AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036908.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036908.01.T01 MTR_7g023310 79.039 458 66 4 1 429 1 457 0.0 671
MsG0780036908.01.T01 MTR_7g023330 60.486 453 92 4 5 428 1 395 1.24e-176 499
MsG0780036908.01.T01 MTR_4g080787 45.359 474 202 10 1 428 1 463 2.37e-113 342
MsG0780036908.01.T01 MTR_4g080590 44.298 456 221 9 1 428 1 451 4.13e-113 340
MsG0780036908.01.T01 MTR_4g080773 44.280 472 213 8 1 428 1 466 1.46e-110 334
MsG0780036908.01.T01 MTR_4g080773 44.280 472 213 8 1 428 1 466 1.99e-110 334
MsG0780036908.01.T01 MTR_3g048290 45.064 466 216 9 1 428 1 464 1.72e-108 328
MsG0780036908.01.T01 MTR_4g080590 45.304 362 171 6 1 338 1 359 2.23e-90 278
MsG0780036908.01.T01 MTR_4g130200 39.762 420 208 6 15 428 11 391 5.72e-90 278
MsG0780036908.01.T01 MTR_5g039950 41.628 430 220 10 1 419 1 410 3.22e-89 277
MsG0780036908.01.T01 MTR_5g039970 47.975 321 137 3 7 297 2 322 8.83e-84 260
MsG0780036908.01.T01 MTR_7g039630 40.108 369 156 5 1 337 1 336 2.39e-71 228
MsG0780036908.01.T01 MTR_4g080807 38.611 360 157 5 92 422 1 325 1.81e-64 213
MsG0780036908.01.T01 MTR_4g081030 34.889 450 199 12 9 428 2 387 6.78e-64 211
MsG0780036908.01.T01 MTR_2g094750 38.791 397 184 13 10 347 71 467 2.29e-62 209
MsG0780036908.01.T01 MTR_5g084070 27.861 402 262 10 15 399 4 394 1.63e-27 114
MsG0780036908.01.T01 MTR_1g115250 26.279 430 257 13 10 405 18 421 7.60e-24 103
MsG0780036908.01.T01 MTR_2g072530 25.000 416 271 12 16 399 5 411 1.33e-23 102
MsG0780036908.01.T01 MTR_7g098570 25.420 417 233 15 4 399 1 360 3.62e-23 102
MsG0780036908.01.T01 MTR_3g107100 25.635 394 243 13 20 403 7 360 4.52e-23 100
MsG0780036908.01.T01 MTR_2g005990 26.214 412 232 14 24 406 6 374 6.82e-23 100
MsG0780036908.01.T01 MTR_5g080710 24.324 407 278 11 14 399 23 420 1.14e-22 100
MsG0780036908.01.T01 MTR_3g107160 25.245 408 234 15 21 407 7 364 1.66e-22 99.0
MsG0780036908.01.T01 MTR_2g007400 27.273 429 237 15 24 423 12 394 1.45e-20 93.6
MsG0780036908.01.T01 MTR_2g008320 27.250 400 223 15 22 401 50 401 1.64e-20 93.6
MsG0780036908.01.T01 MTR_3g099830 26.485 404 206 17 24 402 12 349 6.30e-20 91.3
MsG0780036908.01.T01 MTR_2g008310 26.667 390 228 13 24 401 2 345 1.84e-19 90.1
MsG0780036908.01.T01 MTR_5g005690 27.679 224 153 4 12 229 5 225 2.51e-19 90.5
MsG0780036908.01.T01 MTR_1g041245 24.872 390 239 10 24 402 11 357 3.84e-19 89.0
MsG0780036908.01.T01 MTR_7g056433 25.062 403 241 14 21 408 9 365 7.30e-19 88.2
MsG0780036908.01.T01 MTR_1g053025 25.420 417 256 15 24 423 2 380 7.86e-19 88.2
MsG0780036908.01.T01 MTR_3g107120 25.888 394 236 12 24 399 9 364 9.04e-19 88.2
MsG0780036908.01.T01 MTR_7g007340 26.108 406 208 17 24 411 13 344 1.01e-18 87.8
MsG0780036908.01.T01 MTR_2g072730 26.230 427 257 15 14 397 8 419 1.62e-18 87.8
MsG0780036908.01.T01 MTR_4g080813 56.944 72 30 1 7 78 2 72 1.62e-18 80.9
MsG0780036908.01.T01 MTR_7g094030 26.517 445 226 18 22 401 26 434 1.78e-18 87.8
MsG0780036908.01.T01 MTR_2g007360 28.155 412 185 17 24 401 12 346 1.86e-18 87.0
MsG0780036908.01.T01 MTR_7g098510 26.139 417 246 18 12 416 6 372 2.29e-18 86.7
MsG0780036908.01.T01 MTR_3g036250 24.490 392 227 13 21 399 2 337 4.90e-18 85.5
MsG0780036908.01.T01 MTR_3g108150 26.031 388 233 14 22 399 11 354 7.62e-18 85.1
MsG0780036908.01.T01 MTR_1g082260 33.113 151 98 1 77 224 25 175 9.99e-18 81.3
MsG0780036908.01.T01 MTR_4g045900 23.482 494 273 21 24 428 26 503 1.28e-17 85.5
MsG0780036908.01.T01 MTR_2g007450 25.183 409 241 18 24 399 16 392 1.50e-17 84.7
MsG0780036908.01.T01 MTR_8g467800 25.116 430 268 17 11 399 7 423 1.64e-17 84.7
MsG0780036908.01.T01 MTR_5g058000 27.132 387 218 14 24 399 8 341 3.67e-17 83.2
MsG0780036908.01.T01 MTR_3g108560 24.450 409 251 13 18 417 14 373 4.01e-17 83.2
MsG0780036908.01.T01 MTR_1g021825 25.000 432 263 17 13 411 5 408 3.12e-16 80.9
MsG0780036908.01.T01 MTR_1g021825 25.000 432 263 17 13 411 76 479 3.34e-16 80.9
MsG0780036908.01.T01 MTR_2g082850 25.521 384 231 12 6 346 3 374 3.82e-16 80.1
MsG0780036908.01.T01 MTR_7g098480 23.881 402 241 15 12 399 6 356 4.39e-16 80.5
MsG0780036908.01.T01 MTR_3g108560 28.646 192 127 4 18 208 14 196 5.98e-16 78.6
MsG0780036908.01.T01 MTR_0049s0110 26.290 407 247 18 22 400 6 387 7.43e-16 79.3
MsG0780036908.01.T01 MTR_3g023630 23.604 394 227 14 24 399 8 345 1.36e-15 78.2
MsG0780036908.01.T01 MTR_2g094450 36.842 171 66 7 197 339 31 187 1.42e-15 75.5
MsG0780036908.01.T01 MTR_2g072720 25.116 430 258 15 12 397 31 440 2.38e-15 78.2
MsG0780036908.01.T01 MTR_1g107385 24.654 434 234 17 13 404 18 400 4.13e-15 77.4
MsG0780036908.01.T01 MTR_2g082800 23.958 384 247 14 11 367 16 381 4.56e-15 77.0
MsG0780036908.01.T01 MTR_4g039440 24.356 427 252 20 24 428 34 411 6.74e-15 76.6
MsG0780036908.01.T01 MTR_8g014160 25.120 418 227 17 23 410 40 401 1.01e-14 75.9
MsG0780036908.01.T01 MTR_3g006580 25.000 364 227 10 13 336 22 379 1.03e-14 75.9
MsG0780036908.01.T01 MTR_7g032380 22.917 384 224 11 24 402 11 327 1.12e-14 75.5
MsG0780036908.01.T01 MTR_8g066650 27.920 351 207 14 7 320 56 397 1.56e-14 75.5
MsG0780036908.01.T01 MTR_2g101950 24.000 350 219 8 13 323 68 409 1.67e-14 75.5
