418.01 | 0.810039 | 1.404920e-50 | 8.380966e-48 |
| MsG0180006220.01 | MsG0580028901.01 | 0.826796 | 2.228133e-54 | 2.111053e-51 |
| MsG0180006220.01 | MsG0580029014.01 | 0.817566 | 3.085081e-52 | 2.254604e-49 |
| MsG0180006220.01 | MsG0580029166.01 | 0.837934 | 3.877261e-57 | 5.114180e-54 |
| MsG0180006220.01 | MsG0580029256.01 | 0.818114 | 2.320488e-52 | 1.721516e-49 |
| MsG0180006220.01 | MsG0580029355.01 | 0.809080 | 2.257579e-50 | 1.312897e-47 |
| MsG0180006220.01 | MsG0580029429.01 | 0.802815 | 4.689747e-49 | 2.319587e-46 |
| MsG0180006220.01 | MsG0580029549.01 | 0.808934 | 2.426336e-50 | 1.405432e-47 |
| MsG0180006220.01 | MsG0580029717.01 | 0.846720 | 1.819326e-59 | 3.160317e-56 |
| MsG0180006220.01 | MsG0680030415.01 | 0.865126 | 7.402304e-65 | 2.381788e-61 |
| MsG0180006220.01 | MsG0680030555.01 | 0.801430 | 9.035898e-49 | 4.314388e-46 |
| MsG0180006220.01 | MsG0680030636.01 | 0.865471 | 5.765108e-65 | 1.877850e-61 |
| MsG0180006220.01 | MsG0680030992.01 | 0.810823 | 9.515459e-51 | 5.795171e-48 |
| MsG0180006220.01 | MsG0680031334.01 | 0.865061 | 7.760374e-65 | 2.491730e-61 |
| MsG0180006220.01 | MsG0680031646.01 | 0.804986 | 1.659993e-49 | 8.680885e-47 |
| MsG0180006220.01 | MsG0680031712.01 | 0.812338 | 4.457302e-51 | 2.826575e-48 |
| MsG0180006220.01 | MsG0680032058.01 | 0.814922 | 1.203951e-51 | 8.183989e-49 |
| MsG0180006220.01 | MsG0680032430.01 | 0.811078 | 8.381631e-51 | 5.139196e-48 |
| MsG0180006220.01 | MsG0680032641.01 | 0.803191 | 3.921796e-49 | 1.958347e-46 |
| MsG0180006220.01 | MsG0680034219.01 | 0.831126 | 1.992100e-55 | 2.141815e-52 |
| MsG0180006220.01 | MsG0680035659.01 | 0.831258 | 1.848324e-55 | 1.994906e-52 |
| MsG0180006220.01 | MsG0680035704.01 | 0.820965 | 5.188970e-53 | 4.166776e-50 |
| MsG0180006220.01 | MsG0780035957.01 | 0.850152 | 2.042065e-60 | 3.962833e-57 |
| MsG0180006220.01 | MsG0780036705.01 | 0.810990 | 8.754645e-51 | 5.356272e-48 |
| MsG0180006220.01 | MsG0780036964.01 | 0.808140 | 3.584271e-50 | 2.033453e-47 |
| MsG0180006220.01 | MsG0780037082.01 | 0.897898 | 8.989830e-77 | 1.037418e-72 |
| MsG0180006220.01 | MsG0780038833.01 | 0.812157 | 4.882432e-51 | 3.080978e-48 |
| MsG0180006220.01 | MsG0780038911.01 | 0.830623 | 2.645748e-55 | 2.802621e-52 |
| MsG0180006220.01 | MsG0780039143.01 | 0.803710 | 3.061516e-49 | 1.549195e-46 |
| MsG0180006220.01 | MsG0780039841.01 | 0.813163 | 2.940965e-51 | 1.906111e-48 |
| MsG0180006220.01 | MsG0780040148.01 | -0.820087 | 8.256608e-53 | 6.470345e-50 |
| MsG0180006220.01 | MsG0780040596.01 | 0.850656 | 1.475002e-60 | 2.909869e-57 |
| MsG0180006220.01 | MsG0780040858.01 | 0.836466 | 9.206356e-57 | 1.161203e-53 |
| MsG0180006220.01 | MsG0780041101.01 | 0.833085 | 6.529166e-56 | 7.440715e-53 |
| MsG0180006220.01 | MsG0780041137.01 | 0.816676 | 4.891236e-52 | 3.488387e-49 |
| MsG0180006220.01 | MsG0780041294.01 | 0.816337 | 5.824107e-52 | 4.115741e-49 |
| MsG0180006220.01 | MsG0780041441.01 | 0.821297 | 4.351339e-53 | 3.526157e-50 |
| MsG0180006220.01 | MsG0780041456.01 | 0.812060 | 5.126253e-51 | 3.226057e-48 |
