AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009885.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009885.01.T01 MTR_2g072730 86.695 466 58 3 52 516 1 463 0.0 783
MsG0280009885.01.T01 MTR_2g072720 62.190 484 162 6 45 515 6 481 0.0 553
MsG0280009885.01.T01 MTR_4g032845 60.225 445 169 7 66 506 2 442 2.40e-169 486
MsG0280009885.01.T01 MTR_1g025870 43.580 514 201 18 57 494 11 511 7.56e-97 303
MsG0280009885.01.T01 MTR_6g022350 41.113 467 204 12 66 472 5 460 1.13e-88 281
MsG0280009885.01.T01 MTR_2g072710 67.935 184 56 1 327 510 18 198 1.32e-74 234
MsG0280009885.01.T01 MTR_5g005700 37.759 482 253 14 64 513 28 494 7.76e-71 234
MsG0280009885.01.T01 MTR_5g007090 35.897 468 238 15 63 499 25 461 2.55e-66 223
MsG0280009885.01.T01 MTR_8g006910 37.011 435 226 16 58 475 38 441 1.53e-65 221
MsG0280009885.01.T01 MTR_2g067210 41.007 417 196 19 30 416 7 403 1.39e-60 207
MsG0280009885.01.T01 MTR_7g094030 35.837 466 241 18 64 502 25 459 2.10e-60 206
MsG0280009885.01.T01 MTR_1g115250 36.682 428 223 17 60 473 23 416 6.67e-55 191
MsG0280009885.01.T01 MTR_3g018680 33.479 457 208 18 58 494 8 388 3.45e-52 182
MsG0280009885.01.T01 MTR_2g072530 32.658 444 273 14 63 496 9 436 6.64e-52 183
MsG0280009885.01.T01 MTR_2g082800 36.408 412 227 15 57 460 17 401 1.07e-49 176
MsG0280009885.01.T01 MTR_5g007130 33.619 467 212 15 52 494 1 393 2.43e-48 172
MsG0280009885.01.T01 MTR_2g082880 33.726 424 233 18 65 471 8 400 2.83e-46 167
MsG0280009885.01.T01 MTR_2g072650 39.382 259 105 4 256 513 32 239 1.69e-41 149
MsG0280009885.01.T01 MTR_2g082850 33.871 372 207 13 59 412 14 364 1.60e-40 150
MsG0280009885.01.T01 MTR_1g115245 38.433 268 143 10 60 323 19 268 5.46e-36 136
MsG0280009885.01.T01 MTR_6g022330 40.684 263 122 9 127 381 133 369 4.18e-33 134
MsG0280009885.01.T01 MTR_2g082780 38.967 213 108 9 72 278 17 213 8.17e-29 114
MsG0280009885.01.T01 MTR_5g007110 51.818 110 51 2 386 494 1 109 3.27e-25 100
MsG0280009885.01.T01 MTR_5g063450 32.248 307 175 10 51 356 11 285 4.16e-22 98.2
MsG0280009885.01.T01 MTR_4g080787 25.910 467 276 22 60 489 13 446 1.32e-19 92.0
MsG0280009885.01.T01 MTR_7g094050 40.000 120 69 2 375 492 2 120 8.94e-19 82.8
MsG0280009885.01.T01 MTR_2g082860 42.000 100 45 3 48 139 2 96 2.14e-15 73.2
MsG0280009885.01.T01 MTR_5g005690 28.444 225 133 9 69 285 23 227 1.54e-14 76.3
MsG0280009885.01.T01 MTR_7g023310 23.690 439 277 17 60 470 17 425 2.05e-14 75.9
MsG0280009885.01.T01 MTR_7g075820 40.496 121 60 3 66 179 5 120 5.30e-14 74.3
MsG0280009885.01.T01 MTR_8g468840 22.222 477 279 16 66 497 13 442 3.92e-13 72.0
MsG0280009885.01.T01 MTR_3g108560 24.208 442 229 17 66 487 19 374 8.28e-13 70.5
MsG0280009885.01.T01 MTR_5g080710 32.877 146 88 3 54 195 20 159 2.04e-12 69.7
MsG0280009885.01.T01 MTR_8g467800 23.158 475 291 18 66 506 19 453 2.54e-12 69.3
MsG0280009885.01.T01 MTR_0049s0110 28.743 167 105 6 64 225 5 162 4.82e-12 67.0
MsG0280009885.01.T01 MTR_0049s0110 28.743 167 105 6 64 225 5 162 7.04e-12 67.8
MsG0280009885.01.T01 MTR_0049s0110 29.341 167 104 7 64 225 5 162 7.17e-12 67.0
MsG0280009885.01.T01 MTR_0049s0110 29.341 167 104 7 64 225 5 162 8.01e-12 67.0
MsG0280009885.01.T01 MTR_8g468810 23.094 459 273 19 64 482 22 440 4.08e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009885.01.T01 AT3G14710 26.786 448 281 15 66 501 25 437 3.00e-24 105
MsG0280009885.01.T01 AT1G16930 25.618 445 272 14 60 473 8 424 1.07e-20 95.1
MsG0280009885.01.T01 AT1G16930 25.618 445 272 14 60 473 8 424 1.07e-20 95.1
MsG0280009885.01.T01 AT1G16930 25.618 445 272 14 60 473 8 424 1.07e-20 95.1
MsG0280009885.01.T01 AT3G58880 40.000 120 69 1 67 183 3 122 8.84e-20 92.4
MsG0280009885.01.T01 AT3G58860 34.559 136 82 2 67 195 7 142 2.61e-18 87.8
MsG0280009885.01.T01 AT5G38392 36.667 120 73 1 67 183 2 121 3.00e-18 84.0
MsG0280009885.01.T01 AT4G14103 35.878 131 79 2 64 190 5 134 1.31e-17 85.1
MsG0280009885.01.T01 AT4G14103 35.878 131 79 2 64 190 5 134 1.31e-17 85.1
MsG0280009885.01.T01 AT4G14103 35.878 131 79 2 64 190 5 134 1.81e-17 85.1
MsG0280009885.01.T01 AT4G14096 23.884 448 289 16 67 489 8 428 3.24e-17 84.7
MsG0280009885.01.T01 AT4G14096 23.884 448 289 16 67 489 8 428 3.24e-17 84.7
MsG0280009885.01.T01 AT3G59200 31.183 186 113 8 67 239 7 190 1.53e-16 81.6
MsG0280009885.01.T01 AT3G59200 26.115 471 283 24 67 496 7 453 1.67e-16 82.8
MsG0280009885.01.T01 AT5G38396 35.000 120 75 1 67 183 2 121 2.07e-16 82.0
