Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021507.01.T01 | XP_013456713.1 | 67.454 | 381 | 120 | 2 | 44 | 422 | 113 | 491 | 2.07E-173 | 504 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021507.01.T01 | Q9ZV93 | 26.95 | 423 | 219 | 14 | 18 | 364 | 18 | 426 | 3.60E-15 | 80.9 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021507.01.T01 | A0A072ULT5 | 67.454 | 381 | 120 | 2 | 44 | 422 | 113 | 491 | 9.87e-174 | 504 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021507.01.T01 | MTR_4g080787 | 67.454 | 381 | 120 | 2 | 44 | 422 | 113 | 491 | 2.50e-177 | 504 |
MsG0480021507.01.T01 | MTR_4g080773 | 63.402 | 388 | 139 | 2 | 44 | 428 | 113 | 500 | 3.77e-153 | 443 |
MsG0480021507.01.T01 | MTR_3g048290 | 62.016 | 387 | 138 | 3 | 37 | 418 | 100 | 482 | 4.11e-153 | 442 |
MsG0480021507.01.T01 | MTR_4g080773 | 64.136 | 382 | 134 | 2 | 44 | 422 | 113 | 494 | 9.03e-152 | 440 |
MsG0480021507.01.T01 | MTR_4g080807 | 58.166 | 349 | 111 | 2 | 43 | 390 | 11 | 325 | 6.84e-136 | 396 |
MsG0480021507.01.T01 | MTR_4g080590 | 40.351 | 456 | 212 | 7 | 2 | 401 | 5 | 456 | 1.84e-89 | 279 |
MsG0480021507.01.T01 | MTR_4g130200 | 40.284 | 422 | 195 | 5 | 1 | 396 | 1 | 391 | 2.47e-86 | 269 |
MsG0480021507.01.T01 | MTR_5g039950 | 40.278 | 432 | 186 | 8 | 2 | 387 | 5 | 410 | 2.06e-84 | 265 |
MsG0480021507.01.T01 | MTR_7g039630 | 43.363 | 339 | 162 | 6 | 2 | 310 | 5 | 343 | 2.95e-76 | 241 |
MsG0480021507.01.T01 | MTR_7g023310 | 39.024 | 451 | 209 | 8 | 7 | 396 | 11 | 456 | 4.72e-74 | 239 |
MsG0480021507.01.T01 | MTR_4g080590 | 40.548 | 365 | 157 | 7 | 2 | 310 | 5 | 365 | 2.42e-63 | 209 |
MsG0480021507.01.T01 | MTR_7g023330 | 38.889 | 414 | 216 | 16 | 1 | 396 | 1 | 395 | 1.16e-61 | 205 |
MsG0480021507.01.T01 | MTR_4g081030 | 34.685 | 444 | 185 | 8 | 1 | 396 | 1 | 387 | 3.05e-57 | 193 |
MsG0480021507.01.T01 | MTR_5g039970 | 40.062 | 322 | 131 | 6 | 2 | 261 | 1 | 322 | 3.49e-52 | 178 |
MsG0480021507.01.T01 | MTR_2g094750 | 45.070 | 284 | 135 | 9 | 39 | 306 | 182 | 460 | 1.54e-49 | 175 |
MsG0480021507.01.T01 | MTR_2g094450 | 38.587 | 184 | 94 | 6 | 138 | 317 | 31 | 199 | 3.95e-21 | 91.3 |
MsG0480021507.01.T01 | MTR_1g082260 | 38.889 | 126 | 71 | 2 | 55 | 177 | 62 | 184 | 5.53e-17 | 79.0 |
MsG0480021507.01.T01 | MTR_5g084070 | 27.000 | 400 | 223 | 11 | 18 | 365 | 13 | 395 | 1.34e-16 | 82.0 |
MsG0480021507.01.T01 | MTR_8g467800 | 27.671 | 365 | 218 | 13 | 56 | 398 | 114 | 454 | 2.95e-14 | 74.7 |
MsG0480021507.01.T01 | MTR_5g080710 | 25.891 | 421 | 227 | 15 | 8 | 365 | 23 | 421 | 7.27e-14 | 73.6 |
MsG0480021507.01.T01 | MTR_2g072530 | 23.218 | 435 | 257 | 11 | 12 | 379 | 5 | 429 | 1.39e-13 | 72.8 |
MsG0480021507.01.T01 | MTR_2g102420 | 44.944 | 89 | 43 | 2 | 218 | 306 | 5 | 87 | 8.43e-13 | 64.3 |
MsG0480021507.01.T01 | MTR_5g005690 | 22.715 | 361 | 242 | 6 | 47 | 372 | 102 | 460 | 1.15e-12 | 70.1 |
MsG0480021507.01.T01 | MTR_1g115250 | 25.056 | 443 | 246 | 19 | 8 | 387 | 20 | 439 | 2.78e-12 | 68.6 |
MsG0480021507.01.T01 | MTR_4g032730 | 26.016 | 369 | 226 | 11 | 56 | 396 | 117 | 466 | 8.64e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021507.01.T01 | AT3G60040 | 29.592 | 294 | 187 | 10 | 56 | 347 | 121 | 396 | 7.71e-18 | 86.3 |
MsG0480021507.01.T01 | AT3G60040 | 29.592 | 294 | 187 | 10 | 56 | 347 | 338 | 613 | 1.15e-17 | 85.9 |
MsG0480021507.01.T01 | AT3G60040 | 29.592 | 294 | 187 | 10 | 56 | 347 | 340 | 615 | 1.26e-17 | 85.9 |
MsG0480021507.01.T01 | AT3G60040 | 29.592 | 294 | 187 | 10 | 56 | 347 | 340 | 615 | 1.38e-17 | 85.9 |
MsG0480021507.01.T01 | AT3G60040 | 29.592 | 294 | 187 | 10 | 56 | 347 | 341 | 616 | 1.49e-17 | 85.9 |
MsG0480021507.01.T01 | AT1G78750 | 26.950 | 423 | 219 | 14 | 18 | 364 | 18 | 426 | 3.67e-16 | 80.9 |
MsG0480021507.01.T01 | AT1G78750 | 26.950 | 423 | 219 | 14 | 18 | 364 | 18 | 426 | 3.67e-16 | 80.9 |
MsG0480021507.01.T01 | AT5G38590 | 27.246 | 334 | 194 | 11 | 51 | 368 | 87 | 387 | 2.65e-15 | 77.8 |
MsG0480021507.01.T01 | AT4G22280 | 28.483 | 323 | 204 | 9 | 51 | 367 | 84 | 385 | 4.20e-15 | 77.4 |
MsG0480021507.01.T01 | AT5G44970 | 28.150 | 373 | 222 | 17 | 15 | 363 | 1 | 351 | 4.47e-15 | 77.0 |
MsG0480021507.01.T01 | AT5G15620 | 27.920 | 351 | 183 | 15 | 18 | 307 | 2 | 343 | 7.82e-15 | 76.6 |
MsG0480021507.01.T01 | AT3G62440 | 28.832 | 274 | 159 | 10 | 54 | 307 | 105 | 362 | 1.20e-14 | 75.9 |
MsG0480021507.01.T01 | AT5G22660 | 26.087 | 414 | 227 | 16 | 18 | 364 | 13 | 414 | 2.57e-14 | 75.1 |
