Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005446.01.T01 | KEH43708.1 | 72 | 150 | 18 | 1 | 1 | 126 | 627 | 776 | 3.20E-58 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005446.01.T01 | A0A072VQJ3 | 72.000 | 150 | 18 | 1 | 1 | 126 | 627 | 776 | 1.53e-58 | 202 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048322.01 | MsG0180005446.01 | 0.803193 | 3.918137e-49 | 1.956635e-46 |
| MsG0180000055.01 | MsG0180005446.01 | 0.826354 | 2.840659e-54 | 2.657749e-51 |
| MsG0180000271.01 | MsG0180005446.01 | 0.814156 | 1.777940e-51 | 1.183891e-48 |
| MsG0180000363.01 | MsG0180005446.01 | 0.809569 | 1.773463e-50 | 1.044918e-47 |
| MsG0180000546.01 | MsG0180005446.01 | 0.802065 | 6.696183e-49 | 3.249049e-46 |
| MsG0180000680.01 | MsG0180005446.01 | 0.802479 | 5.502178e-49 | 2.697990e-46 |
| MsG0180001712.01 | MsG0180005446.01 | 0.803500 | 3.383632e-49 | 1.703134e-46 |
| MsG0180002140.01 | MsG0180005446.01 | 0.820817 | 5.614087e-53 | 4.489124e-50 |
| MsG0180002283.01 | MsG0180005446.01 | 0.810509 | 1.112826e-50 | 6.720484e-48 |
| MsG0180002750.01 | MsG0180005446.01 | -0.814726 | 1.330570e-51 | 8.997694e-49 |
| MsG0180002955.01 | MsG0180005446.01 | 0.816132 | 6.472844e-52 | 4.548357e-49 |
| MsG0180003510.01 | MsG0180005446.01 | 0.811429 | 7.032409e-51 | 4.352171e-48 |
| MsG0180004824.01 | MsG0180005446.01 | 0.809112 | 2.222457e-50 | 1.293604e-47 |
| MsG0180005160.01 | MsG0180005446.01 | 0.803384 | 3.577384e-49 | 1.795171e-46 |
| MsG0180005270.01 | MsG0180005446.01 | 0.825074 | 5.714306e-54 | 5.155145e-51 |
| MsG0180005446.01 | MsG0180006016.01 | 0.800938 | 1.139651e-48 | 5.374400e-46 |
| MsG0180005446.01 | MsG0180006046.01 | 0.806025 | 1.005178e-49 | 5.398700e-47 |
| MsG0180005446.01 | MsG0180006138.01 | 0.810434 | 1.154978e-50 | 6.961014e-48 |
| MsG0180005446.01 | MsG0280006406.01 | 0.801231 | 9.928643e-49 | 4.716866e-46 |
| MsG0180005446.01 | MsG0280006669.01 | 0.810621 | 1.052360e-50 | 6.374599e-48 |
| MsG0180005446.01 | MsG0280007743.01 | -0.826199 | 3.092354e-54 | 2.880513e-51 |
| MsG0180005446.01 | MsG0280009350.01 | 0.810300 | 1.234705e-50 | 7.415206e-48 |
| MsG0180005446.01 | MsG0280009441.01 | 0.805783 | 1.129735e-49 | 6.030369e-47 |
| MsG0180005446.01 | MsG0280010204.01 | 0.827256 | 1.729750e-54 | 1.661166e-51 |
| MsG0180005446.01 | MsG0280010205.01 | 0.809730 | 1.637409e-50 | 9.689045e-48 |
| MsG0180005446.01 | MsG0280011141.01 | 0.802622 | 5.140362e-49 | 2.529851e-46 |
| MsG0180005446.01 | MsG0280011235.01 | 0.802319 | 5.936174e-49 | 2.899232e-46 |
| MsG0180005446.01 | MsG0280011287.01 | 0.820384 | 7.055962e-53 | 5.575105e-50 |
| MsG0180005446.01 | MsG0280011371.01 | 0.806097 | 9.705862e-50 | 5.222447e-47 |
| MsG0180005446.01 | MsG0280011376.01 | 0.803251 | 3.811713e-49 | 1.906264e-46 |