| MsG0180006220.01 | MsG0780041507.01 | 0.873281 | 1.660406e-67 | 7.164963e-64 |
| MsG0180006220.01 | MsG0880042031.01 | 0.802249 | 6.137158e-49 | 2.991879e-46 |
| MsG0180006220.01 | MsG0880042134.01 | 0.835729 | 1.416471e-56 | 1.747321e-53 |
| MsG0180006220.01 | MsG0880042294.01 | 0.826366 | 2.822289e-54 | 2.641369e-51 |
| MsG0180006220.01 | MsG0880042314.01 | 0.804165 | 2.462705e-49 | 1.260890e-46 |
| MsG0180006220.01 | MsG0880042436.01 | 0.821249 | 4.463880e-53 | 3.612447e-50 |
| MsG0180006220.01 | MsG0880042611.01 | 0.822133 | 2.788614e-53 | 2.313833e-50 |
| MsG0180006220.01 | MsG0880042794.01 | 0.849335 | 3.453919e-60 | 6.526729e-57 |
| MsG0180006220.01 | MsG0880043303.01 | 0.825493 | 4.548485e-54 | 4.152290e-51 |
| MsG0180006220.01 | MsG0880043905.01 | 0.826608 | 2.471684e-54 | 2.329085e-51 |
| MsG0180006220.01 | MsG0880045605.01 | -0.809627 | 1.723529e-50 | 1.017105e-47 |
| MsG0180006220.01 | MsG0880045937.01 | 0.808287 | 3.335903e-50 | 1.899875e-47 |
| MsG0180006220.01 | MsG0880046058.01 | 0.804853 | 1.769563e-49 | 9.222747e-47 |
| MsG0180006220.01 | MsG0880046072.01 | 0.802319 | 5.934663e-49 | 2.898515e-46 |
| MsG0180006220.01 | MsG0880046126.01 | 0.831683 | 1.452438e-55 | 1.587750e-52 |
| MsG0180006220.01 | MsG0880046285.01 | 0.821652 | 3.603996e-53 | 2.949663e-50 |
| MsG0180006220.01 | MsG0880046377.01 | 0.841150 | 5.657426e-58 | 8.238208e-55 |
| MsG0180006220.01 | MsG0880046471.01 | 0.852101 | 5.758042e-61 | 1.190375e-57 |
| MsG0180006220.01 | MsG0880046536.01 | 0.852594 | 4.165854e-61 | 8.747980e-58 |
| MsG0180006220.01 | MsG0880046930.01 | 0.871230 | 8.008044e-67 | 3.206120e-63 |
| MsG0180006220.01 | MsG0880046963.01 | -0.809191 | 2.137617e-50 | 1.246848e-47 |
| MsG0180006220.01 | MsG0880047052.01 | 0.802455 | 5.564523e-49 | 2.727006e-46 |
| MsG0180006220.01 | MsG0880047116.01 | 0.813694 | 2.248782e-51 | 1.478780e-48 |
| MsG0180006220.01 | MsG0880047448.01 | 0.823225 | 1.553015e-53 | 1.329150e-50 |
| MsG0180006220.01 | MsG0880047763.01 | 0.821888 | 3.177920e-53 | 2.618544e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006220.01.T01 | MTR_1g116210 | 100.000 | 102 | 0 | 0 | 52 | 153 | 556 | 657 | 1.72e-68 | 219 |
| MsG0180006220.01.T01 | MTR_7g006030 | 89.216 | 102 | 11 | 0 | 52 | 153 | 479 | 580 | 4.55e-61 | 199 |
| MsG0180006220.01.T01 | MTR_1g007150 | 83.333 | 102 | 17 | 0 | 52 | 153 | 564 | 665 | 2.80e-56 | 187 |
| MsG0180006220.01.T01 | MTR_3g110240 | 78.431 | 102 | 22 | 0 | 52 | 153 | 561 | 662 | 3.38e-53 | 179 |
| MsG0180006220.01.T01 | MTR_7g085540 | 80.392 | 102 | 20 | 0 | 52 | 153 | 588 | 689 | 3.49e-53 | 179 |
| MsG0180006220.01.T01 | MTR_8g014050 | 61.069 | 131 | 44 | 1 | 23 | 153 | 549 | 672 | 6.51e-41 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006220.01.T01 | AT3G13670 | 83.333 | 102 | 17 | 0 | 52 | 153 | 583 | 684 | 1.13e-56 | 189 |
| MsG0180006220.01.T01 | AT3G03940 | 79.412 | 102 | 21 | 0 | 52 | 153 | 581 | 682 | 1.04e-53 | 181 |