MsG0780036908.01.T01 MTR_2g101950 24.000 350 219 8 13 323 69 410 1.70e-14 75.5
MsG0780036908.01.T01 MTR_2g101950 24.000 350 219 8 13 323 27 368 1.89e-14 75.1
MsG0780036908.01.T01 MTR_0049s0110 27.011 348 209 16 22 348 6 329 2.34e-14 74.3
MsG0780036908.01.T01 MTR_0009s0080 25.424 413 244 18 5 399 1 367 3.61e-14 74.3
MsG0780036908.01.T01 MTR_8g468840 26.077 418 258 12 23 399 13 420 4.33e-14 74.3
MsG0780036908.01.T01 MTR_8g058965 25.625 480 263 25 15 428 4 455 5.35e-14 73.9
MsG0780036908.01.T01 MTR_6g025160 28.507 221 144 6 15 229 92 304 5.87e-14 73.2
MsG0780036908.01.T01 MTR_3g040700 23.349 424 241 14 24 421 43 408 6.48e-14 73.6
MsG0780036908.01.T01 MTR_8g445780 24.752 404 261 14 11 385 1 390 9.28e-14 72.8
MsG0780036908.01.T01 MTR_4g050930 26.871 294 183 10 8 290 13 285 1.01e-13 72.8
MsG0780036908.01.T01 MTR_7g056287 24.113 423 236 22 24 423 3 363 1.09e-13 72.4
MsG0780036908.01.T01 MTR_4g134150 28.500 200 123 8 11 204 1 186 1.49e-13 70.1
MsG0780036908.01.T01 MTR_0049s0110 27.219 338 201 16 22 338 6 319 1.52e-13 72.0
MsG0780036908.01.T01 MTR_4g098590 23.350 394 248 10 28 404 3 359 1.99e-13 71.6
MsG0780036908.01.T01 MTR_4g050930 26.871 294 183 10 8 290 13 285 2.07e-13 72.4
MsG0780036908.01.T01 MTR_5g058100 23.039 408 258 13 17 413 2 364 2.47e-13 71.6
MsG0780036908.01.T01 MTR_7g060470 23.393 389 245 12 24 395 3 355 2.53e-13 71.6
MsG0780036908.01.T01 MTR_6g018660 28.451 355 201 17 5 317 1 344 2.69e-13 71.2
MsG0780036908.01.T01 MTR_7g056277 23.902 410 223 19 24 408 259 604 4.47e-13 71.6
MsG0780036908.01.T01 MTR_3g026920 25.298 419 258 16 24 420 19 404 4.61e-13 70.9
MsG0780036908.01.T01 MTR_7g056447 27.368 190 116 5 23 202 8 185 4.66e-13 69.7
MsG0780036908.01.T01 MTR_3g005980 27.869 244 147 8 13 240 7 237 5.32e-13 70.5
MsG0780036908.01.T01 MTR_4g056030 24.344 419 264 16 21 399 6 411 5.79e-13 70.9
MsG0780036908.01.T01 MTR_1g066830 23.485 396 253 16 24 409 8 363 7.93e-13 70.1
MsG0780036908.01.T01 MTR_5g092960 26.218 431 252 17 21 399 16 432 8.16e-13 70.5
MsG0780036908.01.T01 MTR_7g034115 26.044 407 234 17 24 416 11 364 8.24e-13 70.1
MsG0780036908.01.T01 MTR_1g038710 22.782 417 273 16 24 399 19 427 1.01e-12 70.1
MsG0780036908.01.T01 MTR_8g062080 24.344 419 271 15 22 411 21 422 1.15e-12 69.7
MsG0780036908.01.T01 MTR_4g092430 23.691 363 243 11 12 345 31 388 1.20e-12 70.1
MsG0780036908.01.T01 MTR_2g100590 26.667 285 179 14 14 285 32 299 1.32e-12 69.7
MsG0780036908.01.T01 MTR_2g100590 26.667 285 179 14 14 285 32 299 1.47e-12 69.3
MsG0780036908.01.T01 MTR_5g060570 26.957 230 156 6 23 246 16 239 1.63e-12 67.8
MsG0780036908.01.T01 MTR_2g100590 25.965 285 181 13 14 285 32 299 2.06e-12 69.3
MsG0780036908.01.T01 MTR_2g101950 23.151 311 193 7 13 285 69 371 2.27e-12 68.6
MsG0780036908.01.T01 MTR_7g115270 24.048 420 246 17 23 416 11 383 2.30e-12 68.6
MsG0780036908.01.T01 MTR_1g011410 29.688 192 128 5 19 206 310 498 3.03e-12 68.9
MsG0780036908.01.T01 MTR_1g038760 27.003 337 193 12 13 316 4 320 3.66e-12 67.8
MsG0780036908.01.T01 MTR_4g056020 23.373 415 273 14 21 399 6 411 4.29e-12 68.2
MsG0780036908.01.T01 MTR_1g038760 27.003 337 193 12 13 316 4 320 4.34e-12 67.4
MsG0780036908.01.T01 MTR_0049s0110 29.630 189 125 7 22 206 6 190 4.57e-12 66.6
MsG0780036908.01.T01 MTR_4g057725 24.466 421 268 17 24 416 22 420 4.93e-12 67.8
MsG0780036908.01.T01 MTR_1g067190 30.702 228 102 11 11 222 1 188 6.00e-12 67.0
MsG0780036908.01.T01 MTR_8g467800 27.885 208 129 7 11 206 7 205 8.40e-12 66.6
MsG0780036908.01.T01 MTR_2g082860 41.667 72 39 1 1 69 1 72 8.93e-12 62.4
MsG0780036908.01.T01 MTR_3g007830 26.333 300 179 13 23 294 10 295 1.65e-11 65.9
MsG0780036908.01.T01 MTR_3g007790 26.333 300 179 13 23 294 24 309 2.42e-11 65.5
MsG0780036908.01.T01 MTR_5g038430 24.597 248 175 6 14 255 86 327 2.53e-11 65.9
MsG0780036908.01.T01 MTR_8g014290 49.091 55 28 0 23 77 9 63 4.39e-11 61.6
MsG0780036908.01.T01 MTR_1g011430 29.474 190 119 6 24 206 7 188 4.55e-11 64.3
MsG0780036908.01.T01 MTR_2g102420 50.000 70 33 1 270 337 15 84 5.65e-11 59.3
MsG0780036908.01.T01 MTR_7g056420 24.876 402 218 17 23 408 8 341 5.72e-11 65.1
MsG0780036908.01.T01 MTR_7g056430 24.876 402 218 17 23 408 8 341 5.74e-11 65.1
MsG0780036908.01.T01 MTR_4g093690 29.897 194 113 8 24 204 18 201 5.94e-11 63.2
MsG0780036908.01.T01 MTR_3g023270 24.860 358 212 15 15 335 3 340 6.18e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036908.01.T01 AT4G14096 27.679 448 261 15 23 422 7 439 1.72e-29 120
MsG0780036908.01.T01 AT4G14096 27.679 448 261 15 23 422 7 439 1.72e-29 120
MsG0780036908.01.T01 AT3G59210 28.322 459 254 18 22 419 5 449 1.46e-26 112
MsG0780036908.01.T01 AT3G59210 28.322 459 254 18 22 419 5 449 1.46e-26 112
MsG0780036908.01.T01 AT3G59210 28.322 459 254 18 22 419 5 449 1.46e-26 112
MsG0780036908.01.T01 AT3G59210 28.322 459 254 18 22 419 5 449 1.46e-26 112
MsG0780036908.01.T01 AT3G59210 28.322 459 254 18 22 419 5 449 1.46e-26 112
MsG0780036908.01.T01 AT3G59230 26.793 474 263 18 15 419 4 462 6.49e-26 110
MsG0780036908.01.T01 AT4G14103 27.624 362 217 13 18 341 2 356 6.58e-26 108
MsG0780036908.01.T01 AT4G14103 27.624 362 217 13 18 341 2 356 6.58e-26 108
