Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880046930.01.T01 | XP_013458177.1 | 89.781 | 274 | 6 | 1 | 1 | 252 | 1 | 274 | 8.13E-176 | 499 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880046930.01.T01 | P50651 | 72.993 | 274 | 52 | 1 | 1 | 252 | 1 | 274 | 6.98E-145 | 414 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880046930.01.T01 | A0A072USZ2 | 89.781 | 274 | 6 | 1 | 1 | 252 | 1 | 274 | 3.88e-176 | 499 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048683.01 | MsG0880046930.01 | 0.800065 | 1.716791e-48 | 7.918473e-46 |
MsG0080048748.01 | MsG0880046930.01 | 0.800513 | 1.391267e-48 | 6.490452e-46 |
MsG0080048761.01 | MsG0880046930.01 | -0.813326 | 2.709034e-51 | 1.763742e-48 |
MsG0080048817.01 | MsG0880046930.01 | 0.820301 | 7.373272e-53 | 5.811932e-50 |
MsG0080048849.01 | MsG0880046930.01 | 0.820542 | 6.491163e-53 | 5.150981e-50 |
MsG0080049069.01 | MsG0880046930.01 | 0.818109 | 2.327388e-52 | 1.726331e-49 |
MsG0180000152.01 | MsG0880046930.01 | 0.804641 | 1.959388e-49 | 1.015566e-46 |
MsG0180000544.01 | MsG0880046930.01 | -0.821730 | 3.456754e-53 | 2.835403e-50 |
MsG0180000546.01 | MsG0880046930.01 | 0.827255 | 1.731175e-54 | 1.662462e-51 |
MsG0180000550.01 | MsG0880046930.01 | 0.802520 | 5.396710e-49 | 2.648974e-46 |
MsG0180001149.01 | MsG0880046930.01 | 0.822277 | 2.581992e-53 | 2.151257e-50 |
MsG0180001213.01 | MsG0880046930.01 | 0.830715 | 2.512085e-55 | 2.668417e-52 |
MsG0180002184.01 | MsG0880046930.01 | 0.821111 | 4.803082e-53 | 3.872329e-50 |
MsG0180002482.01 | MsG0880046930.01 | 0.805493 | 1.299739e-49 | 6.886026e-47 |
MsG0880044976.01 | MsG0880046930.01 | 0.815477 | 9.060591e-52 | 6.254050e-49 |
MsG0880045605.01 | MsG0880046930.01 | -0.818722 | 1.689984e-52 | 1.274946e-49 |
MsG0880045926.01 | MsG0880046930.01 | 0.800687 | 1.282083e-48 | 6.007511e-46 |
MsG0880046536.01 | MsG0880046930.01 | 0.892411 | 1.627093e-74 | 1.485832e-70 |
MsG0880046930.01 | MsG0880046963.01 | -0.810036 | 1.407472e-50 | 8.395460e-48 |
MsG0880046930.01 | MsG0880047763.01 | 0.820899 | 5.375468e-53 | 4.308270e-50 |
MsG0180003189.01 | MsG0880046930.01 | 0.823401 | 1.412949e-53 | 1.215184e-50 |
MsG0180003697.01 | MsG0880046930.01 | 0.841057 | 5.984941e-58 | 8.689369e-55 |
MsG0180003854.01 | MsG0880046930.01 | 0.824553 | 7.583477e-54 | 6.739854e-51 |
MsG0180003952.01 | MsG0880046930.01 | 0.818527 | 1.871438e-52 | 1.404319e-49 |
MsG0180004025.01 | MsG0880046930.01 | 0.855031 | 8.284921e-62 | 1.886975e-58 |
MsG0180004997.01 | MsG0880046930.01 | 0.849019 | 4.229109e-60 | 7.910155e-57 |
MsG0180005052.01 | MsG0880046930.01 | 0.836287 | 1.022349e-56 | 1.282724e-53 |
MsG0180005270.01 | MsG0880046930.01 | 0.808884 | 2.487101e-50 | 1.438719e-47 |
MsG0180005686.01 | MsG0880046930.01 | 0.818566 | 1.833642e-52 | 1.377364e-49 |
MsG0180005881.01 | MsG0880046930.01 | -0.805426 | 1.342886e-49 | 7.102276e-47 |
MsG0180005927.01 | MsG0880046930.01 | 0.803326 | 3.677102e-49 | 1.842458e-46 |
MsG0180006055.01 | MsG0880046930.01 | 0.809520 | 1.816820e-50 | 1.069049e-47 |
MsG0180006144.01 | MsG0880046930.01 | 0.828161 | 1.048247e-54 | 1.033602e-51 |
MsG0180006220.01 | MsG0880046930.01 | 0.871230 | 8.008044e-67 | 3.206120e-63 |
MsG0780040566.01 | MsG0880046930.01 | -0.859835 | 3.140820e-63 | 8.410368e-60 |
MsG0780040596.01 | MsG0880046930.01 | 0.818762 | 1.654717e-52 | 1.249798e-49 |
MsG0780041747.01 | MsG0880046930.01 | 0.860919 | 1.475776e-63 | 4.101371e-60 |
MsG0880041852.01 | MsG0880046930.01 | 0.806146 | 9.479810e-50 | 5.107162e-47 |
MsG0880042794.01 | MsG0880046930.01 | 0.838306 | 3.109231e-57 | 4.147419e-54 |
MsG0880043867.01 | MsG0880046930.01 | 0.827875 | 1.228642e-54 | 1.201324e-51 |
MsG0880043905.01 | MsG0880046930.01 | 0.819943 | 8.905817e-53 | 6.950602e-50 |
MsG0280011059.01 | MsG0880046930.01 | -0.828552 | 8.438430e-55 | 8.415411e-52 |
MsG0280011376.01 | MsG0880046930.01 | 0.840993 | 6.220085e-58 | 9.013520e-55 |
MsG0380011895.01 | MsG0880046930.01 | 0.824472 | 7.924030e-54 | 7.025375e-51 |
MsG0380012005.01 | MsG0880046930.01 | 0.833835 | 4.244908e-56 | 4.947538e-53 |
MsG0380012310.01 | MsG0880046930.01 | 0.803273 | 3.771490e-49 | 1.887220e-46 |
MsG0380013467.01 | MsG0880046930.01 | 0.837277 | 5.714949e-57 | 7.386371e-54 |
MsG0380013853.01 | MsG0880046930.01 | 0.855769 | 5.051316e-62 | 1.179165e-58 |
MsG0380014727.01 | MsG0880046930.01 | 0.809014 | 2.332382e-50 | 1.353946e-47 |
MsG0380014756.01 | MsG0880046930.01 | 0.833918 | 4.045278e-56 | 4.726867e-53 |
MsG0680031334.01 | MsG0880046930.01 | 0.847803 | 9.175552e-60 | 1.649887e-56 |
MsG0680032058.01 | MsG0880046930.01 | 0.815443 | 9.219853e-52 | 6.357738e-49 |
MsG0680032204.01 | MsG0880046930.01 | 0.804857 | 1.766640e-49 | 9.208400e-47 |
MsG0680032460.01 | MsG0880046930.01 | -0.827461 | 1.544633e-54 | 1.492281e-51 |
MsG0680035588.01 | MsG0880046930.01 | 0.804362 | 2.239861e-49 | 1.152654e-46 |
MsG0480018995.01 | MsG0880046930.01 | 0.809781 | 1.596914e-50 | 9.462122e-48 |
MsG0480019126.01 | MsG0880046930.01 | 0.874565 | 6.114633e-68 | 2.765088e-64 |
MsG0480019384.01 | MsG0880046930.01 | 0.819185 | 1.326290e-52 | 1.013451e-49 |