| MsG0180006220.01.T01 | AT5G18190 | 76.471 | 102 | 24 | 0 | 52 | 153 | 571 | 672 | 2.15e-52 | 177 |
| MsG0180006220.01.T01 | AT5G18190 | 76.471 | 102 | 24 | 0 | 52 | 153 | 571 | 672 | 2.15e-52 | 177 |
| MsG0180006220.01.T01 | AT2G25760 | 76.471 | 102 | 24 | 0 | 52 | 153 | 553 | 654 | 8.92e-52 | 175 |
| MsG0180006220.01.T01 | AT2G25760 | 76.471 | 102 | 24 | 0 | 52 | 153 | 556 | 657 | 9.30e-52 | 175 |
| MsG0180006220.01.T01 | AT3G03930 | 68.627 | 102 | 32 | 0 | 52 | 153 | 168 | 269 | 3.48e-46 | 152 |
Find 42 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCATTATCCCAACGTTTA+TGG | 0.104765 | 1:-101533991 | None:intergenic |
| TTCTACATTACTTCTATTGC+AGG | 0.285204 | 1:+101532586 | MsG0180006220.01.T01:CDS |
| CACAACAGAGCTTCCATTAC+TGG | 0.311269 | 1:-101532611 | None:intergenic |
| CTTCTTGTTTATCCATTTGT+AGG | 0.313127 | 1:-101533765 | None:intergenic |
| ATCCATAAACGTTGGGATAA+TGG | 0.338559 | 1:+101533989 | MsG0180006220.01.T01:CDS |
| CATCACCAGGTCTGTTCCTC+GGG | 0.373424 | 1:-101534069 | None:intergenic |
| TTCTTCGCAGGAATGGATCT+TGG | 0.387340 | 1:+101532546 | MsG0180006220.01.T01:CDS |
| ATTTCCCAGCGCTCATGTTA+AGG | 0.404732 | 1:+101534120 | MsG0180006220.01.T01:CDS |
| AACGTTGGGATAATGGTTAT+AGG | 0.420827 | 1:+101533996 | MsG0180006220.01.T01:CDS |
| AGCGAATCTTTCCCTACAAA+TGG | 0.429454 | 1:+101533753 | MsG0180006220.01.T01:CDS |
| TCATCACCAGGTCTGTTCCT+CGG | 0.440307 | 1:-101534070 | None:intergenic |
| GTCACCTCAATGGGTACTGC+TGG | 0.441323 | 1:+101533806 | MsG0180006220.01.T01:CDS |
| TGGGTACTGCTGGAAATCGC+TGG | 0.454321 | 1:+101533816 | MsG0180006220.01.T01:CDS |
| CGTTTATGGATGCCTTCACT+TGG | 0.459779 | 1:-101533977 | None:intergenic |
| GGAATGGATCTTGGAACAAT+GGG | 0.467089 | 1:+101532555 | MsG0180006220.01.T01:CDS |
| TTCTTGTTTATCCATTTGTA+GGG | 0.473226 | 1:-101533764 | None:intergenic |
| CAACGCTGGATTCAGTGATC+AGG | 0.480740 | 1:+101533856 | MsG0180006220.01.T01:CDS |
| CCCTACCTTAACATGAGCGC+TGG | 0.483998 | 1:-101534125 | None:intergenic |
| TACAGCAACTGCAGCTACAT+TGG | 0.486190 | 1:+101534021 | MsG0180006220.01.T01:CDS |
| ATTTAATTTCTGCAGGTACA+AGG | 0.506190 | 1:+101533706 | MsG0180006220.01.T01:intron |
| ATACGACATTGTTTCTTCGC+AGG | 0.508838 | 1:+101532534 | MsG0180006220.01.T01:CDS |
| GGGTACTGCTGGAAATCGCT+GGG | 0.513888 | 1:+101533817 | MsG0180006220.01.T01:CDS |
| TGAAGGCATCCATAAACGTT+GGG | 0.514683 | 1:+101533982 | MsG0180006220.01.T01:CDS |
| GTTTCCTGAGTTTCATCACC+AGG | 0.525100 | 1:-101534082 | None:intergenic |
| TCTATTGCAGGGGCCAGTAA+TGG | 0.529630 | 1:+101532598 | MsG0180006220.01.T01:CDS |
| ATTGTTATGTCTCGCAACGC+TGG | 0.532120 | 1:+101533842 | MsG0180006220.01.T01:CDS |
| ACATTGTTTCTTCGCAGGAA+TGG | 0.533129 | 1:+101532539 | MsG0180006220.01.T01:CDS |
| TCTACATTACTTCTATTGCA+GGG | 0.533747 | 1:+101532587 | MsG0180006220.01.T01:CDS |
| ACAAATGGATAAACAAGAAG+TGG | 0.535275 | 1:+101533768 | MsG0180006220.01.T01:CDS |
| AGGAATGGATCTTGGAACAA+TGG | 0.539816 | 1:+101532554 | MsG0180006220.01.T01:CDS |
| ATAAACAAGAAGTGGAAAGA+AGG | 0.546623 | 1:+101533776 | MsG0180006220.01.T01:CDS |