MsG0780036908.01.T01 AT4G14103 27.778 360 215 13 18 339 2 354 1.58e-25 108
MsG0780036908.01.T01 AT1G58310 28.238 386 202 13 18 339 2 376 2.89e-25 108
MsG0780036908.01.T01 AT3G50710 28.954 411 230 16 24 395 2 389 1.60e-24 105
MsG0780036908.01.T01 AT4G10400 24.703 421 287 11 24 428 2 408 7.42e-24 103
MsG0780036908.01.T01 AT4G10400 24.703 421 287 11 24 428 2 408 7.42e-24 103
MsG0780036908.01.T01 AT4G10400 24.703 421 287 11 24 428 2 408 7.42e-24 103
MsG0780036908.01.T01 AT1G66290 25.245 408 262 11 20 397 25 419 2.76e-23 102
MsG0780036908.01.T01 AT3G58860 28.902 346 207 15 24 339 7 343 5.65e-23 101
MsG0780036908.01.T01 AT5G22730 23.982 442 268 12 10 397 5 432 6.42e-23 100
MsG0780036908.01.T01 AT5G22730 23.982 442 268 12 10 397 5 432 6.42e-23 100
MsG0780036908.01.T01 AT5G38590 26.977 430 264 14 24 424 2 410 1.28e-22 99.8
MsG0780036908.01.T01 AT3G59200 27.869 366 203 13 23 337 6 361 1.59e-22 98.6
MsG0780036908.01.T01 AT3G26922 28.033 239 170 1 16 254 6 242 3.52e-22 96.7
MsG0780036908.01.T01 AT3G26922 28.033 239 170 1 16 254 6 242 3.52e-22 96.7
MsG0780036908.01.T01 AT1G32375 25.837 418 256 13 24 409 2 397 9.03e-22 97.4
MsG0780036908.01.T01 AT1G32375 25.837 418 256 13 24 409 2 397 9.03e-22 97.4
MsG0780036908.01.T01 AT3G59250 28.018 439 233 19 23 417 6 405 1.10e-21 97.1
MsG0780036908.01.T01 AT1G78750 25.342 438 276 15 24 419 18 446 1.51e-21 97.1
MsG0780036908.01.T01 AT1G78750 25.342 438 276 15 24 419 18 446 1.51e-21 97.1
MsG0780036908.01.T01 AT3G59200 27.520 367 205 13 22 337 5 361 1.51e-21 97.4
MsG0780036908.01.T01 AT3G59240 25.714 455 268 19 23 422 7 446 1.72e-21 97.1
MsG0780036908.01.T01 AT3G28410 25.522 431 255 18 13 397 13 423 3.99e-21 95.9
MsG0780036908.01.T01 AT4G00315 24.819 415 265 15 24 399 2 408 5.62e-21 95.1
MsG0780036908.01.T01 AT1G55660 25.060 419 269 14 19 399 48 459 6.62e-21 95.1
MsG0780036908.01.T01 AT5G53840 24.711 433 275 11 20 419 14 428 6.79e-21 94.7
MsG0780036908.01.T01 AT5G41840 28.354 395 210 15 11 341 1 386 1.17e-20 94.7
MsG0780036908.01.T01 AT5G02700 25.592 422 253 18 14 397 16 414 1.38e-20 94.0
MsG0780036908.01.T01 AT4G26340 25.694 432 266 14 24 423 2 410 2.03e-20 93.2
MsG0780036908.01.T01 AT4G13985 26.549 452 265 18 20 425 15 445 2.33e-20 93.6
MsG0780036908.01.T01 AT4G22280 25.236 424 273 14 24 423 2 405 4.27e-20 92.4
MsG0780036908.01.T01 AT1G69630 23.947 451 283 13 12 419 6 439 5.67e-20 92.0
MsG0780036908.01.T01 AT5G60610 24.745 392 264 10 24 395 2 382 6.59e-20 91.3
MsG0780036908.01.T01 AT5G60610 24.745 392 264 10 24 395 2 382 6.59e-20 91.3
MsG0780036908.01.T01 AT3G52680 26.728 434 283 13 22 428 19 444 6.63e-20 92.0
MsG0780036908.01.T01 AT4G15060 23.923 418 255 10 1 379 1 394 6.96e-20 91.7
MsG0780036908.01.T01 AT5G56690 25.061 411 258 16 26 400 4 400 1.18e-19 90.9
MsG0780036908.01.T01 AT5G38590 31.280 211 135 5 24 230 2 206 1.19e-19 89.4
MsG0780036908.01.T01 AT2G26860 25.495 404 248 13 24 391 2 388 1.88e-19 90.1
MsG0780036908.01.T01 AT2G26860 25.495 404 248 13 24 391 2 388 1.88e-19 90.1
MsG0780036908.01.T01 AT4G22280 26.923 338 212 10 24 337 2 328 1.93e-19 89.4
MsG0780036908.01.T01 AT1G55030 23.810 441 288 15 17 429 12 432 2.16e-19 90.5
MsG0780036908.01.T01 AT1G55030 23.810 441 288 15 17 429 2 422 2.70e-19 90.1
MsG0780036908.01.T01 AT5G56420 24.557 395 254 10 23 391 5 381 3.47e-19 89.7
MsG0780036908.01.T01 AT5G56420 24.557 395 254 10 23 391 5 381 3.47e-19 89.7
MsG0780036908.01.T01 AT5G56420 24.557 395 254 10 23 391 5 381 3.47e-19 89.7
MsG0780036908.01.T01 AT5G53635 23.786 412 268 12 25 399 1 403 4.06e-19 89.4
MsG0780036908.01.T01 AT3G59190 26.260 377 221 14 22 348 10 379 1.01e-18 87.8
MsG0780036908.01.T01 AT5G56400 26.606 436 275 16 24 428 33 454 1.07e-18 88.6
MsG0780036908.01.T01 AT3G59170 26.490 453 238 18 22 397 5 439 1.32e-18 88.2
MsG0780036908.01.T01 AT3G58880 28.134 359 201 16 24 337 3 349 1.37e-18 88.2
MsG0780036908.01.T01 AT5G56370 25.346 434 248 15 24 420 2 396 2.87e-18 87.0
MsG0780036908.01.T01 AT5G56370 25.346 434 248 15 24 420 2 396 2.87e-18 87.0
MsG0780036908.01.T01 AT1G78840 25.472 424 249 17 21 399 2 403 2.95e-18 87.0
MsG0780036908.01.T01 AT1G78840 25.472 424 249 17 21 399 2 403 2.95e-18 87.0
MsG0780036908.01.T01 AT5G22660 23.923 418 264 12 22 399 11 414 6.26e-18 85.9
MsG0780036908.01.T01 AT3G59190 26.016 369 217 13 22 341 10 371 6.69e-18 86.3
MsG0780036908.01.T01 AT5G56440 26.716 408 255 13 24 399 2 397 1.01e-17 85.1
MsG0780036908.01.T01 AT5G22610 26.316 342 206 13 23 337 17 339 1.02e-17 85.5
MsG0780036908.01.T01 AT4G00160 25.799 438 284 15 22 428 14 441 1.12e-17 85.1
MsG0780036908.01.T01 AT2G42730 27.424 361 210 15 21 339 2 352 1.24e-17 85.1
MsG0780036908.01.T01 AT5G22730 23.622 381 226 10 10 337 5 373 1.32e-17 84.7
MsG0780036908.01.T01 AT4G09920 26.538 260 182 5 24 276 2 259 1.40e-17 83.2
MsG0780036908.01.T01 AT4G09920 26.538 260 182 5 24 276 2 259 1.40e-17 83.2
MsG0780036908.01.T01 AT4G09920 26.538 260 182 5 24 276 2 259 1.40e-17 83.2
MsG0780036908.01.T01 AT3G58900 25.285 439 248 18 24 399 2 423 1.77e-17 84.7
MsG0780036908.01.T01 AT4G09920 26.596 282 189 7 24 289 2 281 2.46e-17 82.8
MsG0780036908.01.T01 AT4G09920 26.596 282 189 7 24 289 2 281 2.46e-17 82.8
