AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022009.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022009.01.T01 MTR_4g080590 94.956 456 22 1 1 455 1 456 0.0 874
MsG0480022009.01.T01 MTR_4g080590 94.751 362 18 1 1 361 1 362 0.0 689
MsG0480022009.01.T01 MTR_4g080787 46.429 476 226 8 1 455 1 468 2.02e-123 368
MsG0480022009.01.T01 MTR_3g048290 47.021 470 233 6 1 455 1 469 5.55e-123 367
MsG0480022009.01.T01 MTR_4g130200 46.903 452 171 7 1 447 1 388 1.84e-116 347
MsG0480022009.01.T01 MTR_4g080773 44.989 469 232 8 1 448 1 464 2.95e-113 342
MsG0480022009.01.T01 MTR_4g080773 44.989 469 232 8 1 448 1 464 3.89e-113 342
MsG0480022009.01.T01 MTR_5g039950 44.444 459 208 6 1 451 1 420 3.95e-108 327
MsG0480022009.01.T01 MTR_7g023310 45.690 464 228 12 1 449 1 455 1.32e-105 321
MsG0480022009.01.T01 MTR_5g039970 54.489 323 139 4 5 319 1 323 9.13e-100 302
MsG0480022009.01.T01 MTR_7g023330 41.266 458 193 12 6 451 3 396 1.72e-87 273
MsG0480022009.01.T01 MTR_7g039630 43.514 370 166 6 1 359 1 338 5.90e-78 246
MsG0480022009.01.T01 MTR_4g080807 42.179 358 167 5 90 442 1 323 9.90e-71 230
MsG0480022009.01.T01 MTR_2g094750 43.280 372 174 13 21 357 88 457 1.91e-63 213
MsG0480022009.01.T01 MTR_4g081030 37.534 373 205 9 13 370 7 366 3.61e-53 183
MsG0480022009.01.T01 MTR_5g005690 27.983 461 269 12 9 418 3 451 3.95e-33 131
MsG0480022009.01.T01 MTR_5g080710 28.471 425 273 15 6 419 17 421 1.28e-25 109
MsG0480022009.01.T01 MTR_2g072530 25.688 436 309 11 15 441 5 434 3.07e-25 108
MsG0480022009.01.T01 MTR_4g045900 24.494 494 290 18 23 445 26 507 7.74e-23 101
MsG0480022009.01.T01 MTR_5g084070 26.799 403 269 10 23 419 13 395 1.07e-22 100
MsG0480022009.01.T01 MTR_4g080813 59.722 72 29 0 5 76 1 72 1.62e-22 92.0
MsG0480022009.01.T01 MTR_8g467800 28.440 436 258 18 14 418 11 423 9.35e-22 97.8
MsG0480022009.01.T01 MTR_1g082260 40.278 144 83 1 73 213 23 166 3.97e-21 90.9
MsG0480022009.01.T01 MTR_2g007450 24.885 434 233 14 23 419 16 393 3.94e-19 89.7
MsG0480022009.01.T01 MTR_7g094030 26.292 445 263 17 12 420 19 434 6.92e-18 86.3
MsG0480022009.01.T01 MTR_4g032845 25.556 450 280 15 21 438 1 427 7.34e-18 85.9
MsG0480022009.01.T01 MTR_8g062270 27.740 447 274 18 20 434 13 442 9.26e-18 85.9
MsG0480022009.01.T01 MTR_2g082850 25.770 357 228 12 22 355 21 363 3.49e-17 83.2
MsG0480022009.01.T01 MTR_1g090883 27.273 363 229 12 15 359 11 356 6.42e-17 82.4
MsG0480022009.01.T01 MTR_2g082800 25.935 428 264 18 9 415 15 410 1.12e-16 82.0
MsG0480022009.01.T01 MTR_0049s0110 25.837 418 259 16 23 423 8 391 1.46e-16 82.0
MsG0480022009.01.T01 MTR_2g007500 26.562 384 206 15 23 395 14 332 1.52e-16 80.9
MsG0480022009.01.T01 MTR_7g088260 26.157 432 225 19 17 429 85 441 2.85e-16 81.3
MsG0480022009.01.T01 MTR_7g026500 25.112 446 221 16 23 434 14 380 3.72e-16 80.5
MsG0480022009.01.T01 MTR_3g448340 25.688 436 269 18 23 418 6 426 4.76e-16 80.5
MsG0480022009.01.T01 MTR_3g026920 25.000 420 238 15 21 418 17 381 5.47e-16 80.1
MsG0480022009.01.T01 MTR_3g108150 25.176 425 230 16 22 429 12 365 1.11e-15 79.0
MsG0480022009.01.T01 MTR_7g075820 24.356 427 230 16 22 419 5 367 2.16e-15 78.2
MsG0480022009.01.T01 MTR_5g083890 23.266 447 244 14 22 432 5 388 2.50e-14 75.5
MsG0480022009.01.T01 MTR_8g467800 29.603 277 169 12 14 275 11 276 3.15e-14 73.9
MsG0480022009.01.T01 MTR_2g091145 25.058 431 255 16 23 423 21 413 3.67e-14 74.7
MsG0480022009.01.T01 MTR_5g073420 22.951 427 246 13 23 438 11 365 5.95e-14 73.6
MsG0480022009.01.T01 MTR_0049s0110 30.435 207 133 7 23 224 8 208 6.21e-14 72.4
MsG0480022009.01.T01 MTR_6g018660 24.444 360 215 12 12 338 9 344 1.03e-13 72.8
MsG0480022009.01.T01 MTR_2g072720 24.236 458 303 16 11 444 31 468 1.11e-13 73.2
MsG0480022009.01.T01 MTR_8g058965 26.697 442 267 18 14 419 4 424 1.18e-13 73.2
MsG0480022009.01.T01 MTR_3g108560 23.364 428 239 17 17 429 14 367 1.51e-13 72.4
MsG0480022009.01.T01 MTR_0049s0110 30.435 207 133 7 23 224 8 208 2.14e-13 71.6
MsG0480022009.01.T01 MTR_7g055943 25.566 442 244 18 4 426 21 396 2.16e-13 72.0
MsG0480022009.01.T01 MTR_3g107160 31.373 204 103 7 20 202 7 194 2.19e-13 72.0
MsG0480022009.01.T01 MTR_0049s0110 30.435 207 133 7 23 224 8 208 2.40e-13 71.2
MsG0480022009.01.T01 MTR_1g038710 25.522 431 266 18 23 419 19 428 2.45e-13 72.0
MsG0480022009.01.T01 MTR_8g468840 25.293 427 272 18 21 418 12 420 2.87e-13 72.0
MsG0480022009.01.T01 MTR_7g056433 24.884 430 232 16 20 429 9 367 4.38e-13 70.9
MsG0480022009.01.T01 MTR_1g038760 25.895 363 233 12 14 359 6 349 4.79e-13 70.5
MsG0480022009.01.T01 MTR_5g038430 30.631 222 140 9 14 226 87 303 5.68e-13 71.2
MsG0480022009.01.T01 MTR_1g013630 29.592 196 123 7 23 206 39 231 6.57e-13 70.5
MsG0480022009.01.T01 MTR_3g023330 26.431 367 227 13 12 352 2 351 1.02e-12 69.7
MsG0480022009.01.T01 MTR_0227s0010 30.542 203 124 8 14 205 6 202 1.07e-12 69.3
MsG0480022009.01.T01 MTR_8g066650 27.744 328 220 9 16 335 73 391 1.21e-12 70.1
MsG0480022009.01.T01 MTR_4g032730 22.785 474 306 17 14 443 4 461 1.40e-12 69.7
MsG0480022009.01.T01 MTR_3g107100 24.450 409 239 14 20 418 8 356 2.29e-12 68.9
MsG0480022009.01.T01 MTR_1g038760 25.301 332 219 9 14 335 6 318 2.47e-12 68.6
MsG0480022009.01.T01 MTR_1g011410 28.054 221 115 6 18 226 2 190 2.96e-12 69.3
MsG0480022009.01.T01 MTR_2g047848 24.940 417 260 15 23 416 7 393 3.89e-12 68.2