| CCCAGCGCTCATGTTAAGGT+AGG | 0.554516 | 1:+101534124 | MsG0180006220.01.T01:CDS |
| CCAGCGCTCATGTTAAGGTA+GGG | 0.559623 | 1:+101534125 | MsG0180006220.01.T01:CDS |
| ATTTCCAGCAGTACCCATTG+AGG | 0.592136 | 1:-101533810 | None:intergenic |
| CTACATTACTTCTATTGCAG+GGG | 0.596116 | 1:+101532588 | MsG0180006220.01.T01:CDS |
| GTGAAGGCATCCATAAACGT+TGG | 0.598118 | 1:+101533981 | MsG0180006220.01.T01:CDS |
| CAGACCTGGTGATGAAACTC+AGG | 0.603132 | 1:+101534078 | MsG0180006220.01.T01:CDS |
| CCTACCTTAACATGAGCGCT+GGG | 0.608481 | 1:-101534124 | None:intergenic |
| CGCTTATATTAAGCATCCCG+AGG | 0.618789 | 1:+101534053 | MsG0180006220.01.T01:CDS |
| CAGTAATGGAAGCTCTGTTG+TGG | 0.630181 | 1:+101532612 | MsG0180006220.01.T01:CDS |
| AGCATCCCGAGGAACAGACC+TGG | 0.642592 | 1:+101534064 | MsG0180006220.01.T01:CDS |
| GGTACTGCTGGAAATCGCTG+GGG | 0.715640 | 1:+101533818 | MsG0180006220.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTCTTTATATTTAAAAAATA+TGG | - | Chr1:101533179-101533198 | None:intergenic | 10.0% |
| !! | GAAAAACAAAGAAAAATTAT+AGG | - | Chr1:101533514-101533533 | None:intergenic | 15.0% |
| !! | TGGTATAAATTTCTATTTAA+TGG | - | Chr1:101533078-101533097 | None:intergenic | 15.0% |
| !! | AAAGATTTAGCAAATATAAC+CGG | - | Chr1:101533014-101533033 | None:intergenic | 20.0% |
| !! | GAAAATAGAATACAAAACAA+CGG | - | Chr1:101533886-101533905 | None:intergenic | 20.0% |
| !! | GAAAATATTTCAATTTCTGA+AGG | + | Chr1:101533631-101533650 | MsG0180006220.01.T01:intron | 20.0% |
| !!! | AAAAAAAGTATTAACCTGAA+CGG | + | Chr1:101532904-101532923 | MsG0180006220.01.T01:intron | 20.0% |
| !!! | AACAATATTACTTTTTGCAA+CGG | + | Chr1:101532658-101532677 | MsG0180006220.01.T01:intron | 20.0% |
| !!! | TCTTTGATATTTTAAATGAC+TGG | + | Chr1:101533029-101533048 | MsG0180006220.01.T01:intron | 20.0% |
| !!! | TGATTTATGATAAAGCATTA+TGG | - | Chr1:101533442-101533461 | None:intergenic | 20.0% |
| !!! | TTTTTAATCTGAATTACCAT+AGG | + | Chr1:101533597-101533616 | MsG0180006220.01.T01:intron | 20.0% |
| ! | AAAGAAATTCTCCAAGATAT+TGG | - | Chr1:101532727-101532746 | None:intergenic | 25.0% |
| ! | AACCATCAAAAAAACTTAAG+AGG | - | Chr1:101533488-101533507 | None:intergenic | 25.0% |
| ! | ACAAATTAACATGCTAACAT+TGG | + | Chr1:101532870-101532889 | MsG0180006220.01.T01:intron | 25.0% |
| ! | ATATCTTGGAGAATTTCTTT+AGG | + | Chr1:101532727-101532746 | MsG0180006220.01.T01:intron | 25.0% |
| ! | TACAATGTTATCCAATATCT+TGG | + | Chr1:101532713-101532732 | MsG0180006220.01.T01:intron | 25.0% |
| ! | TTAAAAATCAGAAAAAGCCT+AGG | - | Chr1:101533584-101533603 | None:intergenic | 25.0% |
| ! | TTTGTTCATATTGAAACTCA+AGG | - | Chr1:101532855-101532874 | None:intergenic | 25.0% |
| !! | TATTTCCTCTGATTTTGTTA+GGG | + | Chr1:101533678-101533697 | MsG0180006220.01.T01:intron | 25.0% |
| !! | TTCTTGTTTATCCATTTGTA+GGG | - | Chr1:101533767-101533786 | None:intergenic | 25.0% |
| !! | TTTTCTTCAAACAAAACCTA+TGG | - | Chr1:101533616-101533635 | None:intergenic | 25.0% |
| !!! | ACAATATTACTTTTTGCAAC+GGG | + | Chr1:101532659-101532678 | MsG0180006220.01.T01:intron | 25.0% |