MsG0480021507.01.T01 | AT1G32375 | 26.415 | 318 | 195 | 12 | 79 | 384 | 117 | 407 | 4.93e-14 | 73.9 |
MsG0480021507.01.T01 | AT1G32375 | 26.415 | 318 | 195 | 12 | 79 | 384 | 117 | 407 | 4.93e-14 | 73.9 |
MsG0480021507.01.T01 | AT4G14096 | 24.932 | 365 | 243 | 12 | 51 | 396 | 97 | 449 | 8.62e-14 | 73.6 |
MsG0480021507.01.T01 | AT4G14096 | 24.932 | 365 | 243 | 12 | 51 | 396 | 97 | 449 | 8.62e-14 | 73.6 |
MsG0480021507.01.T01 | AT3G49030 | 26.304 | 441 | 236 | 17 | 12 | 388 | 15 | 430 | 8.74e-14 | 73.2 |
MsG0480021507.01.T01 | AT5G44950 | 27.964 | 329 | 205 | 14 | 54 | 364 | 91 | 405 | 9.48e-14 | 73.2 |
MsG0480021507.01.T01 | AT3G52680 | 24.765 | 319 | 195 | 9 | 82 | 384 | 138 | 427 | 9.87e-14 | 73.2 |
MsG0480021507.01.T01 | AT4G22280 | 29.615 | 260 | 165 | 7 | 51 | 305 | 84 | 330 | 9.88e-14 | 72.4 |
MsG0480021507.01.T01 | AT3G59250 | 27.512 | 418 | 250 | 17 | 18 | 391 | 7 | 415 | 1.07e-13 | 72.8 |
MsG0480021507.01.T01 | AT3G58980 | 24.601 | 439 | 239 | 17 | 18 | 377 | 2 | 427 | 1.24e-13 | 73.2 |
MsG0480021507.01.T01 | AT1G66290 | 25.366 | 410 | 226 | 15 | 18 | 364 | 29 | 421 | 2.06e-13 | 72.4 |
MsG0480021507.01.T01 | AT4G00315 | 24.945 | 453 | 252 | 17 | 18 | 396 | 2 | 440 | 3.46e-13 | 71.6 |
MsG0480021507.01.T01 | AT3G58900 | 28.652 | 356 | 205 | 13 | 44 | 365 | 84 | 424 | 3.71e-13 | 71.6 |
MsG0480021507.01.T01 | AT5G56700 | 25.688 | 327 | 181 | 12 | 56 | 356 | 52 | 342 | 4.10e-13 | 70.9 |
MsG0480021507.01.T01 | AT4G14103 | 24.295 | 461 | 233 | 19 | 14 | 396 | 2 | 424 | 4.80e-13 | 70.9 |
MsG0480021507.01.T01 | AT1G56610 | 27.698 | 278 | 183 | 7 | 46 | 308 | 50 | 324 | 6.60e-13 | 70.5 |
MsG0480021507.01.T01 | AT3G59210 | 24.603 | 378 | 244 | 12 | 40 | 387 | 83 | 449 | 8.59e-13 | 70.5 |
MsG0480021507.01.T01 | AT3G59210 | 24.603 | 378 | 244 | 12 | 40 | 387 | 83 | 449 | 8.59e-13 | 70.5 |
MsG0480021507.01.T01 | AT3G59210 | 24.603 | 378 | 244 | 12 | 40 | 387 | 83 | 449 | 8.59e-13 | 70.5 |
MsG0480021507.01.T01 | AT3G59210 | 24.603 | 378 | 244 | 12 | 40 | 387 | 83 | 449 | 8.59e-13 | 70.5 |
MsG0480021507.01.T01 | AT3G59210 | 24.603 | 378 | 244 | 12 | 40 | 387 | 83 | 449 | 8.59e-13 | 70.5 |
MsG0480021507.01.T01 | AT1G56610 | 27.698 | 278 | 183 | 7 | 46 | 308 | 89 | 363 | 8.89e-13 | 70.5 |
MsG0480021507.01.T01 | AT4G14103 | 26.503 | 366 | 190 | 15 | 14 | 309 | 2 | 358 | 1.25e-12 | 69.3 |
MsG0480021507.01.T01 | AT4G14103 | 26.503 | 366 | 190 | 15 | 14 | 309 | 2 | 358 | 1.25e-12 | 69.3 |
MsG0480021507.01.T01 | AT1G16930 | 25.641 | 390 | 219 | 12 | 1 | 331 | 1 | 378 | 1.34e-12 | 69.7 |
MsG0480021507.01.T01 | AT1G16930 | 25.641 | 390 | 219 | 12 | 1 | 331 | 1 | 378 | 1.34e-12 | 69.7 |
MsG0480021507.01.T01 | AT1G16930 | 25.641 | 390 | 219 | 12 | 1 | 331 | 1 | 378 | 1.34e-12 | 69.7 |
MsG0480021507.01.T01 | AT1G56610 | 27.698 | 278 | 183 | 7 | 46 | 308 | 152 | 426 | 1.43e-12 | 69.7 |
MsG0480021507.01.T01 | AT3G44810 | 29.304 | 273 | 174 | 10 | 49 | 310 | 93 | 357 | 1.59e-12 | 69.3 |
MsG0480021507.01.T01 | AT1G55660 | 24.891 | 458 | 246 | 17 | 18 | 396 | 53 | 491 | 3.29e-12 | 68.6 |
MsG0480021507.01.T01 | AT4G00160 | 23.593 | 462 | 252 | 17 | 15 | 401 | 13 | 448 | 3.89e-12 | 68.2 |
MsG0480021507.01.T01 | AT5G22670 | 25.602 | 332 | 222 | 13 | 52 | 368 | 95 | 416 | 4.11e-12 | 68.2 |
MsG0480021507.01.T01 | AT5G22730 | 26.879 | 346 | 229 | 12 | 41 | 369 | 103 | 441 | 4.21e-12 | 68.2 |
MsG0480021507.01.T01 | AT5G22730 | 26.879 | 346 | 229 | 12 | 41 | 369 | 103 | 441 | 4.21e-12 | 68.2 |
MsG0480021507.01.T01 | AT3G58860 | 25.146 | 342 | 237 | 8 | 30 | 364 | 79 | 408 | 4.83e-12 | 68.2 |
MsG0480021507.01.T01 | AT1G55030 | 23.821 | 424 | 244 | 12 | 6 | 373 | 7 | 407 | 8.19e-12 | 67.0 |
MsG0480021507.01.T01 | AT5G56390 | 24.551 | 334 | 211 | 11 | 58 | 373 | 91 | 401 | 1.22e-11 | 66.6 |
MsG0480021507.01.T01 | AT2G04230 | 24.728 | 368 | 252 | 10 | 46 | 404 | 97 | 448 | 1.50e-11 | 66.2 |
MsG0480021507.01.T01 | AT1G55030 | 24.272 | 412 | 233 | 12 | 18 | 373 | 9 | 397 | 1.67e-11 | 66.2 |
MsG0480021507.01.T01 | AT4G13985 | 26.409 | 337 | 206 | 14 | 62 | 377 | 124 | 439 | 2.59e-11 | 65.9 |
MsG0480021507.01.T01 | AT1G69630 | 27.692 | 325 | 205 | 14 | 56 | 364 | 109 | 419 | 2.61e-11 | 65.9 |
MsG0480021507.01.T01 | AT5G22700 | 26.478 | 423 | 222 | 17 | 17 | 364 | 5 | 413 | 3.00e-11 | 65.5 |
MsG0480021507.01.T01 | AT5G22700 | 26.478 | 423 | 222 | 17 | 17 | 364 | 5 | 413 | 3.00e-11 | 65.5 |