MsG0480022009.01.T01 MTR_2g072730 23.991 446 284 17 1 417 1 420 3.94e-12 68.6
MsG0480022009.01.T01 MTR_1g011430 27.876 226 151 6 23 239 7 229 8.14e-12 67.0
MsG0480022009.01.T01 MTR_6g088700 27.356 329 215 12 22 338 13 329 8.40e-12 67.0
MsG0480022009.01.T01 MTR_1g021825 28.378 222 124 8 23 226 17 221 1.07e-11 67.0
MsG0480022009.01.T01 MTR_2g094450 36.571 175 79 9 195 357 31 185 1.26e-11 64.3
MsG0480022009.01.T01 MTR_1g021825 28.378 222 124 8 23 226 88 292 1.28e-11 67.0
MsG0480022009.01.T01 MTR_3g109982 23.690 477 260 17 22 429 12 453 1.79e-11 67.0
MsG0480022009.01.T01 MTR_2g082880 23.877 423 274 15 20 420 7 403 2.48e-11 65.9
MsG0480022009.01.T01 MTR_1g021820 30.263 228 132 10 23 232 28 246 2.48e-11 65.9
MsG0480022009.01.T01 MTR_2g082780 26.601 203 138 8 26 221 15 213 2.77e-11 63.5
MsG0480022009.01.T01 MTR_8g017280 27.053 207 124 6 22 208 35 234 2.83e-11 64.7
MsG0480022009.01.T01 MTR_1g014450 27.876 226 145 9 23 234 16 237 5.87e-11 64.7
MsG0480022009.01.T01 MTR_8g017280 27.053 207 124 6 22 208 35 234 6.20e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022009.01.T01 AT3G58880 29.425 435 254 17 21 419 1 418 3.86e-30 122
MsG0480022009.01.T01 AT4G14096 27.887 459 285 16 22 450 7 449 3.91e-30 122
MsG0480022009.01.T01 AT4G14096 27.887 459 285 16 22 450 7 449 3.91e-30 122
MsG0480022009.01.T01 AT3G58860 28.603 451 288 15 23 451 7 445 7.15e-30 121
MsG0480022009.01.T01 AT3G59210 29.590 463 264 17 22 441 6 449 1.04e-28 118
MsG0480022009.01.T01 AT3G59210 29.590 463 264 17 22 441 6 449 1.04e-28 118
MsG0480022009.01.T01 AT3G59210 29.590 463 264 17 22 441 6 449 1.04e-28 118
MsG0480022009.01.T01 AT3G59210 29.590 463 264 17 22 441 6 449 1.04e-28 118
MsG0480022009.01.T01 AT3G59210 29.590 463 264 17 22 441 6 449 1.04e-28 118
MsG0480022009.01.T01 AT3G58900 28.935 432 263 14 23 419 2 424 1.01e-26 112
MsG0480022009.01.T01 AT5G53840 27.674 430 289 13 19 441 14 428 1.40e-26 112
MsG0480022009.01.T01 AT4G13965 26.728 434 283 14 23 446 10 418 5.99e-26 109
MsG0480022009.01.T01 AT4G14103 28.571 357 231 11 22 361 7 356 6.85e-26 108
MsG0480022009.01.T01 AT4G14103 28.571 357 231 11 22 361 7 356 6.85e-26 108
MsG0480022009.01.T01 AT1G78840 29.454 421 252 16 22 418 4 403 8.50e-26 109
MsG0480022009.01.T01 AT1G78840 29.454 421 252 16 22 418 4 403 8.50e-26 109
MsG0480022009.01.T01 AT4G14103 26.444 450 278 16 22 450 7 424 3.17e-25 107
MsG0480022009.01.T01 AT1G32375 27.098 417 255 15 23 418 2 390 2.13e-24 105
MsG0480022009.01.T01 AT1G32375 27.098 417 255 15 23 418 2 390 2.13e-24 105
MsG0480022009.01.T01 AT4G22280 28.507 442 273 16 23 451 2 413 3.04e-24 104
MsG0480022009.01.T01 AT3G59230 26.955 486 281 21 14 446 4 468 3.05e-24 105
MsG0480022009.01.T01 AT1G55030 24.757 412 269 12 16 414 12 395 5.78e-24 103
MsG0480022009.01.T01 AT1G55030 24.757 412 269 12 16 414 2 385 6.17e-24 103
MsG0480022009.01.T01 AT3G03030 26.897 435 280 13 23 423 2 432 1.28e-23 103
MsG0480022009.01.T01 AT1G51370 27.918 437 255 18 17 429 13 413 1.36e-23 103
MsG0480022009.01.T01 AT5G56420 25.287 435 293 13 22 446 5 417 1.73e-23 102
MsG0480022009.01.T01 AT5G56420 25.287 435 293 13 22 446 5 417 1.73e-23 102
MsG0480022009.01.T01 AT5G56420 25.287 435 293 13 22 446 5 417 1.73e-23 102
MsG0480022009.01.T01 AT5G25860 27.059 425 263 13 22 418 11 416 2.62e-23 102
MsG0480022009.01.T01 AT3G59200 25.840 476 263 19 22 434 6 454 3.33e-23 102
MsG0480022009.01.T01 AT5G44950 25.776 419 273 12 22 418 3 405 3.52e-23 102
MsG0480022009.01.T01 AT3G59240 26.351 444 286 15 22 433 7 441 1.43e-22 100
MsG0480022009.01.T01 AT4G22280 30.857 350 208 12 23 359 2 330 1.54e-22 98.6
MsG0480022009.01.T01 AT2G42730 26.353 425 279 13 20 418 2 418 1.63e-22 100
MsG0480022009.01.T01 AT5G38590 25.571 438 283 13 23 446 2 410 2.94e-22 99.0
MsG0480022009.01.T01 AT1G66290 25.653 421 288 13 19 428 25 431 3.77e-22 99.0
MsG0480022009.01.T01 AT3G50710 25.843 445 281 16 23 445 2 419 6.52e-22 98.2
MsG0480022009.01.T01 AT1G66300 24.941 425 290 14 23 433 29 438 1.32e-21 97.4
MsG0480022009.01.T01 AT3G59170 28.982 452 252 18 22 419 6 442 1.54e-21 97.4
MsG0480022009.01.T01 AT1G13780 25.000 464 295 17 23 451 10 455 1.72e-21 97.1
MsG0480022009.01.T01 AT1G58310 28.238 386 227 13 17 361 2 378 1.83e-21 97.4
MsG0480022009.01.T01 AT3G28410 26.888 331 201 14 12 328 19 322 2.35e-21 96.7
MsG0480022009.01.T01 AT5G53635 28.193 415 266 14 24 418 1 403 2.75e-21 96.3
MsG0480022009.01.T01 AT4G10400 26.256 438 280 14 23 449 2 407 2.85e-21 95.9
MsG0480022009.01.T01 AT4G10400 26.256 438 280 14 23 449 2 407 2.85e-21 95.9
MsG0480022009.01.T01 AT4G10400 26.256 438 280 14 23 449 2 407 2.85e-21 95.9
MsG0480022009.01.T01 AT3G59250 27.952 415 249 14 22 419 6 387 4.08e-21 95.5
MsG0480022009.01.T01 AT3G26922 28.030 264 179 6 15 273 6 263 6.16e-21 93.6
MsG0480022009.01.T01 AT3G26922 28.030 264 179 6 15 273 6 263 6.16e-21 93.6
MsG0480022009.01.T01 AT1G16930 24.703 421 280 13 23 418 15 423 7.15e-21 95.1
MsG0480022009.01.T01 AT1G16930 24.703 421 280 13 23 418 15 423 7.15e-21 95.1
MsG0480022009.01.T01 AT1G16930 24.703 421 280 13 23 418 15 423 7.15e-21 95.1
MsG0480022009.01.T01 AT3G03040 26.437 435 269 15 23 419 2 423 9.86e-21 95.1
MsG0480022009.01.T01 AT5G56380 26.244 442 288 16 23 443 2 426 4.02e-20 92.8