| !!! | ATTGACTTTGTTGATTTTTC+TGG | + | Chr1:101532684-101532703 | MsG0180006220.01.T01:intron | 25.0% |
| AAAAGCAAGAATACATGCTA+TGG | - | Chr1:101532769-101532788 | None:intergenic | 30.0% | |
| AAAGCAAGAATACATGCTAT+GGG | - | Chr1:101532768-101532787 | None:intergenic | 30.0% | |
| ACAAATGGATAAACAAGAAG+TGG | + | Chr1:101533768-101533787 | MsG0180006220.01.T01:CDS | 30.0% | |
| ATAAACAAGAAGTGGAAAGA+AGG | + | Chr1:101533776-101533795 | MsG0180006220.01.T01:CDS | 30.0% | |
| CTACATTTACAAGGTTAGTA+AGG | - | Chr1:101533933-101533952 | None:intergenic | 30.0% | |
| CTTACTAACCTTGTAAATGT+AGG | + | Chr1:101533931-101533950 | MsG0180006220.01.T01:intron | 30.0% | |
| TCTACATTACTTCTATTGCA+GGG | + | Chr1:101532587-101532606 | MsG0180006220.01.T01:CDS | 30.0% | |
| TTCTACATTACTTCTATTGC+AGG | + | Chr1:101532586-101532605 | MsG0180006220.01.T01:CDS | 30.0% | |
| ! | ATAGCATGTATTCTTGCTTT+TGG | + | Chr1:101532768-101532787 | MsG0180006220.01.T01:intron | 30.0% |
| ! | ATTTAATTTCTGCAGGTACA+AGG | + | Chr1:101533706-101533725 | MsG0180006220.01.T01:intron | 30.0% |
| ! | CCCTTCTAAAAAATAGATTG+CGG | + | Chr1:101533052-101533071 | MsG0180006220.01.T01:intron | 30.0% |
| ! | CTATTTCCTCTGATTTTGTT+AGG | + | Chr1:101533677-101533696 | MsG0180006220.01.T01:intron | 30.0% |
| ! | CTTCTTGTTTATCCATTTGT+AGG | - | Chr1:101533768-101533787 | None:intergenic | 30.0% |
| !! | TAGCATGTATTCTTGCTTTT+GGG | + | Chr1:101532769-101532788 | MsG0180006220.01.T01:intron | 30.0% |
| !! | TCTTTTGTTTGACAGACTTA+AGG | + | Chr1:101532818-101532837 | MsG0180006220.01.T01:intron | 30.0% |
| !!! | AGCCTCTTAAGTTTTTTTGA+TGG | + | Chr1:101533483-101533502 | MsG0180006220.01.T01:intron | 30.0% |
| !!! | ATGAGCGAAACTCTTTTTTA+TGG | - | Chr1:101533098-101533117 | None:intergenic | 30.0% |
| !!! | CAATATTACTTTTTGCAACG+GGG | + | Chr1:101532660-101532679 | MsG0180006220.01.T01:intron | 30.0% |
| !!! | CCGCAATCTATTTTTTAGAA+GGG | - | Chr1:101533055-101533074 | None:intergenic | 30.0% |
| !!! | GGTTTTGATTTAATTTCTGC+AGG | + | Chr1:101533699-101533718 | MsG0180006220.01.T01:intron | 30.0% |
| AAATATAACCGGAAGAGTAG+TGG | - | Chr1:101533003-101533022 | None:intergenic | 35.0% | |
| AACCATTATCCCAACGTTTA+TGG | - | Chr1:101533994-101534013 | None:intergenic | 35.0% | |
| AAGGTTAGTAAGGACAGAAA+GGG | - | Chr1:101533923-101533942 | None:intergenic | 35.0% | |
| AATATAACCGGAAGAGTAGT+GGG | - | Chr1:101533002-101533021 | None:intergenic | 35.0% | |
| ACTAACCTTGTAAATGTAGG+TGG | + | Chr1:101533934-101533953 | MsG0180006220.01.T01:intron | 35.0% | |
| ATCCATAAACGTTGGGATAA+TGG | + | Chr1:101533989-101534008 | MsG0180006220.01.T01:CDS | 35.0% | |
| CAAAACCCTAACAAAATCAG+AGG | - | Chr1:101533686-101533705 | None:intergenic | 35.0% | |
| CAAAATCAGAGGAAATAGCT+TGG | - | Chr1:101533675-101533694 | None:intergenic | 35.0% | |
| CTACATTACTTCTATTGCAG+GGG | + | Chr1:101532588-101532607 | MsG0180006220.01.T01:CDS | 35.0% | |
| CTGTCACACAATCAATAGAA+AGG | - | Chr1:101533560-101533579 | None:intergenic | 35.0% | |
| CTTGGAATCATCATACAACA+GGG | - | Chr1:101533657-101533676 | None:intergenic | 35.0% | |