MsG0280009885.01.T01 AT3G58900 37.069 116 70 1 67 179 2 117 3.39e-16 80.1
MsG0280009885.01.T01 AT3G59190 33.333 138 87 2 57 189 2 139 3.88e-16 80.9
MsG0280009885.01.T01 AT4G13960 36.434 129 73 2 67 192 2 124 4.12e-16 81.3
MsG0280009885.01.T01 AT4G13960 36.434 129 73 2 67 192 2 124 4.12e-16 81.3
MsG0280009885.01.T01 AT3G58900 37.069 116 70 1 67 179 2 117 4.59e-16 79.7
MsG0280009885.01.T01 AT3G58900 37.069 116 70 1 67 179 2 117 4.59e-16 79.7
MsG0280009885.01.T01 AT1G78760 22.887 485 268 18 52 487 1 428 6.12e-16 80.5
MsG0280009885.01.T01 AT3G59190 33.333 138 87 2 57 189 2 139 6.79e-16 80.9
MsG0280009885.01.T01 AT3G58900 37.069 116 70 1 67 179 2 117 8.61e-16 80.1
MsG0280009885.01.T01 AT3G59000 27.692 260 165 8 67 317 2 247 1.36e-15 78.6
MsG0280009885.01.T01 AT3G58940 28.571 210 130 6 67 263 2 204 3.38e-15 79.0
MsG0280009885.01.T01 AT3G58940 28.571 210 130 6 67 263 2 204 3.38e-15 79.0
MsG0280009885.01.T01 AT3G59240 25.397 441 270 16 66 470 7 424 8.58e-15 77.4
MsG0280009885.01.T01 AT3G03040 25.837 209 141 6 67 268 2 203 8.65e-15 77.0
MsG0280009885.01.T01 AT3G59000 35.345 116 72 1 67 179 2 117 2.27e-14 75.9
MsG0280009885.01.T01 AT3G03030 31.944 144 91 2 67 203 2 145 2.61e-14 74.7
MsG0280009885.01.T01 AT5G41840 38.983 118 67 4 67 179 14 131 3.31e-14 75.5
MsG0280009885.01.T01 AT3G58930 33.621 116 74 1 67 179 2 117 3.50e-14 75.5
MsG0280009885.01.T01 AT3G58930 33.621 116 74 1 67 179 2 117 3.50e-14 75.5
MsG0280009885.01.T01 AT3G58930 33.621 116 74 1 67 179 2 117 3.50e-14 75.5
MsG0280009885.01.T01 AT3G49150 34.615 130 80 2 50 179 3 127 4.52e-14 75.1
MsG0280009885.01.T01 AT3G03030 31.944 144 91 2 67 203 2 145 5.10e-14 74.7
MsG0280009885.01.T01 AT5G41830 29.609 179 109 4 55 217 1 178 1.33e-13 73.6
MsG0280009885.01.T01 AT5G56420 24.733 469 272 20 67 506 6 422 2.36e-13 72.4
MsG0280009885.01.T01 AT5G56420 24.733 469 272 20 67 506 6 422 2.36e-13 72.4
MsG0280009885.01.T01 AT5G56420 24.733 469 272 20 67 506 6 422 2.36e-13 72.4
MsG0280009885.01.T01 AT2G29910 33.333 147 83 3 62 207 24 156 3.43e-13 71.6
MsG0280009885.01.T01 AT2G29910 33.793 145 81 3 64 207 2 132 3.46e-13 71.2
MsG0280009885.01.T01 AT2G29910 33.793 145 81 3 64 207 2 132 3.46e-13 71.2
MsG0280009885.01.T01 AT2G29910 33.793 145 81 3 64 207 2 132 3.88e-13 71.2
MsG0280009885.01.T01 AT2G29910 33.793 145 81 3 64 207 2 132 3.88e-13 71.2
MsG0280009885.01.T01 AT2G29910 33.793 145 81 3 64 207 2 132 3.88e-13 71.2
MsG0280009885.01.T01 AT2G29910 33.793 145 81 3 64 207 2 132 3.88e-13 71.2
MsG0280009885.01.T01 AT4G27050 33.103 145 83 4 65 195 2 146 5.70e-13 71.2
MsG0280009885.01.T01 AT4G27050 33.103 145 83 4 65 195 2 146 5.70e-13 71.2
MsG0280009885.01.T01 AT4G27050 33.103 145 83 4 65 195 2 146 5.70e-13 71.2
MsG0280009885.01.T01 AT4G27050 33.103 145 83 4 65 195 2 146 5.70e-13 71.2
MsG0280009885.01.T01 AT4G27050 33.103 145 83 4 65 195 2 146 5.70e-13 71.2
MsG0280009885.01.T01 AT1G52650 31.897 116 76 1 67 179 2 117 6.19e-13 71.2
MsG0280009885.01.T01 AT1G69630 25.410 488 260 24 52 487 1 436 7.80e-13 70.9
MsG0280009885.01.T01 AT5G22730 30.769 143 82 3 64 197 25 159 7.82e-13 70.9
MsG0280009885.01.T01 AT5G22730 30.769 143 82 3 64 197 25 159 7.82e-13 70.9
MsG0280009885.01.T01 AT3G58820 34.483 116 73 1 67 179 2 117 7.99e-13 70.9
MsG0280009885.01.T01 AT2G29930 34.921 126 72 2 57 181 2 118 9.80e-13 70.9
MsG0280009885.01.T01 AT2G29930 34.921 126 72 2 57 181 2 118 9.80e-13 70.9
MsG0280009885.01.T01 AT5G22730 30.769 143 82 3 64 197 25 159 1.09e-12 70.1
MsG0280009885.01.T01 AT2G04230 31.847 157 103 2 60 216 6 158 1.46e-12 70.1
MsG0280009885.01.T01 AT1G58310 31.210 157 88 3 67 203 8 164 2.01e-12 69.7
MsG0280009885.01.T01 AT3G42770 31.250 192 103 6 72 249 4 180 3.30e-12 69.3
MsG0280009885.01.T01 AT3G44080 30.675 163 88 7 72 221 12 162 3.83e-12 68.6
MsG0280009885.01.T01 AT5G38386 29.921 127 86 1 67 190 2 128 4.09e-12 68.6
MsG0280009885.01.T01 AT5G38386 29.921 127 86 1 67 190 2 128 4.09e-12 68.6
MsG0280009885.01.T01 AT1G80470 23.025 443 269 19 60 470 7 409 4.24e-12 68.6
MsG0280009885.01.T01 AT4G10400 29.018 224 111 10 67 283 2 184 4.43e-12 68.6
MsG0280009885.01.T01 AT4G10400 29.018 224 111 10 67 283 2 184 4.43e-12 68.6
MsG0280009885.01.T01 AT4G10400 29.018 224 111 10 67 283 2 184 4.43e-12 68.6
MsG0280009885.01.T01 AT5G56370 24.714 437 248 17 67 476 2 384 4.48e-12 68.6
MsG0280009885.01.T01 AT5G56370 24.714 437 248 17 67 476 2 384 4.48e-12 68.6
MsG0280009885.01.T01 AT5G41630 33.858 127 79 2 57 179 2 127 4.72e-12 68.6