MsG0480022009.01.T01 AT5G56380 26.244 442 288 16 23 443 2 426 4.02e-20 92.8
MsG0480022009.01.T01 AT1G06630 28.249 354 225 12 22 359 11 351 4.77e-20 91.7
MsG0480022009.01.T01 AT1G06630 28.249 354 225 12 22 359 11 351 4.77e-20 91.7
MsG0480022009.01.T01 AT5G56440 26.392 413 270 10 23 418 2 397 5.58e-20 92.4
MsG0480022009.01.T01 AT4G00315 31.667 240 144 8 23 252 2 231 8.21e-20 92.0
MsG0480022009.01.T01 AT3G58980 26.862 443 273 17 23 431 2 427 9.34e-20 92.4
MsG0480022009.01.T01 AT5G22720 27.021 433 254 16 22 416 22 430 1.04e-19 91.7
MsG0480022009.01.T01 AT3G58930 25.056 443 276 15 23 419 2 434 1.04e-19 92.0
MsG0480022009.01.T01 AT3G58930 25.056 443 276 15 23 419 2 434 1.04e-19 92.0
MsG0480022009.01.T01 AT3G58930 25.056 443 276 15 23 419 2 434 1.04e-19 92.0
MsG0480022009.01.T01 AT3G49030 24.831 443 285 19 22 445 20 433 1.07e-19 91.7
MsG0480022009.01.T01 AT1G06630 28.249 354 225 12 22 359 11 351 1.24e-19 90.9
MsG0480022009.01.T01 AT1G06630 28.249 354 225 12 22 359 11 351 1.24e-19 90.9
MsG0480022009.01.T01 AT1G06630 28.249 354 225 12 22 359 11 351 1.24e-19 90.9
MsG0480022009.01.T01 AT1G06630 28.249 354 225 12 22 359 11 351 1.24e-19 90.9
MsG0480022009.01.T01 AT3G59000 26.256 438 268 15 23 419 2 425 1.29e-19 91.7
MsG0480022009.01.T01 AT1G51370 31.111 225 119 7 17 226 13 216 1.48e-19 90.1
MsG0480022009.01.T01 AT5G02700 26.911 327 207 13 11 328 17 320 1.49e-19 91.3
MsG0480022009.01.T01 AT1G51370 31.111 225 119 7 17 226 13 216 2.03e-19 90.5
MsG0480022009.01.T01 AT4G00160 25.959 443 286 14 22 445 15 434 2.17e-19 90.9
MsG0480022009.01.T01 AT5G41840 29.275 386 223 15 18 361 9 386 2.20e-19 91.3
MsG0480022009.01.T01 AT3G44060 24.424 434 306 11 28 451 4 425 2.20e-19 90.5
MsG0480022009.01.T01 AT1G06630 28.249 354 225 12 22 359 20 360 2.24e-19 90.5
MsG0480022009.01.T01 AT1G06630 28.249 354 225 12 22 359 11 351 2.63e-19 90.5
MsG0480022009.01.T01 AT2G29930 27.460 437 266 21 14 418 4 421 3.48e-19 90.1
MsG0480022009.01.T01 AT2G29930 27.460 437 266 21 14 418 4 421 3.48e-19 90.1
MsG0480022009.01.T01 AT3G59160 27.692 390 224 12 22 361 12 393 3.84e-19 90.1
MsG0480022009.01.T01 AT1G78750 24.888 446 312 14 23 450 18 458 4.51e-19 89.7
MsG0480022009.01.T01 AT1G78750 24.888 446 312 14 23 450 18 458 4.51e-19 89.7
MsG0480022009.01.T01 AT5G38590 31.754 211 134 5 23 228 2 207 5.53e-19 87.4
MsG0480022009.01.T01 AT5G56400 24.887 442 298 10 23 451 33 453 5.84e-19 89.4
MsG0480022009.01.T01 AT3G58960 26.106 452 263 18 23 419 2 437 1.01e-18 89.0
MsG0480022009.01.T01 AT5G56810 24.449 454 298 14 15 450 5 431 1.10e-18 88.6
MsG0480022009.01.T01 AT3G52680 26.606 436 279 15 22 441 20 430 1.21e-18 88.6
MsG0480022009.01.T01 AT4G10420 27.273 297 176 11 135 418 22 291 3.26e-18 85.9
MsG0480022009.01.T01 AT1G66320 25.172 437 291 16 17 434 23 442 3.34e-18 87.0
MsG0480022009.01.T01 AT5G22730 23.855 415 287 10 22 416 27 432 4.78e-18 86.7
MsG0480022009.01.T01 AT5G22730 23.855 415 287 10 22 416 27 432 4.78e-18 86.7
MsG0480022009.01.T01 AT1G55660 26.573 429 272 15 18 419 48 460 5.16e-18 86.7
MsG0480022009.01.T01 AT5G02930 26.197 355 228 14 23 360 28 365 6.96e-18 86.3
MsG0480022009.01.T01 AT3G59190 26.781 407 251 15 22 399 11 399 1.08e-17 85.9
MsG0480022009.01.T01 AT4G13960 25.701 428 274 13 23 419 2 416 1.10e-17 85.5
MsG0480022009.01.T01 AT4G13960 25.701 428 274 13 23 419 2 416 1.10e-17 85.5
MsG0480022009.01.T01 AT5G22660 25.783 415 278 12 22 418 12 414 1.58e-17 85.1
MsG0480022009.01.T01 AT5G22670 25.971 412 279 12 22 418 10 410 1.87e-17 84.7
MsG0480022009.01.T01 AT5G56810 26.568 271 179 7 15 273 5 267 2.06e-17 83.2
MsG0480022009.01.T01 AT1G69630 25.059 427 288 14 11 418 6 419 2.25e-17 84.7
MsG0480022009.01.T01 AT3G58900 29.114 316 197 10 23 314 2 314 2.80e-17 82.8
MsG0480022009.01.T01 AT5G41830 25.558 403 241 16 22 383 12 396 3.91e-17 84.3
MsG0480022009.01.T01 AT2G26030 23.934 422 279 18 23 416 4 411 4.09e-17 84.0
MsG0480022009.01.T01 AT3G60040 25.112 446 291 15 22 443 231 657 5.08e-17 84.3
MsG0480022009.01.T01 AT3G60040 25.112 446 291 15 22 443 229 655 5.25e-17 84.3
MsG0480022009.01.T01 AT1G55660 30.415 217 141 6 18 226 48 262 5.39e-17 82.8
MsG0480022009.01.T01 AT3G60040 25.112 446 291 15 22 443 232 658 5.49e-17 84.3
MsG0480022009.01.T01 AT5G50270 26.777 422 254 16 23 418 2 394 5.50e-17 83.2
MsG0480022009.01.T01 AT3G26922 26.718 262 160 5 15 273 6 238 5.62e-17 81.6
MsG0480022009.01.T01 AT3G60040 25.112 446 291 15 22 443 231 657 5.69e-17 84.3
MsG0480022009.01.T01 AT3G60040 25.112 446 291 15 22 443 12 438 6.16e-17 84.0
MsG0480022009.01.T01 AT2G26030 24.105 419 277 17 23 416 4 406 6.28e-17 83.2
MsG0480022009.01.T01 AT2G26030 24.105 419 277 17 23 416 4 406 6.28e-17 83.2
MsG0480022009.01.T01 AT3G58900 28.981 314 196 10 23 312 2 312 8.59e-17 81.6
MsG0480022009.01.T01 AT3G58900 28.981 314 196 10 23 312 2 312 8.59e-17 81.6
MsG0480022009.01.T01 AT3G59190 27.671 365 227 14 22 357 11 367 8.73e-17 82.4
MsG0480022009.01.T01 AT1G66310 26.097 433 289 16 12 429 8 424 8.94e-17 82.8
MsG0480022009.01.T01 AT5G56390 26.683 416 245 18 41 429 21 403 1.34e-16 82.0
MsG0480022009.01.T01 AT5G44980 22.717 427 303 12 22 431 3 419 1.94e-16 81.6
MsG0480022009.01.T01 AT5G44980 22.717 427 303 12 22 431 3 419 1.94e-16 81.6
MsG0480022009.01.T01 AT2G42720 25.229 436 275 13 23 425 2 419 2.28e-16 81.6