MsG0480021507.01.T01 | AT5G22700 | 26.478 | 423 | 222 | 17 | 17 | 364 | 5 | 413 | 3.00e-11 | 65.5 |
MsG0480021507.01.T01 | AT5G22700 | 26.478 | 423 | 222 | 17 | 17 | 364 | 5 | 413 | 3.00e-11 | 65.5 |
MsG0480021507.01.T01 | AT3G58920 | 27.852 | 298 | 169 | 15 | 50 | 315 | 92 | 375 | 3.99e-11 | 65.1 |
MsG0480021507.01.T01 | AT2G26860 | 23.798 | 416 | 227 | 13 | 18 | 364 | 2 | 396 | 4.00e-11 | 65.1 |
MsG0480021507.01.T01 | AT2G26860 | 23.798 | 416 | 227 | 13 | 18 | 364 | 2 | 396 | 4.00e-11 | 65.1 |
MsG0480021507.01.T01 | AT5G22700 | 26.478 | 423 | 222 | 17 | 17 | 364 | 42 | 450 | 4.48e-11 | 65.1 |
MsG0480021507.01.T01 | AT5G56700 | 31.496 | 127 | 86 | 1 | 46 | 171 | 42 | 168 | 4.57e-11 | 63.9 |
MsG0480021507.01.T01 | AT4G10400 | 22.069 | 435 | 255 | 10 | 18 | 396 | 2 | 408 | 6.99e-11 | 64.3 |
MsG0480021507.01.T01 | AT4G10400 | 22.069 | 435 | 255 | 10 | 18 | 396 | 2 | 408 | 6.99e-11 | 64.3 |
MsG0480021507.01.T01 | AT4G10400 | 22.069 | 435 | 255 | 10 | 18 | 396 | 2 | 408 | 6.99e-11 | 64.3 |
MsG0480021507.01.T01 | AT5G35995 | 27.966 | 354 | 185 | 13 | 16 | 309 | 3 | 346 | 8.89e-11 | 63.9 |
MsG0480021507.01.T01 | AT5G35995 | 27.966 | 354 | 185 | 13 | 16 | 309 | 3 | 346 | 8.89e-11 | 63.9 |
Find 80 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTTCAATTTCCACATTAA+AGG | 0.206236 | 4:+58776345 | MsG0480021507.01.T01:CDS |
GCAGCATATGGTTCACAAAT+AGG | 0.254992 | 4:-58776538 | None:intergenic |
CTTCACAACAGAAGCTATTA+AGG | 0.265510 | 4:-58776041 | None:intergenic |
CGCCCGCCACATCATGTCTT+TGG | 0.276854 | 4:-58775732 | None:intergenic |
TTTCCAGTTTAGGAGTCTTT+AGG | 0.280997 | 4:-58776915 | None:intergenic |
ACTACAGAGGTCAGGTTAAC+AGG | 0.305488 | 4:-58776487 | None:intergenic |
TGATTAGGTGCTTGACTACT+TGG | 0.332984 | 4:+58777055 | MsG0480021507.01.T01:intron |
CTCCCAATCACAATCGTAAA+TGG | 0.338696 | 4:-58776305 | None:intergenic |
CAGAAACCACTAATTTCTTC+AGG | 0.343491 | 4:-58776213 | None:intergenic |
CGACCATTTACGATTGTGAT+TGG | 0.347130 | 4:+58776302 | MsG0480021507.01.T01:CDS |
GGAAGTTCTTACAGCATCTT+TGG | 0.352433 | 4:-58775812 | None:intergenic |
TCTCCTAAAGACTCCTAAAC+TGG | 0.365256 | 4:+58776912 | MsG0480021507.01.T01:CDS |
ATCTGAAGAATTTCCAGTTT+AGG | 0.372247 | 4:-58776925 | None:intergenic |
ATGGTCGACTCTTGTAAAAC+AGG | 0.373945 | 4:-58776286 | None:intergenic |
GGTAACACAAACTTATCATT+TGG | 0.380812 | 4:-58776100 | None:intergenic |
AGCATCTTTGGTAGGGAGTA+AGG | 0.386627 | 4:-58775800 | None:intergenic |
TCATTGACCAAACTGTGTTT+AGG | 0.394125 | 4:+58776145 | MsG0480021507.01.T01:CDS |
TTTCACTGATGAAGTACTAA+TGG | 0.403344 | 4:+58776885 | MsG0480021507.01.T01:CDS |
TCCTAGCCTGAAGAAATTAG+TGG | 0.409219 | 4:+58776207 | MsG0480021507.01.T01:CDS |
ACATTTAAAAGTGTTGTTGA+TGG | 0.411742 | 4:+58776004 | MsG0480021507.01.T01:CDS |
AGTGTTGTGTCGTCAAGTTT+TGG | 0.414078 | 4:+58777306 | MsG0480021507.01.T01:CDS |
CTTGAGTCCTAAACACAGTT+TGG | 0.414655 | 4:-58776152 | None:intergenic |
CTGGAAATTCTTCAGATACC+TGG | 0.417410 | 4:+58776931 | MsG0480021507.01.T01:CDS |
CAGCATATGGTTCACAAATA+GGG | 0.421631 | 4:-58776537 | None:intergenic |
TAGAGAAGGTGGATGATATT+CGG | 0.422406 | 4:+58777258 | MsG0480021507.01.T01:CDS |
GATTTGAAACAGCAAGGCAC+TGG | 0.429593 | 4:-58777101 | None:intergenic |
CTGGGCCTACATCTTCCAAT+TGG | 0.441451 | 4:-58777283 | None:intergenic |
TTAACAGGGATAATATCTAT+TGG | 0.443705 | 4:-58776472 | None:intergenic |
GACCATTTACGATTGTGATT+GGG | 0.457085 | 4:+58776303 | MsG0480021507.01.T01:CDS |
GGATGATATTCGGAACCAAT+TGG | 0.471299 | 4:+58777268 | MsG0480021507.01.T01:CDS |
ATTCCTGCTGCAGGTAAGAA+TGG | 0.473293 | 4:+58778815 | MsG0480021507.01.T01:CDS |
GTTCTTACAGCATCTTTGGT+AGG | 0.480673 | 4:-58775808 | None:intergenic |
ACACATCTTTATGTGTTTCG+TGG | 0.483419 | 4:+58776853 | MsG0480021507.01.T01:CDS |
AACTTGACGACACAACACTC+TGG | 0.485794 | 4:-58777302 | None:intergenic |
ATCTGAAGAAGAACTTCCTC+AGG | 0.490266 | 4:-58775772 | None:intergenic |
CACATCTTTATGTGTTTCGT+GGG | 0.490448 | 4:+58776854 | MsG0480021507.01.T01:CDS |
TTTCAGCTATTGAGTGGACT+TGG | 0.495648 | 4:+58776571 | MsG0480021507.01.T01:CDS |
TTCTTACAGCATCTTTGGTA+GGG | 0.496479 | 4:-58775807 | None:intergenic |
TATATCAGCTGATAAATGTC+GGG | 0.508266 | 4:-58777237 | None:intergenic |
CTCTTGTAAAACAGGGCACC+CGG | 0.510591 | 4:-58776278 | None:intergenic |
TGTGTCAAATTGTGAAATGT+AGG | 0.523067 | 4:-58776835 | None:intergenic |
CTATATCAGCTGATAAATGT+CGG | 0.523803 | 4:-58777238 | None:intergenic |
AATACACACTGAGCAGCATA+TGG | 0.524125 | 4:-58776550 | None:intergenic |