MsG0780036908.01.T01 AT3G52680 31.674 221 141 4 22 237 19 234 3.10e-17 83.2
MsG0780036908.01.T01 AT4G15060 26.378 254 172 4 24 273 172 414 8.25e-17 83.2
MsG0780036908.01.T01 AT1G13780 24.171 422 271 13 19 397 5 420 9.36e-17 82.4
MsG0780036908.01.T01 AT3G26922 26.977 215 155 1 40 254 1 213 1.07e-16 80.5
MsG0780036908.01.T01 AT3G26922 26.977 215 155 1 40 254 1 213 1.07e-16 80.5
MsG0780036908.01.T01 AT3G58900 29.091 220 143 8 24 234 2 217 2.52e-16 79.7
MsG0780036908.01.T01 AT5G56390 27.685 419 234 17 24 400 2 393 2.53e-16 80.9
MsG0780036908.01.T01 AT1G06630 28.612 353 200 15 23 337 11 349 2.54e-16 80.5
MsG0780036908.01.T01 AT1G06630 28.612 353 200 15 23 337 11 349 2.54e-16 80.5
MsG0780036908.01.T01 AT1G55660 25.926 216 154 4 19 229 48 262 2.92e-16 80.5
MsG0780036908.01.T01 AT1G16940 23.601 411 239 15 22 396 9 380 3.52e-16 80.5
MsG0780036908.01.T01 AT1G66300 25.137 366 230 9 5 337 14 368 3.96e-16 80.5
MsG0780036908.01.T01 AT3G58900 29.091 220 143 8 24 234 2 217 4.84e-16 79.3
MsG0780036908.01.T01 AT3G58900 29.091 220 143 8 24 234 2 217 4.84e-16 79.3
MsG0780036908.01.T01 AT1G06630 28.612 353 200 15 23 337 11 349 5.24e-16 79.7
MsG0780036908.01.T01 AT1G06630 28.612 353 200 15 23 337 11 349 5.24e-16 79.7
MsG0780036908.01.T01 AT1G06630 28.612 353 200 15 23 337 11 349 5.24e-16 79.7
MsG0780036908.01.T01 AT1G06630 28.612 353 200 15 23 337 11 349 5.24e-16 79.7
MsG0780036908.01.T01 AT1G06630 28.612 353 200 15 23 337 20 358 5.45e-16 79.7
MsG0780036908.01.T01 AT1G16930 25.000 380 238 11 22 367 13 379 6.06e-16 80.1
MsG0780036908.01.T01 AT1G16930 25.000 380 238 11 22 367 13 379 6.06e-16 80.1
MsG0780036908.01.T01 AT1G16930 25.000 380 238 11 22 367 13 379 6.06e-16 80.1
MsG0780036908.01.T01 AT4G27050 26.230 366 202 16 24 337 4 353 6.32e-16 80.1
MsG0780036908.01.T01 AT4G27050 26.230 366 202 16 24 337 4 353 6.32e-16 80.1
MsG0780036908.01.T01 AT4G27050 26.230 366 202 16 24 337 4 353 6.32e-16 80.1
MsG0780036908.01.T01 AT4G27050 26.230 366 202 16 24 337 4 353 6.32e-16 80.1
MsG0780036908.01.T01 AT4G27050 26.230 366 202 16 24 337 4 353 6.32e-16 80.1
MsG0780036908.01.T01 AT4G00320 25.661 378 222 16 16 341 4 374 6.94e-16 80.1
MsG0780036908.01.T01 AT1G66310 25.587 426 264 13 10 399 5 413 7.06e-16 79.7
MsG0780036908.01.T01 AT2G04230 29.439 214 144 5 22 229 11 223 7.17e-16 79.7
MsG0780036908.01.T01 AT4G13965 26.754 228 154 5 24 246 10 229 8.00e-16 79.3
MsG0780036908.01.T01 AT5G44950 24.091 440 267 15 22 416 2 419 8.10e-16 79.7
MsG0780036908.01.T01 AT3G60040 27.151 372 192 14 23 337 12 361 8.12e-16 80.1
MsG0780036908.01.T01 AT5G02930 24.390 369 222 14 8 337 12 362 1.04e-15 79.3
MsG0780036908.01.T01 AT3G60040 27.151 372 192 14 23 337 229 578 1.06e-15 79.7
MsG0780036908.01.T01 AT3G60040 27.151 372 192 14 23 337 231 580 1.07e-15 79.7
MsG0780036908.01.T01 AT3G60040 27.151 372 192 14 23 337 231 580 1.17e-15 79.7
MsG0780036908.01.T01 AT3G60040 27.151 372 192 14 23 337 232 581 1.21e-15 79.7
MsG0780036908.01.T01 AT5G03100 24.611 321 189 11 19 308 4 302 1.32e-15 77.8
MsG0780036908.01.T01 AT5G03100 24.611 321 189 11 19 308 4 302 1.32e-15 77.8
MsG0780036908.01.T01 AT1G51370 24.939 409 263 15 18 399 13 404 1.38e-15 79.0
MsG0780036908.01.T01 AT1G05080 26.603 421 241 15 23 399 12 408 1.59e-15 78.6
MsG0780036908.01.T01 AT1G06630 28.000 350 206 14 23 337 11 349 1.68e-15 79.0
MsG0780036908.01.T01 AT3G42770 24.074 432 257 19 26 413 1 405 1.71e-15 79.0
MsG0780036908.01.T01 AT5G41830 25.132 378 224 16 16 341 4 374 1.95e-15 78.6
MsG0780036908.01.T01 AT5G44960 25.191 393 261 12 24 397 5 383 2.16e-15 78.2
MsG0780036908.01.T01 AT3G58940 25.346 434 253 18 24 409 2 412 2.52e-15 78.6
MsG0780036908.01.T01 AT3G58940 25.346 434 253 18 24 409 2 412 2.52e-15 78.6
MsG0780036908.01.T01 AT5G25860 23.185 427 259 15 22 399 10 416 2.54e-15 78.2
MsG0780036908.01.T01 AT3G03030 24.658 438 256 18 24 399 2 427 3.57e-15 77.8
MsG0780036908.01.T01 AT5G22670 23.002 413 266 12 22 396 9 407 4.37e-15 77.4
MsG0780036908.01.T01 AT3G44060 24.010 404 261 14 29 399 4 394 5.28e-15 77.0
MsG0780036908.01.T01 AT1G21990 23.529 442 271 14 22 408 7 436 6.06e-15 77.0
MsG0780036908.01.T01 AT1G78730 23.544 412 224 12 24 379 22 398 6.78e-15 76.6
MsG0780036908.01.T01 AT3G58960 25.691 362 207 16 24 337 2 349 6.96e-15 77.0
MsG0780036908.01.T01 AT3G58980 25.116 430 251 18 24 399 2 414 8.22e-15 77.0
MsG0780036908.01.T01 AT1G78760 23.503 451 277 17 15 425 7 429 8.48e-15 76.6
MsG0780036908.01.T01 AT1G13570 24.658 438 274 18 19 426 1 412 8.82e-15 76.3
MsG0780036908.01.T01 AT1G13570 24.658 438 274 18 19 426 1 412 8.82e-15 76.3
MsG0780036908.01.T01 AT3G51530 26.392 413 238 16 22 396 28 412 9.13e-15 76.3
MsG0780036908.01.T01 AT5G22700 24.641 418 256 14 14 392 33 430 1.05e-14 76.3
MsG0780036908.01.T01 AT5G62970 23.005 426 259 14 24 395 2 412 1.11e-14 76.3
MsG0780036908.01.T01 AT2G29910 25.000 340 192 11 23 312 28 354 2.77e-14 74.3
MsG0780036908.01.T01 AT3G44810 27.451 357 199 14 26 337 9 350 2.85e-14 74.7
MsG0780036908.01.T01 AT2G29910 25.000 340 192 11 23 312 4 330 2.97e-14 74.3
MsG0780036908.01.T01 AT2G29910 25.000 340 192 11 23 312 4 330 2.97e-14 74.3