MsG0480019547.01 | MsG0880046930.01 | 0.809261 | 2.065241e-50 | 1.206871e-47 |
MsG0480019562.01 | MsG0880046930.01 | 0.802559 | 5.297592e-49 | 2.602927e-46 |
MsG0480020024.01 | MsG0880046930.01 | 0.806350 | 8.584009e-50 | 4.648664e-47 |
MsG0480020025.01 | MsG0880046930.01 | 0.807091 | 5.986186e-50 | 3.304218e-47 |
MsG0480020322.01 | MsG0880046930.01 | 0.801007 | 1.102937e-48 | 5.210731e-46 |
MsG0480021201.01 | MsG0880046930.01 | 0.823453 | 1.373939e-53 | 1.183454e-50 |
MsG0480021776.01 | MsG0880046930.01 | -0.855947 | 4.480851e-62 | 1.052241e-58 |
MsG0480022222.01 | MsG0880046930.01 | 0.822309 | 2.538494e-53 | 2.116938e-50 |
MsG0480022739.01 | MsG0880046930.01 | -0.806069 | 9.836774e-50 | 5.289195e-47 |
MsG0480023162.01 | MsG0880046930.01 | 0.826705 | 2.342658e-54 | 2.213779e-51 |
MsG0480023174.01 | MsG0880046930.01 | 0.824970 | 6.048951e-54 | 5.440792e-51 |
MsG0480023652.01 | MsG0880046930.01 | 0.871049 | 9.188298e-67 | 3.654267e-63 |
MsG0480023747.01 | MsG0880046930.01 | 0.809312 | 2.013613e-50 | 1.178286e-47 |
MsG0480023814.01 | MsG0880046930.01 | 0.803678 | 3.108139e-49 | 1.571529e-46 |
MsG0580024494.01 | MsG0880046930.01 | 0.817363 | 3.427587e-52 | 2.491061e-49 |
MsG0580024495.01 | MsG0880046930.01 | 0.858047 | 1.077182e-62 | 2.713290e-59 |
MsG0580025280.01 | MsG0880046930.01 | 0.809194 | 2.134554e-50 | 1.245168e-47 |
MsG0580025467.01 | MsG0880046930.01 | 0.810464 | 1.137572e-50 | 6.861920e-48 |
MsG0580025826.01 | MsG0880046930.01 | 0.834688 | 2.593097e-56 | 3.099946e-53 |
MsG0580026032.01 | MsG0880046930.01 | 0.808211 | 3.462893e-50 | 1.968291e-47 |
MsG0380015216.01 | MsG0880046930.01 | 0.819011 | 1.452600e-52 | 1.104793e-49 |
MsG0380015533.01 | MsG0880046930.01 | 0.830771 | 2.433698e-55 | 2.589368e-52 |
MsG0380015703.01 | MsG0880046930.01 | 0.833797 | 4.338641e-56 | 5.050812e-53 |
MsG0380015964.01 | MsG0880046930.01 | 0.814422 | 1.553327e-51 | 1.041854e-48 |
MsG0380015965.01 | MsG0880046930.01 | 0.831632 | 1.495299e-55 | 1.632064e-52 |
MsG0380016004.01 | MsG0880046930.01 | 0.808290 | 3.331245e-50 | 1.897366e-47 |
MsG0380016182.01 | MsG0880046930.01 | 0.841667 | 4.135334e-58 | 6.119400e-55 |
MsG0380016191.01 | MsG0880046930.01 | -0.849388 | 3.338555e-60 | 6.318759e-57 |
MsG0380016828.01 | MsG0880046930.01 | -0.824213 | 9.119181e-54 | 8.025567e-51 |
MsG0380017022.01 | MsG0880046930.01 | 0.813224 | 2.852087e-51 | 1.851616e-48 |
MsG0380017023.01 | MsG0880046930.01 | 0.862694 | 4.226592e-64 | 1.248844e-60 |
MsG0380017085.01 | MsG0880046930.01 | 0.861113 | 1.289061e-63 | 3.606632e-60 |
MsG0380017178.01 | MsG0880046930.01 | -0.815245 | 1.020227e-51 | 6.996384e-49 |
MsG0380017198.01 | MsG0880046930.01 | 0.805982 | 1.025974e-49 | 5.504646e-47 |
MsG0380017866.01 | MsG0880046930.01 | 0.807474 | 4.967167e-50 | 2.769281e-47 |
MsG0480018426.01 | MsG0880046930.01 | 0.835610 | 1.518484e-56 | 1.866402e-53 |
MsG0580028901.01 | MsG0880046930.01 | 0.833641 | 4.746176e-56 | 5.498754e-53 |
MsG0580029355.01 | MsG0880046930.01 | 0.868570 | 5.917483e-66 | 2.150967e-62 |
MsG0580029717.01 | MsG0880046930.01 | 0.819858 | 9.315159e-53 | 7.252881e-50 |
MsG0680030415.01 | MsG0880046930.01 | 0.814385 | 1.582629e-51 | 1.060481e-48 |
MsG0680030636.01 | MsG0880046930.01 | 0.881014 | 3.410887e-70 | 1.965614e-66 |
MsG0280006753.01 | MsG0880046930.01 | -0.800371 | 1.487327e-48 | 6.913805e-46 |
MsG0280007211.01 | MsG0880046930.01 | -0.806650 | 7.420928e-50 | 4.049441e-47 |
MsG0280007763.01 | MsG0880046930.01 | 0.830057 | 3.638419e-55 | 3.791178e-52 |
MsG0280008928.01 | MsG0880046930.01 | 0.810605 | 1.060730e-50 | 6.422534e-48 |
MsG0280008929.01 | MsG0880046930.01 | 0.812589 | 3.929311e-51 | 2.508302e-48 |
MsG0280010288.01 | MsG0880046930.01 | 0.819400 | 1.185028e-52 | 9.109111e-50 |
MsG0780036666.01 | MsG0880046930.01 | 0.801126 | 1.042832e-48 | 4.941366e-46 |
MsG0780036705.01 | MsG0880046930.01 | 0.841517 | 4.528792e-58 | 6.671096e-55 |
MsG0780037082.01 | MsG0880046930.01 | 0.857307 | 1.784289e-62 | 4.384172e-59 |
MsG0780037105.01 | MsG0880046930.01 | 0.836312 | 1.007261e-56 | 1.264790e-53 |
MsG0780038309.01 | MsG0880046930.01 | -0.814816 | 1.270640e-51 | 8.613235e-49 |
MsG0780040148.01 | MsG0880046930.01 | -0.810312 | 1.227373e-50 | 7.373601e-48 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880046930.01.T01 | MTR_4g117370 | 89.781 | 274 | 6 | 1 | 1 | 252 | 1 | 274 | 9.84e-180 | 499 |
MsG0880046930.01.T01 | MTR_8g469010 | 71.373 | 255 | 51 | 1 | 18 | 250 | 6 | 260 | 2.32e-132 | 379 |
MsG0880046930.01.T01 | MTR_1g050472 | 69.804 | 255 | 55 | 1 | 18 | 250 | 6 | 260 | 9.98e-130 | 372 |
MsG0880046930.01.T01 | MTR_0268s0080 | 70.196 | 255 | 54 | 1 | 18 | 250 | 6 | 260 | 1.82e-129 | 372 |
MsG0880046930.01.T01 | MTR_7g029110 | 70.588 | 255 | 53 | 1 | 18 | 250 | 6 | 260 | 7.23e-123 | 355 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880046930.01.T01 | AT3G23580 | 72.993 | 274 | 52 | 1 | 1 | 252 | 1 | 274 | 7.12e-146 | 414 |
MsG0880046930.01.T01 | AT3G27060 | 69.531 | 256 | 55 | 2 | 18 | 250 | 6 | 261 | 3.39e-122 | 353 |