| MsG0180005446.01 | MsG0380011895.01 | 0.804552 | 2.045222e-49 | 1.057603e-46 |
| MsG0180005446.01 | MsG0380013853.01 | 0.809573 | 1.769615e-50 | 1.042775e-47 |
| MsG0180005446.01 | MsG0380014770.01 | 0.821161 | 4.676692e-53 | 3.775647e-50 |
| MsG0180005446.01 | MsG0380014885.01 | 0.813365 | 2.655677e-51 | 1.730901e-48 |
| MsG0180005446.01 | MsG0380015818.01 | 0.805923 | 1.056058e-49 | 5.657145e-47 |
| MsG0180005446.01 | MsG0380016055.01 | 0.806702 | 7.234461e-50 | 3.953227e-47 |
| MsG0180005446.01 | MsG0380016182.01 | 0.806790 | 6.932771e-50 | 3.796992e-47 |
| MsG0180005446.01 | MsG0380017003.01 | 0.815035 | 1.135924e-51 | 7.745896e-49 |
| MsG0180005446.01 | MsG0380017023.01 | 0.812540 | 4.028115e-51 | 2.568143e-48 |
| MsG0180005446.01 | MsG0380017279.01 | 0.810013 | 1.423395e-50 | 8.485475e-48 |
| MsG0180005446.01 | MsG0480018906.01 | 0.806460 | 8.136799e-50 | 4.419088e-47 |
| MsG0180005446.01 | MsG0480020843.01 | 0.846949 | 1.574464e-59 | 2.754992e-56 |
| MsG0180005446.01 | MsG0480021994.01 | 0.817348 | 3.454332e-52 | 2.509411e-49 |
| MsG0180005446.01 | MsG0480022246.01 | 0.853466 | 2.345798e-61 | 5.073515e-58 |
| MsG0180005446.01 | MsG0480022292.01 | 0.811517 | 6.730343e-51 | 4.174933e-48 |
| MsG0180005446.01 | MsG0480022343.01 | 0.808077 | 3.697487e-50 | 2.094121e-47 |
| MsG0180005446.01 | MsG0480022493.01 | 0.811451 | 6.955659e-51 | 4.307123e-48 |
| MsG0180005446.01 | MsG0480023055.01 | 0.805425 | 1.343346e-49 | 7.104528e-47 |
| MsG0180005446.01 | MsG0480023415.01 | 0.801138 | 1.037233e-48 | 4.916307e-46 |
| MsG0180005446.01 | MsG0480023994.01 | 0.808533 | 2.956429e-50 | 1.694597e-47 |
| MsG0180005446.01 | MsG0480024014.01 | 0.809721 | 1.644724e-50 | 9.730047e-48 |
| MsG0180005446.01 | MsG0580025026.01 | 0.817062 | 4.006888e-52 | 2.888210e-49 |
| MsG0180005446.01 | MsG0580025328.01 | 0.804771 | 1.841186e-49 | 9.575367e-47 |
| MsG0180005446.01 | MsG0580025986.01 | 0.810385 | 1.183535e-50 | 7.123801e-48 |
| MsG0180005446.01 | MsG0580027034.01 | 0.803633 | 3.176274e-49 | 1.604150e-46 |
| MsG0180005446.01 | MsG0580028072.01 | 0.803199 | 3.907221e-49 | 1.951443e-46 |
| MsG0180005446.01 | MsG0580029283.01 | 0.802303 | 5.979926e-49 | 2.919409e-46 |
| MsG0180005446.01 | MsG0680030351.01 | 0.809878 | 1.522302e-50 | 9.042583e-48 |
| MsG0180005446.01 | MsG0680031355.01 | 0.803328 | 3.673679e-49 | 1.840837e-46 |
| MsG0180005446.01 | MsG0680031654.01 | 0.807808 | 4.217186e-50 | 2.371659e-47 |
| MsG0180005446.01 | MsG0680034190.01 | 0.825820 | 3.805985e-54 | 3.507135e-51 |
| MsG0180005446.01 | MsG0680034219.01 | 0.843315 | 1.511652e-58 | 2.356160e-55 |
| MsG0180005446.01 | MsG0680035582.01 | 0.824806 | 6.609686e-54 | 5.917638e-51 |
| MsG0180005446.01 | MsG0680035854.01 | 0.807231 | 5.590666e-50 | 3.097255e-47 |
| MsG0180005446.01 | MsG0780037082.01 | 0.807999 | 3.841049e-50 | 2.170995e-47 |