MsG0780036908.01.T01 AT2G29910 25.000 340 192 11 23 312 4 330 2.97e-14 74.3
MsG0780036908.01.T01 AT2G29910 25.000 340 192 11 23 312 4 330 2.97e-14 74.3
MsG0780036908.01.T01 AT5G44980 25.113 442 284 18 23 428 3 433 3.31e-14 74.7
MsG0780036908.01.T01 AT5G44980 25.113 442 284 18 23 428 3 433 3.31e-14 74.7
MsG0780036908.01.T01 AT3G49020 24.528 424 276 14 23 419 21 427 3.36e-14 74.7
MsG0780036908.01.T01 AT5G38396 24.138 435 257 19 24 399 2 422 3.72e-14 74.7
MsG0780036908.01.T01 AT5G22700 25.575 391 245 13 14 392 33 389 3.94e-14 74.3
MsG0780036908.01.T01 AT5G56810 25.000 400 264 14 24 399 15 402 4.79e-14 73.9
MsG0780036908.01.T01 AT5G56410 23.274 391 243 13 24 369 2 380 5.27e-14 74.3
MsG0780036908.01.T01 AT5G38390 25.967 362 208 16 24 341 2 347 6.04e-14 73.9
MsG0780036908.01.T01 AT3G58930 23.026 456 271 16 24 411 2 445 6.16e-14 73.9
MsG0780036908.01.T01 AT3G58930 23.026 456 271 16 24 411 2 445 6.16e-14 73.9
MsG0780036908.01.T01 AT3G58930 23.026 456 271 16 24 411 2 445 6.16e-14 73.9
MsG0780036908.01.T01 AT3G62430 27.348 362 199 16 24 341 2 343 6.16e-14 73.9
MsG0780036908.01.T01 AT2G29930 24.771 436 246 18 22 399 10 421 6.21e-14 73.9
MsG0780036908.01.T01 AT2G29930 24.771 436 246 18 22 399 10 421 6.21e-14 73.9
MsG0780036908.01.T01 AT3G58920 25.107 466 255 22 24 409 2 453 6.58e-14 73.9
MsG0780036908.01.T01 AT3G49030 26.512 215 144 4 23 230 20 227 7.47e-14 73.6
MsG0780036908.01.T01 AT5G22700 24.939 413 251 14 19 392 1 393 8.14e-14 73.6
MsG0780036908.01.T01 AT5G22700 24.939 413 251 14 19 392 1 393 8.14e-14 73.6
MsG0780036908.01.T01 AT5G22700 24.939 413 251 14 19 392 1 393 8.14e-14 73.6
MsG0780036908.01.T01 AT5G22700 24.939 413 251 14 19 392 1 393 8.14e-14 73.6
MsG0780036908.01.T01 AT5G22610 27.979 193 125 4 23 206 17 204 8.36e-14 73.6
MsG0780036908.01.T01 AT5G56370 26.420 352 199 12 24 346 2 322 1.08e-13 72.0
MsG0780036908.01.T01 AT1G06630 30.638 235 142 10 23 242 11 239 1.19e-13 71.6
MsG0780036908.01.T01 AT5G18780 24.760 416 269 13 15 397 2 406 1.20e-13 72.8
MsG0780036908.01.T01 AT5G18780 24.760 416 269 13 15 397 2 406 1.20e-13 72.8
MsG0780036908.01.T01 AT2G29910 27.727 220 143 6 23 235 4 214 1.22e-13 72.0
MsG0780036908.01.T01 AT2G29910 27.727 220 143 6 23 235 4 214 1.22e-13 72.0
MsG0780036908.01.T01 AT5G44490 21.308 413 278 12 23 397 16 419 1.48e-13 72.8
MsG0780036908.01.T01 AT3G49030 26.512 215 144 4 23 230 20 227 1.54e-13 72.4
MsG0780036908.01.T01 AT5G22660 28.042 189 124 4 22 206 11 191 1.79e-13 71.2
MsG0780036908.01.T01 AT5G44490 21.308 413 278 12 23 397 16 419 1.96e-13 72.4
MsG0780036908.01.T01 AT3G49480 22.727 440 296 13 23 427 11 441 2.51e-13 72.0
MsG0780036908.01.T01 AT5G41630 26.166 386 211 16 18 341 6 379 2.74e-13 72.0
MsG0780036908.01.T01 AT3G03040 28.643 199 129 7 24 211 2 198 2.82e-13 72.0
MsG0780036908.01.T01 AT2G26030 22.912 419 262 16 24 397 4 406 4.20e-13 71.2
MsG0780036908.01.T01 AT2G26030 22.912 419 262 16 24 397 4 406 4.20e-13 71.2
MsG0780036908.01.T01 AT1G51370 25.513 341 216 12 18 337 13 336 4.43e-13 70.5
MsG0780036908.01.T01 AT1G51370 25.266 376 238 14 18 367 13 371 4.46e-13 70.9
MsG0780036908.01.T01 AT1G66320 21.296 432 286 13 4 397 9 424 4.67e-13 71.2
MsG0780036908.01.T01 AT4G26350 23.973 438 288 15 24 428 2 427 4.68e-13 70.9
MsG0780036908.01.T01 AT2G42720 24.217 351 229 10 24 341 2 348 4.95e-13 70.9
MsG0780036908.01.T01 AT3G03030 28.500 200 129 7 24 211 2 199 5.11e-13 70.1
MsG0780036908.01.T01 AT2G26030 22.749 422 264 16 24 397 4 411 5.33e-13 70.9
MsG0780036908.01.T01 AT4G13960 25.278 360 210 14 24 337 2 348 6.01e-13 70.9
MsG0780036908.01.T01 AT4G13960 25.278 360 210 14 24 337 2 348 6.01e-13 70.9
MsG0780036908.01.T01 AT3G49150 23.725 451 286 17 23 423 15 457 6.33e-13 70.9
MsG0780036908.01.T01 AT3G59150 28.242 347 197 13 12 317 4 339 6.46e-13 70.9
MsG0780036908.01.T01 AT3G49040 25.806 217 145 5 21 229 14 222 8.69e-13 69.3
MsG0780036908.01.T01 AT5G02910 24.793 363 224 15 21 351 8 353 5.55e-12 67.8
MsG0780036908.01.T01 AT4G10420 25.338 296 201 8 118 399 2 291 5.58e-12 67.0
MsG0780036908.01.T01 AT3G59000 26.244 442 261 17 24 409 2 434 6.77e-12 67.8
MsG0780036908.01.T01 AT5G38386 23.373 338 200 10 24 341 2 300 6.88e-12 67.4
MsG0780036908.01.T01 AT5G38386 23.373 338 200 10 24 341 2 300 6.88e-12 67.4
MsG0780036908.01.T01 AT5G02910 24.566 346 215 14 21 337 8 336 8.57e-12 66.6
MsG0780036908.01.T01 AT3G26930 22.676 441 290 15 22 428 19 442 1.18e-11 66.6
MsG0780036908.01.T01 AT5G02910 24.566 346 215 14 21 337 8 336 1.22e-11 66.2
MsG0780036908.01.T01 AT5G25850 28.191 188 121 6 24 207 20 197 1.78e-11 66.2
MsG0780036908.01.T01 AT5G18780 25.915 355 220 12 15 337 2 345 2.13e-11 65.5
MsG0780036908.01.T01 AT5G18780 25.915 355 220 12 15 337 2 345 2.13e-11 65.5
MsG0780036908.01.T01 AT5G18770 23.315 356 230 9 22 342 22 369 4.52e-11 65.1
MsG0780036908.01.T01 AT5G18770 23.229 353 228 9 22 339 22 366 5.67e-11 64.3
MsG0780036908.01.T01 AT5G56820 20.655 397 255 13 24 391 15 380 8.12e-11 63.9

Find 72 sgRNAs with CRISPR-Local

Find 97 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCACTTTGTTGCTAATA+TGG 0.137387 7:+16077293 None:intergenic
CAACAAAGTGGAGGTATTTA+TGG 0.189365 7:-16077284 MsG0780036908.01.T01:CDS