Find 91 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTAGCTGGTATTATTAATT+AGG | 0.100138 | 8:-80097317 | MsG0880046930.01.T01:three_prime_UTR |
ATGAATTTGTAATGTCTTTA+TGG | 0.161576 | 8:-80097251 | MsG0880046930.01.T01:three_prime_UTR |
AAGCGGGTAACCACCAATTT+TGG | 0.162037 | 8:+80097999 | None:intergenic |
TCAGCTTCTGTGCCATATTC+TGG | 0.174738 | 8:-80098449 | MsG0880046930.01.T01:intron |
ATAAGTTCTTCTCCCAAAAT+TGG | 0.201055 | 8:-80098012 | MsG0880046930.01.T01:CDS |
AAAAGGCTGAAGCCAGTTTC+TGG | 0.208732 | 8:-80100397 | MsG0880046930.01.T01:CDS |
TCTTCCTTAACACAACAATA+TGG | 0.218700 | 8:-80100546 | MsG0880046930.01.T01:exon |
ACACAACAATATGGGTTCTT+TGG | 0.230504 | 8:-80100537 | MsG0880046930.01.T01:exon |
AAAGCTTCAAGTATCATTAA+TGG | 0.276798 | 8:-80097423 | MsG0880046930.01.T01:three_prime_UTR |
TGATAGGCTCGGGCATTCTA+TGG | 0.295173 | 8:-80099153 | MsG0880046930.01.T01:intron |
ATAGAGTAACTTGGCCGTTT+TGG | 0.307198 | 8:+80097225 | None:intergenic |
CTAGCTGGTATTATTAATTA+GGG | 0.309180 | 8:-80097316 | MsG0880046930.01.T01:three_prime_UTR |
TTGCCCTTTCAGGTTTCCTT+GGG | 0.310825 | 8:-80097969 | MsG0880046930.01.T01:CDS |
TTTGCCCTTTCAGGTTTCCT+TGG | 0.319161 | 8:-80097970 | MsG0880046930.01.T01:CDS |
GGGCATTGAGTTGGATTAAC+AGG | 0.324433 | 8:-80098912 | MsG0880046930.01.T01:intron |
TCTGAATGATGTTCAAATTC+CGG | 0.339797 | 8:-80099534 | MsG0880046930.01.T01:CDS |
AGCAACTTGTATCTTTGTTC+CGG | 0.340309 | 8:-80100627 | MsG0880046930.01.T01:five_prime_UTR |
TACATCTGATGGAATCGTTT+TGG | 0.341636 | 8:-80099576 | MsG0880046930.01.T01:CDS |
ATCCATCAATCCAACATCTT+TGG | 0.346733 | 8:-80100655 | None:intergenic |
TGTGTTTGTTTCATTAGTAT+TGG | 0.347617 | 8:+80100470 | None:intergenic |
AAAGTTGTTTGTAGCGAATA+GGG | 0.351905 | 8:+80100432 | None:intergenic |
GCCCTCCCTTGTGCATTGAT+TGG | 0.362088 | 8:-80098135 | MsG0880046930.01.T01:CDS |
AAGCTTCAAGTATCATTAAT+GGG | 0.363977 | 8:-80097422 | MsG0880046930.01.T01:three_prime_UTR |
CAAAGTTGTTTGTAGCGAAT+AGG | 0.369374 | 8:+80100431 | None:intergenic |
GTATGTACCGGTCCAGAAAC+TGG | 0.373363 | 8:+80100385 | None:intergenic |
GAACCCATATTGTTGTGTTA+AGG | 0.374875 | 8:+80100542 | None:intergenic |
ATTTGTCGCTGACAGGCTAT+TGG | 0.379699 | 8:-80098080 | MsG0880046930.01.T01:CDS |
AGTTTAGCCTACACATATAT+AGG | 0.389549 | 8:-80097345 | MsG0880046930.01.T01:three_prime_UTR |
CTTCCTTAACACAACAATAT+GGG | 0.394042 | 8:-80100545 | MsG0880046930.01.T01:exon |
TCAGCGACAAATTTATGTAT+TGG | 0.395442 | 8:+80098091 | None:intergenic |
GCAATCGAGAATATTCATTC+TGG | 0.401015 | 8:-80099120 | MsG0880046930.01.T01:intron |
AAACCCTTTGCTCTGTTATC+CGG | 0.401425 | 8:+80100608 | None:intergenic |
CAAAGTTCTTCCCATCATCT+TGG | 0.402459 | 8:+80097490 | None:intergenic |
TATTCGCTACAAACAACTTT+GGG | 0.404981 | 8:-80100429 | MsG0880046930.01.T01:CDS |
CTATTCGCTACAAACAACTT+TGG | 0.419868 | 8:-80100430 | MsG0880046930.01.T01:CDS |
ACGTGGAAAATCCCTTTGAT+TGG | 0.420885 | 8:-80097929 | MsG0880046930.01.T01:exon |
ACTTTGGGAGATGTACAAAA+AGG | 0.422922 | 8:-80100414 | MsG0880046930.01.T01:CDS |
AATATGGGTTCTTTGGAGAA+TGG | 0.457181 | 8:-80100530 | MsG0880046930.01.T01:CDS |
TATGTATTGGCTCATAAGCT+TGG | 0.458646 | 8:+80098104 | None:intergenic |
TGGGATGATGGTGATGTATT+CGG | 0.460995 | 8:-80097403 | MsG0880046930.01.T01:three_prime_UTR |
CGATAGAAAATAGAGTAACT+TGG | 0.461578 | 8:+80097216 | None:intergenic |
TGTCTTTATGGCTGCCAAAA+CGG | 0.464107 | 8:-80097239 | MsG0880046930.01.T01:three_prime_UTR |
TCTTCCTTGTGTTGCAAGGA+AGG | 0.470108 | 8:-80098941 | MsG0880046930.01.T01:CDS |
AGGCTGAATGGGCATTGAGT+TGG | 0.487477 | 8:-80098921 | MsG0880046930.01.T01:CDS |
TACATAAATTTGTCGCTGAC+AGG | 0.487715 | 8:-80098087 | MsG0880046930.01.T01:CDS |
GGAAAATCCCTTTGATTGGA+TGG | 0.494213 | 8:-80097925 | MsG0880046930.01.T01:exon |
AGTTCTTCTCCCAAAATTGG+TGG | 0.505866 | 8:-80098009 | MsG0880046930.01.T01:CDS |
AATAAAGTCCATCCAATCAA+AGG | 0.508574 | 8:+80097917 | None:intergenic |
GTTCCGGATAACAGAGCAAA+GGG | 0.512669 | 8:-80100611 | MsG0880046930.01.T01:five_prime_UTR |
CTCCTATGATGTACAACACT+GGG | 0.518556 | 8:-80099654 | MsG0880046930.01.T01:CDS |
AAGTATCATTAATGGGATGA+TGG | 0.520186 | 8:-80097415 | MsG0880046930.01.T01:three_prime_UTR |
GGAACGCCGAAGAAAATAAG+AGG | 0.521689 | 8:-80100509 | MsG0880046930.01.T01:CDS |
AGTTCTTCCCATCATCTTGG+AGG | 0.524128 | 8:+80097493 | None:intergenic |
CACCCCAAGGAAACCTGAAA+GGG | 0.530780 | 8:+80097966 | None:intergenic |
GTTCTGTTGTTCCATGACAT+TGG | 0.532994 | 8:-80097275 | MsG0880046930.01.T01:three_prime_UTR |
GAGACAGCTAGATTTCGAAC+GGG | 0.536560 | 8:-80098211 | MsG0880046930.01.T01:CDS |
ATAAAGTCCATCCAATCAAA+GGG | 0.536591 | 8:+80097918 | None:intergenic |
TGCCCAGTGTTGTACATCAT+AGG | 0.537246 | 8:+80099652 | None:intergenic |
AAGAAGATGATAAGAAGAAG+AGG | 0.539364 | 8:+80100565 | None:intergenic |
ATGTCAAGCCTCCAAGATGA+TGG | 0.539662 | 8:-80097501 | MsG0880046930.01.T01:three_prime_UTR |
AAAATCTTCCTTGTGTTGCA+AGG | 0.541514 | 8:-80098945 | MsG0880046930.01.T01:CDS |
GTGTTGCAAGGAAGGCTGAA+TGG | 0.543120 | 8:-80098933 | MsG0880046930.01.T01:CDS |
GCCAATCAATGCACAAGGGA+GGG | 0.550023 | 8:+80098134 | None:intergenic |
TGTTGCAAGGAAGGCTGAAT+GGG | 0.552298 | 8:-80098932 | MsG0880046930.01.T01:CDS |