MsG0280009885.01.T01 AT4G26350 32.500 160 82 7 67 217 2 144 4.78e-12 68.6
MsG0280009885.01.T01 AT4G09920 28.571 224 112 10 67 283 2 184 6.80e-12 66.6
MsG0280009885.01.T01 AT4G09920 28.571 224 112 10 67 283 2 184 6.80e-12 66.6
MsG0280009885.01.T01 AT4G09920 28.571 224 112 10 67 283 2 184 6.80e-12 66.6
MsG0280009885.01.T01 AT1G49610 32.773 119 68 1 67 185 26 132 7.56e-12 67.4
MsG0280009885.01.T01 AT4G09920 28.571 224 112 10 67 283 2 184 9.64e-12 66.6
MsG0280009885.01.T01 AT4G09920 28.571 224 112 10 67 283 2 184 9.64e-12 66.6
MsG0280009885.01.T01 AT1G78750 28.125 160 94 5 52 195 1 155 9.92e-12 67.4
MsG0280009885.01.T01 AT1G78750 28.125 160 94 5 52 195 1 155 9.92e-12 67.4
MsG0280009885.01.T01 AT5G38390 34.211 114 64 2 67 180 2 104 1.07e-11 67.4
MsG0280009885.01.T01 AT3G59230 31.496 127 84 1 57 180 2 128 1.39e-11 67.0
MsG0280009885.01.T01 AT3G59170 23.663 486 253 21 64 476 4 444 1.42e-11 67.0
MsG0280009885.01.T01 AT2G26860 23.202 431 272 17 67 473 2 397 3.29e-11 65.9
MsG0280009885.01.T01 AT2G26860 23.202 431 272 17 67 473 2 397 3.29e-11 65.9
MsG0280009885.01.T01 AT3G44090 30.380 158 91 4 72 221 29 175 4.30e-11 65.5
MsG0280009885.01.T01 AT5G22610 31.933 119 70 2 64 179 15 125 4.64e-11 65.5
MsG0280009885.01.T01 AT3G58930 37.113 97 57 2 67 159 2 98 4.98e-11 65.5
MsG0280009885.01.T01 AT3G58930 37.113 97 57 2 67 159 2 98 4.98e-11 65.5
MsG0280009885.01.T01 AT5G22610 31.933 119 70 2 64 179 15 125 5.41e-11 65.5
MsG0280009885.01.T01 AT3G51530 27.103 214 123 7 52 257 14 202 5.80e-11 65.1
MsG0280009885.01.T01 AT5G56400 23.661 448 246 18 65 473 31 421 6.39e-11 65.1

Find 73 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTGTCGTTGTTCCAAAA+TGG 0.135867 2:+60083133 None:intergenic
CAGAAGCTCTTGGTTGAATT+TGG 0.158282 2:+60079664 None:intergenic
TCCTATTATAGTTGTAATTT+TGG 0.161821 2:-60080768 MsG0280009885.01.T01:CDS
ACAAAGCATTCTTTAATTCT+TGG 0.171448 2:+60079579 None:intergenic
TGGCTCAACATTGCAAATTT+AGG 0.214324 2:+60079863 None:intergenic
TTGGATCTTGGCTATATTAC+TGG 0.221665 2:-60079839 MsG0280009885.01.T01:CDS
CACTGTGATTGAAGAATTAA+AGG 0.234342 2:-60079477 MsG0280009885.01.T01:CDS
GAATTTACTTATTGTGGTTA+TGG 0.252283 2:-60080504 MsG0280009885.01.T01:CDS
CTCTTATAAGTTAGAAGAAT+TGG 0.264590 2:-60080835 MsG0280009885.01.T01:CDS
TGCTGTTGTTCCTGATTGTT+TGG 0.284438 2:-60079636 MsG0280009885.01.T01:CDS
TCCAAAATTACAACTATAAT+AGG 0.289933 2:+60080767 None:intergenic
CGAAACGATGGATAGATTCT+TGG 0.307154 2:-60081142 MsG0280009885.01.T01:CDS
CTTTGTCGTTGTTCCAAAAT+GGG 0.309754 2:+60083134 None:intergenic
AATTTACTTATTGTGGTTAT+GGG 0.320671 2:-60080503 MsG0280009885.01.T01:CDS
ATTTGCAATGTTGAGCCATT+TGG 0.322214 2:-60079858 MsG0280009885.01.T01:CDS
ATTGTTGTCCGGACCCATTT+TGG 0.326094 2:-60083147 MsG0280009885.01.T01:CDS
TTTCCTCCTCTCATCATAAA+AGG 0.326180 2:+60079502 None:intergenic
GCTATATTACTGGTGAAGTT+TGG 0.348724 2:-60079829 MsG0280009885.01.T01:CDS
ATTACTGGTGAAGTTTGGTT+TGG 0.366576 2:-60079824 MsG0280009885.01.T01:CDS
CACACAACTTGATAACATTT+AGG 0.373064 2:+60080742 None:intergenic
ATAATTATCAAGTTCAAGTA+TGG 0.373810 2:+60079418 None:intergenic
AGTCTCCAAGTTGTGAAATT+CGG 0.395869 2:-60079608 MsG0280009885.01.T01:CDS
ATGAAAGAATTTACTTATTG+TGG 0.410573 2:-60080510 MsG0280009885.01.T01:CDS
ATGTGAGTAATAAGTGAATC+AGG 0.428392 2:+60081212 None:intergenic
ATGTTGAGCCATTTGGATCT+TGG 0.434751 2:-60079851 MsG0280009885.01.T01:CDS
AATGTCCTTAGTCGTGCTTC+AGG 0.446109 2:+60083186 None:intergenic
GTGAAGTGTATTGAATTTCG+TGG 0.448439 2:-60080345 MsG0280009885.01.T01:CDS
AAACATAAGAAGAAGAAATC+AGG 0.450964 2:-60081077 MsG0280009885.01.T01:CDS
TCGTTGTTCCAAAATGGGTC+CGG 0.466532 2:+60083139 None:intergenic
AAAACTAGAGTATTGAGAAC+AGG 0.469868 2:+60079785 None:intergenic
TAGGAAAACTGTTATACAAA+TGG 0.484033 2:-60081294 MsG0280009885.01.T01:CDS
GTGTATTGAATTTCGTGGAT+TGG 0.491197 2:-60080340 MsG0280009885.01.T01:CDS
CAGCAAAATTCAGAAGCTCT+TGG 0.496681 2:+60079654 None:intergenic
GAATTTCACAACTTGGAGAC+TGG 0.497489 2:+60079610 None:intergenic
TGGGTCCGGACAACAATCTT+CGG 0.497636 2:+60083153 None:intergenic
ATATATCCCTTCTCAATACA+TGG 0.498536 2:-60080956 MsG0280009885.01.T01:CDS
ATGTTCCGAATTTCACAACT+TGG 0.501322 2:+60079603 None:intergenic
TCGCACCTGAAGCACGACTA+AGG 0.502472 2:-60083191 MsG0280009885.01.T01:CDS
ACAACTATAATAGGAACTGC+AGG 0.514043 2:+60080776 None:intergenic
TTCAACTCATAAGAAGCATA+AGG 0.515133 2:-60081261 MsG0280009885.01.T01:CDS