MsG0480022009.01.T01 AT3G26930 25.121 414 267 14 22 416 20 409 3.40e-16 80.9
MsG0480022009.01.T01 AT5G27750 21.586 454 308 15 23 441 5 445 4.55e-16 80.5
MsG0480022009.01.T01 AT3G49480 25.393 445 286 13 10 430 1 423 7.51e-16 80.1
MsG0480022009.01.T01 AT5G60610 24.697 413 266 15 23 418 2 386 1.11e-15 79.0
MsG0480022009.01.T01 AT5G60610 24.697 413 266 15 23 418 2 386 1.11e-15 79.0
MsG0480022009.01.T01 AT3G52680 27.011 348 219 11 22 359 20 342 1.36e-15 78.6
MsG0480022009.01.T01 AT2G26860 23.373 415 279 11 23 418 2 396 2.91e-15 77.8
MsG0480022009.01.T01 AT2G26860 23.373 415 279 11 23 418 2 396 2.91e-15 77.8
MsG0480022009.01.T01 AT5G56410 28.095 210 131 4 32 221 12 221 2.98e-15 78.2
MsG0480022009.01.T01 AT3G59150 26.620 432 278 11 23 419 13 440 3.14e-15 78.2
MsG0480022009.01.T01 AT5G15620 27.626 438 275 17 23 434 2 423 3.17e-15 77.8
MsG0480022009.01.T01 AT3G58930 24.541 436 253 15 23 419 2 400 5.32e-15 77.4
MsG0480022009.01.T01 AT3G58930 24.541 436 253 15 23 419 2 400 5.32e-15 77.4
MsG0480022009.01.T01 AT2G04230 26.349 315 192 9 22 304 12 318 5.77e-15 77.0
MsG0480022009.01.T01 AT4G09920 26.603 312 193 11 23 321 2 290 7.55e-15 75.5
MsG0480022009.01.T01 AT4G09920 26.603 312 193 11 23 321 2 290 7.55e-15 75.5
MsG0480022009.01.T01 AT4G09920 26.603 312 193 11 23 321 2 290 7.55e-15 75.5
MsG0480022009.01.T01 AT3G49030 23.918 439 268 19 22 445 20 407 8.00e-15 76.6
MsG0480022009.01.T01 AT5G56820 22.374 438 291 12 23 445 15 418 9.23e-15 76.6
MsG0480022009.01.T01 AT5G56690 25.472 424 258 18 25 418 4 399 9.91e-15 76.3
MsG0480022009.01.T01 AT1G78760 22.897 428 293 13 22 431 15 423 1.10e-14 76.3
MsG0480022009.01.T01 AT5G02920 31.188 202 120 7 11 207 16 203 1.11e-14 74.3
MsG0480022009.01.T01 AT5G38396 24.318 440 278 16 23 422 2 426 1.33e-14 76.3
MsG0480022009.01.T01 AT1G52650 23.953 430 280 12 23 419 2 417 1.41e-14 76.3
MsG0480022009.01.T01 AT5G56370 25.432 405 249 16 23 409 2 371 1.48e-14 75.9
MsG0480022009.01.T01 AT5G56370 25.432 405 249 16 23 409 2 371 1.48e-14 75.9
MsG0480022009.01.T01 AT4G15060 27.371 369 213 15 17 341 18 375 1.67e-14 75.5
MsG0480022009.01.T01 AT4G26340 24.429 438 279 16 23 442 2 405 2.20e-14 75.1
MsG0480022009.01.T01 AT4G09920 28.774 212 141 5 23 228 2 209 2.40e-14 74.3
MsG0480022009.01.T01 AT4G09920 28.774 212 141 5 23 228 2 209 2.40e-14 74.3
MsG0480022009.01.T01 AT3G44810 26.667 405 263 13 28 408 12 406 2.70e-14 75.1
MsG0480022009.01.T01 AT4G13985 24.186 430 297 11 19 427 15 436 2.73e-14 75.1
MsG0480022009.01.T01 AT1G60400 26.190 336 211 12 17 334 8 324 2.87e-14 74.7
MsG0480022009.01.T01 AT4G00320 26.357 387 230 17 22 369 12 382 2.98e-14 75.1
MsG0480022009.01.T01 AT3G62430 27.002 437 276 15 23 434 2 420 5.03e-14 74.3
MsG0480022009.01.T01 AT4G27050 26.273 373 222 16 23 361 4 357 5.09e-14 74.3
MsG0480022009.01.T01 AT4G27050 26.273 373 222 16 23 361 4 357 5.09e-14 74.3
MsG0480022009.01.T01 AT4G27050 26.273 373 222 16 23 361 4 357 5.09e-14 74.3
MsG0480022009.01.T01 AT4G27050 26.273 373 222 16 23 361 4 357 5.09e-14 74.3
MsG0480022009.01.T01 AT4G27050 26.273 373 222 16 23 361 4 357 5.09e-14 74.3
MsG0480022009.01.T01 AT3G03030 27.715 267 179 7 23 276 2 267 5.14e-14 73.6
MsG0480022009.01.T01 AT1G06630 26.645 304 196 11 22 311 11 301 5.56e-14 72.8
MsG0480022009.01.T01 AT1G13780 26.978 278 169 10 23 277 10 276 5.63e-14 73.2
MsG0480022009.01.T01 AT3G26922 25.523 239 167 6 40 273 2 234 7.24e-14 72.4
MsG0480022009.01.T01 AT3G26922 25.523 239 167 6 40 273 2 234 7.24e-14 72.4
MsG0480022009.01.T01 AT3G51530 25.169 445 273 20 22 441 29 438 9.16e-14 73.6
MsG0480022009.01.T01 AT2G29910 27.925 265 168 9 22 275 4 256 1.87e-13 72.0
MsG0480022009.01.T01 AT2G29910 27.925 265 168 9 22 275 4 256 1.87e-13 72.0
MsG0480022009.01.T01 AT2G29910 27.925 265 168 9 22 275 4 256 1.87e-13 72.0
MsG0480022009.01.T01 AT2G29910 27.925 265 168 9 22 275 4 256 1.87e-13 72.0
MsG0480022009.01.T01 AT2G29910 27.925 265 168 9 22 275 4 256 2.67e-13 71.2
MsG0480022009.01.T01 AT2G29910 27.925 265 168 9 22 275 4 256 2.67e-13 71.2
MsG0480022009.01.T01 AT2G29910 27.925 265 168 9 22 275 28 280 3.41e-13 71.2
MsG0480022009.01.T01 AT4G03220 22.965 479 301 18 23 445 24 490 5.01e-13 71.2
MsG0480022009.01.T01 AT3G49040 25.379 264 173 10 22 273 16 267 6.50e-13 69.7
MsG0480022009.01.T01 AT5G02910 26.816 358 219 15 20 360 8 339 8.43e-13 70.1
MsG0480022009.01.T01 AT3G49020 22.807 456 290 13 13 442 12 431 8.78e-13 70.5
MsG0480022009.01.T01 AT1G13570 29.130 230 136 9 18 231 1 219 9.24e-13 69.3
MsG0480022009.01.T01 AT5G56370 25.573 262 174 8 23 276 2 250 1.00e-12 69.3
MsG0480022009.01.T01 AT5G41630 27.684 354 215 16 17 336 6 352 1.18e-12 70.1
MsG0480022009.01.T01 AT1G16940 25.381 197 130 5 23 213 11 196 1.27e-12 69.7
MsG0480022009.01.T01 AT5G02910 27.374 358 217 16 20 360 8 339 1.49e-12 69.7
MsG0480022009.01.T01 AT5G02910 27.374 358 217 16 20 360 8 339 1.53e-12 69.3
MsG0480022009.01.T01 AT5G22610 23.853 436 272 17 21 416 16 431 1.78e-12 69.7
MsG0480022009.01.T01 AT1G80960 24.508 457 286 19 5 441 36 453 1.87e-12 69.3
MsG0480022009.01.T01 AT5G44960 21.378 421 266 13 23 418 5 385 1.91e-12 69.3
MsG0480022009.01.T01 AT3G26930 23.514 387 253 14 49 416 2 364 1.98e-12 69.3
MsG0480022009.01.T01 AT1G13570 24.444 450 247 17 18 431 1 393 3.42e-12 68.6