| MsG0180005446.01 | MsG0780038636.01 | 0.809534 | 1.804790e-50 | 1.062366e-47 |
| MsG0180005446.01 | MsG0780038907.01 | 0.820205 | 7.758741e-53 | 6.099601e-50 |
| MsG0180005446.01 | MsG0780039143.01 | 0.806134 | 9.531773e-50 | 5.133692e-47 |
| MsG0180005446.01 | MsG0780039405.01 | 0.827156 | 1.828083e-54 | 1.750340e-51 |
| MsG0180005446.01 | MsG0780040208.01 | 0.823172 | 1.597872e-53 | 1.365542e-50 |
| MsG0180005446.01 | MsG0780040375.01 | -0.849666 | 2.793157e-60 | 5.334625e-57 |
| MsG0180005446.01 | MsG0780040758.01 | 0.807060 | 6.078755e-50 | 3.352610e-47 |
| MsG0180005446.01 | MsG0780041006.01 | 0.801254 | 9.819947e-49 | 4.667997e-46 |
| MsG0180005446.01 | MsG0880042150.01 | 0.814095 | 1.834575e-51 | 1.219554e-48 |
| MsG0180005446.01 | MsG0880042151.01 | 0.816501 | 5.354191e-52 | 3.800172e-49 |
| MsG0180005446.01 | MsG0880042223.01 | 0.834301 | 3.243746e-56 | 3.833796e-53 |
| MsG0180005446.01 | MsG0880042792.01 | 0.809622 | 1.727641e-50 | 1.019402e-47 |
| MsG0180005446.01 | MsG0880043163.01 | 0.810107 | 1.358401e-50 | 8.117775e-48 |
| MsG0180005446.01 | MsG0880043835.01 | 0.806877 | 6.646382e-50 | 3.648329e-47 |
| MsG0180005446.01 | MsG0880044062.01 | -0.828366 | 9.355422e-55 | 9.279414e-52 |
| MsG0180005446.01 | MsG0880044389.01 | -0.800860 | 1.181925e-48 | 5.562847e-46 |
| MsG0180005446.01 | MsG0880046450.01 | 0.803069 | 4.156970e-49 | 2.069122e-46 |
| MsG0180005446.01 | MsG0880047019.01 | 0.801680 | 8.032076e-49 | 3.859215e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005446.01.T01 | MTR_1g100623 | 72.000 | 150 | 18 | 1 | 1 | 126 | 627 | 776 | 3.88e-62 | 202 |
| MsG0180005446.01.T01 | MTR_1g100623 | 72.000 | 150 | 18 | 1 | 1 | 126 | 675 | 824 | 4.48e-62 | 203 |
| MsG0180005446.01.T01 | MTR_1g100607 | 73.684 | 114 | 19 | 4 | 24 | 126 | 91 | 204 | 1.06e-44 | 145 |
| MsG0180005446.01.T01 | MTR_1g100627 | 61.240 | 129 | 18 | 3 | 22 | 126 | 396 | 516 | 8.19e-37 | 131 |
| MsG0180005446.01.T01 | MTR_6g045273 | 33.520 | 179 | 55 | 6 | 7 | 126 | 928 | 1101 | 2.19e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 36 sgRNAs with CRISPR-Local
Find 50 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAGGGTTAAGAATTATTA+TGG | 0.214950 | 1:+91968196 | MsG0180005446.01.T01:CDS |
| GTGATTCTGTTACTTGTATT+AGG | 0.290750 | 1:+91968501 | MsG0180005446.01.T01:three_prime_UTR |
| ATATTATAGAGAAATTTATT+TGG | 0.306548 | 1:-91968467 | None:intergenic |
| TTAAGAATTATTATGGATCT+TGG | 0.355305 | 1:+91968203 | MsG0180005446.01.T01:CDS |
| GGCTACTGTGAAGGACTATC+TGG | 0.384886 | 1:+91967996 | MsG0180005446.01.T01:CDS |
| CAGGGAAGGGCATGGTTGAC+AGG | 0.385822 | 1:+91968179 | MsG0180005446.01.T01:CDS |
| TTGGTAACTTGATCTTCAAT+TGG | 0.390183 | 1:-91968448 | None:intergenic |
| GTAAAATGTGTAAGTTTGTA+TGG | 0.405493 | 1:+91968543 | MsG0180005446.01.T01:three_prime_UTR |