ACAAATTCATGCCAATGTCA+TGG | 0.564753 | 8:+80097264 | None:intergenic |
GTAATTACCTATATATGTGT+AGG | 0.574932 | 8:+80097338 | None:intergenic |
TGAGACAGCTAGATTTCGAA+CGG | 0.575367 | 8:-80098212 | MsG0880046930.01.T01:CDS |
ATATATAGGTAATTACTAGC+TGG | 0.580629 | 8:-80097331 | MsG0880046930.01.T01:three_prime_UTR |
TCAGCCTTCCTTGCAACACA+AGG | 0.584139 | 8:+80098937 | None:intergenic |
GCACCCCAAGGAAACCTGAA+AGG | 0.585810 | 8:+80097965 | None:intergenic |
AGAGATGTATAGCTTGCTGT+TGG | 0.591810 | 8:-80099019 | MsG0880046930.01.T01:CDS |
TGCCAATCAATGCACAAGGG+AGG | 0.592084 | 8:+80098133 | None:intergenic |
TCTCCTATGATGTACAACAC+TGG | 0.592747 | 8:-80099655 | MsG0880046930.01.T01:CDS |
TGCCCTTTCAGGTTTCCTTG+GGG | 0.594621 | 8:-80097968 | MsG0880046930.01.T01:CDS |
AAGTTGGTTGACAGCTGAAG+AGG | 0.595614 | 8:-80099684 | MsG0880046930.01.T01:intron |
GCTGAAGCCAGTTTCTGGAC+CGG | 0.596341 | 8:-80100392 | MsG0880046930.01.T01:intron |
AACATGATTGAGCAGAGGAA+AGG | 0.603731 | 8:-80097571 | MsG0880046930.01.T01:intron |
TTATAATTCCCATGTTACCA+AGG | 0.603803 | 8:+80098031 | None:intergenic |
TGTCAAGCCTCCAAGATGAT+GGG | 0.607267 | 8:-80097500 | MsG0880046930.01.T01:three_prime_UTR |
TGTTCCGGATAACAGAGCAA+AGG | 0.611755 | 8:-80100612 | MsG0880046930.01.T01:five_prime_UTR |
TTCATGCCAATCAATGCACA+AGG | 0.618751 | 8:+80098129 | None:intergenic |
TATGAAGTGCTTCTCAGAGT+CGG | 0.621934 | 8:+80099622 | None:intergenic |
AAGGGTGGGTGATTATCAGA+AGG | 0.633466 | 8:-80097532 | MsG0880046930.01.T01:three_prime_UTR |
GTGCTTCTCAGAGTCGGACA+AGG | 0.636420 | 8:+80099628 | None:intergenic |
GAGGGCATCACAGACAAACT+CGG | 0.641352 | 8:+80098152 | None:intergenic |
TCATTTGAGAATGTCAGACC+CGG | 0.642175 | 8:+80098405 | None:intergenic |
GAATGATGTTCAAATTCCGG+AGG | 0.652575 | 8:-80099531 | MsG0880046930.01.T01:intron |
GAGCTAATCTCTAGAGACGA+GGG | 0.653908 | 8:-80098384 | MsG0880046930.01.T01:CDS |
TGAGCTAATCTCTAGAGACG+AGG | 0.689131 | 8:-80098385 | MsG0880046930.01.T01:CDS |
TACTAATGAAACAAACACAG+AGG | 0.751367 | 8:-80100466 | MsG0880046930.01.T01:CDS |
TCATGCCAATCAATGCACAA+GGG | 0.758595 | 8:+80098130 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTAATTAAATCATATTAAAT+TGG | - | Chr8:80097673-80097692 | MsG0880046930.01.T01:intron | 10.0% |
!! | TTATTAAAATTGAATGATCA+AGG | + | Chr8:80098108-80098127 | None:intergenic | 15.0% |
!!! | CAATTGATTTATTTATTGAT+AGG | - | Chr8:80098646-80098665 | MsG0880046930.01.T01:intron | 15.0% |
!!! | GAAAAAATTAAATTGTTGTT+TGG | + | Chr8:80097644-80097663 | None:intergenic | 15.0% |
!!! | TAATGTTTTGATATTAGTTT+TGG | - | Chr8:80099543-80099562 | MsG0880046930.01.T01:CDS | 15.0% |
!!! | TTATGTTAATTCTTCTTTTA+AGG | - | Chr8:80098462-80098481 | MsG0880046930.01.T01:intron | 15.0% |
!! | AAAAGAAAAAATGTATGTAC+CGG | + | Chr8:80097445-80097464 | None:intergenic | 20.0% |
!! | AATAGTACAAAATTGAAGTT+TGG | + | Chr8:80097530-80097549 | None:intergenic | 20.0% |
!! | AATTTGTAATAGTAAAAGTC+TGG | - | Chr8:80098978-80098997 | MsG0880046930.01.T01:CDS | 20.0% |
!! | ATGAATTTGTAATGTCTTTA+TGG | - | Chr8:80100564-80100583 | MsG0880046930.01.T01:five_prime_UTR | 20.0% |
!!! | AACTTTTGAAAAAGAAACAA+GGG | + | Chr8:80099285-80099304 | None:intergenic | 20.0% |
!!! | ACTTTTTCATTCATTAGTTT+TGG | - | Chr8:80099501-80099520 | MsG0880046930.01.T01:intron | 20.0% |
!!! | TCAATTTTAATAACTGAAGT+TGG | - | Chr8:80098115-80098134 | MsG0880046930.01.T01:CDS | 20.0% |
!!! | TCTTGAAAAAATATTGACTT+AGG | - | Chr8:80099983-80100002 | MsG0880046930.01.T01:intron | 20.0% |
!!! | TTAATTTTCGTAGTACTTTT+TGG | - | Chr8:80098491-80098510 | MsG0880046930.01.T01:intron | 20.0% |
!!! | TTTTGAATGTATTTTGAAGA+TGG | - | Chr8:80097929-80097948 | MsG0880046930.01.T01:exon | 20.0% |
! | AAAGCTTCAAGTATCATTAA+TGG | - | Chr8:80100392-80100411 | MsG0880046930.01.T01:intron | 25.0% |
! | AAGCTTCAAGTATCATTAAT+GGG | - | Chr8:80100393-80100412 | MsG0880046930.01.T01:CDS | 25.0% |
! | AAGGCAAAAATGATAAATCT+CGG | - | Chr8:80099074-80099093 | MsG0880046930.01.T01:intron | 25.0% |
! | AAGTAGTATGTGAAACTAAT+CGG | + | Chr8:80098372-80098391 | None:intergenic | 25.0% |
! | ACTAGCTGGTATTATTAATT+AGG | - | Chr8:80100498-80100517 | MsG0880046930.01.T01:CDS | 25.0% |
! | ATATATAGGTAATTACTAGC+TGG | - | Chr8:80100484-80100503 | MsG0880046930.01.T01:CDS | 25.0% |
! | ATCATGTACCAAAAATTGAT+TGG | - | Chr8:80099005-80099024 | MsG0880046930.01.T01:CDS | 25.0% |
! | ATTGAATGATCAAGGTAAAA+AGG | + | Chr8:80098100-80098119 | None:intergenic | 25.0% |
! | ATTTATTTATTGATAGGCTC+GGG | - | Chr8:80098652-80098671 | MsG0880046930.01.T01:intron | 25.0% |
! | CAAAAATAAAACCACAAATC+AGG | + | Chr8:80098774-80098793 | None:intergenic | 25.0% |
! | CAAACCATAATTGAAAAGAA+GGG | + | Chr8:80099343-80099362 | None:intergenic | 25.0% |
! | CTAGCTGGTATTATTAATTA+GGG | - | Chr8:80100499-80100518 | MsG0880046930.01.T01:CDS | 25.0% |
! | GAAATATTATGATAAGGAAG+AGG | + | Chr8:80098743-80098762 | None:intergenic | 25.0% |
! | GATTTATTTATTGATAGGCT+CGG | - | Chr8:80098651-80098670 | MsG0880046930.01.T01:intron | 25.0% |
! | GTAATTACCTATATATGTGT+AGG | + | Chr8:80100480-80100499 | None:intergenic | 25.0% |
! | TAGATGACAGAGAAAAATAA+TGG | + | Chr8:80097491-80097510 | None:intergenic | 25.0% |