TATGATGCTGTGAACCTATT+AGG 0.248252 7:+16077012 None:intergenic
TGACCTTGGATAATTGTTAT+TGG 0.256208 7:-16076831 MsG0780036908.01.T01:CDS
AAATGTCATGAGACAGCTTT+TGG 0.259065 7:+16075836 None:intergenic
TCGCAATATGTATATTCTTT+AGG 0.264837 7:+16076803 None:intergenic
CTTTCAGATTAGGAGTCTTT+AGG 0.265615 7:+16076216 None:intergenic
TCGGTTGAACAACTCTTCTT+AGG 0.268515 7:-16076874 MsG0780036908.01.T01:CDS
TCCGTCATTAACTTTGAAAT+TGG 0.278759 7:-16077252 MsG0780036908.01.T01:CDS
TTTCCAGACAGACGTTATTC+AGG 0.303874 7:-16076584 MsG0780036908.01.T01:CDS
GTAGTTATGTGTTCCCTAAT+AGG 0.323723 7:-16077026 MsG0780036908.01.T01:CDS
TTTGAATCATATGAATTAAC+AGG 0.325715 7:+16077228 None:intergenic
AACTACCTTCTAGATGTTCT+AGG 0.338119 7:+16077043 None:intergenic
TTAAAACAAAATTAATAAAC+TGG 0.341240 7:+16075955 None:intergenic
ATTGAGCTATTGAGTGGATT+AGG 0.346030 7:-16076551 MsG0780036908.01.T01:CDS
ATATTGCGATTTCCACATTA+AGG 0.355961 7:-16076789 MsG0780036908.01.T01:CDS
AAATGAAGAGCTTTCAGATT+AGG 0.361355 7:+16076206 None:intergenic
ATCTATATTTGCATCAACTA+TGG 0.365242 7:+16076622 None:intergenic
GTTCGGACAACGTCTTTGAT+AGG 0.368180 7:+16077318 None:intergenic
ATGATGCTGTGAACCTATTA+GGG 0.376203 7:+16077013 None:intergenic
GTTGATGCAAATATAGATCT+TGG 0.379947 7:-16076617 MsG0780036908.01.T01:CDS
ATACCAATGGTTAGAATAGA+TGG 0.394814 7:+16076759 None:intergenic
GTAGTTTCAAAGGTTTACTT+TGG 0.402975 7:-16076907 MsG0780036908.01.T01:CDS
TGGGGACTACAGCTTCCAAC+TGG 0.434388 7:+16075856 None:intergenic
AAGGTCAACTCTTGTAGAAC+AGG 0.444137 7:+16076847 None:intergenic
TGACCTGAATAACGTCTGTC+TGG 0.452814 7:+16076581 None:intergenic
TTTGAAATGAAGGAAGATGA+TGG 0.458367 7:+16076300 None:intergenic
CGGTTGAACAACTCTTCTTA+GGG 0.461333 7:-16076873 MsG0780036908.01.T01:CDS
TTGTTGCTAATATGGATGTT+CGG 0.463017 7:+16077301 None:intergenic
ATGTTATGCAGAACATCATC+AGG 0.479045 7:+16077354 None:intergenic
GAAAACATTAGTAGTTTCAA+AGG 0.488514 7:-16076917 MsG0780036908.01.T01:CDS
ATTTGACACATCTGCTTCTG+AGG 0.489497 7:-16076277 MsG0780036908.01.T01:CDS
GAGCGATATATCAACTGATC+TGG 0.492452 7:-16075892 MsG0780036908.01.T01:CDS
TTGATGCAAATATAGATCTT+GGG 0.492937 7:-16076616 MsG0780036908.01.T01:CDS
CCTTGGATAATTGTTATTGG+AGG 0.496093 7:-16076828 MsG0780036908.01.T01:CDS
TTCAAAGGTTTACTTTGGAA+AGG 0.497034 7:-16076902 MsG0780036908.01.T01:CDS
TTTGCATCAACTATGGAGGT+TGG 0.498210 7:+16076629 None:intergenic
TGGTGCTTATGTAAGCCTGC+TGG 0.501719 7:+16077420 None:intergenic
TGACCATCTATTCTAACCAT+TGG 0.515469 7:-16076762 MsG0780036908.01.T01:intron
ATTTCCCTAGAACATCTAGA+AGG 0.518255 7:-16077048 MsG0780036908.01.T01:CDS
TATCGCTCGAACACACTATC+CGG 0.519961 7:+16075907 None:intergenic
CTATGGAGGTTGGTTTAACA+AGG 0.528010 7:+16076639 None:intergenic
ACCAATTTCAAAGTTAATGA+CGG 0.528224 7:+16077251 None:intergenic
GATGGTCAACTTCCTTAATG+TGG 0.534700 7:+16076777 None:intergenic
TCATGCATCTTGAAGACGAC+TGG 0.535989 7:-16076061 MsG0780036908.01.T01:CDS
TTCGGACAACGTCTTTGATA+GGG 0.540031 7:+16077319 None:intergenic
GGCATACTGTCATCTCCAGC+AGG 0.542190 7:-16077435 MsG0780036908.01.T01:CDS
GGCTAATATCAGAAGCCAGT+TGG 0.547917 7:-16075871 MsG0780036908.01.T01:CDS
TTTCGCTAGTGAAGTAGTAA+TGG 0.555642 7:-16076246 MsG0780036908.01.T01:CDS
ACTACCTTCTAGATGTTCTA+GGG 0.566820 7:+16077044 None:intergenic
CAAGGAGGTTCCGTCGGTGT+AGG 0.574104 7:-16077126 MsG0780036908.01.T01:CDS
TGTTCTACAAGAGTTGACCT+TGG 0.578378 7:-16076845 MsG0780036908.01.T01:CDS
TGCTTTGTATAGATCATGGG+AGG 0.583591 7:-16077456 None:intergenic
CTAGTGTCTTGAGTATTCAA+AGG 0.590326 7:-16076330 MsG0780036908.01.T01:intron
TATATTTGCATCAACTATGG+AGG 0.594179 7:+16076625 None:intergenic
CATCCATATTAGCAACAAAG+TGG 0.594991 7:-16077296 MsG0780036908.01.T01:CDS
TTCATATGATTCAAAGTCGG+CGG 0.596021 7:-16077220 MsG0780036908.01.T01:CDS
TAATTCATATGATTCAAAGT+CGG 0.608842 7:-16077223 MsG0780036908.01.T01:CDS
CCAGGAAAAGAAATACCGCT+AGG 0.615986 7:+16076943 None:intergenic
TTACTTTGGAAAGGAGAAGT+CGG 0.618141 7:-16076893 MsG0780036908.01.T01:CDS
CCTCCAATAACAATTATCCA+AGG 0.622190 7:+16076828 None:intergenic
GGATTACCTCTTAGATCAAG+TGG 0.627102 7:-16077199 MsG0780036908.01.T01:CDS
ACTAACTTTACCTACACCGA+CGG 0.630531 7:+16077116 None:intergenic
AAAGTTAATGACGGATACGT+CGG 0.635328 7:+16077260 None:intergenic
CCATATTAGCAACAAAGTGG+AGG 0.658941 7:-16077293 MsG0780036908.01.T01:CDS
TGTGCAATTGAGCTATTGAG+TGG 0.660065 7:-16076557 MsG0780036908.01.T01:CDS
AGAGAATATTCGAAACAACA+AGG 0.661429 7:+16076023 None:intergenic
AAAACACAAGGAGGTTCCGT+CGG 0.669972 7:-16077132 MsG0780036908.01.T01:CDS
CTAGGAATATATAGAGTGCG+AGG 0.679228 7:+16076961 None:intergenic
AGACTCTGCGTTAAAACACA+AGG 0.683392 7:-16077144 MsG0780036908.01.T01:CDS
CGCACTCTATATATTCCTAG+CGG 0.687107 7:-16076958 MsG0780036908.01.T01:CDS
CTCTGCGTTAAAACACAAGG+AGG 0.711635 7:-16077141 MsG0780036908.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTGAAAAATATGAAAA+TGG + Chr7:16076810-16076829 None:intergenic 10.0%
!! TTAAAACAAAATTAATAAAC+TGG + Chr7:16077319-16077338 None:intergenic 10.0%
!!! ATCAAGATTATAATATTTTT+TGG - Chr7:16076533-16076552 MsG0780036908.01.T01:CDS 10.0%
!!! GTTTATATTTATTTTTTTGT+AGG - Chr7:16077175-16077194 MsG0780036908.01.T01:CDS 10.0%