| TGTGGTGATTGATTATCCTC+AGG | 0.467751 | 1:-91968235 | None:intergenic |
| CTGTCAACCATGCCCTTCCC+TGG | 0.467879 | 1:-91968178 | None:intergenic |
| ACTTCTAAGCTCAGTAATGA+TGG | 0.475886 | 1:+91967922 | MsG0180005446.01.T01:CDS |
| ATACTATATCTAGTGTTGTA+AGG | 0.476683 | 1:+91968599 | MsG0180005446.01.T01:three_prime_UTR |
| TAAAGATCATGTTGCAGAAG+TGG | 0.479475 | 1:+91968382 | MsG0180005446.01.T01:CDS |
| AGTAATGATGGAACTGGCAC+TGG | 0.498521 | 1:+91967934 | MsG0180005446.01.T01:CDS |
| GAGAGCAATGTGAATAGTCC+AGG | 0.510589 | 1:+91968160 | MsG0180005446.01.T01:CDS |
| AAGGCCTAGTGAAGAAGATA+AGG | 0.516903 | 1:+91968029 | MsG0180005446.01.T01:CDS |
| AAGCTCAGTAATGATGGAAC+TGG | 0.535037 | 1:+91967928 | MsG0180005446.01.T01:CDS |
| ACTATCTGGCTGAGAAGCTA+AGG | 0.538588 | 1:+91968010 | MsG0180005446.01.T01:CDS |
| TGTGTAAGTTTGTATGGGTG+TGG | 0.542234 | 1:+91968549 | MsG0180005446.01.T01:three_prime_UTR |
| ACTGGCACTGGTAGTAATGA+AGG | 0.560033 | 1:+91967946 | MsG0180005446.01.T01:CDS |
| AGTGCCTTATCTTCTTCACT+AGG | 0.566989 | 1:-91968033 | None:intergenic |
| TATCTAGTGTTGTAAGGCTG+TGG | 0.570542 | 1:+91968605 | MsG0180005446.01.T01:three_prime_UTR |
| AGAAGATAAGGCACTTTCTG+AGG | 0.578825 | 1:+91968041 | MsG0180005446.01.T01:CDS |
| CAATGTGAATAGTCCAGGGA+AGG | 0.585429 | 1:+91968165 | MsG0180005446.01.T01:CDS |
| AGGGAAGGGCATGGTTGACA+GGG | 0.590934 | 1:+91968180 | MsG0180005446.01.T01:CDS |
| AGACAAAGGGGCTACTGTGA+AGG | 0.610761 | 1:+91967987 | MsG0180005446.01.T01:CDS |
| TAAAATGTGTAAGTTTGTAT+GGG | 0.610935 | 1:+91968544 | MsG0180005446.01.T01:three_prime_UTR |
| GTTGCAGAAGTGGAACAAGT+TGG | 0.612425 | 1:+91968392 | MsG0180005446.01.T01:CDS |
| ATACTTATAGGTGTAGACAT+TGG | 0.616860 | 1:+91968341 | MsG0180005446.01.T01:intron |
| ATCTTGGTTTGCTAAACCTG+AGG | 0.626786 | 1:+91968219 | MsG0180005446.01.T01:CDS |
| AGAGCAATGTGAATAGTCCA+GGG | 0.631175 | 1:+91968161 | MsG0180005446.01.T01:CDS |
| GAATAGTCCAGGGAAGGGCA+TGG | 0.637293 | 1:+91968171 | MsG0180005446.01.T01:CDS |
| GAAGTGGAACAAGTTGGCAA+AGG | 0.645524 | 1:+91968398 | MsG0180005446.01.T01:CDS |
| AATGTGAATAGTCCAGGGAA+GGG | 0.651191 | 1:+91968166 | MsG0180005446.01.T01:CDS |
| GGAACAAGTTGGCAAAGGTG+TGG | 0.655366 | 1:+91968403 | MsG0180005446.01.T01:CDS |
| GAGGATAATCAATCACCACA+AGG | 0.728787 | 1:+91968238 | MsG0180005446.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTATAGAGAAATTTATT+TGG | - | Chr1:91968470-91968489 | None:intergenic | 10.0% |
| !! | ATTTCAGAAACTTTACATAA+AGG | + | Chr1:91968066-91968085 | MsG0180005446.01.T01:intron | 20.0% |
| !! | TAAAATGTGTAAGTTTGTAT+GGG | + | Chr1:91968544-91968563 | MsG0180005446.01.T01:three_prime_UTR | 20.0% |
| !! | TTAAGAATTATTATGGATCT+TGG | + | Chr1:91968203-91968222 | MsG0180005446.01.T01:CDS | 20.0% |