AGACTGGAAGCCAAACAATC+AGG 0.517701 2:+60079626 None:intergenic
ATGAGATGTATAAGCTGAGA+AGG 0.517821 2:+60080872 None:intergenic
GAAGCACGACTAAGGACATT+GGG 0.518781 2:-60083183 MsG0280009885.01.T01:CDS
TCTTGGTTAAGTACAAATGA+TGG 0.521143 2:-60080645 MsG0280009885.01.T01:CDS
ATTAAAACACTTTCGAGTAG+AGG 0.521784 2:+60080603 None:intergenic
AAAAGAAGACTTTATTATGT+CGG 0.529021 2:-60080580 MsG0280009885.01.T01:CDS
GTTATACAAATGGAGTCTGT+TGG 0.529825 2:-60081284 MsG0280009885.01.T01:CDS
GCAGAGAAATAGTTCTAGCT+AGG 0.531691 2:-60081313 MsG0280009885.01.T01:intron
GAAGCATTACGAGCTGCTGA+TGG 0.543548 2:+60080453 None:intergenic
GACCACCGAAGATTGTTGTC+CGG 0.556072 2:-60083158 MsG0280009885.01.T01:CDS
TAATATAGCCAAGATCCAAA+TGG 0.559967 2:+60079843 None:intergenic
TGAAGCACGACTAAGGACAT+TGG 0.562384 2:-60083184 MsG0280009885.01.T01:CDS
CGATTGTTTCAAGATTCGCT+TGG 0.566502 2:+60083211 None:intergenic
TATTGAATTTCGTGGATTGG+AGG 0.568920 2:-60080337 MsG0280009885.01.T01:intron
GAAGCTGTACTCATTCATGA+AGG 0.569584 2:-60079453 MsG0280009885.01.T01:CDS
TGAGATGTATAAGCTGAGAA+GGG 0.571422 2:+60080873 None:intergenic
TAGAGATCCATGTATTGAGA+AGG 0.578361 2:+60080949 None:intergenic
TTCTTGGACTTTCATCACCA+AGG 0.598868 2:-60081126 MsG0280009885.01.T01:CDS
AGAGATCCATGTATTGAGAA+GGG 0.601322 2:+60080950 None:intergenic
CTTTAATTCTTCAATCACAG+TGG 0.619996 2:+60079478 None:intergenic
TTCACCATCGACGAATCTCT+AGG 0.622362 2:-60080711 MsG0280009885.01.T01:CDS
TATTATGTCGGTAGATCGTG+AGG 0.625710 2:-60080568 MsG0280009885.01.T01:CDS
CTAAATGTTATCAAGTTGTG+TGG 0.635628 2:-60080741 MsG0280009885.01.T01:CDS
AAGCTGTACTCATTCATGAA+GGG 0.641682 2:-60079452 MsG0280009885.01.T01:CDS
ATGATCATCTAAGTTCACCT+TGG 0.643503 2:+60081109 None:intergenic
CAAGTGTGTTATCGAAACGA+TGG 0.662266 2:-60081154 MsG0280009885.01.T01:CDS
CAACTATAATAGGAACTGCA+GGG 0.663473 2:+60080777 None:intergenic
AAAATGGTATGGTGCTTGAG+AGG 0.672776 2:-60079535 MsG0280009885.01.T01:CDS
TTGGAACAACGACAAAGGCG+CGG 0.674245 2:-60083128 MsG0280009885.01.T01:intron
GTCCGGACAACAATCTTCGG+TGG 0.692375 2:+60083156 None:intergenic
TAAGAAGCATAAGGCAAACG+AGG 0.694079 2:-60081252 MsG0280009885.01.T01:CDS
AATACCTAGAGATTCGTCGA+TGG 0.697204 2:+60080707 None:intergenic
CTATAATAGGAACTGCAGGG+AGG 0.768468 2:+60080780 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAAGATATATAATAAAT+AGG + Chr2:60080444-60080463 None:intergenic 10.0%
!! AAATTCTCAATCTTATAATT+AGG + Chr2:60080354-60080373 None:intergenic 15.0%
!! AATTCTCAATCTTATAATTA+GGG + Chr2:60080353-60080372 None:intergenic 15.0%
!! TATGTAAAACTCAAATAAAA+CGG - Chr2:60079963-60079982 MsG0280009885.01.T01:intron 15.0%
!!! AATTTGCTTATATTTTGAAA+CGG - Chr2:60080013-60080032 MsG0280009885.01.T01:intron 15.0%
!!! ATAAGCAAATTTTACTTTTT+AGG + Chr2:60080004-60080023 None:intergenic 15.0%
!!! TGATTTTACTTATTATAGAA+TGG - Chr2:60079683-60079702 MsG0280009885.01.T01:intron 15.0%
!! AAAAGAAGACTTTATTATGT+CGG - Chr2:60082036-60082055 MsG0280009885.01.T01:intron 20.0%
!! AATTTACTTATTGTGGTTAT+GGG - Chr2:60082113-60082132 MsG0280009885.01.T01:intron 20.0%
!! ATAATTATCAAGTTCAAGTA+TGG + Chr2:60083201-60083220 None:intergenic 20.0%
!! ATGAAAGAATTTACTTATTG+TGG - Chr2:60082106-60082125 MsG0280009885.01.T01:intron 20.0%
!! ATTACTTATGCATTAAGAAT+AGG - Chr2:60081231-60081250 MsG0280009885.01.T01:CDS 20.0%
!! CAATAAATAAGATATGTTAG+TGG + Chr2:60079856-60079875 None:intergenic 20.0%
!! GACAGAGAAAATTATAAAAA+GGG + Chr2:60079783-60079802 None:intergenic 20.0%
!! TCCAAAATTACAACTATAAT+AGG + Chr2:60081852-60081871 None:intergenic 20.0%
!! TGACAGAGAAAATTATAAAA+AGG + Chr2:60079784-60079803 None:intergenic 20.0%
!!! AATTTTATCTTTTAAGAGAG+AGG + Chr2:60080508-60080527 None:intergenic 20.0%
!!! ATTAAAGAATGCTTTGTTTT+TGG - Chr2:60083043-60083062 MsG0280009885.01.T01:intron 20.0%
!!! ATTCCCATTATTTTTTCAAA+AGG - Chr2:60080579-60080598 MsG0280009885.01.T01:CDS 20.0%
!!! ATTTTATCTTTTAAGAGAGA+GGG + Chr2:60080507-60080526 None:intergenic 20.0%
!!! GTTTTACATAGTAAGTATTA+AGG + Chr2:60079953-60079972 None:intergenic 20.0%
!!! TCCTATTATAGTTGTAATTT+TGG - Chr2:60081848-60081867 MsG0280009885.01.T01:intron 20.0%
!!! TGATTTTGTTCTAATTGATT+GGG + Chr2:60079546-60079565 None:intergenic 20.0%
!!! TTGATTTTGTTCTAATTGAT+TGG + Chr2:60079547-60079566 None:intergenic 20.0%
! AAAATGTCTATCCGTATTAA+TGG - Chr2:60080185-60080204 MsG0280009885.01.T01:intron 25.0%
! AAACATAAGAAGAAGAAATC+AGG - Chr2:60081539-60081558 MsG0280009885.01.T01:intron 25.0%