!! AATAAATATAAACAAGTCAA+TGG + Chr7:16077168-16077187 None:intergenic 15.0%
!! ATTGAAAAATATGAAAATGG+TGG + Chr7:16076807-16076826 None:intergenic 20.0%
!! TAATTCATATGATTCAAAGT+CGG - Chr7:16076048-16076067 MsG0780036908.01.T01:CDS 20.0%
!! TATTATAATCTTGATACCAA+TGG + Chr7:16076528-16076547 None:intergenic 20.0%
!! TTGAAAAATATGAAAATGGT+GGG + Chr7:16076806-16076825 None:intergenic 20.0%
!! TTTCAATATTGTCTTAGATT+CGG - Chr7:16076820-16076839 MsG0780036908.01.T01:CDS 20.0%
!! TTTGAATCATATGAATTAAC+AGG + Chr7:16076046-16076065 None:intergenic 20.0%
!!! CTATTATGTACTATGTTTTA+AGG - Chr7:16077120-16077139 MsG0780036908.01.T01:CDS 20.0%
! ACCAATTTCAAAGTTAATGA+CGG + Chr7:16076023-16076042 None:intergenic 25.0%
! ATCTATATTTGCATCAACTA+TGG + Chr7:16076652-16076671 None:intergenic 25.0%
! GAAAACATTAGTAGTTTCAA+AGG - Chr7:16076354-16076373 MsG0780036908.01.T01:intron 25.0%
! TCGCAATATGTATATTCTTT+AGG + Chr7:16076471-16076490 None:intergenic 25.0%
! TTGATGCAAATATAGATCTT+GGG - Chr7:16076655-16076674 MsG0780036908.01.T01:CDS 25.0%
!! CTTATCAGATAATTTTCTTC+GGG - Chr7:16076761-16076780 MsG0780036908.01.T01:intron 25.0%
!! GCTTATCAGATAATTTTCTT+CGG - Chr7:16076760-16076779 MsG0780036908.01.T01:intron 25.0%
!!! TGTGTCAAATTTTGAAATGA+AGG + Chr7:16076984-16077003 None:intergenic 25.0%
AAAAACATAATGTGGGTGAT+GGG - Chr7:16075873-16075892 MsG0780036908.01.T01:CDS 30.0%
AAATGAAGAGCTTTCAGATT+AGG + Chr7:16077068-16077087 None:intergenic 30.0%
AAGCACCAAAAACATAATGT+GGG - Chr7:16075866-16075885 MsG0780036908.01.T01:CDS 30.0%
ACAAGGAAAAATTCTACTTC+TGG + Chr7:16076618-16076637 None:intergenic 30.0%
AGAGAATATTCGAAACAACA+AGG + Chr7:16077251-16077270 None:intergenic 30.0%
ATACCAATGGTTAGAATAGA+TGG + Chr7:16076515-16076534 None:intergenic 30.0%
ATATTGCGATTTCCACATTA+AGG - Chr7:16076482-16076501 MsG0780036908.01.T01:intron 30.0%
GTAGTTTCAAAGGTTTACTT+TGG - Chr7:16076364-16076383 MsG0780036908.01.T01:intron 30.0%
GTTGATGCAAATATAGATCT+TGG - Chr7:16076654-16076673 MsG0780036908.01.T01:CDS 30.0%
TAAGCACCAAAAACATAATG+TGG - Chr7:16075865-16075884 MsG0780036908.01.T01:CDS 30.0%
TATATTTGCATCAACTATGG+AGG + Chr7:16076649-16076668 None:intergenic 30.0%
TGACCTTGGATAATTGTTAT+TGG - Chr7:16076440-16076459 MsG0780036908.01.T01:intron 30.0%
TTGTTGCTAATATGGATGTT+CGG + Chr7:16075973-16075992 None:intergenic 30.0%
! TTCAAAGGTTTACTTTGGAA+AGG - Chr7:16076369-16076388 MsG0780036908.01.T01:intron 30.0%
! TTTGAAATGAAGGAAGATGA+TGG + Chr7:16076974-16076993 None:intergenic 30.0%
!! TCCGTCATTAACTTTGAAAT+TGG - Chr7:16076019-16076038 MsG0780036908.01.T01:CDS 30.0%
AACTACCTTCTAGATGTTCT+AGG + Chr7:16076231-16076250 None:intergenic 35.0%
ACTACCTTCTAGATGTTCTA+GGG + Chr7:16076230-16076249 None:intergenic 35.0%
ATGATGCTGTGAACCTATTA+GGG + Chr7:16076261-16076280 None:intergenic 35.0%
ATGTTATGCAGAACATCATC+AGG + Chr7:16075920-16075939 None:intergenic 35.0%
ATTTCCCTAGAACATCTAGA+AGG - Chr7:16076223-16076242 MsG0780036908.01.T01:CDS 35.0%
CAAAAACATAATGTGGGTGA+TGG - Chr7:16075872-16075891 MsG0780036908.01.T01:CDS 35.0%
CATCCATATTAGCAACAAAG+TGG - Chr7:16075975-16075994 MsG0780036908.01.T01:CDS 35.0%
CCTCCAATAACAATTATCCA+AGG + Chr7:16076446-16076465 None:intergenic 35.0%
CTAGTGTCTTGAGTATTCAA+AGG - Chr7:16076941-16076960 MsG0780036908.01.T01:CDS 35.0%
CTTTCAGATTAGGAGTCTTT+AGG + Chr7:16077058-16077077 None:intergenic 35.0%
GTAGTTATGTGTTCCCTAAT+AGG - Chr7:16076245-16076264 MsG0780036908.01.T01:CDS 35.0%
TATGATGCTGTGAACCTATT+AGG + Chr7:16076262-16076281 None:intergenic 35.0%
TGACCATCTATTCTAACCAT+TGG - Chr7:16076509-16076528 MsG0780036908.01.T01:intron 35.0%
TTCATATGATTCAAAGTCGG+CGG - Chr7:16076051-16076070 MsG0780036908.01.T01:CDS 35.0%
TTTCGCTAGTGAAGTAGTAA+TGG - Chr7:16077025-16077044 MsG0780036908.01.T01:CDS 35.0%
! AAATGTCATGAGACAGCTTT+TGG + Chr7:16077438-16077457 None:intergenic 35.0%
! AATGTCATGAGACAGCTTTT+GGG + Chr7:16077437-16077456 None:intergenic 35.0%
! ACTACTAATGTTTTCAGACC+AGG + Chr7:16076349-16076368 None:intergenic 35.0%
! ATTGAGCTATTGAGTGGATT+AGG - Chr7:16076720-16076739 MsG0780036908.01.T01:intron 35.0%
! CATCACCCACATTATGTTTT+TGG + Chr7:16075874-16075893 None:intergenic 35.0%
! CCTTGGATAATTGTTATTGG+AGG - Chr7:16076443-16076462 MsG0780036908.01.T01:intron 35.0%
! TTACTTTGGAAAGGAGAAGT+CGG - Chr7:16076378-16076397 MsG0780036908.01.T01:intron 35.0%
! TTTTGCGTTTCAGATTTTCG+TGG - Chr7:16077278-16077297 MsG0780036908.01.T01:CDS 35.0%
! TTTTGTCCACTTGATCTAAG+AGG + Chr7:16076081-16076100 None:intergenic 35.0%
!! AAAGTTAATGACGGATACGT+CGG + Chr7:16076014-16076033 None:intergenic 35.0%
!! CAACAAAGTGGAGGTATTTA+TGG - Chr7:16075987-16076006 MsG0780036908.01.T01:CDS 35.0%
!! GAAAGCTCTTCATTTTGATG+CGG - Chr7:16077073-16077092 MsG0780036908.01.T01:CDS 35.0%
!!! CTAGAGTTTTAGAAGAGATC+CGG - Chr7:16077345-16077364 MsG0780036908.01.T01:CDS 35.0%
AAGGTCAACTCTTGTAGAAC+AGG + Chr7:16076427-16076446 None:intergenic 40.0%
ACTAACTTTACCTACACCGA+CGG + Chr7:16076158-16076177 None:intergenic 40.0%
AGACTCTGCGTTAAAACACA+AGG - Chr7:16076127-16076146 MsG0780036908.01.T01:intron 40.0%
ATTTGACACATCTGCTTCTG+AGG - Chr7:16076994-16077013 MsG0780036908.01.T01:CDS 40.0%
CCATATTAGCAACAAAGTGG+AGG - Chr7:16075978-16075997 MsG0780036908.01.T01:CDS 40.0%