MsG0480022009.01.T01 AT1G13570 24.444 450 247 17 18 431 1 393 3.42e-12 68.6
MsG0480022009.01.T01 AT1G80960 25.957 470 287 23 5 441 36 477 5.84e-12 68.2
MsG0480022009.01.T01 AT1G80960 25.957 470 287 23 5 441 36 477 5.84e-12 68.2
MsG0480022009.01.T01 AT1G80960 25.957 470 287 23 5 441 36 477 5.84e-12 68.2
MsG0480022009.01.T01 AT5G22610 23.944 426 254 16 21 416 16 401 6.47e-12 67.8
MsG0480022009.01.T01 AT5G38390 23.776 429 276 15 23 419 2 411 6.55e-12 67.8
MsG0480022009.01.T01 AT4G15060 28.311 219 149 6 23 234 172 389 7.43e-12 67.8
MsG0480022009.01.T01 AT5G62970 24.779 452 266 18 36 440 16 440 1.63e-11 66.6
MsG0480022009.01.T01 AT5G56430 26.316 285 181 8 145 418 58 324 1.80e-11 65.9
MsG0480022009.01.T01 AT3G49150 25.602 457 293 17 22 445 15 457 1.80e-11 66.2
MsG0480022009.01.T01 AT1G80960 25.885 452 278 22 23 441 11 438 2.28e-11 65.9
MsG0480022009.01.T01 AT3G26920 25.862 290 181 11 139 415 37 305 2.35e-11 65.5
MsG0480022009.01.T01 AT3G26920 25.862 290 181 11 139 415 37 305 2.35e-11 65.5
MsG0480022009.01.T01 AT2G29930 26.885 305 181 15 145 418 8 301 4.40e-11 64.7
MsG0480022009.01.T01 AT5G22660 25.573 262 186 4 22 277 12 270 4.69e-11 64.3
MsG0480022009.01.T01 AT5G27750 21.368 351 232 12 23 340 5 344 4.96e-11 64.7
MsG0480022009.01.T01 AT3G42770 24.940 417 267 17 28 422 4 396 5.02e-11 65.1
MsG0480022009.01.T01 AT5G03100 22.327 318 220 11 19 329 5 302 6.91e-11 63.5
MsG0480022009.01.T01 AT5G03100 22.327 318 220 11 19 329 5 302 6.91e-11 63.5
MsG0480022009.01.T01 AT1G22000 31.285 179 118 2 25 203 31 204 9.73e-11 63.9

Find 87 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAGAATTTCTTCACATTTA+TGG 0.090305 4:+67009667 MsG0480022009.01.T01:CDS
CAACATGCAGTTCGTTATTT+TGG 0.131415 4:-67009025 None:intergenic
ACTAAGTTGGATATAGTATT+TGG 0.170742 4:+67008639 MsG0480022009.01.T01:CDS
GAAAATCAAAGACGGGTAAT+TGG 0.233443 4:-67008365 None:intergenic
TAGAATTTCTTCACATTTAT+GGG 0.250696 4:+67009668 MsG0480022009.01.T01:CDS
TATCACCCACATTATGTCTT+TGG 0.262830 4:-67008224 None:intergenic
ACCTACTATTTCTAGATTCT+AGG 0.280979 4:-67008578 None:intergenic
AAACTTCACCAATCTGATTT+CGG 0.294077 4:-67009899 None:intergenic
CCTGCATTAACAATAGTTAC+TGG 0.304860 4:-67008495 None:intergenic
GTTGATGCAAATATTGATCT+TGG 0.309181 4:+67008990 MsG0480022009.01.T01:CDS
ATGTGAAGAAATTCTAGTTT+AGG 0.324682 4:-67009661 None:intergenic
ATCAATATTTGCATCAACTA+TGG 0.332138 4:-67008985 None:intergenic
GCTATCAGATGAAACTATTC+AGG 0.345809 4:+67009100 MsG0480022009.01.T01:CDS
CCGGGATGCCGAGAAACTAT+TGG 0.361036 4:-67008610 None:intergenic
ATTCTAGTTTAGGACTCTTT+CGG 0.366674 4:-67009651 None:intergenic
TTAGGGATCTTACTTATCCT+TGG 0.372669 4:+67009786 MsG0480022009.01.T01:intron
ACAAGGAAACAATTTATAGT+TGG 0.386110 4:-67008951 None:intergenic
CAAGGAAACAATTTATAGTT+GGG 0.388932 4:-67008950 None:intergenic
GATAACTGGTTAAGTGTTGC+TGG 0.395387 4:+67010291 MsG0480022009.01.T01:three_prime_UTR
AGGAACCAATTGCAAGCTTT+AGG 0.419691 4:+67010009 MsG0480022009.01.T01:CDS
CGGGATGCCGAGAAACTATT+GGG 0.428862 4:-67008609 None:intergenic
TTGATGCAAATATTGATCTT+GGG 0.429706 4:+67008991 MsG0480022009.01.T01:CDS
AAAATCAAAGACGGGTAATT+GGG 0.435838 4:-67008364 None:intergenic
TTGGTAGTGTCGAGTTTCTC+AGG 0.436628 4:+67009078 MsG0480022009.01.T01:CDS
CCATGCCTAAAGCTTGCAAT+TGG 0.438162 4:-67010014 None:intergenic
TGTGTTACCCAATAGTTTCT+CGG 0.443039 4:+67008602 MsG0480022009.01.T01:CDS
CCAGTAACTATTGTTAATGC+AGG 0.451607 4:+67008495 MsG0480022009.01.T01:CDS
ACCTAGAATCTAGAAATAGT+AGG 0.456966 4:+67008577 MsG0480022009.01.T01:CDS
GGTGACTTAGAATTTCGCTT+TGG 0.469597 4:-67008399 None:intergenic
AATTCCAACATTGAAGAAGT+TGG 0.478445 4:+67008836 MsG0480022009.01.T01:CDS
ACTAGATCTACGAGGCAATC+TGG 0.484619 4:-67008420 None:intergenic
TTCTCGTCTCTCTACGGAAG+AGG 0.486845 4:+67008296 MsG0480022009.01.T01:CDS
AAGATAATATCTTCAAGCTA+TGG 0.487718 4:-67008695 None:intergenic
ATGTCCAACTTCTTCAATGT+TGG 0.494500 4:-67008840 None:intergenic
GGTTGGATTTGTGAAGTAGT+TGG 0.497013 4:-67008446 None:intergenic
GGATCTTACTTATCCTTGGA+TGG 0.498856 4:+67009790 MsG0480022009.01.T01:CDS
TGCCCCACACTAAATCAAAC+AGG 0.498945 4:-67010149 None:intergenic
GTGCCTGTTTGATTTAGTGT+GGG 0.504671 4:+67010146 MsG0480022009.01.T01:three_prime_UTR
AAGGACAACTCTTGTAAGAC+AGG 0.508600 4:-67008774 None:intergenic
TTTATATTCTTACAAACGCA+TGG 0.508940 4:-67010242 None:intergenic
TAAACTCCAAAGACATAATG+TGG 0.514913 4:+67008218 MsG0480022009.01.T01:CDS
TACCATCAGGTACAGAATCA+AGG 0.516438 4:-67008665 None:intergenic
TATCCAACTTAGTCAATGAC+CGG 0.522921 4:-67008629 None:intergenic
CTAGGTTAAGTGTAAGATCA+TGG 0.524663 4:-67008560 None:intergenic
TTATATTCTTACAAACGCAT+GGG 0.526297 4:-67010241 None:intergenic
TTCCTTGATTCTGTACCTGA+TGG 0.531110 4:+67008663 MsG0480022009.01.T01:CDS
ATTGAGCTGTTCAGTCGTCT+TGG 0.533363 4:+67009059 MsG0480022009.01.T01:CDS
ATCCCGGTCATTGACTAAGT+TGG 0.539690 4:+67008626 MsG0480022009.01.T01:CDS
CCAATAGTTTCTCGGCATCC+CGG 0.540751 4:+67008610 MsG0480022009.01.T01:CDS
CTATGGAGGTAGAGTTAACA+AGG 0.542514 4:-67008968 None:intergenic
ACTTAAAGATAAAAGATTCA+CGG 0.544302 4:-67008916 None:intergenic
GAGATGAACATTTACTGTAC+AGG 0.544472 4:+67009949 MsG0480022009.01.T01:CDS
AATATAATGAAGAATTCCCT+CGG 0.546133 4:-67008271 None:intergenic
CAATTGCAAGCTTTAGGCAT+GGG 0.547449 4:+67010015 MsG0480022009.01.T01:CDS