ATGTATCAACTACAGAGGTC+AGG | 0.533741 | 4:-58776495 | None:intergenic |
TGGAAATTCTTCAGATACCT+GGG | 0.533858 | 4:+58776932 | MsG0480021507.01.T01:CDS |
TGTCCATTCTTACCTGCAGC+AGG | 0.534614 | 4:-58778818 | None:intergenic |
CTAGGAAAACGAATACCGTT+AGG | 0.547272 | 4:-58776190 | None:intergenic |
GATGGAGAGCATCCTTTGTA+CGG | 0.548823 | 4:-58776807 | None:intergenic |
GATGGTTAACTCCTTTAATG+TGG | 0.549610 | 4:-58776356 | None:intergenic |
TGTGAAATGTAGGAAGGAGA+TGG | 0.553413 | 4:-58776825 | None:intergenic |
CAAGATCTTGAACTTTCACT+AGG | 0.553456 | 4:+58776073 | MsG0480021507.01.T01:CDS |
GTTGTTGATGGTGACAAAGT+TGG | 0.555910 | 4:+58776016 | MsG0480021507.01.T01:CDS |
ATCCAAAGACATGATGTGGC+GGG | 0.561807 | 4:+58775730 | MsG0480021507.01.T01:CDS |
TCTGTGTTGATTCCTGCTGC+AGG | 0.565504 | 4:+58778806 | MsG0480021507.01.T01:CDS |
CTACAGAGGTCAGGTTAACA+GGG | 0.566349 | 4:-58776486 | None:intergenic |
ACTTGACGACACAACACTCT+GGG | 0.567342 | 4:-58777301 | None:intergenic |
AAAATAAAACGTACCACCCC+AGG | 0.568996 | 4:-58776949 | None:intergenic |
AGAGAAGATTTGAAACAGCA+AGG | 0.573873 | 4:-58777107 | None:intergenic |
TGTGTATTTCAGCTATTGAG+TGG | 0.574330 | 4:+58776565 | MsG0480021507.01.T01:CDS |
ACCACTAATTTCTTCAGGCT+AGG | 0.574715 | 4:-58776208 | None:intergenic |
AACTGACATCTCATCTGCAA+AGG | 0.580887 | 4:-58776242 | None:intergenic |
TAAAATCCAAAGACATGATG+TGG | 0.581453 | 4:+58775726 | MsG0480021507.01.T01:CDS |
CGGAACCAATTGGAAGATGT+AGG | 0.584735 | 4:+58777278 | MsG0480021507.01.T01:CDS |
ATTTGAAACAGCAAGGCACT+GGG | 0.586718 | 4:-58777100 | None:intergenic |
TCAAATTGTGAAATGTAGGA+AGG | 0.595640 | 4:-58776831 | None:intergenic |
ACTATATAATAATACTCTTG+AGG | 0.601018 | 4:+58776612 | MsG0480021507.01.T01:CDS |
ATCAGCTGATATAGAGAAGG+TGG | 0.601354 | 4:+58777247 | MsG0480021507.01.T01:CDS |
TTTATCAGCTGATATAGAGA+AGG | 0.618952 | 4:+58777244 | MsG0480021507.01.T01:CDS |
ACTGTAATAGTCAAAATCGA+TGG | 0.624529 | 4:-58776374 | None:intergenic |
CTAGTGTCTTTACCGTACAA+AGG | 0.625332 | 4:+58776795 | MsG0480021507.01.T01:intron |
AGGCAGGCGTAGATCATGGT+CGG | 0.634363 | 4:+58775688 | None:intergenic |
AATCCAAAGACATGATGTGG+CGG | 0.634648 | 4:+58775729 | MsG0480021507.01.T01:CDS |
TTCACTCTACATATTCCTAA+CGG | 0.643303 | 4:+58776175 | MsG0480021507.01.T01:CDS |
CATGATTAGCAATTTACCTG+AGG | 0.650665 | 4:+58775756 | MsG0480021507.01.T01:CDS |
TCGAAAGATGAGAAACTATG+TGG | 0.659887 | 4:-58776121 | None:intergenic |
TGGTCGACTCTTGTAAAACA+GGG | 0.662688 | 4:-58776285 | None:intergenic |
GTGATTGGGAGAATTTAGAG+CGG | 0.667154 | 4:+58776317 | MsG0480021507.01.T01:CDS |
AATAGATGTATCAACTACAG+AGG | 0.675392 | 4:-58776500 | None:intergenic |
AATTCTTCAGATACCTGGGG+TGG | 0.693865 | 4:+58776936 | MsG0480021507.01.T01:CDS |
GGAAATTCTTCAGATACCTG+GGG | 0.696280 | 4:+58776933 | MsG0480021507.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTATTATGATAAATTTGA+AGG | - | Chr4:58778318-58778337 | None:intergenic | 10.0% |
!!! | TTATGCTTTTTAAATTTTTA+TGG | + | Chr4:58777137-58777156 | MsG0480021507.01.T01:CDS | 10.0% |
!! | AATAAAAACAAAGAAAGAAA+TGG | - | Chr4:58777356-58777375 | None:intergenic | 15.0% |
!! | TAAATGATTTATAGAATGTT+TGG | + | Chr4:58777797-58777816 | MsG0480021507.01.T01:intron | 15.0% |
!! | TAACTAATAAATTCAAGTAA+AGG | + | Chr4:58777997-58778016 | MsG0480021507.01.T01:intron | 15.0% |
!!! | ACTGTATCAATTTATTTTAT+TGG | + | Chr4:58777496-58777515 | MsG0480021507.01.T01:intron | 15.0% |
!! | AAAGAAAAATCAAAAGAACA+CGG | + | Chr4:58775912-58775931 | MsG0480021507.01.T01:intron | 20.0% |
!! | AACATATTTAAACCATAGTT+AGG | + | Chr4:58777736-58777755 | MsG0480021507.01.T01:intron | 20.0% |
!! | AACTATGGTTTAAATATGTT+GGG | - | Chr4:58777736-58777755 | None:intergenic | 20.0% |
!! | ACTATATAATAATACTCTTG+AGG | + | Chr4:58776612-58776631 | MsG0480021507.01.T01:CDS | 20.0% |
!! | GTTGATATAAAACTACATTA+AGG | - | Chr4:58778209-58778228 | None:intergenic | 20.0% |
!! | TAACTATGGTTTAAATATGT+TGG | - | Chr4:58777737-58777756 | None:intergenic | 20.0% |
!!! | AATATTTTTAGTATGTGAAG+TGG | + | Chr4:58778343-58778362 | MsG0480021507.01.T01:intron | 20.0% |
!!! | ATATTTTTAGTATGTGAAGT+GGG | + | Chr4:58778344-58778363 | MsG0480021507.01.T01:intron | 20.0% |
!!! | TAAATTAGTTCTTTCAGATT+TGG | + | Chr4:58778400-58778419 | MsG0480021507.01.T01:intron | 20.0% |
! | AAAATGTACGAAGTCTATAT+TGG | + | Chr4:58778114-58778133 | MsG0480021507.01.T01:intron | 25.0% |
! | AAATGTACGAAGTCTATATT+GGG | + | Chr4:58778115-58778134 | MsG0480021507.01.T01:intron | 25.0% |