| ! | AACGTTGGGATAATGGTTAT+AGG | + | Chr1:101533996-101534015 | MsG0180006220.01.T01:CDS | 35.0% |
| ! | GATTTTCTCTATCCAAGTGA+AGG | + | Chr1:101533965-101533984 | MsG0180006220.01.T01:CDS | 35.0% |
| !! | TGTATTCTTGCTTTTGGGAA+TGG | + | Chr1:101532774-101532793 | MsG0180006220.01.T01:intron | 35.0% |
| !! | TTTTGGGAATGGATGGTTTT+TGG | + | Chr1:101532785-101532804 | MsG0180006220.01.T01:intron | 35.0% |
| !!! | GCCGCAATCTATTTTTTAGA+AGG | - | Chr1:101533056-101533075 | None:intergenic | 35.0% |
| AAAAACTTAAGAGGCTGCCA+AGG | - | Chr1:101533479-101533498 | None:intergenic | 40.0% | |
| AAAACTTAAGAGGCTGCCAA+GGG | - | Chr1:101533478-101533497 | None:intergenic | 40.0% | |
| AACCTTGTAAATGTAGGTGG+TGG | + | Chr1:101533937-101533956 | MsG0180006220.01.T01:intron | 40.0% | |
| AGCGAATCTTTCCCTACAAA+TGG | + | Chr1:101533753-101533772 | MsG0180006220.01.T01:CDS | 40.0% | |
| AGGAATGGATCTTGGAACAA+TGG | + | Chr1:101532554-101532573 | MsG0180006220.01.T01:CDS | 40.0% | |
| ATATAACCGGAAGAGTAGTG+GGG | - | Chr1:101533001-101533020 | None:intergenic | 40.0% | |
| ATTGATTGTGTGACAGTCCT+AGG | + | Chr1:101533564-101533583 | MsG0180006220.01.T01:intron | 40.0% | |
| CAAGGTTAGTAAGGACAGAA+AGG | - | Chr1:101533924-101533943 | None:intergenic | 40.0% | |
| GCTTGGAATCATCATACAAC+AGG | - | Chr1:101533658-101533677 | None:intergenic | 40.0% | |
| GGAATGGATCTTGGAACAAT+GGG | + | Chr1:101532555-101532574 | MsG0180006220.01.T01:CDS | 40.0% | |
| TTCCACCACCTACATTTACA+AGG | - | Chr1:101533942-101533961 | None:intergenic | 40.0% | |
| ! | ACATTGTTTCTTCGCAGGAA+TGG | + | Chr1:101532539-101532558 | MsG0180006220.01.T01:CDS | 40.0% |
| ! | AGGTTTTCATGTCACCTCAA+TGG | + | Chr1:101533796-101533815 | MsG0180006220.01.T01:CDS | 40.0% |
| ! | ATACGACATTGTTTCTTCGC+AGG | + | Chr1:101532534-101532553 | MsG0180006220.01.T01:CDS | 40.0% |
| ! | CAACCAAGTCTTATCACACT+AGG | + | Chr1:101532936-101532955 | MsG0180006220.01.T01:intron | 40.0% |
| ! | GGTTTTCATGTCACCTCAAT+GGG | + | Chr1:101533797-101533816 | MsG0180006220.01.T01:CDS | 40.0% |
| ! | GTGATAAGACTTGGTTGTAG+TGG | - | Chr1:101532933-101532952 | None:intergenic | 40.0% |
| ! | TCTGTTGTGGTGATGTCAAA+AGG | + | Chr1:101532625-101532644 | MsG0180006220.01.T01:intron | 40.0% |
| !! | GGGTTGGCTTAATAGATCAA+AGG | + | Chr1:101533413-101533432 | MsG0180006220.01.T01:intron | 40.0% |
| !! | TGAAGGCATCCATAAACGTT+GGG | + | Chr1:101533982-101534001 | MsG0180006220.01.T01:CDS | 40.0% |
| !! | TTCTTGCTTTTGGGAATGGA+TGG | + | Chr1:101532778-101532797 | MsG0180006220.01.T01:intron | 40.0% |
| ATTGTTATGTCTCGCAACGC+TGG | + | Chr1:101533842-101533861 | MsG0180006220.01.T01:CDS | 45.0% | |
| ATTTCCAGCAGTACCCATTG+AGG | - | Chr1:101533813-101533832 | None:intergenic | 45.0% | |
| ATTTCCCAGCGCTCATGTTA+AGG | + | Chr1:101534120-101534139 | MsG0180006220.01.T01:CDS | 45.0% | |
| CACAACAGAGCTTCCATTAC+TGG | - | Chr1:101532614-101532633 | None:intergenic | 45.0% | |
| CGCTTATATTAAGCATCCCG+AGG | + | Chr1:101534053-101534072 | MsG0180006220.01.T01:CDS | 45.0% | |