AGCCGACTTCTCATTTGTGA+AGG 0.550930 4:-67008730 None:intergenic
TGTGCCTGTTTGATTTAGTG+TGG 0.555068 4:+67010145 MsG0480022009.01.T01:three_prime_UTR
AGATGAAGCCGAAATCAGAT+TGG 0.557556 4:+67009891 MsG0480022009.01.T01:CDS
CTATGGAAACAGATACCATC+AGG 0.559011 4:-67008678 None:intergenic
AGAGAAGATTTGAAACAGCA+AGG 0.559103 4:-67009838 None:intergenic
TATTCTTTCTCGTCTCTCTA+CGG 0.559151 4:+67008290 MsG0480022009.01.T01:CDS
CGCGTCAAATTCTTGAACGA+AGG 0.560621 4:-67009580 None:intergenic
CTTCTATATTAGCAACAAAG+TGG 0.565241 4:+67008328 MsG0480022009.01.T01:CDS
AATTCTCGAAAATCAAAGAC+GGG 0.570247 4:-67008372 None:intergenic
TATCCTTGGATGGTGAAGAC+TGG 0.573895 4:+67009800 MsG0480022009.01.T01:CDS
TGTCCAGTCTTCACCATCCA+AGG 0.574526 4:-67009803 None:intergenic
CCAATTGCAAGCTTTAGGCA+TGG 0.576197 4:+67010014 MsG0480022009.01.T01:CDS
AGATTGCCTCGTAGATCTAG+TGG 0.576199 4:+67008422 MsG0480022009.01.T01:CDS
TACCTTCACAAATGAGAAGT+CGG 0.580484 4:+67008728 MsG0480022009.01.T01:CDS
TCATTAACTTGCGTCACTCG+TGG 0.584904 4:+67010046 MsG0480022009.01.T01:CDS
CAGTAACTATTGTTAATGCA+GGG 0.596957 4:+67008496 MsG0480022009.01.T01:CDS
ATATAATGAAGAATTCCCTC+GGG 0.598954 4:-67008270 None:intergenic
AGAATTTCTTCACATTTATG+GGG 0.604749 4:+67009669 MsG0480022009.01.T01:CDS
TGCCTGTTTGATTTAGTGTG+GGG 0.604837 4:+67010147 MsG0480022009.01.T01:three_prime_UTR
CGAAGAAGCTGGCTGATGTG+AGG 0.621819 4:+67009989 MsG0480022009.01.T01:CDS
ATGATTAGCGATTTACCCGA+GGG 0.622620 4:+67008255 MsG0480022009.01.T01:CDS
ATGTCTGCTAATACTTCACA+AGG 0.623262 4:-67009625 None:intergenic
TAATTCTCGAAAATCAAAGA+CGG 0.624079 4:-67008373 None:intergenic
GGAACTACAATCAAAATCTG+AGG 0.624111 4:-67010112 None:intergenic
AAACAGGCACAGTCATCCGA+TGG 0.626804 4:-67010133 None:intergenic
AATATTTGCATCAACTATGG+AGG 0.633314 4:-67008982 None:intergenic
GGGAAAATAACGACTCCACA+AGG 0.633586 4:-67010221 None:intergenic
ATCCAACTTAGTCAATGACC+GGG 0.638859 4:-67008628 None:intergenic
CAACAAAGTGGAGATACTTG+TGG 0.640766 4:+67008340 MsG0480022009.01.T01:CDS
TATGATTAGCGATTTACCCG+AGG 0.648778 4:+67008254 MsG0480022009.01.T01:CDS
AAACTCCAAAGACATAATGT+GGG 0.676914 4:+67008219 MsG0480022009.01.T01:CDS
AGGACAACTCTTGTAAGACA+GGG 0.690229 4:-67008773 None:intergenic
GTTGGTCCACTAGATCTACG+AGG 0.818443 4:-67008428 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAGTTAAATTAAATG+AGG - Chr4:67009249-67009268 None:intergenic 10.0%
!! TAAAAAGTTAAATTAAATGA+GGG - Chr4:67009248-67009267 None:intergenic 10.0%
!! AAAAAGTTAAATTAAATGAG+GGG - Chr4:67009247-67009266 None:intergenic 15.0%
!! ATGTAATTGATCAAATTTAA+TGG - Chr4:67009348-67009367 None:intergenic 15.0%
!! AAAAAATGTCACATTCTTAA+GGG + Chr4:67009927-67009946 MsG0480022009.01.T01:CDS 20.0%
!! AAGAATATGCAAATAATACA+AGG - Chr4:67009480-67009499 None:intergenic 20.0%
!! ACTTAAAGATAAAAGATTCA+CGG - Chr4:67008919-67008938 None:intergenic 20.0%
!! GATCAATTACATTTCTTAAT+AGG + Chr4:67009356-67009375 MsG0480022009.01.T01:intron 20.0%
!! TAAAAAATGTCACATTCTTA+AGG + Chr4:67009926-67009945 MsG0480022009.01.T01:CDS 20.0%
!! TAGAATTTCTTCACATTTAT+GGG + Chr4:67009668-67009687 MsG0480022009.01.T01:CDS 20.0%
!! TTGCTTATATTTCATTACAA+AGG - Chr4:67009179-67009198 None:intergenic 20.0%
!!! CTGACTTGATTTTTTTTTAT+AGG + Chr4:67009315-67009334 MsG0480022009.01.T01:intron 20.0%
!!! TGTTTTATTTGATTGATAAC+TGG + Chr4:67010277-67010296 MsG0480022009.01.T01:three_prime_UTR 20.0%
! AAACAAAAACAAGTCAAGAT+CGG - Chr4:67009514-67009533 None:intergenic 25.0%
! AAATTATTGTTAGCCGTTAA+AGG - Chr4:67009731-67009750 None:intergenic 25.0%
! AAGATAATATCTTCAAGCTA+TGG - Chr4:67008698-67008717 None:intergenic 25.0%
! AATATAATGAAGAATTCCCT+CGG - Chr4:67008274-67008293 None:intergenic 25.0%
! ACAAGGAAACAATTTATAGT+TGG - Chr4:67008954-67008973 None:intergenic 25.0%
! AGAATTTCTTCACATTTATG+GGG + Chr4:67009669-67009688 MsG0480022009.01.T01:CDS 25.0%
! ATCAATATTTGCATCAACTA+TGG - Chr4:67008988-67009007 None:intergenic 25.0%
! ATGACCCAATTTATTAATCA+TGG + Chr4:67009276-67009295 MsG0480022009.01.T01:intron 25.0%
! ATTGTTAAATAAGATCGAAG+TGG - Chr4:67009209-67009228 None:intergenic 25.0%
! CAAGGAAACAATTTATAGTT+GGG - Chr4:67008953-67008972 None:intergenic 25.0%
! CTAGAATTTCTTCACATTTA+TGG + Chr4:67009667-67009686 MsG0480022009.01.T01:CDS 25.0%
! TAATTCTCGAAAATCAAAGA+CGG - Chr4:67008376-67008395 None:intergenic 25.0%
! TGTCTATTGTAAATGTTGAT+TGG + Chr4:67009448-67009467 MsG0480022009.01.T01:intron 25.0%
! TTATATTCTTACAAACGCAT+GGG - Chr4:67010244-67010263 None:intergenic 25.0%
! TTGATGCAAATATTGATCTT+GGG + Chr4:67008991-67009010 MsG0480022009.01.T01:CDS 25.0%
! TTTATATTCTTACAAACGCA+TGG - Chr4:67010245-67010264 None:intergenic 25.0%
!! ACTAAGTTGGATATAGTATT+TGG + Chr4:67008639-67008658 MsG0480022009.01.T01:CDS 25.0%
!!! ATGTGAAGAAATTCTAGTTT+AGG - Chr4:67009664-67009683 None:intergenic 25.0%
!!! CAATGAAGAGCTTTTTTATA+CGG - Chr4:67008470-67008489 None:intergenic 25.0%
!!! TGTGTATTGATTCTTGTTTA+GGG + Chr4:67009769-67009788 MsG0480022009.01.T01:intron 25.0%
!!! TTGTGTATTGATTCTTGTTT+AGG + Chr4:67009768-67009787 MsG0480022009.01.T01:intron 25.0%
AAAATCAAAGACGGGTAATT+GGG - Chr4:67008367-67008386 None:intergenic 30.0%
AAACTCCAAAGACATAATGT+GGG + Chr4:67008219-67008238 MsG0480022009.01.T01:CDS 30.0%
AAACTTCACCAATCTGATTT+CGG - Chr4:67009902-67009921 None:intergenic 30.0%
