Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010204.01.T01 | XP_024630146.1 | 98.611 | 144 | 2 | 0 | 1 | 144 | 1 | 144 | 6.70E-99 | 290 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010204.01.T01 | B7FGY4 | 98.611 | 144 | 2 | 0 | 1 | 144 | 1 | 144 | 3.20e-99 | 290 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047959.01 | MsG0280010204.01 | 0.800589 | 1.342844e-48 | 6.276624e-46 |
| MsG0080048982.01 | MsG0280010204.01 | 0.811859 | 5.670376e-51 | 3.549209e-48 |
| MsG0180000152.01 | MsG0280010204.01 | 0.824336 | 8.531926e-54 | 7.534616e-51 |
| MsG0180000157.01 | MsG0280010204.01 | 0.800158 | 1.642993e-48 | 7.595813e-46 |
| MsG0180000271.01 | MsG0280010204.01 | 0.830309 | 3.157808e-55 | 3.314489e-52 |
| MsG0180000284.01 | MsG0280010204.01 | 0.826348 | 2.850227e-54 | 2.666220e-51 |
| MsG0180000546.01 | MsG0280010204.01 | 0.853716 | 1.988692e-61 | 4.336789e-58 |
| MsG0180000550.01 | MsG0280010204.01 | 0.825346 | 4.927874e-54 | 4.479923e-51 |
| MsG0180000669.01 | MsG0280010204.01 | 0.838626 | 2.572048e-57 | 3.464998e-54 |
| MsG0180000673.01 | MsG0280010204.01 | 0.843685 | 1.203529e-58 | 1.897806e-55 |
| MsG0180000679.01 | MsG0280010204.01 | 0.855697 | 5.303054e-62 | 1.234915e-58 |
| MsG0180001149.01 | MsG0280010204.01 | 0.817553 | 3.106654e-52 | 2.269565e-49 |
| MsG0180001522.01 | MsG0280010204.01 | 0.822806 | 1.945091e-53 | 1.645169e-50 |
| MsG0180001663.01 | MsG0280010204.01 | 0.827785 | 1.291082e-54 | 1.258996e-51 |
| MsG0180001712.01 | MsG0280010204.01 | 0.842519 | 2.461704e-58 | 3.742016e-55 |
| MsG0180001795.01 | MsG0280010204.01 | 0.831164 | 1.949689e-55 | 2.098532e-52 |
| MsG0180002140.01 | MsG0280010204.01 | 0.838522 | 2.735902e-57 | 3.673769e-54 |
| MsG0180002482.01 | MsG0280010204.01 | 0.821346 | 4.239463e-53 | 3.440258e-50 |
| MsG0180002750.01 | MsG0280010204.01 | -0.817137 | 3.854976e-52 | 2.784332e-49 |
| MsG0180003088.01 | MsG0280010204.01 | 0.827794 | 1.285126e-54 | 1.253458e-51 |
| MsG0180003124.01 | MsG0280010204.01 | 0.805962 | 1.035996e-49 | 5.555440e-47 |
| MsG0180003128.01 | MsG0280010204.01 | 0.804229 | 2.387387e-49 | 1.224306e-46 |
| MsG0180003952.01 | MsG0280010204.01 | 0.839445 | 1.578144e-57 | 2.179939e-54 |
| MsG0180004599.01 | MsG0280010204.01 | 0.802998 | 4.299901e-49 | 2.136428e-46 |
| MsG0180004600.01 | MsG0280010204.01 | 0.804596 | 2.002818e-49 | 1.036851e-46 |
| MsG0180004886.01 | MsG0280010204.01 | -0.837925 | 3.899019e-57 | 5.141174e-54 |
| MsG0180005160.01 | MsG0280010204.01 | 0.809293 | 2.032665e-50 | 1.188859e-47 |
| MsG0180005193.01 | MsG0280010204.01 | 0.813389 | 2.624292e-51 | 1.711547e-48 |
| MsG0180005270.01 | MsG0280010204.01 | 0.837199 | 5.983896e-57 | 7.715742e-54 |