! AAGTATATATATTCCATGCT+TGG + Chr2:60082359-60082378 None:intergenic 25.0%
! AGAATGGATATAGTAGTATT+TGG - Chr2:60079699-60079718 MsG0280009885.01.T01:intron 25.0%
! AGATTGCATGTTTAAATTAG+AGG - Chr2:60081079-60081098 MsG0280009885.01.T01:CDS 25.0%
! CAAAAAAATTCTTAAACCTC+TGG + Chr2:60080128-60080147 None:intergenic 25.0%
! CTAAATAAGAGGAGATATAA+AGG + Chr2:60082897-60082916 None:intergenic 25.0%
! CTCTTATAAGTTAGAAGAAT+TGG - Chr2:60081781-60081800 MsG0280009885.01.T01:intron 25.0%
! CTTTAACAGATCCATTAATA+CGG + Chr2:60080199-60080218 None:intergenic 25.0%
! GAATTTACTTATTGTGGTTA+TGG - Chr2:60082112-60082131 MsG0280009885.01.T01:intron 25.0%
! GAATTTATTAAGTACTACCT+CGG + Chr2:60080621-60080640 None:intergenic 25.0%
! GGAGTATATGTGAATAATAT+TGG + Chr2:60082581-60082600 None:intergenic 25.0%
! TAAAACTCAAATAAAACGGA+GGG - Chr2:60079967-60079986 MsG0280009885.01.T01:intron 25.0%
! TAATCTTATACTGAACATGT+TGG - Chr2:60082331-60082350 MsG0280009885.01.T01:intron 25.0%
! TAGGAAAACTGTTATACAAA+TGG - Chr2:60081322-60081341 MsG0280009885.01.T01:intron 25.0%
! TCAAACAAAGTCTAAATAAG+AGG + Chr2:60082908-60082927 None:intergenic 25.0%
! TTGACCATGTAATAAAATTC+AGG + Chr2:60082602-60082621 None:intergenic 25.0%
!! AATGTAGTTTGAAATAGCAA+AGG + Chr2:60080398-60080417 None:intergenic 25.0%
!! ACAAAGCATTCTTTAATTCT+TGG + Chr2:60083040-60083059 None:intergenic 25.0%
!! ATGTAGTTTGAAATAGCAAA+GGG + Chr2:60080397-60080416 None:intergenic 25.0%
!! GAATTTTATTACATGGTCAA+CGG - Chr2:60082602-60082621 MsG0280009885.01.T01:intron 25.0%
!! GATTTTGTTCTAATTGATTG+GGG + Chr2:60079545-60079564 None:intergenic 25.0%
!! TACTCCTGAATTTTATTACA+TGG - Chr2:60082595-60082614 MsG0280009885.01.T01:intron 25.0%
!!! AATCTTTAAAACATTTGTGG+GGG + Chr2:60081064-60081083 None:intergenic 25.0%
!!! ATGTTTAAATTAGAGGCATT+TGG - Chr2:60081086-60081105 MsG0280009885.01.T01:CDS 25.0%
!!! CAATCTTTAAAACATTTGTG+GGG + Chr2:60081065-60081084 None:intergenic 25.0%
!!! GCAATCTTTAAAACATTTGT+GGG + Chr2:60081066-60081085 None:intergenic 25.0%
!!! GGTCCTTTTGAAAAAATAAT+GGG + Chr2:60080585-60080604 None:intergenic 25.0%
!!! GTTCTTTGTTTATGTTTTCT+TGG + Chr2:60079616-60079635 None:intergenic 25.0%
!!! TAGTTTGTTAATAGACCATA+TGG - Chr2:60082662-60082681 MsG0280009885.01.T01:intron 25.0%
!!! TCTCAAACTTTTTCAATGTT+CGG + Chr2:60081940-60081959 None:intergenic 25.0%
!!! TGCAATCTTTAAAACATTTG+TGG + Chr2:60081067-60081086 None:intergenic 25.0%
!!! TGTTTAAATTAGAGGCATTT+GGG - Chr2:60081087-60081106 MsG0280009885.01.T01:CDS 25.0%
!!! TTTTTTTCTGGAAAATGGTA+TGG - Chr2:60083070-60083089 MsG0280009885.01.T01:intron 25.0%
AAAATTCTTAAACCTCTGGT+TGG + Chr2:60080124-60080143 None:intergenic 30.0%
AACCTGAATGACATAGATTA+AGG + Chr2:60082706-60082725 None:intergenic 30.0%
AAGTTGCTTATAAATGTGAC+CGG - Chr2:60080756-60080775 MsG0280009885.01.T01:CDS 30.0%
AATGGATCTGTTAAAGCAAT+TGG - Chr2:60080203-60080222 MsG0280009885.01.T01:intron 30.0%
AGCAAAGGGCTATTATAAAA+AGG + Chr2:60080383-60080402 None:intergenic 30.0%
AGGGTATGATATGAATGTAA+AGG + Chr2:60080099-60080118 None:intergenic 30.0%
ATATATCCCTTCTCAATACA+TGG - Chr2:60081660-60081679 MsG0280009885.01.T01:intron 30.0%
ATCCTTAATCTATGTCATTC+AGG - Chr2:60082701-60082720 MsG0280009885.01.T01:intron 30.0%
ATGTGAGTAATAAGTGAATC+AGG + Chr2:60081407-60081426 None:intergenic 30.0%
CACTGTGATTGAAGAATTAA+AGG - Chr2:60083139-60083158 MsG0280009885.01.T01:CDS 30.0%
CTCAATCTTATAATTAGGGA+CGG + Chr2:60080349-60080368 None:intergenic 30.0%
CTTTAATTCTTCAATCACAG+TGG + Chr2:60083141-60083160 None:intergenic 30.0%
GCAAAGGGCTATTATAAAAA+GGG + Chr2:60080382-60080401 None:intergenic 30.0%
GGGTATGATATGAATGTAAA+GGG + Chr2:60080098-60080117 None:intergenic 30.0%
GTAAAACTCAAATAAAACGG+AGG - Chr2:60079966-60079985 MsG0280009885.01.T01:intron 30.0%
TAAAGCAATTGGAATTTGAG+AGG - Chr2:60080214-60080233 MsG0280009885.01.T01:intron 30.0%
TAATATAGCCAAGATCCAAA+TGG + Chr2:60082776-60082795 None:intergenic 30.0%
TATAGTAGTATTTGGAGAGT+TGG - Chr2:60079707-60079726 MsG0280009885.01.T01:intron 30.0%
TCTTGGTTAAGTACAAATGA+TGG - Chr2:60081971-60081990 MsG0280009885.01.T01:intron 30.0%
TGCTTATAAATGTGACTAGA+GGG + Chr2:60080643-60080662 None:intergenic 30.0%
TTCAAAAGGACCCTATAATT+AGG - Chr2:60080593-60080612 MsG0280009885.01.T01:CDS 30.0%
TTGAGATGAAAAACTGTTCT+TGG - Chr2:60081954-60081973 MsG0280009885.01.T01:intron 30.0%
TTGCTTATAAATGTGACTAG+AGG + Chr2:60080644-60080663 None:intergenic 30.0%
TTTACCTTGTTACTCTTGTT+TGG + Chr2:60080896-60080915 None:intergenic 30.0%