! | AGTGAGTAAAATATTTACAC+TGG | + | Chr4:58778712-58778731 | MsG0480021507.01.T01:intron | 25.0% |
! | ATAATACCTAATGAGAATGT+TGG | + | Chr4:58776698-58776717 | MsG0480021507.01.T01:intron | 25.0% |
! | ATCTCGTAATTAAATCTAAG+AGG | - | Chr4:58775945-58775964 | None:intergenic | 25.0% |
! | ATGTTTAGTGATTCTTGATT+AGG | + | Chr4:58777040-58777059 | MsG0480021507.01.T01:intron | 25.0% |
! | CATTCCATAATATAAAAGTG+TGG | + | Chr4:58777408-58777427 | MsG0480021507.01.T01:intron | 25.0% |
! | GATTTATAGAATGTTTGGTT+AGG | + | Chr4:58777802-58777821 | MsG0480021507.01.T01:intron | 25.0% |
! | TAAATTGATACAGTTCACAA+AGG | - | Chr4:58777490-58777509 | None:intergenic | 25.0% |
! | TCATTTAATCGCATGTATTT+AGG | - | Chr4:58777784-58777803 | None:intergenic | 25.0% |
! | TGTTTCAATTTCCACATTAA+AGG | + | Chr4:58776345-58776364 | MsG0480021507.01.T01:CDS | 25.0% |
! | TTAAAAAATGCCCCATATTT+GGG | + | Chr4:58777194-58777213 | MsG0480021507.01.T01:CDS | 25.0% |
! | TTAACAGGGATAATATCTAT+TGG | - | Chr4:58776475-58776494 | None:intergenic | 25.0% |
! | TTGAACAGTTTGAAAATCAA+AGG | - | Chr4:58775881-58775900 | None:intergenic | 25.0% |
!! | TCAACCACACTTTTATATTA+TGG | - | Chr4:58777415-58777434 | None:intergenic | 25.0% |
!! | TCTTTGGATTTTATGCATAT+CGG | - | Chr4:58775719-58775738 | None:intergenic | 25.0% |
!!! | ACATTTAAAAGTGTTGTTGA+TGG | + | Chr4:58776004-58776023 | MsG0480021507.01.T01:CDS | 25.0% |
!!! | CTTTTCTTTTGATTTGACTT+AGG | + | Chr4:58778489-58778508 | MsG0480021507.01.T01:intron | 25.0% |
!!! | TTGTTCTTACTTTTTACACT+TGG | + | Chr4:58777567-58777586 | MsG0480021507.01.T01:intron | 25.0% |
AAAATCAAAGGCAGATAAGT+AGG | - | Chr4:58775869-58775888 | None:intergenic | 30.0% | |
AATAGATGTATCAACTACAG+AGG | - | Chr4:58776503-58776522 | None:intergenic | 30.0% | |
AATGGAAACAAAATCACGTT+AGG | - | Chr4:58776774-58776793 | None:intergenic | 30.0% | |
ACTGTAATAGTCAAAATCGA+TGG | - | Chr4:58776377-58776396 | None:intergenic | 30.0% | |
ATCTGAAGAATTTCCAGTTT+AGG | - | Chr4:58776928-58776947 | None:intergenic | 30.0% | |
ATGAAAAGCAAAGCAAAAGA+AGG | - | Chr4:58778535-58778554 | None:intergenic | 30.0% | |
CATTCAATCATACCTAACTA+TGG | - | Chr4:58777751-58777770 | None:intergenic | 30.0% | |
CTATATCAGCTGATAAATGT+CGG | - | Chr4:58777241-58777260 | None:intergenic | 30.0% | |
CTGAGTTCAAATATTTGGTT+AGG | + | Chr4:58778065-58778084 | MsG0480021507.01.T01:intron | 30.0% | |
CTGGTAATTGTCATATTTCA+AGG | + | Chr4:58776983-58777002 | MsG0480021507.01.T01:intron | 30.0% | |
CTTAAAAAATGCCCCATATT+TGG | + | Chr4:58777193-58777212 | MsG0480021507.01.T01:CDS | 30.0% | |
GCTATCTGAGTTCAAATATT+TGG | + | Chr4:58778060-58778079 | MsG0480021507.01.T01:intron | 30.0% | |
GGTAACACAAACTTATCATT+TGG | - | Chr4:58776103-58776122 | None:intergenic | 30.0% | |
TAAAAAATGCCCCATATTTG+GGG | + | Chr4:58777195-58777214 | MsG0480021507.01.T01:CDS | 30.0% | |
TAAAATCCAAAGACATGATG+TGG | + | Chr4:58775726-58775745 | MsG0480021507.01.T01:CDS | 30.0% | |
TAGATGTTGGAACACTTAAA+TGG | + | Chr4:58777912-58777931 | MsG0480021507.01.T01:intron | 30.0% | |
TATATCAGCTGATAAATGTC+GGG | - | Chr4:58777240-58777259 | None:intergenic | 30.0% | |
TCAAATTGTGAAATGTAGGA+AGG | - | Chr4:58776834-58776853 | None:intergenic | 30.0% | |
TGTGTCAAATTGTGAAATGT+AGG | - | Chr4:58776838-58776857 | None:intergenic | 30.0% | |
TTCACTCTACATATTCCTAA+CGG | + | Chr4:58776175-58776194 | MsG0480021507.01.T01:CDS | 30.0% | |
TTTATCAGCTGATATAGAGA+AGG | + | Chr4:58777244-58777263 | MsG0480021507.01.T01:CDS | 30.0% | |
TTTCATTGTTAGGGACATAT+GGG | + | Chr4:58778549-58778568 | MsG0480021507.01.T01:intron | 30.0% | |
! | TTCGTCTTACTGTGAATTTT+GGG | + | Chr4:58777664-58777683 | MsG0480021507.01.T01:intron | 30.0% |
! | TTTCACTGATGAAGTACTAA+TGG | + | Chr4:58776885-58776904 | MsG0480021507.01.T01:CDS | 30.0% |
! | TTTCGTCTTACTGTGAATTT+TGG | + | Chr4:58777663-58777682 | MsG0480021507.01.T01:intron | 30.0% |
! | TTTTCATTGTTAGGGACATA+TGG | + | Chr4:58778548-58778567 | MsG0480021507.01.T01:intron | 30.0% |
!! | TGCTTTGCTTTTCATTGTTA+GGG | + | Chr4:58778540-58778559 | MsG0480021507.01.T01:intron | 30.0% |
!! | TTGCTTTGCTTTTCATTGTT+AGG | + | Chr4:58778539-58778558 | MsG0480021507.01.T01:intron | 30.0% |
!!! | CAAGTTCTAGATTCTTTTTG+AGG | - | Chr4:58777620-58777639 | None:intergenic | 30.0% |
!!! | TAACTTTTGCTGTTGTTTTC+AGG | + | Chr4:58778775-58778794 | MsG0480021507.01.T01:intron | 30.0% |