! | TATCCAATCACATAATACAA+TGG | - | Chr8:80100207-80100226 | MsG0880046930.01.T01:intron | 25.0% |
! | TCAATTATAGTTTCCAAAAG+TGG | + | Chr8:80098041-80098060 | None:intergenic | 25.0% |
! | TGTGTTTGTTTCATTAGTAT+TGG | + | Chr8:80097348-80097367 | None:intergenic | 25.0% |
! | TTACTATTACAAATTGCAAC+AGG | + | Chr8:80098973-80098992 | None:intergenic | 25.0% |
!! | AATTTTCAGTGAAAGATTAG+AGG | - | Chr8:80097877-80097896 | MsG0880046930.01.T01:intron | 25.0% |
!! | ATTTTATTCATCCCTTTCTT+TGG | - | Chr8:80097547-80097566 | MsG0880046930.01.T01:three_prime_UTR | 25.0% |
!! | GAAAAATAATGGAAAAACAG+AGG | + | Chr8:80097480-80097499 | None:intergenic | 25.0% |
!! | TAGTGCAGTTATCTTTTAAA+GGG | - | Chr8:80099107-80099126 | MsG0880046930.01.T01:intron | 25.0% |
!! | TATTAAATTGGTTTCTCTGA+AGG | - | Chr8:80097685-80097704 | MsG0880046930.01.T01:intron | 25.0% |
!! | TGAGATATTTTCCAAAGAAA+GGG | + | Chr8:80097561-80097580 | None:intergenic | 25.0% |
!! | TTAGTGCAGTTATCTTTTAA+AGG | - | Chr8:80099106-80099125 | MsG0880046930.01.T01:intron | 25.0% |
!! | TTGAGATATTTTCCAAAGAA+AGG | + | Chr8:80097562-80097581 | None:intergenic | 25.0% |
!! | TTTCCACGTTGTAAATTTTT+AGG | + | Chr8:80099875-80099894 | None:intergenic | 25.0% |
!!! | ATCAATTTTTGGTACATGAT+AGG | + | Chr8:80099005-80099024 | None:intergenic | 25.0% |
!!! | ATTAGTTTTGGATGATTCAA+TGG | - | Chr8:80099555-80099574 | MsG0880046930.01.T01:CDS | 25.0% |
!!! | ATTTATCATTTTTGCCTTTC+TGG | + | Chr8:80099072-80099091 | None:intergenic | 25.0% |
!!! | CAAAAATTGATTGGTTTGAT+GGG | - | Chr8:80099014-80099033 | MsG0880046930.01.T01:CDS | 25.0% |
!!! | CAACTTTTGAAAAAGAAACA+AGG | + | Chr8:80099286-80099305 | None:intergenic | 25.0% |
!!! | GTTAATTCTTCTTTTAAGGA+TGG | - | Chr8:80098466-80098485 | MsG0880046930.01.T01:intron | 25.0% |
!!! | TCAATTTTTGGTACATGATA+GGG | + | Chr8:80099004-80099023 | None:intergenic | 25.0% |
!!! | TCTTTGGTTTTATTCATATG+TGG | - | Chr8:80098598-80098617 | MsG0880046930.01.T01:intron | 25.0% |
AAAGTTGTTTGTAGCGAATA+GGG | + | Chr8:80097386-80097405 | None:intergenic | 30.0% | |
AAGAAGATGATAAGAAGAAG+AGG | + | Chr8:80097253-80097272 | None:intergenic | 30.0% | |
AAGCCATTGTATTATGTGAT+TGG | + | Chr8:80100213-80100232 | None:intergenic | 30.0% | |
AAGTATCATTAATGGGATGA+TGG | - | Chr8:80100400-80100419 | MsG0880046930.01.T01:CDS | 30.0% | |
AATAAAGTCCATCCAATCAA+AGG | + | Chr8:80099901-80099920 | None:intergenic | 30.0% | |
AATAGCTTCTCATAATGCAT+GGG | - | Chr8:80099149-80099168 | MsG0880046930.01.T01:CDS | 30.0% | |
AGGGGAGAAATATTATGATA+AGG | + | Chr8:80098749-80098768 | None:intergenic | 30.0% | |
AGTTTAGCCTACACATATAT+AGG | - | Chr8:80100470-80100489 | MsG0880046930.01.T01:CDS | 30.0% | |
ATAAAGTCCATCCAATCAAA+GGG | + | Chr8:80099900-80099919 | None:intergenic | 30.0% | |
ATAAGTTCTTCTCCCAAAAT+TGG | - | Chr8:80099803-80099822 | MsG0880046930.01.T01:intron | 30.0% | |
ATATTATGATAAGGAAGAGG+AGG | + | Chr8:80098740-80098759 | None:intergenic | 30.0% | |
CAATTGTTAAAAGTTAACCC+AGG | + | Chr8:80098632-80098651 | None:intergenic | 30.0% | |
CGATAGAAAATAGAGTAACT+TGG | + | Chr8:80100602-80100621 | None:intergenic | 30.0% | |
CTTCCTTAACACAACAATAT+GGG | - | Chr8:80097270-80097289 | MsG0880046930.01.T01:three_prime_UTR | 30.0% | |
GAAACTAATCGGTAAATTGA+GGG | + | Chr8:80098361-80098380 | None:intergenic | 30.0% | |
GAACAAACAATCAAAAGACA+AGG | + | Chr8:80098553-80098572 | None:intergenic | 30.0% | |
GAATGATAAAACAGATGTAG+TGG | + | Chr8:80099965-80099984 | None:intergenic | 30.0% | |
GCAAACCATAATTGAAAAGA+AGG | + | Chr8:80099344-80099363 | None:intergenic | 30.0% | |
GGCAAACTAGTTAAGTAAAT+AGG | + | Chr8:80099322-80099341 | None:intergenic | 30.0% | |
GTGTTTGTATCATGAAATAC+AGG | + | Chr8:80100014-80100033 | None:intergenic | 30.0% | |
TAAAAAGAGAGGATTAATGC+CGG | - | Chr8:80099391-80099410 | MsG0880046930.01.T01:intron | 30.0% | |
TAATAGCTTCTCATAATGCA+TGG | - | Chr8:80099148-80099167 | MsG0880046930.01.T01:CDS | 30.0% | |
TACTAATGAAACAAACACAG+AGG | - | Chr8:80097349-80097368 | MsG0880046930.01.T01:three_prime_UTR | 30.0% | |
TATTCGCTACAAACAACTTT+GGG | - | Chr8:80097386-80097405 | MsG0880046930.01.T01:three_prime_UTR | 30.0% | |
TCAGCGACAAATTTATGTAT+TGG | + | Chr8:80099727-80099746 | None:intergenic | 30.0% | |
TCTGAATGATGTTCAAATTC+CGG | - | Chr8:80098281-80098300 | MsG0880046930.01.T01:intron | 30.0% | |
TCTTCCTTAACACAACAATA+TGG | - | Chr8:80097269-80097288 | MsG0880046930.01.T01:three_prime_UTR | 30.0% | |
TGAAACTAATCGGTAAATTG+AGG | + | Chr8:80098362-80098381 | None:intergenic | 30.0% | |
TTAACATAAAGTACAGCCTA+AGG | + | Chr8:80098451-80098470 | None:intergenic | 30.0% | |
TTATAATTCCCATGTTACCA+AGG | + | Chr8:80099787-80099806 | None:intergenic | 30.0% | |
TTTGATGAGATTCTGATGAA+TGG | - | Chr8:80097965-80097984 | MsG0880046930.01.T01:CDS | 30.0% | |
! | AAAATGTTTTCGTTTTGCCT+TGG | - | Chr8:80099767-80099786 | MsG0880046930.01.T01:intron | 30.0% |
! | AAAGACAAGGTGCTAAAATA+AGG | + | Chr8:80098540-80098559 | None:intergenic | 30.0% |
! | AACAGATGTAGTGGAATAAA+TGG | + | Chr8:80099956-80099975 | None:intergenic | 30.0% |