AATATTTGCATCAACTATGG+AGG - Chr4:67008985-67009004 None:intergenic 30.0%
AATTCCAACATTGAAGAAGT+TGG + Chr4:67008836-67008855 MsG0480022009.01.T01:CDS 30.0%
AATTCTCGAAAATCAAAGAC+GGG - Chr4:67008375-67008394 None:intergenic 30.0%
ACCCAATTTATTAATCATGG+AGG + Chr4:67009279-67009298 MsG0480022009.01.T01:intron 30.0%
ACCCTCCATGATTAATAAAT+TGG - Chr4:67009284-67009303 None:intergenic 30.0%
ACCTAGAATCTAGAAATAGT+AGG + Chr4:67008577-67008596 MsG0480022009.01.T01:CDS 30.0%
ATATAATGAAGAATTCCCTC+GGG - Chr4:67008273-67008292 None:intergenic 30.0%
ATCAAAAAAATCGAAGAAGC+TGG + Chr4:67009978-67009997 MsG0480022009.01.T01:CDS 30.0%
ATCACACTTCGTAATACTTA+AGG - Chr4:67009401-67009420 None:intergenic 30.0%
CAGTAACTATTGTTAATGCA+GGG + Chr4:67008496-67008515 MsG0480022009.01.T01:CDS 30.0%
CCCAATTTATTAATCATGGA+GGG + Chr4:67009280-67009299 MsG0480022009.01.T01:intron 30.0%
CCCTCCATGATTAATAAATT+GGG - Chr4:67009283-67009302 None:intergenic 30.0%
CTTCTATATTAGCAACAAAG+TGG + Chr4:67008328-67008347 MsG0480022009.01.T01:CDS 30.0%
GTTGATGCAAATATTGATCT+TGG + Chr4:67008990-67009009 MsG0480022009.01.T01:CDS 30.0%
TAAACTCCAAAGACATAATG+TGG + Chr4:67008218-67008237 MsG0480022009.01.T01:CDS 30.0%
TCACACTTCGTAATACTTAA+GGG - Chr4:67009400-67009419 None:intergenic 30.0%
! TGTGATATTTCAGATTTTCG+TGG + Chr4:67009868-67009887 MsG0480022009.01.T01:CDS 30.0%
! TTTTCACATAGATTACCTTG+TGG + Chr4:67010206-67010225 MsG0480022009.01.T01:three_prime_UTR 30.0%
!! ACCTACTATTTCTAGATTCT+AGG - Chr4:67008581-67008600 None:intergenic 30.0%
!! ATTCTAGTTTAGGACTCTTT+CGG - Chr4:67009654-67009673 None:intergenic 30.0%
!!! GATTTTGATTGTAGTTCCAT+CGG + Chr4:67010117-67010136 MsG0480022009.01.T01:three_prime_UTR 30.0%
ATGTCCAACTTCTTCAATGT+TGG - Chr4:67008843-67008862 None:intergenic 35.0%
ATGTCTGCTAATACTTCACA+AGG - Chr4:67009628-67009647 None:intergenic 35.0%
CACACTTCGTAATACTTAAG+GGG - Chr4:67009399-67009418 None:intergenic 35.0%
CATAGTTAAGACACTAGCAA+GGG - Chr4:67009537-67009556 None:intergenic 35.0%
CCAGTAACTATTGTTAATGC+AGG + Chr4:67008495-67008514 MsG0480022009.01.T01:CDS 35.0%
CCTGCATTAACAATAGTTAC+TGG - Chr4:67008498-67008517 None:intergenic 35.0%
CTAGGTTAAGTGTAAGATCA+TGG - Chr4:67008563-67008582 None:intergenic 35.0%
GAAAATCAAAGACGGGTAAT+TGG - Chr4:67008368-67008387 None:intergenic 35.0%
GAGATGAACATTTACTGTAC+AGG + Chr4:67009949-67009968 MsG0480022009.01.T01:CDS 35.0%
GCTATCAGATGAAACTATTC+AGG + Chr4:67009100-67009119 MsG0480022009.01.T01:CDS 35.0%
GGAACTACAATCAAAATCTG+AGG - Chr4:67010115-67010134 None:intergenic 35.0%
GTCCTTCGAAAAATGTTACT+GGG + Chr4:67008791-67008810 MsG0480022009.01.T01:CDS 35.0%
TACCTTCACAAATGAGAAGT+CGG + Chr4:67008728-67008747 MsG0480022009.01.T01:CDS 35.0%
TATCACCCACATTATGTCTT+TGG - Chr4:67008227-67008246 None:intergenic 35.0%
TATCCAACTTAGTCAATGAC+CGG - Chr4:67008632-67008651 None:intergenic 35.0%
TATTCTTTCTCGTCTCTCTA+CGG + Chr4:67008290-67008309 MsG0480022009.01.T01:CDS 35.0%
TGTCCTTCGAAAAATGTTAC+TGG + Chr4:67008790-67008809 MsG0480022009.01.T01:CDS 35.0%
TGTGTTACCCAATAGTTTCT+CGG + Chr4:67008602-67008621 MsG0480022009.01.T01:CDS 35.0%
TTAGGGATCTTACTTATCCT+TGG + Chr4:67009786-67009805 MsG0480022009.01.T01:intron 35.0%
TTATTGTTAGCCGTTAAAGG+TGG - Chr4:67009728-67009747 None:intergenic 35.0%
! AGAGAAGATTTGAAACAGCA+AGG - Chr4:67009841-67009860 None:intergenic 35.0%
! CAACATGCAGTTCGTTATTT+TGG - Chr4:67009028-67009047 None:intergenic 35.0%
!!! GAAGAGCTTTTTTATACGGT+TGG - Chr4:67008466-67008485 None:intergenic 35.0%
AAGGACAACTCTTGTAAGAC+AGG - Chr4:67008777-67008796 None:intergenic 40.0%
AGATGAAGCCGAAATCAGAT+TGG + Chr4:67009891-67009910 MsG0480022009.01.T01:CDS 40.0%
AGGAACCAATTGCAAGCTTT+AGG + Chr4:67010009-67010028 MsG0480022009.01.T01:CDS 40.0%
AGGACAACTCTTGTAAGACA+GGG - Chr4:67008776-67008795 None:intergenic 40.0%
ATCCAACTTAGTCAATGACC+GGG - Chr4:67008631-67008650 None:intergenic 40.0%
ATGATTAGCGATTTACCCGA+GGG + Chr4:67008255-67008274 MsG0480022009.01.T01:CDS 40.0%
CAACAAAGTGGAGATACTTG+TGG + Chr4:67008340-67008359 MsG0480022009.01.T01:CDS 40.0%
CTATGGAAACAGATACCATC+AGG - Chr4:67008681-67008700 None:intergenic 40.0%
CTATGGAGGTAGAGTTAACA+AGG - Chr4:67008971-67008990 None:intergenic 40.0%
GCATAGTTAAGACACTAGCA+AGG - Chr4:67009538-67009557 None:intergenic 40.0%
GGATCTTACTTATCCTTGGA+TGG + Chr4:67009790-67009809 MsG0480022009.01.T01:CDS 40.0%
GGTGACTTAGAATTTCGCTT+TGG - Chr4:67008402-67008421 None:intergenic 40.0%
GGTTGGATTTGTGAAGTAGT+TGG - Chr4:67008449-67008468 None:intergenic 40.0%
TACCATCAGGTACAGAATCA+AGG - Chr4:67008668-67008687 None:intergenic 40.0%
TATGATTAGCGATTTACCCG+AGG + Chr4:67008254-67008273 MsG0480022009.01.T01:CDS 40.0%
TTCCTTGATTCTGTACCTGA+TGG + Chr4:67008663-67008682 MsG0480022009.01.T01:CDS 40.0%
! GTCTTGCTCCAGATTTTCTT+CGG + Chr4:67009702-67009721 MsG0480022009.01.T01:intron 40.0%
! GTGCCTGTTTGATTTAGTGT+GGG + Chr4:67010146-67010165 MsG0480022009.01.T01:three_prime_UTR 40.0%
! TGCCTGTTTGATTTAGTGTG+GGG + Chr4:67010147-67010166 MsG0480022009.01.T01:three_prime_UTR 40.0%
! TGTGCCTGTTTGATTTAGTG+TGG + Chr4:67010145-67010164 MsG0480022009.01.T01:three_prime_UTR 40.0%
! TTTTCTTCGGCCACCTTTAA+CGG + Chr4:67009715-67009734 MsG0480022009.01.T01:intron 40.0%
!! CAATTGCAAGCTTTAGGCAT+GGG + Chr4:67010015-67010034 MsG0480022009.01.T01:CDS 40.0%