| CGTTTATGGATGCCTTCACT+TGG | - | Chr1:101533980-101533999 | None:intergenic | 45.0% | |
| CTGCCTAGTGTGATAAGACT+TGG | - | Chr1:101532942-101532961 | None:intergenic | 45.0% | |
| GACAGAAAGGGAAACTACAG+TGG | - | Chr1:101533911-101533930 | None:intergenic | 45.0% | |
| GATCCAGAAATGGTGACTTG+CGG | - | Chr1:101533375-101533394 | None:intergenic | 45.0% | |
| GTTTCCTGAGTTTCATCACC+AGG | - | Chr1:101534085-101534104 | None:intergenic | 45.0% | |
| TACAGCAACTGCAGCTACAT+TGG | + | Chr1:101534021-101534040 | MsG0180006220.01.T01:CDS | 45.0% | |
| TATAACCGGAAGAGTAGTGG+GGG | - | Chr1:101533000-101533019 | None:intergenic | 45.0% | |
| TCATATCTCTAGCCAACCCT+TGG | + | Chr1:101533459-101533478 | MsG0180006220.01.T01:intron | 45.0% | |
| TTCTTCGCAGGAATGGATCT+TGG | + | Chr1:101532546-101532565 | MsG0180006220.01.T01:CDS | 45.0% | |
| ! | ATCCAGAAATGGTGACTTGC+GGG | - | Chr1:101533374-101533393 | None:intergenic | 45.0% |
| ! | CAGTAATGGAAGCTCTGTTG+TGG | + | Chr1:101532612-101532631 | MsG0180006220.01.T01:CDS | 45.0% |
| !! | GTGAAGGCATCCATAAACGT+TGG | + | Chr1:101533981-101534000 | MsG0180006220.01.T01:CDS | 45.0% |
| !!! | TCTTTGTTTTTCCCTCCCTC+TGG | + | Chr1:101533522-101533541 | MsG0180006220.01.T01:intron | 45.0% |
| !!! | TAATTTTTCTAATATATAAT+AGG | + | Chr1:101533240-101533259 | MsG0180006220.01.T01:intron | 5.0% |
| AACCACTCTACCTAGATCCG+TGG | - | Chr1:101532965-101532984 | None:intergenic | 50.0% | |
| ACCCTACCTAGTGTCAGTGA+CGG | - | Chr1:101533397-101533416 | None:intergenic | 50.0% | |
| ACGGATCTAGGTAGAGTGGT+TGG | + | Chr1:101532964-101532983 | MsG0180006220.01.T01:intron | 50.0% | |
| ATCCGTCACTGACACTAGGT+AGG | + | Chr1:101533392-101533411 | MsG0180006220.01.T01:intron | 50.0% | |
| ATCTAGGTAGAGTGGTTGGG+GGG | + | Chr1:101532968-101532987 | MsG0180006220.01.T01:intron | 50.0% | |
| CAACGCTGGATTCAGTGATC+AGG | + | Chr1:101533856-101533875 | MsG0180006220.01.T01:CDS | 50.0% | |
| CCAGCGCTCATGTTAAGGTA+GGG | + | Chr1:101534125-101534144 | MsG0180006220.01.T01:CDS | 50.0% | |
| CCTACCTTAACATGAGCGCT+GGG | - | Chr1:101534127-101534146 | None:intergenic | 50.0% | |
| CGGATCTAGGTAGAGTGGTT+GGG | + | Chr1:101532965-101532984 | MsG0180006220.01.T01:intron | 50.0% | |
| CTTATCACACTAGGCAGCCA+CGG | + | Chr1:101532945-101532964 | MsG0180006220.01.T01:intron | 50.0% | |
| GATCTAGGTAGAGTGGTTGG+GGG | + | Chr1:101532967-101532986 | MsG0180006220.01.T01:intron | 50.0% | |
| GGATCTAGGTAGAGTGGTTG+GGG | + | Chr1:101532966-101532985 | MsG0180006220.01.T01:intron | 50.0% | |
| TCACTGACACTAGGTAGGGT+TGG | + | Chr1:101533397-101533416 | MsG0180006220.01.T01:intron | 50.0% | |
| TCATCACCAGGTCTGTTCCT+CGG | - | Chr1:101534073-101534092 | None:intergenic | 50.0% | |
| TCCGTCACTGACACTAGGTA+GGG | + | Chr1:101533393-101533412 | MsG0180006220.01.T01:intron | 50.0% | |
| TCTATTGCAGGGGCCAGTAA+TGG | + | Chr1:101532598-101532617 | MsG0180006220.01.T01:CDS | 50.0% | |
| ! | CAGACCTGGTGATGAAACTC+AGG | + | Chr1:101534078-101534097 | MsG0180006220.01.T01:CDS | 50.0% |
| ! | TCCAGAAATGGTGACTTGCG+GGG | - | Chr1:101533373-101533392 | None:intergenic | 50.0% |