! | AGAGACACTAATTTGTGTAA+AGG | + | Chr8:80097718-80097737 | None:intergenic | 30.0% |
! | CCATCAAACCAATCAATTTT+TGG | + | Chr8:80099016-80099035 | None:intergenic | 30.0% |
! | TTTGCCCTTCTTTTCAATTA+TGG | - | Chr8:80099336-80099355 | MsG0880046930.01.T01:intron | 30.0% |
!! | AGTTTGTTAGAACAACAATC+TGG | - | Chr8:80097763-80097782 | MsG0880046930.01.T01:intron | 30.0% |
!! | ATATTCTGGCTTAAAAAGAG+AGG | - | Chr8:80099380-80099399 | MsG0880046930.01.T01:intron | 30.0% |
!! | CCAAAAATTGATTGGTTTGA+TGG | - | Chr8:80099013-80099032 | MsG0880046930.01.T01:CDS | 30.0% |
!! | TCTCTTTTTAAGCCAGAATA+TGG | + | Chr8:80099381-80099400 | None:intergenic | 30.0% |
!!! | TCTTCTCCTCTTATTTTCTT+CGG | + | Chr8:80097315-80097334 | None:intergenic | 30.0% |
!!! | TGATTTGTTTTGCTTCTCTT+TGG | - | Chr8:80098582-80098601 | MsG0880046930.01.T01:intron | 30.0% |
AAAAAGAGAGGATTAATGCC+GGG | - | Chr8:80099392-80099411 | MsG0880046930.01.T01:intron | 35.0% | |
AAAATCTTCCTTGTGTTGCA+AGG | - | Chr8:80098870-80098889 | MsG0880046930.01.T01:intron | 35.0% | |
AAAGGGCAAAAAAGAAAAGC+GGG | + | Chr8:80099835-80099854 | None:intergenic | 35.0% | |
AATCTGATGTTGTACACCTT+AGG | - | Chr8:80098432-80098451 | MsG0880046930.01.T01:CDS | 35.0% | |
AATGCTTAAAACACTACCTC+CGG | + | Chr8:80098303-80098322 | None:intergenic | 35.0% | |
ACAAATTCATGCCAATGTCA+TGG | + | Chr8:80100554-80100573 | None:intergenic | 35.0% | |
ACACAACAATATGGGTTCTT+TGG | - | Chr8:80097278-80097297 | MsG0880046930.01.T01:three_prime_UTR | 35.0% | |
AGCAACTTGTATCTTTGTTC+CGG | - | Chr8:80097188-80097207 | MsG0880046930.01.T01:three_prime_UTR | 35.0% | |
ATAAAACCACAAATCAGGCA+AGG | + | Chr8:80098769-80098788 | None:intergenic | 35.0% | |
ATAAATTGAAGACTGAGCAG+TGG | - | Chr8:80098409-80098428 | MsG0880046930.01.T01:CDS | 35.0% | |
CAAAGTTGTTTGTAGCGAAT+AGG | + | Chr8:80097387-80097406 | None:intergenic | 35.0% | |
CATGCTATACAGGTAGTATT+TGG | - | Chr8:80099475-80099494 | MsG0880046930.01.T01:intron | 35.0% | |
CTATGAATAAACTGCCAAGT+AGG | - | Chr8:80098947-80098966 | MsG0880046930.01.T01:CDS | 35.0% | |
CTATTCGCTACAAACAACTT+TGG | - | Chr8:80097385-80097404 | MsG0880046930.01.T01:three_prime_UTR | 35.0% | |
GAAAGGGCAAAAAAGAAAAG+CGG | + | Chr8:80099836-80099855 | None:intergenic | 35.0% | |
GAACCCATATTGTTGTGTTA+AGG | + | Chr8:80097276-80097295 | None:intergenic | 35.0% | |
GACAATGAACACATGATGTT+TGG | - | Chr8:80097815-80097834 | MsG0880046930.01.T01:intron | 35.0% | |
GCAAAACAAATCACAACTCT+AGG | + | Chr8:80098575-80098594 | None:intergenic | 35.0% | |
GCAATCGAGAATATTCATTC+TGG | - | Chr8:80098695-80098714 | MsG0880046930.01.T01:intron | 35.0% | |
GTGAAAGATTAGAGGATTTC+CGG | - | Chr8:80097885-80097904 | MsG0880046930.01.T01:intron | 35.0% | |
GTGCCTAAAAATTTACAACG+TGG | - | Chr8:80099869-80099888 | MsG0880046930.01.T01:intron | 35.0% | |
GTTTCACATACTACTTGCTT+TGG | - | Chr8:80098376-80098395 | MsG0880046930.01.T01:CDS | 35.0% | |
TAAAACCACAAATCAGGCAA+GGG | + | Chr8:80098768-80098787 | None:intergenic | 35.0% | |
TACATAAATTTGTCGCTGAC+AGG | - | Chr8:80099728-80099747 | MsG0880046930.01.T01:intron | 35.0% | |
TCCATCAGATGTAGCAAAAA+AGG | + | Chr8:80098232-80098251 | None:intergenic | 35.0% | |
TTATAGTTTCCAAAAGTGGC+TGG | + | Chr8:80098037-80098056 | None:intergenic | 35.0% | |
! | AAGGGATATTTTTCTCAGGA+AGG | - | Chr8:80099222-80099241 | MsG0880046930.01.T01:intron | 35.0% |
! | AATATGGGTTCTTTGGAGAA+TGG | - | Chr8:80097285-80097304 | MsG0880046930.01.T01:three_prime_UTR | 35.0% |
! | ACTTTGGGAGATGTACAAAA+AGG | - | Chr8:80097401-80097420 | MsG0880046930.01.T01:three_prime_UTR | 35.0% |
! | ATTTTGCTTGCATGCTATAC+AGG | - | Chr8:80099465-80099484 | MsG0880046930.01.T01:intron | 35.0% |
! | GTTGAAGGGATATTTTTCTC+AGG | - | Chr8:80099218-80099237 | MsG0880046930.01.T01:intron | 35.0% |
! | TACATCTGATGGAATCGTTT+TGG | - | Chr8:80098239-80098258 | MsG0880046930.01.T01:intron | 35.0% |
!! | CTTTTCTTTTTTGCCCTTTC+AGG | - | Chr8:80099836-80099855 | MsG0880046930.01.T01:intron | 35.0% |
!! | GTTTTGGATGACGTTGTATA+AGG | - | Chr8:80099517-80099536 | MsG0880046930.01.T01:intron | 35.0% |
!! | TATGTATTGGCTCATAAGCT+TGG | + | Chr8:80099714-80099733 | None:intergenic | 35.0% |
!!! | AACTTTTTTGAGAGAAGGGT+GGG | - | Chr8:80100269-80100288 | MsG0880046930.01.T01:intron | 35.0% |
!!! | CTTTGTTTTCAAGCTTGATG+AGG | - | Chr8:80100343-80100362 | MsG0880046930.01.T01:intron | 35.0% |
!!! | TGGAATCGTTTTGGAGAATT+TGG | - | Chr8:80098248-80098267 | MsG0880046930.01.T01:intron | 35.0% |
AAAACCACAAATCAGGCAAG+GGG | + | Chr8:80098767-80098786 | None:intergenic | 40.0% | |
AAACCCTTTGCTCTGTTATC+CGG | + | Chr8:80097210-80097229 | None:intergenic | 40.0% | |
AACATGATTGAGCAGAGGAA+AGG | - | Chr8:80100244-80100263 | MsG0880046930.01.T01:intron | 40.0% | |
AATGATAAATCTCGGCGTTC+TGG | - | Chr8:80099082-80099101 | MsG0880046930.01.T01:intron | 40.0% | |
ACGTGGAAAATCCCTTTGAT+TGG | - | Chr8:80099886-80099905 | MsG0880046930.01.T01:intron | 40.0% | |
AGTTCTTCTCCCAAAATTGG+TGG | - | Chr8:80099806-80099825 | MsG0880046930.01.T01:intron | 40.0% | |
CAAAGTTCTTCCCATCATCT+TGG | + | Chr8:80100328-80100347 | None:intergenic | 40.0% | |
CACCCTTCTCTCAAAAAAGT+TGG | + | Chr8:80100270-80100289 | None:intergenic | 40.0% | |