! ATTAAAACACTTTCGAGTAG+AGG + Chr2:60082016-60082035 None:intergenic 30.0%
! CACACAACTTGATAACATTT+AGG + Chr2:60081877-60081896 None:intergenic 30.0%
! CTAAATGTTATCAAGTTGTG+TGG - Chr2:60081875-60081894 MsG0280009885.01.T01:intron 30.0%
! TCTTGTTTGGGTTTATAAAG+AGG + Chr2:60080883-60080902 None:intergenic 30.0%
! TTACCTTGTTACTCTTGTTT+GGG + Chr2:60080895-60080914 None:intergenic 30.0%
! TTCAACTCATAAGAAGCATA+AGG - Chr2:60081355-60081374 MsG0280009885.01.T01:intron 30.0%
!! AAAACTAGAGTATTGAGAAC+AGG + Chr2:60082834-60082853 None:intergenic 30.0%
!! GGGTCCTTTTGAAAAAATAA+TGG + Chr2:60080586-60080605 None:intergenic 30.0%
!! GGTTTTGACAAAACAAAATG+TGG - Chr2:60082722-60082741 MsG0280009885.01.T01:intron 30.0%
!! TTCTTCTTGTTTCTACACAA+AGG - Chr2:60081004-60081023 MsG0280009885.01.T01:CDS 30.0%
!!! GCTAGTTTTTTTCTGGAAAA+TGG - Chr2:60083065-60083084 MsG0280009885.01.T01:intron 30.0%
!!! GTTTTTGGCTAGTTTTTTTC+TGG - Chr2:60083058-60083077 MsG0280009885.01.T01:intron 30.0%
!!! TGCTTATATTTTGAAACGGA+GGG - Chr2:60080017-60080036 MsG0280009885.01.T01:intron 30.0%
!!! TTGCTTATATTTTGAAACGG+AGG - Chr2:60080016-60080035 MsG0280009885.01.T01:intron 30.0%
!!! TTTCTTGGTCTGTTTTGATT+TGG + Chr2:60079601-60079620 None:intergenic 30.0%
AAACCCAAACAAGAGTAACA+AGG - Chr2:60080889-60080908 MsG0280009885.01.T01:CDS 35.0%
AAGCTGTACTCATTCATGAA+GGG - Chr2:60083164-60083183 MsG0280009885.01.T01:CDS 35.0%
AAGTTCTCAATTGATGCACA+CGG + Chr2:60082410-60082429 None:intergenic 35.0%
AATCTTATAATTAGGGACGG+AGG + Chr2:60080346-60080365 None:intergenic 35.0%
ACAACTATAATAGGAACTGC+AGG + Chr2:60081843-60081862 None:intergenic 35.0%
AGAGATCCATGTATTGAGAA+GGG + Chr2:60081669-60081688 None:intergenic 35.0%
AGTAAGAAAGGTTTAGGAGA+GGG - Chr2:60080783-60080802 MsG0280009885.01.T01:CDS 35.0%
AGTCTCCAAGTTGTGAAATT+CGG - Chr2:60083008-60083027 MsG0280009885.01.T01:intron 35.0%
ATGAGATGTATAAGCTGAGA+AGG + Chr2:60081747-60081766 None:intergenic 35.0%
ATGATCATCTAAGTTCACCT+TGG + Chr2:60081510-60081529 None:intergenic 35.0%
ATGTTCCGAATTTCACAACT+TGG + Chr2:60083016-60083035 None:intergenic 35.0%
ATTACTGGTGAAGTTTGGTT+TGG - Chr2:60082792-60082811 MsG0280009885.01.T01:intron 35.0%
ATTTGCAATGTTGAGCCATT+TGG - Chr2:60082758-60082777 MsG0280009885.01.T01:intron 35.0%
CAACTATAATAGGAACTGCA+GGG + Chr2:60081842-60081861 None:intergenic 35.0%
CTTGTTTACACTGAACCATA+TGG + Chr2:60082680-60082699 None:intergenic 35.0%
CTTTGTCGTTGTTCCAAAAT+GGG + Chr2:60079485-60079504 None:intergenic 35.0%
GCTATATTACTGGTGAAGTT+TGG - Chr2:60082787-60082806 MsG0280009885.01.T01:intron 35.0%
GGTAGTAATATTGAGTCCAT+CGG + Chr2:60080319-60080338 None:intergenic 35.0%
GTGAAGTGTATTGAATTTCG+TGG - Chr2:60082271-60082290 MsG0280009885.01.T01:intron 35.0%
GTGTATTGAATTTCGTGGAT+TGG - Chr2:60082276-60082295 MsG0280009885.01.T01:intron 35.0%
GTTATACAAATGGAGTCTGT+TGG - Chr2:60081332-60081351 MsG0280009885.01.T01:intron 35.0%
TAAACCTTTCTTACTCCTTC+CGG + Chr2:60080778-60080797 None:intergenic 35.0%
TACCTCGGTTCCTAATTATA+GGG + Chr2:60080606-60080625 None:intergenic 35.0%
TAGAGATCCATGTATTGAGA+AGG + Chr2:60081670-60081689 None:intergenic 35.0%
TGAGATGTATAAGCTGAGAA+GGG + Chr2:60081746-60081765 None:intergenic 35.0%
TGGCTCAACATTGCAAATTT+AGG + Chr2:60082756-60082775 None:intergenic 35.0%
TTGGATCTTGGCTATATTAC+TGG - Chr2:60082777-60082796 MsG0280009885.01.T01:intron 35.0%
TTTCCTCCTCTCATCATAAA+AGG + Chr2:60083117-60083136 None:intergenic 35.0%
! GTTGTGTCGGAAATTGTTTT+AGG + Chr2:60080272-60080291 None:intergenic 35.0%
! GTTTCTCCTTTTATGATGAG+AGG - Chr2:60083108-60083127 MsG0280009885.01.T01:intron 35.0%
!! ACTTGAGTAACTTGTTGTGT+CGG + Chr2:60080285-60080304 None:intergenic 35.0%
!! TAAATTAGAGGCATTTGGGT+GGG - Chr2:60081091-60081110 MsG0280009885.01.T01:CDS 35.0%
!! TATCTTTTAAGAGAGAGGGT+TGG + Chr2:60080503-60080522 None:intergenic 35.0%
!! TATTGAATTTCGTGGATTGG+AGG - Chr2:60082279-60082298 MsG0280009885.01.T01:intron 35.0%
!! TTAAATTAGAGGCATTTGGG+TGG - Chr2:60081090-60081109 MsG0280009885.01.T01:CDS 35.0%
!!! TCTCAATACTCTAGTTTTCG+AGG - Chr2:60082836-60082855 MsG0280009885.01.T01:intron 35.0%
AAAATGGTATGGTGCTTGAG+AGG - Chr2:60083081-60083100 MsG0280009885.01.T01:intron 40.0%
AAACATTTGTGGGGGATTGT+TGG + Chr2:60081056-60081075 None:intergenic 40.0%
AACGGAGGGAGTAATATGAA+AGG - Chr2:60079981-60080000 MsG0280009885.01.T01:intron 40.0%
AAGGGACACCTAATTTGAGA+CGG + Chr2:60079765-60079784 None:intergenic 40.0%