!! CTCCCAGTAACATTTTTCGA+AGG - Chr4:67008796-67008815 None:intergenic 40.0%
!! TTAGTGTGGGGCATTTTCAA+TGG + Chr4:67010159-67010178 MsG0480022009.01.T01:three_prime_UTR 40.0%
!!! CACTCGTGGTTTTGATGTTT+TGG + Chr4:67010060-67010079 MsG0480022009.01.T01:exon 40.0%
!!! CGGCTCAAAGACTTTTTTCT+GGG + Chr4:67008748-67008767 MsG0480022009.01.T01:CDS 40.0%
!!! TCGGCTCAAAGACTTTTTTC+TGG + Chr4:67008747-67008766 MsG0480022009.01.T01:CDS 40.0%
!!! TCGTGGTTTTGATGTTTTGG+CGG + Chr4:67010063-67010082 MsG0480022009.01.T01:exon 40.0%
AAAGGTGGCCGAAGAAAATC+TGG - Chr4:67009713-67009732 None:intergenic 45.0%
ACTAGATCTACGAGGCAATC+TGG - Chr4:67008423-67008442 None:intergenic 45.0%
AGATTGCCTCGTAGATCTAG+TGG + Chr4:67008422-67008441 MsG0480022009.01.T01:CDS 45.0%
ATTGAGCTGTTCAGTCGTCT+TGG + Chr4:67009059-67009078 MsG0480022009.01.T01:CDS 45.0%
CCATGCCTAAAGCTTGCAAT+TGG - Chr4:67010017-67010036 None:intergenic 45.0%
CGCGTCAAATTCTTGAACGA+AGG - Chr4:67009583-67009602 None:intergenic 45.0%
GGGAAAATAACGACTCCACA+AGG - Chr4:67010224-67010243 None:intergenic 45.0%
TATCCTTGGATGGTGAAGAC+TGG + Chr4:67009800-67009819 MsG0480022009.01.T01:CDS 45.0%
TGCCCCACACTAAATCAAAC+AGG - Chr4:67010152-67010171 None:intergenic 45.0%
! AGCCGACTTCTCATTTGTGA+AGG - Chr4:67008733-67008752 None:intergenic 45.0%
! ATCCCGGTCATTGACTAAGT+TGG + Chr4:67008626-67008645 MsG0480022009.01.T01:CDS 45.0%
!! CCAATTGCAAGCTTTAGGCA+TGG + Chr4:67010014-67010033 MsG0480022009.01.T01:CDS 45.0%
!! TCATTAACTTGCGTCACTCG+TGG + Chr4:67010046-67010065 MsG0480022009.01.T01:CDS 45.0%
!! TTGGTAGTGTCGAGTTTCTC+AGG + Chr4:67009078-67009097 MsG0480022009.01.T01:CDS 45.0%
!!! CGTGGTTTTGATGTTTTGGC+GGG + Chr4:67010064-67010083 MsG0480022009.01.T01:exon 45.0%
AAACAGGCACAGTCATCCGA+TGG - Chr4:67010136-67010155 None:intergenic 50.0%
CCAATAGTTTCTCGGCATCC+CGG + Chr4:67008610-67008629 MsG0480022009.01.T01:CDS 50.0%
CGGGATGCCGAGAAACTATT+GGG - Chr4:67008612-67008631 None:intergenic 50.0%
GTTGGTCCACTAGATCTACG+AGG - Chr4:67008431-67008450 None:intergenic 50.0%
TGTCCAGTCTTCACCATCCA+AGG - Chr4:67009806-67009825 None:intergenic 50.0%
TTCTCGTCTCTCTACGGAAG+AGG + Chr4:67008296-67008315 MsG0480022009.01.T01:CDS 50.0%
CCGGGATGCCGAGAAACTAT+TGG - Chr4:67008613-67008632 None:intergenic 55.0%
CGAAGAAGCTGGCTGATGTG+AGG + Chr4:67009989-67010008 MsG0480022009.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr4 gene 67008186 67010311 67008186 ID=MsG0480022009.01;Name=MsG0480022009.01
Chr4 mRNA 67008186 67010311 67008186 ID=MsG0480022009.01.T01;Parent=MsG0480022009.01;Name=MsG0480022009.01.T01;_AED=0.44;_eAED=0.44;_QI=0|1|0.66|1|1|1|3|237|455
Chr4 exon 67008186 67009121 67008186 ID=MsG0480022009.01.T01:exon:7411;Parent=MsG0480022009.01.T01
Chr4 exon 67009544 67009690 67009544 ID=MsG0480022009.01.T01:exon:7412;Parent=MsG0480022009.01.T01
Chr4 exon 67009790 67010311 67009790 ID=MsG0480022009.01.T01:exon:7413;Parent=MsG0480022009.01.T01
Chr4 CDS 67008186 67009121 67008186 ID=MsG0480022009.01.T01:cds;Parent=MsG0480022009.01.T01
Chr4 CDS 67009544 67009690 67009544 ID=MsG0480022009.01.T01:cds;Parent=MsG0480022009.01.T01
Chr4 CDS 67009790 67010074 67009790 ID=MsG0480022009.01.T01:cds;Parent=MsG0480022009.01.T01
Chr4 three_prime_UTR 67010075 67010311 67010075 ID=MsG0480022009.01.T01:three_prime_utr;Parent=MsG0480022009.01.T01
Gene Sequence

>MsG0480022009.01.T01

ATGGCTTCTACAATCTCATCATCAAATTTACATAAACTCCAAAGACATAATGTGGGTGATATGAAAGATATGATTAGCGATTTACCCGAGGGAATTCTTCATTATATTCTTTCTCGTCTCTCTACGGAAGAGGCTGTAAGAACTTCTATATTAGCAACAAAGTGGAGATACTTGTGGACCCAATTACCCGTCTTTGATTTTCGAGAATTATCTCCAAAGCGAAATTCTAAGTCACCAGATTGCCTCGTAGATCTAGTGGACCAACTACTTCACAAATCCAACCGTATAAAAAAGCTCTTCATTGAATTACCAGTAACTATTGTTAATGCAGGGAAAGTTAGTTCTATGTTAACTTCTGCATTGATGCATGATGTCCATGATCTTACACTTAACCTAGAATCTAGAAATAGTAGGTTTGTGTTACCCAATAGTTTCTCGGCATCCCGGTCATTGACTAAGTTGGATATAGTATTTGGCTTCCTTGATTCTGTACCTGATGGTATCTGTTTCCATAGCTTGAAGATATTATCTTTTGCACATCTTACCTTCACAAATGAGAAGTCGGCTCAAAGACTTTTTTCTGGGTGCCCTGTCTTACAAGAGTTGTCCTTCGAAAAATGTTACTGGGAGAACATAAACATTAGTGTTGCAATTCCAACATTGAAGAAGTTGGACATCTTTTTCAGATCTTCTAGTCTAGATCGTAACAGTTGTATGTTCGAAATTGATGCCGTGAATCTTTTATCTTTAAGTTACAAAAGTAACCCAACTATAAATTGTTTCCTTGTTAACTCTACCTCCATAGTTGATGCAAATATTGATCTTGGGTTTTTCTGTGTCCAAAATAACGAACTGCATGTTGCTGTATTTGCAATTGAGCTGTTCAGTCGTCTTGGTAGTGTCGAGTTTCTCAGGCTATCAGATGAAACTATTCAGTGTCTTAACTATGCAAAATCTGCTCTTCATCTTTTACCTTCGTTCAAGAATTTGACGCGTCTTGAAGTGCATTTCGATGATCCTTGTGAAGTATTAGCAGACATTCTCCGAAAGAGTCCTAAACTAGAATTTCTTCACATTTATGGGGGATCTTACTTATCCTTGGATGGTGAAGACTGGACATCAGATTCATTGCCTTGCTGTTTCAAATCTTCTCTCAAATCATGTGATATTTCAGATTTTCGTGGAGATGAAGCCGAAATCAGATTGGTGAAGTTTTTGTTAAAAAATGTCACATTCTTAAGGGAGATGAACATTTACTGTACAGGATATCTATCAAAAAAATCGAAGAAGCTGGCTGATGTGAGGAACCAATTGCAAGCTTTAGGCATGGGAAGTTGTGTCATTAACTTGCGTCACTCGTGGTTTTGA

Protein sequence

>MsG0480022009.01.T01

MASTISSSNLHKLQRHNVGDMKDMISDLPEGILHYILSRLSTEEAVRTSILATKWRYLWTQLPVFDFRELSPKRNSKSPDCLVDLVDQLLHKSNRIKKLFIELPVTIVNAGKVSSMLTSALMHDVHDLTLNLESRNSRFVLPNSFSASRSLTKLDIVFGFLDSVPDGICFHSLKILSFAHLTFTNEKSAQRLFSGCPVLQELSFEKCYWENINISVAIPTLKKLDIFFRSSSLDRNSCMFEIDAVNLLSLSYKSNPTINCFLVNSTSIVDANIDLGFFCVQNNELHVAVFAIELFSRLGSVEFLRLSDETIQCLNYAKSALHLLPSFKNLTRLEVHFDDPCEVLADILRKSPKLEFLHIYGGSYLSLDGEDWTSDSLPCCFKSSLKSCDISDFRGDEAEIRLVKFLLKNVTFLREMNIYCTGYLSKKSKKLADVRNQLQALGMGSCVINLRHSWF*