| MsG0180005350.01 | MsG0280010204.01 | 0.800155 | 1.645383e-48 | 7.606285e-46 |
| MsG0180005371.01 | MsG0280010204.01 | 0.817404 | 3.356681e-52 | 2.442251e-49 |
| MsG0180005446.01 | MsG0280010204.01 | 0.827256 | 1.729750e-54 | 1.661166e-51 |
| MsG0180005676.01 | MsG0280010204.01 | -0.831716 | 1.425836e-55 | 1.560293e-52 |
| MsG0180005686.01 | MsG0280010204.01 | 0.801869 | 7.346340e-49 | 3.546963e-46 |
| MsG0180005872.01 | MsG0280010204.01 | 0.806602 | 7.594943e-50 | 4.139605e-47 |
| MsG0180005881.01 | MsG0280010204.01 | -0.812692 | 3.730771e-51 | 2.388070e-48 |
| MsG0180006138.01 | MsG0280010204.01 | 0.801547 | 8.554341e-49 | 4.096364e-46 |
| MsG0180006144.01 | MsG0280010204.01 | 0.843605 | 1.264360e-58 | 1.988719e-55 |
| MsG0180006220.01 | MsG0280010204.01 | 0.859419 | 4.189451e-63 | 1.105794e-59 |
| MsG0280006406.01 | MsG0280010204.01 | 0.807395 | 5.162254e-50 | 2.872107e-47 |
| MsG0280006411.01 | MsG0280010204.01 | 0.848178 | 7.231030e-60 | 1.315778e-56 |
| MsG0280006708.01 | MsG0280010204.01 | 0.820987 | 5.129610e-53 | 4.121616e-50 |
| MsG0280007714.01 | MsG0280010204.01 | 0.823584 | 1.280356e-53 | 1.107004e-50 |
| MsG0280008971.01 | MsG0280010204.01 | 0.800876 | 1.173135e-48 | 5.523806e-46 |
| MsG0280009395.01 | MsG0280010204.01 | -0.804579 | 2.018625e-49 | 1.044600e-46 |
| MsG0280010013.01 | MsG0280010204.01 | 0.803305 | 3.713988e-49 | 1.859935e-46 |
| MsG0280010204.01 | MsG0280010423.01 | -0.817280 | 3.578364e-52 | 2.594588e-49 |
| MsG0280010204.01 | MsG0280011059.01 | -0.838779 | 2.347829e-57 | 3.177550e-54 |
| MsG0280010204.01 | MsG0280011235.01 | 0.800556 | 1.363774e-48 | 6.369072e-46 |
| MsG0280010204.01 | MsG0280011376.01 | 0.823219 | 1.557979e-53 | 1.333188e-50 |
| MsG0280010204.01 | MsG0280011446.01 | 0.804838 | 1.782805e-49 | 9.288122e-47 |
| MsG0280010204.01 | MsG0380011895.01 | 0.867018 | 1.864188e-65 | 6.411584e-62 |
| MsG0280010204.01 | MsG0380012050.01 | 0.833994 | 3.872071e-56 | 4.534460e-53 |
| MsG0280010204.01 | MsG0380012310.01 | 0.822725 | 2.031894e-53 | 1.714654e-50 |
| MsG0280010204.01 | MsG0380012661.01 | -0.834538 | 2.828246e-56 | 3.366672e-53 |
| MsG0280010204.01 | MsG0380013541.01 | 0.814931 | 1.198139e-51 | 8.146645e-49 |
| MsG0280010204.01 | MsG0380013853.01 | 0.838760 | 2.373925e-57 | 3.211105e-54 |
| MsG0280010204.01 | MsG0380014551.01 | -0.825728 | 4.001003e-54 | 3.677141e-51 |
| MsG0280010204.01 | MsG0380014770.01 | 0.868420 | 6.615960e-66 | 2.391293e-62 |
| MsG0280010204.01 | MsG0380015166.01 | 0.807568 | 4.742776e-50 | 2.650526e-47 |
| MsG0280010204.01 | MsG0380015212.01 | -0.808736 | 2.674631e-50 | 1.541139e-47 |
| MsG0280010204.01 | MsG0380015400.01 | 0.828426 | 9.049180e-55 | 8.991744e-52 |