CAGATGTAGCAAAAAAGGCA+AGG | + | Chr8:80098227-80098246 | None:intergenic | 40.0% | |
CTCCTATGATGTACAACACT+GGG | - | Chr8:80098161-80098180 | MsG0880046930.01.T01:CDS | 40.0% | |
GAATGATGTTCAAATTCCGG+AGG | - | Chr8:80098284-80098303 | MsG0880046930.01.T01:intron | 40.0% | |
GGAAAATCCCTTTGATTGGA+TGG | - | Chr8:80099890-80099909 | MsG0880046930.01.T01:intron | 40.0% | |
GTTCTGTTGTTCCATGACAT+TGG | - | Chr8:80100540-80100559 | MsG0880046930.01.T01:exon | 40.0% | |
TATGCAACATGATTGAGCAG+AGG | - | Chr8:80100239-80100258 | MsG0880046930.01.T01:intron | 40.0% | |
TCATGCCAATCAATGCACAA+GGG | + | Chr8:80099688-80099707 | None:intergenic | 40.0% | |
TCATTTGAGAATGTCAGACC+CGG | + | Chr8:80099413-80099432 | None:intergenic | 40.0% | |
TCTCCTATGATGTACAACAC+TGG | - | Chr8:80098160-80098179 | MsG0880046930.01.T01:CDS | 40.0% | |
TGAGACAGCTAGATTTCGAA+CGG | - | Chr8:80099603-80099622 | MsG0880046930.01.T01:CDS | 40.0% | |
TGTCTTTATGGCTGCCAAAA+CGG | - | Chr8:80100576-80100595 | MsG0880046930.01.T01:five_prime_UTR | 40.0% | |
TTCAAAAGACACTCTGCAGT+CGG | + | Chr8:80097859-80097878 | None:intergenic | 40.0% | |
TTCATGCCAATCAATGCACA+AGG | + | Chr8:80099689-80099708 | None:intergenic | 40.0% | |
! | ACAGAGCAAAGGGTTTTTGA+AGG | - | Chr8:80097214-80097233 | MsG0880046930.01.T01:three_prime_UTR | 40.0% |
! | ATAGAGTAACTTGGCCGTTT+TGG | + | Chr8:80100593-80100612 | None:intergenic | 40.0% |
! | CAGAGCAAAGGGTTTTTGAA+GGG | - | Chr8:80097215-80097234 | MsG0880046930.01.T01:three_prime_UTR | 40.0% |
! | TATGAAGTGCTTCTCAGAGT+CGG | + | Chr8:80098196-80098215 | None:intergenic | 40.0% |
! | TGGGATGATGGTGATGTATT+CGG | - | Chr8:80100412-80100431 | MsG0880046930.01.T01:CDS | 40.0% |
!! | AGAGATGTATAGCTTGCTGT+TGG | - | Chr8:80098796-80098815 | MsG0880046930.01.T01:intron | 40.0% |
!! | CATGTGTTCAAGTTGTACAC+CGG | + | Chr8:80097907-80097926 | None:intergenic | 40.0% |
!! | GTAAATTTTTAGGCACCCCA+AGG | + | Chr8:80099865-80099884 | None:intergenic | 40.0% |
!! | TCGTTTTGCCTTGGTAACAT+GGG | - | Chr8:80099776-80099795 | MsG0880046930.01.T01:intron | 40.0% |
!! | TTCGTTTTGCCTTGGTAACA+TGG | - | Chr8:80099775-80099794 | MsG0880046930.01.T01:intron | 40.0% |
!! | TTGGCTTTGCATGTGTTGAA+GGG | - | Chr8:80099204-80099223 | MsG0880046930.01.T01:intron | 40.0% |
!! | TTTTGGAGAATTTGGCTGCA+AGG | - | Chr8:80098256-80098275 | MsG0880046930.01.T01:intron | 40.0% |
!!! | AGGCCAACTTTTTTGAGAGA+AGG | - | Chr8:80100264-80100283 | MsG0880046930.01.T01:intron | 40.0% |
!!! | CAACTTTTTTGAGAGAAGGG+TGG | - | Chr8:80100268-80100287 | MsG0880046930.01.T01:intron | 40.0% |
!!! | GCCTTTTTTGCTACATCTGA+TGG | - | Chr8:80098228-80098247 | MsG0880046930.01.T01:intron | 40.0% |
!!! | GGCCAACTTTTTTGAGAGAA+GGG | - | Chr8:80100265-80100284 | MsG0880046930.01.T01:intron | 40.0% |
AAAAGGCTGAAGCCAGTTTC+TGG | - | Chr8:80097418-80097437 | MsG0880046930.01.T01:three_prime_UTR | 45.0% | |
AAGGGTGGGTGATTATCAGA+AGG | - | Chr8:80100283-80100302 | MsG0880046930.01.T01:intron | 45.0% | |
AAGTCTCTCCGCAAATGAAG+TGG | + | Chr8:80099183-80099202 | None:intergenic | 45.0% | |
AGTTCTTCCCATCATCTTGG+AGG | + | Chr8:80100325-80100344 | None:intergenic | 45.0% | |
ATACACTGGCAACACCAGAA+AGG | - | Chr8:80099055-80099074 | MsG0880046930.01.T01:intron | 45.0% | |
ATGTCAAGCCTCCAAGATGA+TGG | - | Chr8:80100314-80100333 | MsG0880046930.01.T01:intron | 45.0% | |
ATTTGTCGCTGACAGGCTAT+TGG | - | Chr8:80099735-80099754 | MsG0880046930.01.T01:intron | 45.0% | |
CAAATTGCAACAGGCCTACT+TGG | + | Chr8:80098964-80098983 | None:intergenic | 45.0% | |
CGGTGTACAACTTGAACACA+TGG | - | Chr8:80097905-80097924 | MsG0880046930.01.T01:intron | 45.0% | |
CTGCAGTTCCACTTCATTTG+CGG | - | Chr8:80099172-80099191 | MsG0880046930.01.T01:intron | 45.0% | |
GAGACAGCTAGATTTCGAAC+GGG | - | Chr8:80099604-80099623 | MsG0880046930.01.T01:CDS | 45.0% | |
GGAACGCCGAAGAAAATAAG+AGG | - | Chr8:80097306-80097325 | MsG0880046930.01.T01:three_prime_UTR | 45.0% | |
GTTCCGGATAACAGAGCAAA+GGG | - | Chr8:80097204-80097223 | MsG0880046930.01.T01:three_prime_UTR | 45.0% | |
TCAGCTTCTGTGCCATATTC+TGG | - | Chr8:80099366-80099385 | MsG0880046930.01.T01:intron | 45.0% | |
TCATTTGCGGAGAGACTTGT+TGG | - | Chr8:80099185-80099204 | MsG0880046930.01.T01:intron | 45.0% | |
TCTTCCTTGTGTTGCAAGGA+AGG | - | Chr8:80098874-80098893 | MsG0880046930.01.T01:intron | 45.0% | |
TGCCCAGTGTTGTACATCAT+AGG | + | Chr8:80098166-80098185 | None:intergenic | 45.0% | |
TGTCAAGCCTCCAAGATGAT+GGG | - | Chr8:80100315-80100334 | MsG0880046930.01.T01:intron | 45.0% | |
TGTTCCGGATAACAGAGCAA+AGG | - | Chr8:80097203-80097222 | MsG0880046930.01.T01:three_prime_UTR | 45.0% | |
TGTTGCAAGGAAGGCTGAAT+GGG | - | Chr8:80098883-80098902 | MsG0880046930.01.T01:intron | 45.0% | |
! | AAGCGGGTAACCACCAATTT+TGG | + | Chr8:80099819-80099838 | None:intergenic | 45.0% |
! | AAGTTGGTTGACAGCTGAAG+AGG | - | Chr8:80098131-80098150 | MsG0880046930.01.T01:CDS | 45.0% |
! | AGCGGGTAACCACCAATTTT+GGG | + | Chr8:80099818-80099837 | None:intergenic | 45.0% |
! | GAGCTAATCTCTAGAGACGA+GGG | - | Chr8:80099431-80099450 | MsG0880046930.01.T01:intron | 45.0% |