| !! | TTTGATGTTCTTATACTTAT+AGG | + | Chr1:91968329-91968348 | MsG0180005446.01.T01:intron | 20.0% |
| ! | AAACAAAAAATGGAGACAAA+GGG | + | Chr1:91967974-91967993 | MsG0180005446.01.T01:CDS | 25.0% |
| ! | ATACTATATCTAGTGTTGTA+AGG | + | Chr1:91968599-91968618 | MsG0180005446.01.T01:three_prime_UTR | 25.0% |
| ! | GTAAAATGTGTAAGTTTGTA+TGG | + | Chr1:91968543-91968562 | MsG0180005446.01.T01:three_prime_UTR | 25.0% |
| ! | TGAAAAAGAAGATGGAATAT+TGG | + | Chr1:91968102-91968121 | MsG0180005446.01.T01:intron | 25.0% |
| !! | AGAAGTTTTCATATTCAAGA+GGG | - | Chr1:91967908-91967927 | None:intergenic | 25.0% |
| !! | TAGAAGTTTTCATATTCAAG+AGG | - | Chr1:91967909-91967928 | None:intergenic | 25.0% |
| !!! | TATTCCATCTTCTTTTTCAA+AGG | - | Chr1:91968101-91968120 | None:intergenic | 25.0% |
| !!! | TTGTATTAGGTCTTTTTTCA+TGG | + | Chr1:91968514-91968533 | MsG0180005446.01.T01:three_prime_UTR | 25.0% |
| AACAAAAAATGGAGACAAAG+GGG | + | Chr1:91967975-91967994 | MsG0180005446.01.T01:CDS | 30.0% | |
| AGAGAAAAAGAATTACCTTG+TGG | - | Chr1:91968256-91968275 | None:intergenic | 30.0% | |
| ATACTTATAGGTGTAGACAT+TGG | + | Chr1:91968341-91968360 | MsG0180005446.01.T01:intron | 30.0% | |
| GAAACAAAAAATGGAGACAA+AGG | + | Chr1:91967973-91967992 | MsG0180005446.01.T01:CDS | 30.0% | |
| GAAGGAACTGAAACAAAAAA+TGG | + | Chr1:91967964-91967983 | MsG0180005446.01.T01:CDS | 30.0% | |
| GACAGGGTTAAGAATTATTA+TGG | + | Chr1:91968196-91968215 | MsG0180005446.01.T01:CDS | 30.0% | |
| ! | GTGATTCTGTTACTTGTATT+AGG | + | Chr1:91968501-91968520 | MsG0180005446.01.T01:three_prime_UTR | 30.0% |
| ! | TTGGTAACTTGATCTTCAAT+TGG | - | Chr1:91968451-91968470 | None:intergenic | 30.0% |
| ACTTCTAAGCTCAGTAATGA+TGG | + | Chr1:91967922-91967941 | MsG0180005446.01.T01:CDS | 35.0% | |
| TAAAGATCATGTTGCAGAAG+TGG | + | Chr1:91968382-91968401 | MsG0180005446.01.T01:CDS | 35.0% | |
| ! | AGAGCCTTTGAAAAAGAAGA+TGG | + | Chr1:91968094-91968113 | MsG0180005446.01.T01:intron | 35.0% |
| AAGGCCTAGTGAAGAAGATA+AGG | + | Chr1:91968029-91968048 | MsG0180005446.01.T01:CDS | 40.0% | |
| AATGTGAATAGTCCAGGGAA+GGG | + | Chr1:91968166-91968185 | MsG0180005446.01.T01:CDS | 40.0% | |
| AGAGCAATGTGAATAGTCCA+GGG | + | Chr1:91968161-91968180 | MsG0180005446.01.T01:CDS | 40.0% | |
| AGTGCCTTATCTTCTTCACT+AGG | - | Chr1:91968036-91968055 | None:intergenic | 40.0% | |
| GAGGATAATCAATCACCACA+AGG | + | Chr1:91968238-91968257 | MsG0180005446.01.T01:CDS | 40.0% | |
| TATCTAGTGTTGTAAGGCTG+TGG | + | Chr1:91968605-91968624 | MsG0180005446.01.T01:three_prime_UTR | 40.0% | |
| TGTGGTGATTGATTATCCTC+AGG | - | Chr1:91968238-91968257 | None:intergenic | 40.0% | |
| TGTGTAAGTTTGTATGGGTG+TGG | + | Chr1:91968549-91968568 | MsG0180005446.01.T01:three_prime_UTR | 40.0% | |
| ! | AAGCTCAGTAATGATGGAAC+TGG | + | Chr1:91967928-91967947 | MsG0180005446.01.T01:CDS | 40.0% |