| !! | GTCAGTGACGGATCCAGAAA+TGG | - | Chr1:101533385-101533404 | None:intergenic | 50.0% |
| AACTGCCCCCACTACTCTTC+CGG | + | Chr1:101532992-101533011 | MsG0180006220.01.T01:intron | 55.0% | |
| AAGGAAGCTGTACACGCCAG+AGG | - | Chr1:101533541-101533560 | None:intergenic | 55.0% | |
| AGCCACGGATCTAGGTAGAG+TGG | + | Chr1:101532960-101532979 | MsG0180006220.01.T01:intron | 55.0% | |
| AGGAAGCTGTACACGCCAGA+GGG | - | Chr1:101533540-101533559 | None:intergenic | 55.0% | |
| CATCACCAGGTCTGTTCCTC+GGG | - | Chr1:101534072-101534091 | None:intergenic | 55.0% | |
| CCCAGCGCTCATGTTAAGGT+AGG | + | Chr1:101534124-101534143 | MsG0180006220.01.T01:CDS | 55.0% | |
| CCCTACCTTAACATGAGCGC+TGG | - | Chr1:101534128-101534147 | None:intergenic | 55.0% | |
| CTGGATCCGTCACTGACACT+AGG | + | Chr1:101533388-101533407 | MsG0180006220.01.T01:intron | 55.0% | |
| CTTAAGAGGCTGCCAAGGGT+TGG | - | Chr1:101533474-101533493 | None:intergenic | 55.0% | |
| GGTACTGCTGGAAATCGCTG+GGG | + | Chr1:101533818-101533837 | MsG0180006220.01.T01:CDS | 55.0% | |
| GGTTGTAGTGGCAACCGTTC+AGG | - | Chr1:101532921-101532940 | None:intergenic | 55.0% | |
| ! | CCAGAAATGGTGACTTGCGG+GGG | - | Chr1:101533372-101533391 | None:intergenic | 55.0% |
| ! | GGGTACTGCTGGAAATCGCT+GGG | + | Chr1:101533817-101533836 | MsG0180006220.01.T01:CDS | 55.0% |
| ! | GTCACCTCAATGGGTACTGC+TGG | + | Chr1:101533806-101533825 | MsG0180006220.01.T01:CDS | 55.0% |
| ! | TGGGTACTGCTGGAAATCGC+TGG | + | Chr1:101533816-101533835 | MsG0180006220.01.T01:CDS | 55.0% |
| AAGCTGTACACGCCAGAGGG+AGG | - | Chr1:101533537-101533556 | None:intergenic | 60.0% | |
| AGCATCCCGAGGAACAGACC+TGG | + | Chr1:101534064-101534083 | MsG0180006220.01.T01:CDS | 60.0% | |
| AGCTGTACACGCCAGAGGGA+GGG | - | Chr1:101533536-101533555 | None:intergenic | 60.0% | |
| CACTAGGCAGCCACGGATCT+AGG | + | Chr1:101532952-101532971 | MsG0180006220.01.T01:intron | 60.0% | |
| CCCCCGCAAGTCACCATTTC+TGG | + | Chr1:101533369-101533388 | MsG0180006220.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 101532521 | 101534186 | 101532521 | ID=MsG0180006220.01;Name=MsG0180006220.01 |
| Chr1 | mRNA | 101532521 | 101534186 | 101532521 | ID=MsG0180006220.01.T01;Parent=MsG0180006220.01;Name=MsG0180006220.01.T01;_AED=0.50;_eAED=0.65;_QI=0|0.5|0.33|1|1|1|3|0|167 |
| Chr1 | exon | 101532521 | 101532633 | 101532521 | ID=MsG0180006220.01.T01:exon:15048;Parent=MsG0180006220.01.T01 |
| Chr1 | exon | 101533721 | 101533877 | 101533721 | ID=MsG0180006220.01.T01:exon:15049;Parent=MsG0180006220.01.T01 |
| Chr1 | exon | 101533953 | 101534186 | 101533953 | ID=MsG0180006220.01.T01:exon:15050;Parent=MsG0180006220.01.T01 |
| Chr1 | CDS | 101532521 | 101532633 | 101532521 | ID=MsG0180006220.01.T01:cds;Parent=MsG0180006220.01.T01 |
| Chr1 | CDS | 101533721 | 101533877 | 101533721 | ID=MsG0180006220.01.T01:cds;Parent=MsG0180006220.01.T01 |
| Chr1 | CDS | 101533953 | 101534186 | 101533953 | ID=MsG0180006220.01.T01:cds;Parent=MsG0180006220.01.T01 |
| Gene Sequence |
| Protein sequence |