AAAAAATGCCCCATATTTGG+GGG | + | Chr4:58777196-58777215 | MsG0480021507.01.T01:CDS | 35.0% | |
AACCACTCTAAACACTTAGA+CGG | - | Chr4:58777549-58777568 | None:intergenic | 35.0% | |
AATATGACAATTACCAGCAC+TGG | - | Chr4:58776980-58776999 | None:intergenic | 35.0% | |
ACACATCTTTATGTGTTTCG+TGG | + | Chr4:58776853-58776872 | MsG0480021507.01.T01:CDS | 35.0% | |
AGAGATAGACACTTAAACGT+GGG | + | Chr4:58777938-58777957 | MsG0480021507.01.T01:intron | 35.0% | |
CAAGATCTTGAACTTTCACT+AGG | + | Chr4:58776073-58776092 | MsG0480021507.01.T01:CDS | 35.0% | |
CACATCTTTATGTGTTTCGT+GGG | + | Chr4:58776854-58776873 | MsG0480021507.01.T01:CDS | 35.0% | |
CAGAAACCACTAATTTCTTC+AGG | - | Chr4:58776216-58776235 | None:intergenic | 35.0% | |
CAGCATATGGTTCACAAATA+GGG | - | Chr4:58776540-58776559 | None:intergenic | 35.0% | |
CATGATTAGCAATTTACCTG+AGG | + | Chr4:58775756-58775775 | MsG0480021507.01.T01:CDS | 35.0% | |
CTTCACAACAGAAGCTATTA+AGG | - | Chr4:58776044-58776063 | None:intergenic | 35.0% | |
GAATGTTTGGTTAGGTCTTT+AGG | + | Chr4:58777810-58777829 | MsG0480021507.01.T01:intron | 35.0% | |
GACCATTTACGATTGTGATT+GGG | + | Chr4:58776303-58776322 | MsG0480021507.01.T01:CDS | 35.0% | |
GATGGTTAACTCCTTTAATG+TGG | - | Chr4:58776359-58776378 | None:intergenic | 35.0% | |
TACGGTAAAGACACTAGTAA+TGG | - | Chr4:58776792-58776811 | None:intergenic | 35.0% | |
TAGAGAAGGTGGATGATATT+CGG | + | Chr4:58777258-58777277 | MsG0480021507.01.T01:CDS | 35.0% | |
TCATTGACCAAACTGTGTTT+AGG | + | Chr4:58776145-58776164 | MsG0480021507.01.T01:CDS | 35.0% | |
TCGAAAGATGAGAAACTATG+TGG | - | Chr4:58776124-58776143 | None:intergenic | 35.0% | |
TCTTTCAAACTTCAGCTAAG+TGG | + | Chr4:58777640-58777659 | MsG0480021507.01.T01:intron | 35.0% | |
TGGAAATTCTTCAGATACCT+GGG | + | Chr4:58776932-58776951 | MsG0480021507.01.T01:CDS | 35.0% | |
TGTGTATTTCAGCTATTGAG+TGG | + | Chr4:58776565-58776584 | MsG0480021507.01.T01:CDS | 35.0% | |
TTACAGCCAACATTCTCATT+AGG | - | Chr4:58776707-58776726 | None:intergenic | 35.0% | |
TTCATTGTTAGGGACATATG+GGG | + | Chr4:58778550-58778569 | MsG0480021507.01.T01:intron | 35.0% | |
TTCTTACAGCATCTTTGGTA+GGG | - | Chr4:58775810-58775829 | None:intergenic | 35.0% | |
TTTCCAGTTTAGGAGTCTTT+AGG | - | Chr4:58776918-58776937 | None:intergenic | 35.0% | |
! | AGAGAAGATTTGAAACAGCA+AGG | - | Chr4:58777110-58777129 | None:intergenic | 35.0% |
! | TCAGTTCAACAACTTTTCTC+CGG | + | Chr4:58776259-58776278 | MsG0480021507.01.T01:CDS | 35.0% |
!! | ATAGTGGAGAGGAAACTTTT+AGG | + | Chr4:58777851-58777870 | MsG0480021507.01.T01:intron | 35.0% |
!! | CTTTAGGATCATGTGAAGTA+TGG | + | Chr4:58777826-58777845 | MsG0480021507.01.T01:intron | 35.0% |
!! | TACTGTGAATTTTGGGAAAC+TGG | + | Chr4:58777671-58777690 | MsG0480021507.01.T01:intron | 35.0% |
!! | TTTATTTTCTTCACCAGTGC+TGG | + | Chr4:58776964-58776983 | MsG0480021507.01.T01:intron | 35.0% |
AAAATAAAACGTACCACCCC+AGG | - | Chr4:58776952-58776971 | None:intergenic | 40.0% | |
AACCGTCTAAGTGTTTAGAG+TGG | + | Chr4:58777544-58777563 | MsG0480021507.01.T01:intron | 40.0% | |
AACTGACATCTCATCTGCAA+AGG | - | Chr4:58776245-58776264 | None:intergenic | 40.0% | |
AAGATGTGTGTGTGATTGAG+GGG | + | Chr4:58778581-58778600 | MsG0480021507.01.T01:intron | 40.0% | |
AATACACACTGAGCAGCATA+TGG | - | Chr4:58776553-58776572 | None:intergenic | 40.0% | |
AATCCAAAGACATGATGTGG+CGG | + | Chr4:58775729-58775748 | MsG0480021507.01.T01:CDS | 40.0% | |
ACCACTAATTTCTTCAGGCT+AGG | - | Chr4:58776211-58776230 | None:intergenic | 40.0% | |
AGCAAAGCAAAAGAAGGTTG+AGG | - | Chr4:58778529-58778548 | None:intergenic | 40.0% | |
ATCAGCTGATATAGAGAAGG+TGG | + | Chr4:58777247-58777266 | MsG0480021507.01.T01:CDS | 40.0% | |
ATCTGAAGAAGAACTTCCTC+AGG | - | Chr4:58775775-58775794 | None:intergenic | 40.0% | |
ATCTTGATCTCCCCCAAATA+TGG | - | Chr4:58777209-58777228 | None:intergenic | 40.0% | |
ATGTATCAACTACAGAGGTC+AGG | - | Chr4:58776498-58776517 | None:intergenic | 40.0% | |
ATTGGACAAACTCTGTTTGC+CGG | + | Chr4:58777514-58777533 | MsG0480021507.01.T01:intron | 40.0% | |
CAACAGCAAAAGTTAGACCA+AGG | - | Chr4:58778770-58778789 | None:intergenic | 40.0% | |
CATGAAGATGACGAGCAAAT+AGG | - | Chr4:58776646-58776665 | None:intergenic | 40.0% | |
CATGTGAAGTATGGACATAG+TGG | + | Chr4:58777835-58777854 | MsG0480021507.01.T01:intron | 40.0% | |
CCAAAAACCGTGTTATGCTT+TGG | - | Chr4:58777597-58777616 | None:intergenic | 40.0% | |
CGACCATTTACGATTGTGAT+TGG | + | Chr4:58776302-58776321 | MsG0480021507.01.T01:CDS | 40.0% | |