! | TGAGCTAATCTCTAGAGACG+AGG | - | Chr8:80099430-80099449 | MsG0880046930.01.T01:intron | 45.0% |
!! | GGGCATTGAGTTGGATTAAC+AGG | - | Chr8:80098903-80098922 | MsG0880046930.01.T01:intron | 45.0% |
!! | GTTGGCTTTGCATGTGTTGA+AGG | - | Chr8:80099203-80099222 | MsG0880046930.01.T01:intron | 45.0% |
!! | TTGCCCTTTCAGGTTTCCTT+GGG | - | Chr8:80099846-80099865 | MsG0880046930.01.T01:intron | 45.0% |
!! | TTTCCAAAAGTGGCTGGCTT+TGG | + | Chr8:80098031-80098050 | None:intergenic | 45.0% |
!! | TTTGCCCTTTCAGGTTTCCT+TGG | - | Chr8:80099845-80099864 | MsG0880046930.01.T01:intron | 45.0% |
!!! | CTGGTGTTGCCAGTGTATTT+TGG | + | Chr8:80099053-80099072 | None:intergenic | 45.0% |
CACCCCAAGGAAACCTGAAA+GGG | + | Chr8:80099852-80099871 | None:intergenic | 50.0% | |
CATATGTGGCAGCACTTCCT+GGG | - | Chr8:80098612-80098631 | MsG0880046930.01.T01:intron | 50.0% | |
CTGTCTCAGTAACAAGCTGC+AGG | + | Chr8:80099591-80099610 | None:intergenic | 50.0% | |
GCCAATCAATGCACAAGGGA+GGG | + | Chr8:80099684-80099703 | None:intergenic | 50.0% | |
GTGTTGCAAGGAAGGCTGAA+TGG | - | Chr8:80098882-80098901 | MsG0880046930.01.T01:intron | 50.0% | |
TCAGCCTTCCTTGCAACACA+AGG | + | Chr8:80098881-80098900 | None:intergenic | 50.0% | |
TCATATGTGGCAGCACTTCC+TGG | - | Chr8:80098611-80098630 | MsG0880046930.01.T01:intron | 50.0% | |
TGATAGGCTCGGGCATTCTA+TGG | - | Chr8:80098662-80098681 | MsG0880046930.01.T01:intron | 50.0% | |
TGCCAATCAATGCACAAGGG+AGG | + | Chr8:80099685-80099704 | None:intergenic | 50.0% | |
! | GTATGTACCGGTCCAGAAAC+TGG | + | Chr8:80097433-80097452 | None:intergenic | 50.0% |
! | TTCTCCCCTTGCCTGATTTG+TGG | - | Chr8:80098760-80098779 | MsG0880046930.01.T01:intron | 50.0% |
!! | AGGCTGAATGGGCATTGAGT+TGG | - | Chr8:80098894-80098913 | MsG0880046930.01.T01:intron | 50.0% |
!! | GAGGGCATCACAGACAAACT+CGG | + | Chr8:80099666-80099685 | None:intergenic | 50.0% |
!! | TGCCCTTTCAGGTTTCCTTG+GGG | - | Chr8:80099847-80099866 | MsG0880046930.01.T01:intron | 50.0% |
!! | TTGCCAAAGCCAGCCACTTT+TGG | - | Chr8:80098025-80098044 | MsG0880046930.01.T01:CDS | 50.0% |
!!! | GTTGCCAGTGTATTTTGGCC+TGG | + | Chr8:80099048-80099067 | None:intergenic | 50.0% |
CCTGCCAGGCCAAAATACAC+TGG | - | Chr8:80099041-80099060 | MsG0880046930.01.T01:intron | 55.0% | |
GCACCCCAAGGAAACCTGAA+AGG | + | Chr8:80099853-80099872 | None:intergenic | 55.0% | |
GTGCTTCTCAGAGTCGGACA+AGG | + | Chr8:80098190-80098209 | None:intergenic | 55.0% | |
! | GCCCTCCCTTGTGCATTGAT+TGG | - | Chr8:80099680-80099699 | MsG0880046930.01.T01:intron | 55.0% |
! | GCTGAAGCCAGTTTCTGGAC+CGG | - | Chr8:80097423-80097442 | MsG0880046930.01.T01:three_prime_UTR | 55.0% |
!!! | CCAGTGTATTTTGGCCTGGC+AGG | + | Chr8:80099044-80099063 | None:intergenic | 55.0% |
!!! | TGTATTTTGGCCTGGCAGGC+TGG | + | Chr8:80099040-80099059 | None:intergenic | 55.0% |
CACTCTGCAGTCGGAGACGT+AGG | + | Chr8:80097850-80097869 | None:intergenic | 60.0% | |
! | GTTTGATGGGCCAGCCTGCC+AGG | - | Chr8:80099027-80099046 | MsG0880046930.01.T01:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 80097175 | 80100662 | 80097175 | ID=MsG0880046930.01;Name=MsG0880046930.01 |
Chr8 | mRNA | 80097175 | 80100662 | 80097175 | ID=MsG0880046930.01.T01;Parent=MsG0880046930.01;Name=MsG0880046930.01.T01;_AED=0.37;_eAED=0.37;_QI=113|0.83|1|1|0.83|0.71|7|428|306 |
Chr8 | exon | 80097175 | 80097578 | 80097175 | ID=MsG0880046930.01.T01:exon:34536;Parent=MsG0880046930.01.T01 |
Chr8 | exon | 80097909 | 80098242 | 80097909 | ID=MsG0880046930.01.T01:exon:34535;Parent=MsG0880046930.01.T01 |
Chr8 | exon | 80098351 | 80098467 | 80098351 | ID=MsG0880046930.01.T01:exon:34534;Parent=MsG0880046930.01.T01 |
Chr8 | exon | 80098913 | 80099039 | 80098913 | ID=MsG0880046930.01.T01:exon:34533;Parent=MsG0880046930.01.T01 |
Chr8 | exon | 80099121 | 80099169 | 80099121 | ID=MsG0880046930.01.T01:exon:34532;Parent=MsG0880046930.01.T01 |
Chr8 | exon | 80099532 | 80099692 | 80099532 | ID=MsG0880046930.01.T01:exon:34531;Parent=MsG0880046930.01.T01 |
Chr8 | exon | 80100393 | 80100662 | 80100393 | ID=MsG0880046930.01.T01:exon:34530;Parent=MsG0880046930.01.T01 |
Chr8 | five_prime_UTR | 80100550 | 80100662 | 80100550 | ID=MsG0880046930.01.T01:five_prime_utr;Parent=MsG0880046930.01.T01 |
Chr8 | CDS | 80100393 | 80100549 | 80100393 | ID=MsG0880046930.01.T01:cds;Parent=MsG0880046930.01.T01 |
Chr8 | CDS | 80099532 | 80099692 | 80099532 | ID=MsG0880046930.01.T01:cds;Parent=MsG0880046930.01.T01 |
Chr8 | CDS | 80099121 | 80099169 | 80099121 | ID=MsG0880046930.01.T01:cds;Parent=MsG0880046930.01.T01 |
Chr8 | CDS | 80098913 | 80099039 | 80098913 | ID=MsG0880046930.01.T01:cds;Parent=MsG0880046930.01.T01 |
Chr8 | CDS | 80098351 | 80098467 | 80098351 | ID=MsG0880046930.01.T01:cds;Parent=MsG0880046930.01.T01 |
Chr8 | CDS | 80097933 | 80098242 | 80097933 | ID=MsG0880046930.01.T01:cds;Parent=MsG0880046930.01.T01 |
Chr8 | three_prime_UTR | 80097909 | 80097932 | 80097909 | ID=MsG0880046930.01.T01:three_prime_utr;Parent=MsG0880046930.01.T01 |
Chr8 | three_prime_UTR | 80097175 | 80097578 | 80097175 | ID=MsG0880046930.01.T01:three_prime_utr;Parent=MsG0880046930.01.T01 |
Gene Sequence |
Protein sequence |