AATACCTAGAGATTCGTCGA+TGG + Chr2:60081912-60081931 None:intergenic 40.0%
ACGGAGGGAGTAATATGAAA+GGG - Chr2:60080032-60080051 MsG0280009885.01.T01:intron 40.0%
AGGGAGGAAATATTGAGAGT+TGG - Chr2:60080051-60080070 MsG0280009885.01.T01:intron 40.0%
ATGTTGAGCCATTTGGATCT+TGG - Chr2:60082765-60082784 MsG0280009885.01.T01:intron 40.0%
CAAGTGTGTTATCGAAACGA+TGG - Chr2:60081462-60081481 MsG0280009885.01.T01:intron 40.0%
CAGAAGCTCTTGGTTGAATT+TGG + Chr2:60082955-60082974 None:intergenic 40.0%
CAGCAAAATTCAGAAGCTCT+TGG + Chr2:60082965-60082984 None:intergenic 40.0%
CCTTTGTCGTTGTTCCAAAA+TGG + Chr2:60079486-60079505 None:intergenic 40.0%
CGAAACGATGGATAGATTCT+TGG - Chr2:60081474-60081493 MsG0280009885.01.T01:intron 40.0%
CGATTGTTTCAAGATTCGCT+TGG + Chr2:60079408-60079427 None:intergenic 40.0%
CTACCTCGGTTCCTAATTAT+AGG + Chr2:60080607-60080626 None:intergenic 40.0%
GAAGCTGTACTCATTCATGA+AGG - Chr2:60083163-60083182 MsG0280009885.01.T01:CDS 40.0%
GAATTTCACAACTTGGAGAC+TGG + Chr2:60083009-60083028 None:intergenic 40.0%
GAGTAAGAAAGGTTTAGGAG+AGG - Chr2:60080782-60080801 MsG0280009885.01.T01:CDS 40.0%
GGAAGGAGTAAGAAAGGTTT+AGG - Chr2:60080777-60080796 MsG0280009885.01.T01:CDS 40.0%
TAATATTGGCACTCCGCATA+CGG + Chr2:60082567-60082586 None:intergenic 40.0%
TACCTAGTAGTACTAGACTC+AGG - Chr2:60080831-60080850 MsG0280009885.01.T01:CDS 40.0%
TATTATGTCGGTAGATCGTG+AGG - Chr2:60082048-60082067 MsG0280009885.01.T01:intron 40.0%
TCTAATTGATTGGGGTTCGT+TGG + Chr2:60079537-60079556 None:intergenic 40.0%
TGCTGTTGTTCCTGATTGTT+TGG - Chr2:60082980-60082999 MsG0280009885.01.T01:intron 40.0%
TGCTTATAAATGTGACCGGA+AGG - Chr2:60080760-60080779 MsG0280009885.01.T01:CDS 40.0%
TTATGTACTGTCACCGTATG+CGG - Chr2:60082551-60082570 MsG0280009885.01.T01:intron 40.0%
TTCTTGGACTTTCATCACCA+AGG - Chr2:60081490-60081509 MsG0280009885.01.T01:intron 40.0%
! AACGAGCAGCATCTTTTGTT+GGG + Chr2:60081442-60081461 None:intergenic 40.0%
! CATTTTGAGCTTGCGTTGTT+GGG + Chr2:60079665-60079684 None:intergenic 40.0%
! CTTAAACCTCTGGTTGGTTA+GGG + Chr2:60080118-60080137 None:intergenic 40.0%
! TAAGAAGCATAAGGCAAACG+AGG - Chr2:60081364-60081383 MsG0280009885.01.T01:intron 40.0%
! TCATTTTGAGCTTGCGTTGT+TGG + Chr2:60079666-60079685 None:intergenic 40.0%
! TCTCCTTTTATGATGAGAGG+AGG - Chr2:60083111-60083130 MsG0280009885.01.T01:intron 40.0%
! TCTTAAACCTCTGGTTGGTT+AGG + Chr2:60080119-60080138 None:intergenic 40.0%
!! GCAGAGAAATAGTTCTAGCT+AGG - Chr2:60081303-60081322 MsG0280009885.01.T01:CDS 40.0%
!!! CCATTTTGGAACAACGACAA+AGG - Chr2:60079483-60079502 MsG0280009885.01.T01:CDS 40.0%
AATGTCCTTAGTCGTGCTTC+AGG + Chr2:60079433-60079452 None:intergenic 45.0%
AGACTGGAAGCCAAACAATC+AGG + Chr2:60082993-60083012 None:intergenic 45.0%
AGTAAGATAGCGTGGGAGAT+TGG + Chr2:60080857-60080876 None:intergenic 45.0%
ATACCCCACCGTCTCAAATT+AGG - Chr2:60079754-60079773 MsG0280009885.01.T01:intron 45.0%
ATCATACCCTAACCAACCAG+AGG - Chr2:60080109-60080128 MsG0280009885.01.T01:intron 45.0%
CTATAATAGGAACTGCAGGG+AGG + Chr2:60081839-60081858 None:intergenic 45.0%
CTTATAATTAGGGACGGAGG+TGG + Chr2:60080343-60080362 None:intergenic 45.0%
GAAGCACGACTAAGGACATT+GGG - Chr2:60079433-60079452 MsG0280009885.01.T01:CDS 45.0%
GACCCTATAATTAGGAACCG+AGG - Chr2:60080601-60080620 MsG0280009885.01.T01:CDS 45.0%
GAGGGAGTAATATGAAAGGG+AGG - Chr2:60080035-60080054 MsG0280009885.01.T01:intron 45.0%
TCGTTGTTCCAAAATGGGTC+CGG + Chr2:60079480-60079499 None:intergenic 45.0%
TGAAGCACGACTAAGGACAT+TGG - Chr2:60079432-60079451 MsG0280009885.01.T01:CDS 45.0%
TTCACCATCGACGAATCTCT+AGG - Chr2:60081905-60081924 MsG0280009885.01.T01:intron 45.0%
! ACACCTAATTTGAGACGGTG+GGG + Chr2:60079760-60079779 None:intergenic 45.0%
! ATTGTTGTCCGGACCCATTT+TGG - Chr2:60079469-60079488 MsG0280009885.01.T01:CDS 45.0%
! GAACGAGCAGCATCTTTTGT+TGG + Chr2:60081443-60081462 None:intergenic 45.0%
! GACACCTAATTTGAGACGGT+GGG + Chr2:60079761-60079780 None:intergenic 45.0%
!! TGGGGGATTGTTGGTTTCAT+TGG + Chr2:60081047-60081066 None:intergenic 45.0%
!! TTTAGGAGAGGGCATCTAGT+AGG - Chr2:60080794-60080813 MsG0280009885.01.T01:CDS 45.0%
!! AAAAAGATATATAATAAATA+GGG + Chr2:60080443-60080462 None:intergenic 5.0%
AGAGGCAGAGTAAGATAGCG+TGG + Chr2:60080865-60080884 None:intergenic 50.0%
ATAATTAGGGACGGAGGTGG+AGG + Chr2:60080340-60080359 None:intergenic 50.0%
CAAGTGAACTCAACAGCCGA+TGG - Chr2:60080300-60080319 MsG0280009885.01.T01:intron 50.0%
GACCACCGAAGATTGTTGTC+CGG - Chr2:60079458-60079477 MsG0280009885.01.T01:CDS 50.0%