CTAGGAAAACGAATACCGTT+AGG | - | Chr4:58776193-58776212 | None:intergenic | 40.0% | |
CTAGTGTCTTTACCGTACAA+AGG | + | Chr4:58776795-58776814 | MsG0480021507.01.T01:intron | 40.0% | |
CTCCCAATCACAATCGTAAA+TGG | - | Chr4:58776308-58776327 | None:intergenic | 40.0% | |
CTGGAAATTCTTCAGATACC+TGG | + | Chr4:58776931-58776950 | MsG0480021507.01.T01:CDS | 40.0% | |
CTTGAGTCCTAAACACAGTT+TGG | - | Chr4:58776155-58776174 | None:intergenic | 40.0% | |
GAAGATGTGTGTGTGATTGA+GGG | + | Chr4:58778580-58778599 | MsG0480021507.01.T01:intron | 40.0% | |
GAGAGATAGACACTTAAACG+TGG | + | Chr4:58777937-58777956 | MsG0480021507.01.T01:intron | 40.0% | |
GCAGCATATGGTTCACAAAT+AGG | - | Chr4:58776541-58776560 | None:intergenic | 40.0% | |
GGAAATTCTTCAGATACCTG+GGG | + | Chr4:58776933-58776952 | MsG0480021507.01.T01:CDS | 40.0% | |
GGAAGTTCTTACAGCATCTT+TGG | - | Chr4:58775815-58775834 | None:intergenic | 40.0% | |
GGATGATATTCGGAACCAAT+TGG | + | Chr4:58777268-58777287 | MsG0480021507.01.T01:CDS | 40.0% | |
GTGATTGGGAGAATTTAGAG+CGG | + | Chr4:58776317-58776336 | MsG0480021507.01.T01:CDS | 40.0% | |
GTGTTCCAACATCTAAGCAT+TGG | - | Chr4:58777907-58777926 | None:intergenic | 40.0% | |
GTTCTTACAGCATCTTTGGT+AGG | - | Chr4:58775811-58775830 | None:intergenic | 40.0% | |
TCATTGTTAGGGACATATGG+GGG | + | Chr4:58778551-58778570 | MsG0480021507.01.T01:intron | 40.0% | |
TCCTAGCCTGAAGAAATTAG+TGG | + | Chr4:58776207-58776226 | MsG0480021507.01.T01:CDS | 40.0% | |
TCTCCTAAAGACTCCTAAAC+TGG | + | Chr4:58776912-58776931 | MsG0480021507.01.T01:CDS | 40.0% | |
TCTTGATCTCCCCCAAATAT+GGG | - | Chr4:58777208-58777227 | None:intergenic | 40.0% | |
TGATTAGGTGCTTGACTACT+TGG | + | Chr4:58777055-58777074 | MsG0480021507.01.T01:intron | 40.0% | |
TGGCATACCAAAGCATAACA+CGG | + | Chr4:58777587-58777606 | MsG0480021507.01.T01:intron | 40.0% | |
TGTGAAATGTAGGAAGGAGA+TGG | - | Chr4:58776828-58776847 | None:intergenic | 40.0% | |
! | AGTGTTGTGTCGTCAAGTTT+TGG | + | Chr4:58777306-58777325 | MsG0480021507.01.T01:CDS | 40.0% |
! | ATGGTCGACTCTTGTAAAAC+AGG | - | Chr4:58776289-58776308 | None:intergenic | 40.0% |
! | ATTTGAAACAGCAAGGCACT+GGG | - | Chr4:58777103-58777122 | None:intergenic | 40.0% |
! | CAGTTCAACAACTTTTCTCC+GGG | + | Chr4:58776260-58776279 | MsG0480021507.01.T01:CDS | 40.0% |
! | CCAAAGCATAACACGGTTTT+TGG | + | Chr4:58777594-58777613 | MsG0480021507.01.T01:intron | 40.0% |
! | GGTAATGCAAGTTGAACTTG+AGG | + | Chr4:58778018-58778037 | MsG0480021507.01.T01:intron | 40.0% |
! | GTGTTTGGAACAAGTTTCAC+AGG | + | Chr4:58778443-58778462 | MsG0480021507.01.T01:intron | 40.0% |
! | TGGTCGACTCTTGTAAAACA+GGG | - | Chr4:58776288-58776307 | None:intergenic | 40.0% |
! | TTTCAGCTATTGAGTGGACT+TGG | + | Chr4:58776571-58776590 | MsG0480021507.01.T01:CDS | 40.0% |
!! | ACTTTTAGCTACAGGGTGTT+TGG | + | Chr4:58778428-58778447 | MsG0480021507.01.T01:intron | 40.0% |
!! | GTTGTTGATGGTGACAAAGT+TGG | + | Chr4:58776016-58776035 | MsG0480021507.01.T01:CDS | 40.0% |
!!! | GGTTGCTACTTTTAGCTACA+GGG | + | Chr4:58778421-58778440 | MsG0480021507.01.T01:intron | 40.0% |
!!! | TGGTTGCTACTTTTAGCTAC+AGG | + | Chr4:58778420-58778439 | MsG0480021507.01.T01:intron | 40.0% |
AAACCTCTCACTTTCCACAC+AGG | - | Chr4:58777972-58777991 | None:intergenic | 45.0% | |
AAACTCTGTTTGCCGGGAAT+TGG | + | Chr4:58777521-58777540 | MsG0480021507.01.T01:intron | 45.0% | |
AACTTGACGACACAACACTC+TGG | - | Chr4:58777305-58777324 | None:intergenic | 45.0% | |
AATTCTTCAGATACCTGGGG+TGG | + | Chr4:58776936-58776955 | MsG0480021507.01.T01:CDS | 45.0% | |
ACTACAGAGGTCAGGTTAAC+AGG | - | Chr4:58776490-58776509 | None:intergenic | 45.0% | |
ACTTAGACGGTTCCAATTCC+CGG | - | Chr4:58777536-58777555 | None:intergenic | 45.0% | |
ACTTGACGACACAACACTCT+GGG | - | Chr4:58777304-58777323 | None:intergenic | 45.0% | |
AGCATCTTTGGTAGGGAGTA+AGG | - | Chr4:58775803-58775822 | None:intergenic | 45.0% | |
ATCCAAAGACATGATGTGGC+GGG | + | Chr4:58775730-58775749 | MsG0480021507.01.T01:CDS | 45.0% | |
ATTCCTGCTGCAGGTAAGAA+TGG | + | Chr4:58778815-58778834 | MsG0480021507.01.T01:CDS | 45.0% | |
CATTGTTAGGGACATATGGG+GGG | + | Chr4:58778552-58778571 | MsG0480021507.01.T01:intron | 45.0% | |
CGGAACCAATTGGAAGATGT+AGG | + | Chr4:58777278-58777297 | MsG0480021507.01.T01:CDS | 45.0% | |
CTACAGAGGTCAGGTTAACA+GGG | - | Chr4:58776489-58776508 | None:intergenic | 45.0% | |
CTTCCGCATTAGCAAACAAG+TGG | + | Chr4:58775830-58775849 | MsG0480021507.01.T01:intron | 45.0% | |