| MsG0280010204.01 | MsG0380016004.01 | 0.801736 | 7.821025e-49 | 3.763153e-46 |
| MsG0280010204.01 | MsG0380016182.01 | 0.824556 | 7.571974e-54 | 6.730141e-51 |
| MsG0280010204.01 | MsG0380016191.01 | -0.820805 | 5.648043e-53 | 4.514993e-50 |
| MsG0280010204.01 | MsG0380016581.01 | 0.806906 | 6.551807e-50 | 3.599138e-47 |
| MsG0280010204.01 | MsG0380016828.01 | -0.851116 | 1.094239e-60 | 2.191713e-57 |
| MsG0280010204.01 | MsG0380017023.01 | 0.835451 | 1.665242e-56 | 2.037143e-53 |
| MsG0280010204.01 | MsG0380017126.01 | 0.811663 | 6.256638e-51 | 3.895682e-48 |
| MsG0280010204.01 | MsG0380017178.01 | -0.817912 | 2.577366e-52 | 1.901511e-49 |
| MsG0280010204.01 | MsG0380017226.01 | 0.843528 | 1.326099e-58 | 2.080593e-55 |
| MsG0280010204.01 | MsG0380017263.01 | -0.808765 | 2.637371e-50 | 1.520857e-47 |
| MsG0280010204.01 | MsG0380017265.01 | -0.802363 | 5.812010e-49 | 2.841761e-46 |
| MsG0280010204.01 | MsG0380017286.01 | 0.835678 | 1.459383e-56 | 1.797514e-53 |
| MsG0280010204.01 | MsG0380017551.01 | -0.810836 | 9.455158e-51 | 5.760531e-48 |
| MsG0280010204.01 | MsG0380017680.01 | 0.811679 | 6.205249e-51 | 3.865320e-48 |
| MsG0280010204.01 | MsG0380017888.01 | 0.807086 | 6.001137e-50 | 3.311973e-47 |
| MsG0280010204.01 | MsG0480018603.01 | 0.821547 | 3.810017e-53 | 3.109179e-50 |
| MsG0280010204.01 | MsG0480018906.01 | 0.861690 | 8.595813e-64 | 2.452346e-60 |
| MsG0280010204.01 | MsG0480019163.01 | -0.804372 | 2.229658e-49 | 1.147677e-46 |
| MsG0280010204.01 | MsG0480019434.01 | 0.800401 | 1.466773e-48 | 6.823262e-46 |
| MsG0280010204.01 | MsG0480020085.01 | 0.820576 | 6.376630e-53 | 5.064606e-50 |
| MsG0280010204.01 | MsG0480020327.01 | -0.824582 | 7.466741e-54 | 6.641731e-51 |
| MsG0280010204.01 | MsG0480020843.01 | 0.852439 | 4.614480e-61 | 9.642612e-58 |
| MsG0280010204.01 | MsG0480021246.01 | 0.831566 | 1.552637e-55 | 1.691390e-52 |
| MsG0280010204.01 | MsG0480021280.01 | 0.814379 | 1.587330e-51 | 1.063427e-48 |
| MsG0280010204.01 | MsG0480021776.01 | -0.813954 | 1.970177e-51 | 1.304725e-48 |
| MsG0280010204.01 | MsG0480021959.01 | 0.820368 | 7.116461e-53 | 5.620125e-50 |
| MsG0280010204.01 | MsG0480021994.01 | 0.818115 | 2.320107e-52 | 1.721263e-49 |
| MsG0280010204.01 | MsG0480022035.01 | 0.802698 | 4.958806e-49 | 2.445265e-46 |
| MsG0280010204.01 | MsG0480022052.01 | -0.808699 | 2.724273e-50 | 1.568254e-47 |
| MsG0280010204.01 | MsG0480022222.01 | 0.811984 | 5.325220e-51 | 3.344454e-48 |
| MsG0280010204.01 | MsG0480022246.01 | 0.809615 | 1.733458e-50 | 1.022660e-47 |
| MsG0280010204.01 | MsG0580025328.01 | 0.802784 | 4.759631e-49 | 2.352241e-46 |
| MsG0280010204.01 | MsG0580025448.01 | 0.817261 | 3.613905e-52 | 2.618995e-49 |