CCTCCACTTTGTTGCTAATA+TGG + Chr7:16075981-16076000 None:intergenic 40.0%
CGCACTCTATATATTCCTAG+CGG - Chr7:16076313-16076332 MsG0780036908.01.T01:CDS 40.0%
CGGTTGAACAACTCTTCTTA+GGG - Chr7:16076398-16076417 MsG0780036908.01.T01:intron 40.0%
CTAGGAATATATAGAGTGCG+AGG + Chr7:16076313-16076332 None:intergenic 40.0%
GAGCGATATATCAACTGATC+TGG - Chr7:16077379-16077398 MsG0780036908.01.T01:CDS 40.0%
GATGGTCAACTTCCTTAATG+TGG + Chr7:16076497-16076516 None:intergenic 40.0%
GGATTACCTCTTAGATCAAG+TGG - Chr7:16076072-16076091 MsG0780036908.01.T01:CDS 40.0%
TCGGTTGAACAACTCTTCTT+AGG - Chr7:16076397-16076416 MsG0780036908.01.T01:intron 40.0%
TGTGCAATTGAGCTATTGAG+TGG - Chr7:16076714-16076733 MsG0780036908.01.T01:intron 40.0%
TGTTCTACAAGAGTTGACCT+TGG - Chr7:16076426-16076445 MsG0780036908.01.T01:intron 40.0%
TTCGGACAACGTCTTTGATA+GGG + Chr7:16075955-16075974 None:intergenic 40.0%
TTTCCAGACAGACGTTATTC+AGG - Chr7:16076687-16076706 MsG0780036908.01.T01:intron 40.0%
TTTGCATCAACTATGGAGGT+TGG + Chr7:16076645-16076664 None:intergenic 40.0%
! ATGTCATGAGACAGCTTTTG+GGG + Chr7:16077436-16077455 None:intergenic 40.0%
!! CTATGGAGGTTGGTTTAACA+AGG + Chr7:16076635-16076654 None:intergenic 40.0%
AAAACACAAGGAGGTTCCGT+CGG - Chr7:16076139-16076158 MsG0780036908.01.T01:intron 45.0%
CCAGGAAAAGAAATACCGCT+AGG + Chr7:16076331-16076350 None:intergenic 45.0%
CTCTGCGTTAAAACACAAGG+AGG - Chr7:16076130-16076149 MsG0780036908.01.T01:intron 45.0%
GGCTAATATCAGAAGCCAGT+TGG - Chr7:16077400-16077419 MsG0780036908.01.T01:CDS 45.0%
GTTCGGACAACGTCTTTGAT+AGG + Chr7:16075956-16075975 None:intergenic 45.0%
TATCGCTCGAACACACTATC+CGG + Chr7:16077367-16077386 None:intergenic 45.0%
TCATGCATCTTGAAGACGAC+TGG - Chr7:16077210-16077229 MsG0780036908.01.T01:CDS 45.0%
TGACCTGAATAACGTCTGTC+TGG + Chr7:16076693-16076712 None:intergenic 45.0%
! CCTAGCGGTATTTCTTTTCC+TGG - Chr7:16076328-16076347 MsG0780036908.01.T01:CDS 45.0%
TGGTGCTTATGTAAGCCTGC+TGG + Chr7:16075854-16075873 None:intergenic 50.0%
GGCATACTGTCATCTCCAGC+AGG - Chr7:16075836-16075855 MsG0780036908.01.T01:CDS 55.0%
TGGGGACTACAGCTTCCAAC+TGG + Chr7:16077418-16077437 None:intergenic 55.0%
CAAGGAGGTTCCGTCGGTGT+AGG - Chr7:16076145-16076164 MsG0780036908.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 16075830 16077463 16075830 ID=MsG0780036908.01;Name=MsG0780036908.01
Chr7 mRNA 16075830 16077463 16075830 ID=MsG0780036908.01.T01;Parent=MsG0780036908.01;Name=MsG0780036908.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|1|0.75|4|0|429
Chr7 exon 16076763 16077463 16076763 ID=MsG0780036908.01.T01:exon:11289;Parent=MsG0780036908.01.T01
Chr7 exon 16076511 16076682 16076511 ID=MsG0780036908.01.T01:exon:11288;Parent=MsG0780036908.01.T01
Chr7 exon 16076199 16076348 16076199 ID=MsG0780036908.01.T01:exon:11287;Parent=MsG0780036908.01.T01
Chr7 exon 16075830 16076096 16075830 ID=MsG0780036908.01.T01:exon:11286;Parent=MsG0780036908.01.T01
Chr7 CDS 16076763 16077463 16076763 ID=MsG0780036908.01.T01:cds;Parent=MsG0780036908.01.T01
Chr7 CDS 16076511 16076682 16076511 ID=MsG0780036908.01.T01:cds;Parent=MsG0780036908.01.T01
Chr7 CDS 16076199 16076348 16076199 ID=MsG0780036908.01.T01:cds;Parent=MsG0780036908.01.T01
Chr7 CDS 16075830 16076096 16075830 ID=MsG0780036908.01.T01:cds;Parent=MsG0780036908.01.T01
Gene Sequence

>MsG0780036908.01.T01

ATGGGAGGCATACTGTCATCTCCAGCAGGCTTACATAAGCACCAAAAACATAATGTGGGTGATGGGAAAGATATGATCAACAATTTACCTGATGATGTTCTGCATAACATTCTTTCTTTTCTCCCTATCAAAGACGTTGTCCGAACATCCATATTAGCAACAAAGTGGAGGTATTTATGGACCGACGTATCCGTCATTAACTTTGAAATTGGTCCTGTTAATTCATATGATTCAAAGTCGGCGGATTACCTCTTAGATCAAGTGGACAAAATACTTCACAAATCTAATTGCGTAGTAAGACTCTGCGTTAAAACACAAGGAGGTTCCGTCGGTGTAGGTAAAGTTAGTACTTTTATATCTTCTGTTGTGAAGCACAAAGTACAAGATCTTACAATTTCCCTAGAACATCTAGAAGGTAGTTATGTGTTCCCTAATAGGTTCACAGCATCATATACATTAAGCAAGCTGCATTTAGAATTTCCTCGCACTCTATATATTCCTAGCGGTATTTCTTTTCCTGGTCTGAAAACATTAGTAGTTTCAAAGGTTTACTTTGGAAAGGAGAAGTCGGTTGAACAACTCTTCTTAGGGTGTCCTGTTCTACAAGAGTTGACCTTGGATAATTGTTATTGGAGGAACCTAAAGAATATACATATTGCGATTTCCACATTAAGGAAGTTGACCATCTATTCTAACCATTGCAATCCAGAAGTAGAATTTTTCCTTGTTAAACCAACCTCCATAGTTGATGCAAATATAGATCTTGGGTGTTACTATTTTCCAGACAGACGTTATTCAGGTCAATGTGCAATTGAGCTATTGAGTGGATTAGGTAGCGTAAAGTCTCTCAGCTTATCAGATAATTTTCTTCGGTGTCTTGAGTATTCAAAGGATACTCTCCATCATCTTCCTTCATTTCAAAATTTGACACATCTGCTTCTGAGGACTAACACTTTCGCTAGTGAAGTAGTAATGGACATTCTCCTAAAGACTCCTAATCTGAAAGCTCTTCATTTTGATGCGGAATCTGAGTCATTCATGCATCTTGAAGACGACTGGACATTACTTTCAGTGCCTTGTTGTTTCGAATATTCTCTCAAATCATTTTGCGTTTCAGATTTTCGTGGACTTGAACAACATATCCAGTTTATTAATTTTGTTTTAAAAAATGCTAGAGTTTTAGAAGAGATCCGGATAGTGTGTTCGAGCGATATATCAACTGATCTGGCTAATATCAGAAGCCAGTTGGAAGCTGTAGTCCCCAAAAGCTGTCTCATGACATTTCTGTAG
Protein sequence

>MsG0780036908.01.T01

MGGILSSPAGLHKHQKHNVGDGKDMINNLPDDVLHNILSFLPIKDVVRTSILATKWRYLWTDVSVINFEIGPVNSYDSKSADYLLDQVDKILHKSNCVVRLCVKTQGGSVGVGKVSTFISSVVKHKVQDLTISLEHLEGSYVFPNRFTASYTLSKLHLEFPRTLYIPSGISFPGLKTLVVSKVYFGKEKSVEQLFLGCPVLQELTLDNCYWRNLKNIHIAISTLRKLTIYSNHCNPEVEFFLVKPTSIVDANIDLGCYYFPDRRYSGQCAIELLSGLGSVKSLSLSDNFLRCLEYSKDTLHHLPSFQNLTHLLLRTNTFASEVVMDILLKTPNLKALHFDAESESFMHLEDDWTLLSVPCCFEYSLKSFCVSDFRGLEQHIQFINFVLKNARVLEEIRIVCSSDISTDLANIRSQLEAVVPKSCLMTFL*