GAGGCAGAGTAAGATAGCGT+GGG + Chr2:60080864-60080883 None:intergenic 50.0%
GGCCTGAGTCTAGTACTACT+AGG + Chr2:60080836-60080855 None:intergenic 50.0%
GTGACCGGAAGGAGTAAGAA+AGG - Chr2:60080771-60080790 MsG0280009885.01.T01:CDS 50.0%
TGGGTCCGGACAACAATCTT+CGG + Chr2:60079466-60079485 None:intergenic 50.0%
TTGGAACAACGACAAAGGCG+CGG - Chr2:60079488-60079507 MsG0280009885.01.T01:CDS 50.0%
! GAAGCATTACGAGCTGCTGA+TGG + Chr2:60082166-60082185 None:intergenic 50.0%
! GGACACCTAATTTGAGACGG+TGG + Chr2:60079762-60079781 None:intergenic 50.0%
! TGATTGGGGTTCGTTGGTTG+CGG + Chr2:60079531-60079550 None:intergenic 50.0%
!! GAACATGTTGGTGCCAAGCA+TGG - Chr2:60082343-60082362 MsG0280009885.01.T01:intron 50.0%
GTCCGGACAACAATCTTCGG+TGG + Chr2:60079463-60079482 None:intergenic 55.0%
TCGCACCTGAAGCACGACTA+AGG - Chr2:60079425-60079444 MsG0280009885.01.T01:CDS 55.0%
! GTTCGTTGGTTGCGGTTGTC+CGG + Chr2:60079523-60079542 None:intergenic 55.0%
!! GAGGGCATCTAGTAGGCACT+AGG - Chr2:60080801-60080820 MsG0280009885.01.T01:CDS 55.0%
! AAAGGCGCGGTGAAGTCCAC+CGG - Chr2:60079501-60079520 MsG0280009885.01.T01:CDS 60.0%
! CGTTGGTTGCGGTTGTCCGG+TGG + Chr2:60079520-60079539 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 60079391 60083247 60079391 ID=MsG0280009885.01;Name=MsG0280009885.01
Chr2 mRNA 60079391 60083247 60079391 ID=MsG0280009885.01.T01;Parent=MsG0280009885.01;Name=MsG0280009885.01.T01;_AED=0.49;_eAED=0.53;_QI=0|0|0|1|1|1|4|0|516
Chr2 exon 60083129 60083247 60083129 ID=MsG0280009885.01.T01:exon:45500;Parent=MsG0280009885.01.T01
Chr2 exon 60080338 60081331 60080338 ID=MsG0280009885.01.T01:exon:45499;Parent=MsG0280009885.01.T01
Chr2 exon 60079781 60079915 60079781 ID=MsG0280009885.01.T01:exon:45498;Parent=MsG0280009885.01.T01
Chr2 exon 60079391 60079693 60079391 ID=MsG0280009885.01.T01:exon:45497;Parent=MsG0280009885.01.T01
Chr2 CDS 60083129 60083247 60083129 ID=MsG0280009885.01.T01:cds;Parent=MsG0280009885.01.T01
Chr2 CDS 60080338 60081331 60080338 ID=MsG0280009885.01.T01:cds;Parent=MsG0280009885.01.T01
Chr2 CDS 60079781 60079915 60079781 ID=MsG0280009885.01.T01:cds;Parent=MsG0280009885.01.T01
Chr2 CDS 60079391 60079693 60079391 ID=MsG0280009885.01.T01:cds;Parent=MsG0280009885.01.T01
Gene Sequence

>MsG0280009885.01.T01

ATGATCTTTCTTAACCAAGCGAATCTTGAAACAATCGCACCTGAAGCACGACTAAGGACATTGGGACGACCACCGAAGATTGTTGTCCGGACCCATTTTGGAACAACGACAAAGGCGCGAGAAATAGTTCTAGCTAGGAAAACTGTTATACAAATGGAGTCTGTTGGTTCAACTCATAAGAAGCATAAGGCAAACGAGGATATAATCAGCAAACTGCCTGATTCACTTATTACTCACATTCTGTCTTGTGTCCCAACAAAAGATGCTGCTCGTTCAAGTGTGTTATCGAAACGATGGATAGATTCTTGGACTTTCATCACCAAGGTGAACTTAGATGATCATGTGTTCTTTAAACATAAGAAGAAGAAATCAGGTGCAAAAAAGTACTTTATAAACTTTGTCAATAGAGCACTTCTTCTTACTAAAAGTAACACTGCTGAAAGTTTTTCTCTAGTTATCACTAACAAGTATGATATATCCCTTCTCAATACATGGATCTCTAGCATCTTGAAACGAAATGTAAAAAAGATTTCTATCTCTACAAAATTAGAACTACCCTTCTCAGCTTATACATCTCATATTCTTTTTAATTGCTCTTATAAGTTAGAAGAATTGGTGCTTGAGATGCGTCGTTGTTCTATCAAAGTTCCTCCCTGCAGTTCCTATTATAGTTGTAATTTTGGAAGCCTAAATGTTATCAAGTTGTGTGGAATCATATTCACCATCGACGAATCTCTAGGTATTCTTTTCCGAACATTGAAAAAGTTTGAGATGAAAAACTGTTCTTGGTTAAGTACAAATGATGGCACTTTAGAACTAAATGCTCCTCTACTCGAAAGTGTTTTAATAAAAGAAGACTTTATTATGTCGGTAGATCGTGAGGCACGCAGCTGCAAAATCAAGTTTTCTGCTTCGTGTATGAAAGAATTTACTTATTGTGGTTATGGGATGTCACAAGCTATTATTCTGTCAGATCCATCAGCAGCTCGTAATGCTTCTGCTAAAATCATTTTGCATAATAGTTCGAATAGTGTTCAAGAAACTCAAACTTGTACTTCTCTACTTCTCAAACAATTCAGTCAAGTGAAGTGTATTGAATTTCGTGGATTGGAGGTTTTGACAAAACAAAATGTGGCTGTTCTACCTAAATTTGCAATGTTGAGCCATTTGGATCTTGGCTATATTACTGGTGAAGTTTGGTTTGGCTTACTTCACAAGACTCCTGTTCTCAATACTCTAGTTTTCGAGAGAATATCCAAATTCAACCAAGAGCTTCTGAATTTTGCTGTTGTTCCTGATTGTTTGGCTTCCAGTCTCCAAGTTGTGAAATTCGGAACATTCCAAGAATTAAAGAATGCTTTGTTTTTGGCTAGTTTTTTTCTGGAAAATGGTATGGTGCTTGAGAGGATGAGTTTCTCCTTTTATGATGAGAGGAGGAAATCCACTGTGATTGAAGAATTAAAGGAGAAGCTGTACTCATTCATGAAGGGAGACTCTTTTGCCATACTTGAACTTGATAATTATTTGTACTCATATGATTATTATCGTTAG
Protein sequence

>MsG0280009885.01.T01

MIFLNQANLETIAPEARLRTLGRPPKIVVRTHFGTTTKAREIVLARKTVIQMESVGSTHKKHKANEDIISKLPDSLITHILSCVPTKDAARSSVLSKRWIDSWTFITKVNLDDHVFFKHKKKKSGAKKYFINFVNRALLLTKSNTAESFSLVITNKYDISLLNTWISSILKRNVKKISISTKLELPFSAYTSHILFNCSYKLEELVLEMRRCSIKVPPCSSYYSCNFGSLNVIKLCGIIFTIDESLGILFRTLKKFEMKNCSWLSTNDGTLELNAPLLESVLIKEDFIMSVDREARSCKIKFSASCMKEFTYCGYGMSQAIILSDPSAARNASAKIILHNSSNSVQETQTCTSLLLKQFSQVKCIEFRGLEVLTKQNVAVLPKFAMLSHLDLGYITGEVWFGLLHKTPVLNTLVFERISKFNQELLNFAVVPDCLASSLQVVKFGTFQELKNALFLASFFLENGMVLERMSFSFYDERRKSTVIEELKEKLYSFMKGDSFAILELDNYLYSYDYYR*