| MsG0280010204.01 | MsG0580025638.01 | 0.801484 | 8.809629e-49 | 4.212087e-46 |
| MsG0280010204.01 | MsG0580027034.01 | 0.837460 | 5.129990e-57 | 6.668455e-54 |
| MsG0280010204.01 | MsG0580027401.01 | 0.806482 | 8.051166e-50 | 4.374912e-47 |
| MsG0280010204.01 | MsG0580028289.01 | 0.810258 | 1.260518e-50 | 7.562360e-48 |
| MsG0280010204.01 | MsG0580028901.01 | 0.801473 | 8.855204e-49 | 4.232741e-46 |
| MsG0280010204.01 | MsG0580029952.01 | 0.803184 | 3.934148e-49 | 1.964169e-46 |
| MsG0280010204.01 | MsG0580029999.01 | -0.804704 | 1.901146e-49 | 9.870018e-47 |
| MsG0280010204.01 | MsG0680030316.01 | 0.824363 | 8.405331e-54 | 7.429034e-51 |
| MsG0280010204.01 | MsG0680030415.01 | 0.845003 | 5.324598e-59 | 8.750812e-56 |
| MsG0280010204.01 | MsG0680030636.01 | 0.832598 | 8.626864e-56 | 9.688518e-53 |
| MsG0280010204.01 | MsG0680030992.01 | 0.801977 | 6.979375e-49 | 3.378759e-46 |
| MsG0280010204.01 | MsG0680031334.01 | 0.858913 | 5.944344e-63 | 1.541786e-59 |
| MsG0280010204.01 | MsG0680031355.01 | 0.819957 | 8.839752e-53 | 6.901957e-50 |
| MsG0280010204.01 | MsG0680031446.01 | -0.836548 | 8.772484e-57 | 1.109150e-53 |
| MsG0280010204.01 | MsG0680031712.01 | 0.820031 | 8.503676e-53 | 6.653454e-50 |
| MsG0280010204.01 | MsG0680032430.01 | 0.821739 | 3.440122e-53 | 2.822439e-50 |
| MsG0280010204.01 | MsG0680032996.01 | 0.810029 | 1.412122e-50 | 8.421816e-48 |
| MsG0280010204.01 | MsG0680033391.01 | 0.801968 | 7.010289e-49 | 3.392932e-46 |
| MsG0280010204.01 | MsG0680034190.01 | 0.823708 | 1.197433e-53 | 1.039108e-50 |
| MsG0280010204.01 | MsG0680034219.01 | 0.849347 | 3.428185e-60 | 6.480515e-57 |
| MsG0280010204.01 | MsG0680035582.01 | 0.828563 | 8.384840e-55 | 8.364741e-52 |
| MsG0280010204.01 | MsG0680035659.01 | 0.820531 | 6.529377e-53 | 5.179679e-50 |
| MsG0280010204.01 | MsG0780036550.01 | 0.805703 | 1.174452e-49 | 6.256435e-47 |
| MsG0280010204.01 | MsG0780037082.01 | 0.873986 | 9.608350e-68 | 4.252812e-64 |
| MsG0280010204.01 | MsG0780038636.01 | 0.812432 | 4.252229e-51 | 2.703379e-48 |
| MsG0280010204.01 | MsG0780038833.01 | 0.805144 | 1.538612e-49 | 8.078862e-47 |
| MsG0280010204.01 | MsG0780038911.01 | 0.802714 | 4.921633e-49 | 2.427913e-46 |
| MsG0280010204.01 | MsG0780039143.01 | 0.824804 | 6.617743e-54 | 5.924438e-51 |
| MsG0280010204.01 | MsG0780039841.01 | 0.825933 | 3.577720e-54 | 3.307544e-51 |
| MsG0280010204.01 | MsG0780040148.01 | -0.803552 | 3.301761e-49 | 1.664149e-46 |
| MsG0280010204.01 | MsG0780040596.01 | 0.834779 | 2.459934e-56 | 2.948860e-53 |
| MsG0280010204.01 | MsG0780040858.01 | 0.827511 | 1.502941e-54 | 1.453976e-51 |
| MsG0280010204.01 | MsG0780041294.01 | 0.818735 | 1.678296e-52 | 1.266604e-49 |