| ! | AGAAGATAAGGCACTTTCTG+AGG | + | Chr1:91968041-91968060 | MsG0180005446.01.T01:CDS | 40.0% |
| ! | AGATGGAATATTGGCTAGTG+AGG | + | Chr1:91968111-91968130 | MsG0180005446.01.T01:intron | 40.0% |
| !! | ATCTTGGTTTGCTAAACCTG+AGG | + | Chr1:91968219-91968238 | MsG0180005446.01.T01:CDS | 40.0% |
| ACTATCTGGCTGAGAAGCTA+AGG | + | Chr1:91968010-91968029 | MsG0180005446.01.T01:CDS | 45.0% | |
| CAATGTGAATAGTCCAGGGA+AGG | + | Chr1:91968165-91968184 | MsG0180005446.01.T01:CDS | 45.0% | |
| GAGAGCAATGTGAATAGTCC+AGG | + | Chr1:91968160-91968179 | MsG0180005446.01.T01:CDS | 45.0% | |
| GTTGCAGAAGTGGAACAAGT+TGG | + | Chr1:91968392-91968411 | MsG0180005446.01.T01:CDS | 45.0% | |
| ! | AGTAATGATGGAACTGGCAC+TGG | + | Chr1:91967934-91967953 | MsG0180005446.01.T01:CDS | 45.0% |
| ! | GAAGTGGAACAAGTTGGCAA+AGG | + | Chr1:91968398-91968417 | MsG0180005446.01.T01:CDS | 45.0% |
| !! | ACTGGCACTGGTAGTAATGA+AGG | + | Chr1:91967946-91967965 | MsG0180005446.01.T01:CDS | 45.0% |
| AGACAAAGGGGCTACTGTGA+AGG | + | Chr1:91967987-91968006 | MsG0180005446.01.T01:CDS | 50.0% | |
| GGCTACTGTGAAGGACTATC+TGG | + | Chr1:91967996-91968015 | MsG0180005446.01.T01:CDS | 50.0% | |
| ! | GGAACAAGTTGGCAAAGGTG+TGG | + | Chr1:91968403-91968422 | MsG0180005446.01.T01:CDS | 50.0% |
| GAATAGTCCAGGGAAGGGCA+TGG | + | Chr1:91968171-91968190 | MsG0180005446.01.T01:CDS | 55.0% | |
| ! | AGGGAAGGGCATGGTTGACA+GGG | + | Chr1:91968180-91968199 | MsG0180005446.01.T01:CDS | 55.0% |
| CTGTCAACCATGCCCTTCCC+TGG | - | Chr1:91968181-91968200 | None:intergenic | 60.0% | |
| ! | CAGGGAAGGGCATGGTTGAC+AGG | + | Chr1:91968179-91968198 | MsG0180005446.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 91967892 | 91968713 | 91967892 | ID=MsG0180005446.01;Name=MsG0180005446.01 |
| Chr1 | mRNA | 91967892 | 91968713 | 91967892 | ID=MsG0180005446.01.T01;Parent=MsG0180005446.01;Name=MsG0180005446.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0.5|0.33|1|1|1|3|271|129 |
| Chr1 | exon | 91967892 | 91968062 | 91967892 | ID=MsG0180005446.01.T01:exon:15889;Parent=MsG0180005446.01.T01 |
| Chr1 | exon | 91968133 | 91968259 | 91968133 | ID=MsG0180005446.01.T01:exon:15890;Parent=MsG0180005446.01.T01 |
| Chr1 | exon | 91968351 | 91968713 | 91968351 | ID=MsG0180005446.01.T01:exon:15891;Parent=MsG0180005446.01.T01 |
| Chr1 | CDS | 91967892 | 91968062 | 91967892 | ID=MsG0180005446.01.T01:cds;Parent=MsG0180005446.01.T01 |
| Chr1 | CDS | 91968133 | 91968259 | 91968133 | ID=MsG0180005446.01.T01:cds;Parent=MsG0180005446.01.T01 |
| Chr1 | CDS | 91968351 | 91968442 | 91968351 | ID=MsG0180005446.01.T01:cds;Parent=MsG0180005446.01.T01 |
| Chr1 | three_prime_UTR | 91968443 | 91968713 | 91968443 | ID=MsG0180005446.01.T01:three_prime_utr;Parent=MsG0180005446.01.T01 |
| Gene Sequence |
| Protein sequence |