CTTGATCTCCCCCAAATATG+GGG | - | Chr4:58777207-58777226 | None:intergenic | 45.0% | |
GGAAGATGTGTGTGTGATTG+AGG | + | Chr4:58778579-58778598 | MsG0480021507.01.T01:intron | 45.0% | |
GTGGAACACATTGAATGCCT+TGG | + | Chr4:58778750-58778769 | MsG0480021507.01.T01:intron | 45.0% | |
TCACTTTCCACACAGGAACT+GGG | - | Chr4:58777965-58777984 | None:intergenic | 45.0% | |
TTCAGCTGTATGCTTAAGCG+TGG | + | Chr4:58777875-58777894 | MsG0480021507.01.T01:intron | 45.0% | |
TTGGACAAACTCTGTTTGCC+GGG | + | Chr4:58777515-58777534 | MsG0480021507.01.T01:intron | 45.0% | |
! | CCTCCACTTGTTTGCTAATG+CGG | - | Chr4:58775836-58775855 | None:intergenic | 45.0% |
! | CTGGCTGTTTCATTGTTACG+TGG | + | Chr4:58778731-58778750 | MsG0480021507.01.T01:intron | 45.0% |
! | GAAGTATGGACATAGTGGAG+AGG | + | Chr4:58777840-58777859 | MsG0480021507.01.T01:intron | 45.0% |
! | GATTTGAAACAGCAAGGCAC+TGG | - | Chr4:58777104-58777123 | None:intergenic | 45.0% |
!! | CAAACAAGTGGAGGCACTTA+TGG | + | Chr4:58775842-58775861 | MsG0480021507.01.T01:intron | 45.0% |
!! | GATGGAGAGCATCCTTTGTA+CGG | - | Chr4:58776810-58776829 | None:intergenic | 45.0% |
!! | TCCAACATCTAAGCATTGGC+CGG | - | Chr4:58777903-58777922 | None:intergenic | 45.0% |
CCGCATTAGCAAACAAGTGG+AGG | + | Chr4:58775833-58775852 | MsG0480021507.01.T01:intron | 50.0% | |
CTCACTTTCCACACAGGAAC+TGG | - | Chr4:58777966-58777985 | None:intergenic | 50.0% | |
CTGGGCCTACATCTTCCAAT+TGG | - | Chr4:58777286-58777305 | None:intergenic | 50.0% | |
GTTCCTGTGTGGAAAGTGAG+AGG | + | Chr4:58777966-58777985 | MsG0480021507.01.T01:intron | 50.0% | |
TAGGGACATATGGGGGGATT+TGG | + | Chr4:58778558-58778577 | MsG0480021507.01.T01:intron | 50.0% | |
TCCGGCCAATGCTTAGATGT+TGG | + | Chr4:58777899-58777918 | MsG0480021507.01.T01:intron | 50.0% | |
TGTATGCTTAAGCGTGGCTC+CGG | + | Chr4:58777881-58777900 | MsG0480021507.01.T01:intron | 50.0% | |
TGTCCATTCTTACCTGCAGC+AGG | - | Chr4:58778821-58778840 | None:intergenic | 50.0% | |
! | CTCTTGTAAAACAGGGCACC+CGG | - | Chr4:58776281-58776300 | None:intergenic | 50.0% |
!! | TCTGTGTTGATTCCTGCTGC+AGG | + | Chr4:58778806-58778825 | MsG0480021507.01.T01:CDS | 50.0% |
ATGTCATAGTGTGCGAGCGC+AGG | - | Chr4:58777713-58777732 | None:intergenic | 55.0% | |
TGTCATAGTGTGCGAGCGCA+GGG | - | Chr4:58777712-58777731 | None:intergenic | 55.0% | |
ATAGTGTGCGAGCGCAGGGT+GGG | - | Chr4:58777708-58777727 | None:intergenic | 60.0% | |
CGCCCGCCACATCATGTCTT+TGG | - | Chr4:58775735-58775754 | None:intergenic | 60.0% | |
CATAGTGTGCGAGCGCAGGG+TGG | - | Chr4:58777709-58777728 | None:intergenic | 65.0% | |
CGTGGGTCCCAGTTCCTGTG+TGG | + | Chr4:58777955-58777974 | MsG0480021507.01.T01:intron | 65.0% | |
TAGTGTGCGAGCGCAGGGTG+GGG | - | Chr4:58777707-58777726 | None:intergenic | 65.0% | |
AGTGTGCGAGCGCAGGGTGG+GGG | - | Chr4:58777706-58777725 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 58775703 | 58778853 | 58775703 | ID=MsG0480021507.01;Name=MsG0480021507.01 |
Chr4 | mRNA | 58775703 | 58778853 | 58775703 | ID=MsG0480021507.01.T01;Parent=MsG0480021507.01;Name=MsG0480021507.01.T01;_AED=0.51;_eAED=0.51;_QI=0|0|0|0.83|1|1|6|0|430 |
Chr4 | exon | 58775703 | 58775822 | 58775703 | ID=MsG0480021507.01.T01:exon:19686;Parent=MsG0480021507.01.T01 |
Chr4 | exon | 58775989 | 58776633 | 58775989 | ID=MsG0480021507.01.T01:exon:19687;Parent=MsG0480021507.01.T01 |
Chr4 | exon | 58776799 | 58776957 | 58776799 | ID=MsG0480021507.01.T01:exon:19688;Parent=MsG0480021507.01.T01 |
Chr4 | exon | 58777062 | 58777327 | 58777062 | ID=MsG0480021507.01.T01:exon:19689;Parent=MsG0480021507.01.T01 |
Chr4 | exon | 58778667 | 58778712 | 58778667 | ID=MsG0480021507.01.T01:exon:19690;Parent=MsG0480021507.01.T01 |
Chr4 | exon | 58778797 | 58778853 | 58778797 | ID=MsG0480021507.01.T01:exon:19691;Parent=MsG0480021507.01.T01 |
Chr4 | CDS | 58775703 | 58775822 | 58775703 | ID=MsG0480021507.01.T01:cds;Parent=MsG0480021507.01.T01 |
Chr4 | CDS | 58775989 | 58776633 | 58775989 | ID=MsG0480021507.01.T01:cds;Parent=MsG0480021507.01.T01 |
Chr4 | CDS | 58776799 | 58776957 | 58776799 | ID=MsG0480021507.01.T01:cds;Parent=MsG0480021507.01.T01 |
Chr4 | CDS | 58777062 | 58777327 | 58777062 | ID=MsG0480021507.01.T01:cds;Parent=MsG0480021507.01.T01 |
Chr4 | CDS | 58778667 | 58778712 | 58778667 | ID=MsG0480021507.01.T01:cds;Parent=MsG0480021507.01.T01 |
Chr4 | CDS | 58778797 | 58778853 | 58778797 | ID=MsG0480021507.01.T01:cds;Parent=MsG0480021507.01.T01 |
Gene Sequence |
Protein sequence |