| MsG0280010204.01 | MsG0880042134.01 | 0.802584 | 5.233912e-49 | 2.573383e-46 |
| MsG0280010204.01 | MsG0880042294.01 | 0.835646 | 1.486587e-56 | 1.829204e-53 |
| MsG0280010204.01 | MsG0880042314.01 | 0.813684 | 2.260254e-51 | 1.485929e-48 |
| MsG0280010204.01 | MsG0880042404.01 | 0.812271 | 4.610197e-51 | 2.918239e-48 |
| MsG0280010204.01 | MsG0880042436.01 | 0.803565 | 3.280855e-49 | 1.654208e-46 |
| MsG0280010204.01 | MsG0880042611.01 | 0.823818 | 1.128468e-53 | 9.822217e-51 |
| MsG0280010204.01 | MsG0880043002.01 | 0.805087 | 1.580957e-49 | 8.289101e-47 |
| MsG0280010204.01 | MsG0880043003.01 | 0.808516 | 2.980139e-50 | 1.707478e-47 |
| MsG0280010204.01 | MsG0880043303.01 | 0.847397 | 1.186736e-59 | 2.106585e-56 |
| MsG0280010204.01 | MsG0880043456.01 | 0.814803 | 1.278845e-51 | 8.665976e-49 |
| MsG0280010204.01 | MsG0880044062.01 | -0.828529 | 8.545877e-55 | 8.516856e-52 |
| MsG0280010204.01 | MsG0880044455.01 | -0.819375 | 1.200415e-52 | 9.220554e-50 |
| MsG0280010204.01 | MsG0880046058.01 | 0.835141 | 1.994324e-56 | 2.416999e-53 |
| MsG0280010204.01 | MsG0880046088.01 | 0.807851 | 4.130838e-50 | 2.325582e-47 |
| MsG0280010204.01 | MsG0880046285.01 | 0.800105 | 1.684612e-48 | 7.777934e-46 |
| MsG0280010204.01 | MsG0880047427.01 | 0.803411 | 3.531713e-49 | 1.773503e-46 |
| MsG0280010204.01 | MsG0880047689.01 | -0.829836 | 4.119219e-55 | 4.265842e-52 |
| MsG0280010204.01 | MsG0880047763.01 | 0.809354 | 1.972503e-50 | 1.155586e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010204.01.T01 | MTR_0271s0070 | 98.611 | 144 | 2 | 0 | 1 | 144 | 1 | 144 | 8.11e-103 | 290 |
| MsG0280010204.01.T01 | MTR_1g092420 | 98.611 | 144 | 2 | 0 | 1 | 144 | 1 | 144 | 2.04e-102 | 289 |
| MsG0280010204.01.T01 | MTR_2g013680 | 67.832 | 143 | 46 | 0 | 2 | 144 | 3 | 145 | 2.03e-68 | 203 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010204.01.T01 | AT1G53035 | 62.500 | 144 | 54 | 0 | 1 | 144 | 7 | 150 | 7.10e-64 | 192 |
| MsG0280010204.01.T01 | AT1G53035 | 61.806 | 144 | 55 | 0 | 1 | 144 | 7 | 150 | 3.69e-63 | 191 |
| MsG0280010204.01.T01 | AT3G15358 | 61.111 | 144 | 56 | 0 | 1 | 144 | 1 | 144 | 3.91e-61 | 185 |
Find 26 sgRNAs with CRISPR-Local
Find 33 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTGCTTTGGCTATTTCT+TGG | 0.186754 | 2:+66164736 | MsG0280010204.01.T01:CDS |
| GGATTATTGTTGTTCACAAT+TGG | 0.247863 | 2:+66164552 | MsG0280010204.01.T01:CDS |
| CAAACATCAGATTCCTTCTC+TGG | 0.317012 | 2:+66164531 | MsG0280010204.01.T01:CDS |
| GGTTGCTTGTGTTAAGGATA+TGG | 0.337831 | 2:+66164590 | MsG0280010204.01.T01:CDS |
| TCTTGCTTTGGCTATTTCTT+GGG | 0.340551 | 2:+66164737 | MsG0280010204.01.T01:CDS |
| TCTGAAAAGGTACATGTCTT+AGG | 0.347459 | 2:+66164447 | MsG0280010204.01.T01:CDS |
| GATTATTGTTGTTCACAATT+GGG | 0.349528 | 2:+66164553 | MsG0280010204.01.T01:CDS |
| TTCATATTTCAATGGCAGTT+TGG | 0.351079 | 2:+66164649 | MsG0280010204.01.T01:CDS |
| AATTGGGTTTCTTGTGTTCA+TGG | 0.359752 | 2:+66164569 | MsG0280010204.01.T01:CDS |
| TGTTGTTGGGGATCTTGCTT+TGG | 0.362898 | 2:+66164725 | MsG0280010204.01.T01:CDS |
| ATTGGCCTAGGCATGTTGTT+GGG | 0.364725 | 2:+66164712 | MsG0280010204.01.T01:CDS |
| TTTAACATGTGGATCATTGA+TGG | 0.365683 | 2:+66164416 | MsG0280010204.01.T01:CDS |
| TTGAAGAACTTGCTTGTGAT+TGG | 0.405372 | 2:+66164694 | MsG0280010204.01.T01:CDS |
| TTTCAGAGTTTCTTTGCTAA+AGG | 0.414360 | 2:+66164615 | MsG0280010204.01.T01:CDS |
| GTTCATGGTTGCTTGTGTTA+AGG | 0.446942 | 2:+66164584 | MsG0280010204.01.T01:CDS |
| TGTGTTTCTTCATATTTCAA+TGG | 0.458849 | 2:+66164641 | MsG0280010204.01.T01:CDS |
| AACTTGCTTGTGATTGGCCT+AGG | 0.494396 | 2:+66164700 | MsG0280010204.01.T01:CDS |
| GATTGGCCTAGGCATGTTGT+TGG | 0.498297 | 2:+66164711 | MsG0280010204.01.T01:CDS |
| TTGGCCTAGGCATGTTGTTG+GGG | 0.550117 | 2:+66164713 | MsG0280010204.01.T01:CDS |
| AAGACAGCAATTAAGCTACA+AGG | 0.550968 | 2:+66164480 | MsG0280010204.01.T01:CDS |
| TGAATTAATAATTGATCATG+TGG | 0.571519 | 2:-66164510 | None:intergenic |
| AGATCCCCAACAACATGCCT+AGG | 0.575697 | 2:-66164717 | None:intergenic |
| TCAACAATAGCTTTAACATG+TGG | 0.588889 | 2:+66164405 | MsG0280010204.01.T01:CDS |
| AAGGTACATGTCTTAGGACA+TGG | 0.596575 | 2:+66164453 | MsG0280010204.01.T01:CDS |
| GAACAACAATAATCCAGAGA+AGG | 0.611024 | 2:-66164544 | None:intergenic |
| AGACAGCAATTAAGCTACAA+GGG | 0.677628 | 2:+66164481 | MsG0280010204.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATTAATAATTGATCATG+TGG | - | Chr2:66164513-66164532 | None:intergenic | 20.0% |
| ! | TGTGTTTCTTCATATTTCAA+TGG | + | Chr2:66164641-66164660 | MsG0280010204.01.T01:CDS | 25.0% |
| !! | GATTATTGTTGTTCACAATT+GGG | + | Chr2:66164553-66164572 | MsG0280010204.01.T01:CDS | 25.0% |
| !! | TTTGGAGATTTTACTTTGTA+GGG | + | Chr2:66164667-66164686 | MsG0280010204.01.T01:CDS | 25.0% |
| !!! | TGTTTTTTCTTGTGTTTATG+TGG | + | Chr2:66164760-66164779 | MsG0280010204.01.T01:CDS | 25.0% |
| TTCATATTTCAATGGCAGTT+TGG | + | Chr2:66164649-66164668 | MsG0280010204.01.T01:CDS | 30.0% | |
| TTTAACATGTGGATCATTGA+TGG | + | Chr2:66164416-66164435 | MsG0280010204.01.T01:CDS | 30.0% | |
| TTTCAGAGTTTCTTTGCTAA+AGG | + | Chr2:66164615-66164634 | MsG0280010204.01.T01:CDS | 30.0% | |
| ! | GGATTATTGTTGTTCACAAT+TGG | + | Chr2:66164552-66164571 | MsG0280010204.01.T01:CDS | 30.0% |
| ! | GTTTGGAGATTTTACTTTGT+AGG | + | Chr2:66164666-66164685 | MsG0280010204.01.T01:CDS | 30.0% |
| ! | TTTTCTTGTGTTTATGTGGA+GGG | + | Chr2:66164764-66164783 | MsG0280010204.01.T01:CDS | 30.0% |
| ! | TTTTTCTTGTGTTTATGTGG+AGG | + | Chr2:66164763-66164782 | MsG0280010204.01.T01:CDS | 30.0% |
| !! | TCAACAATAGCTTTAACATG+TGG | + | Chr2:66164405-66164424 | MsG0280010204.01.T01:CDS | 30.0% |
| !!! | GATGGTTTTTTACTCTGAAA+AGG | + | Chr2:66164434-66164453 | MsG0280010204.01.T01:CDS | 30.0% |
| AAGACAGCAATTAAGCTACA+AGG | + | Chr2:66164480-66164499 | MsG0280010204.01.T01:CDS | 35.0% | |
| AATTGGGTTTCTTGTGTTCA+TGG | + | Chr2:66164569-66164588 | MsG0280010204.01.T01:CDS | 35.0% | |
| AGACAGCAATTAAGCTACAA+GGG | + | Chr2:66164481-66164500 | MsG0280010204.01.T01:CDS | 35.0% | |
| GAACAACAATAATCCAGAGA+AGG | - | Chr2:66164547-66164566 | None:intergenic | 35.0% | |
| ! | GAGATTTTACTTTGTAGGGA+AGG | + | Chr2:66164671-66164690 | MsG0280010204.01.T01:CDS | 35.0% |
| ! | TCTGAAAAGGTACATGTCTT+AGG | + | Chr2:66164447-66164466 | MsG0280010204.01.T01:CDS | 35.0% |
| ! | TTGAAGAACTTGCTTGTGAT+TGG | + | Chr2:66164694-66164713 | MsG0280010204.01.T01:CDS | 35.0% |
| !! | ATCTTGCTTTGGCTATTTCT+TGG | + | Chr2:66164736-66164755 | MsG0280010204.01.T01:CDS | 35.0% |
| !! | TCTTGCTTTGGCTATTTCTT+GGG | + | Chr2:66164737-66164756 | MsG0280010204.01.T01:CDS | 35.0% |
| AAGGTACATGTCTTAGGACA+TGG | + | Chr2:66164453-66164472 | MsG0280010204.01.T01:CDS | 40.0% | |
| CAAACATCAGATTCCTTCTC+TGG | + | Chr2:66164531-66164550 | MsG0280010204.01.T01:CDS | 40.0% | |
| GGTTGCTTGTGTTAAGGATA+TGG | + | Chr2:66164590-66164609 | MsG0280010204.01.T01:CDS | 40.0% | |
| GTTCATGGTTGCTTGTGTTA+AGG | + | Chr2:66164584-66164603 | MsG0280010204.01.T01:CDS | 40.0% | |
| TGTTGTTGGGGATCTTGCTT+TGG | + | Chr2:66164725-66164744 | MsG0280010204.01.T01:CDS | 45.0% | |
| ! | ATTGGCCTAGGCATGTTGTT+GGG | + | Chr2:66164712-66164731 | MsG0280010204.01.T01:CDS | 45.0% |
| !! | AACTTGCTTGTGATTGGCCT+AGG | + | Chr2:66164700-66164719 | MsG0280010204.01.T01:CDS | 45.0% |
| AGATCCCCAACAACATGCCT+AGG | - | Chr2:66164720-66164739 | None:intergenic | 50.0% | |
| TTGGCCTAGGCATGTTGTTG+GGG | + | Chr2:66164713-66164732 | MsG0280010204.01.T01:CDS | 50.0% | |
| !! | GATTGGCCTAGGCATGTTGT+TGG | + | Chr2:66164711-66164730 | MsG0280010204.01.T01:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 66164366 | 66164800 | 66164366 | ID=MsG0280010204.01;Name=MsG0280010204.01 |
| Chr2 | mRNA | 66164366 | 66164800 | 66164366 | ID=MsG0280010204.01.T01;Parent=MsG0280010204.01;Name=MsG0280010204.01.T01;_AED=0.42;_eAED=0.42;_QI=0|-1|0|1|-1|1|1|0|144 |
| Chr2 | exon | 66164366 | 66164800 | 66164366 | ID=MsG0280010204.01.T01:exon:14249;Parent=MsG0280010204.01.T01 |
| Chr2 | CDS | 66164366 | 66164800 | 66164366 | ID=MsG0280010204.01.T01:cds;Parent=MsG0280010204.01.T01 |
| Gene Sequence |
| Protein sequence |
