AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022024.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022024.01.T01 MTR_3g048290 66.452 465 121 4 1 431 1 464 0.0 587
MsG0480022024.01.T01 MTR_4g080787 62.979 470 128 6 1 431 1 463 0.0 538
MsG0480022024.01.T01 MTR_4g080773 62.340 470 134 5 1 431 1 466 0.0 533
MsG0480022024.01.T01 MTR_4g080773 62.340 470 134 5 1 431 1 466 0.0 533
MsG0480022024.01.T01 MTR_4g080807 57.341 361 91 2 96 427 1 327 5.60e-130 381
MsG0480022024.01.T01 MTR_4g080590 46.827 457 207 5 1 429 1 449 7.27e-121 359
MsG0480022024.01.T01 MTR_5g039950 42.026 464 191 5 1 431 1 419 8.32e-100 304
MsG0480022024.01.T01 MTR_7g023310 42.521 468 222 9 1 432 1 457 1.63e-99 305
MsG0480022024.01.T01 MTR_4g130200 42.082 461 167 5 1 431 1 391 8.06e-97 296
MsG0480022024.01.T01 MTR_4g080590 47.978 371 157 5 1 343 1 363 8.48e-95 290
MsG0480022024.01.T01 MTR_5g039970 54.545 319 138 4 5 319 1 316 4.19e-94 287
MsG0480022024.01.T01 MTR_7g023330 38.210 458 186 9 6 431 3 395 1.25e-77 246
MsG0480022024.01.T01 MTR_7g039630 42.593 378 145 4 1 343 1 341 1.48e-77 244
MsG0480022024.01.T01 MTR_2g094750 44.063 379 148 12 21 341 88 460 5.66e-71 232
MsG0480022024.01.T01 MTR_4g081030 39.220 436 211 9 1 431 1 387 3.35e-67 219
MsG0480022024.01.T01 MTR_4g080813 68.354 79 24 1 5 83 1 78 3.18e-30 112
MsG0480022024.01.T01 MTR_8g467800 25.850 441 269 11 14 411 11 436 7.89e-26 109
MsG0480022024.01.T01 MTR_2g072530 24.074 432 289 9 15 414 5 429 1.48e-24 105
MsG0480022024.01.T01 MTR_2g094450 43.529 170 77 6 201 352 31 199 2.09e-24 100
MsG0480022024.01.T01 MTR_8g467800 27.445 317 207 7 14 322 11 312 2.15e-23 100
MsG0480022024.01.T01 MTR_4g032730 25.866 433 246 11 19 391 11 428 2.85e-22 99.0
MsG0480022024.01.T01 MTR_5g084070 27.570 428 233 13 14 400 4 395 9.20e-22 97.4
MsG0480022024.01.T01 MTR_5g080710 25.481 416 255 11 18 400 28 421 1.47e-20 94.0
MsG0480022024.01.T01 MTR_8g014160 28.010 382 225 15 23 391 41 385 2.35e-20 93.2
MsG0480022024.01.T01 MTR_1g115250 28.539 438 249 20 11 412 20 429 2.58e-20 93.2
MsG0480022024.01.T01 MTR_8g062270 28.029 421 237 15 20 391 13 416 2.83e-20 93.2
MsG0480022024.01.T01 MTR_2g007450 25.822 426 246 16 23 413 16 406 7.31e-19 88.6
MsG0480022024.01.T01 MTR_7g094030 25.740 439 263 19 22 414 27 448 3.05e-18 87.0
MsG0480022024.01.T01 MTR_8g062310 25.128 390 244 14 23 391 25 387 3.82e-18 86.7
MsG0480022024.01.T01 MTR_5g005690 29.565 230 152 4 9 234 3 226 4.72e-18 86.7
MsG0480022024.01.T01 MTR_4g092430 27.545 334 207 13 11 332 31 341 7.18e-18 85.9
MsG0480022024.01.T01 MTR_8g014260 26.039 457 283 12 14 431 8 448 8.01e-18 85.9
MsG0480022024.01.T01 MTR_1g082260 35.256 156 98 1 76 228 20 175 1.31e-17 80.9
MsG0480022024.01.T01 MTR_4g092430 27.414 321 203 12 11 319 31 333 2.06e-17 84.7
MsG0480022024.01.T01 MTR_3g107160 26.961 408 226 14 19 405 6 362 2.58e-17 83.6
MsG0480022024.01.T01 MTR_8g468840 26.829 451 249 18 21 421 12 431 1.00e-16 82.4
MsG0480022024.01.T01 MTR_5g058000 25.823 395 240 10 23 412 8 354 1.49e-16 81.3
MsG0480022024.01.T01 MTR_1g041245 26.582 395 227 15 23 402 11 357 1.61e-16 81.3
MsG0480022024.01.T01 MTR_4g050250 28.571 308 184 13 8 288 6 304 2.51e-16 80.9
MsG0480022024.01.T01 MTR_5g092960 26.714 423 247 14 19 391 15 424 2.72e-16 81.3
MsG0480022024.01.T01 MTR_2g005990 30.000 210 112 7 23 210 6 202 3.08e-16 80.5
MsG0480022024.01.T01 MTR_3g107100 26.382 398 228 12 19 399 7 356 4.18e-16 80.1
MsG0480022024.01.T01 MTR_8g058965 25.891 421 260 13 14 391 4 415 4.71e-16 80.5
MsG0480022024.01.T01 MTR_5g083890 29.439 214 132 4 23 219 6 217 7.40e-16 80.1
MsG0480022024.01.T01 MTR_2g007500 33.505 194 99 7 23 208 14 185 1.18e-15 78.2
MsG0480022024.01.T01 MTR_3g023630 24.041 391 230 12 23 399 8 345 2.06e-15 77.8
MsG0480022024.01.T01 MTR_3g082890 26.485 404 228 16 23 401 97 456 2.61e-15 78.2
MsG0480022024.01.T01 MTR_2g083840 30.332 211 126 8 14 210 11 214 3.26e-15 77.8
MsG0480022024.01.T01 MTR_8g468810 25.891 421 229 17 22 387 24 416 4.32e-15 77.4
MsG0480022024.01.T01 MTR_8g445780 27.518 407 220 17 23 384 13 389 5.55e-15 76.6
MsG0480022024.01.T01 MTR_6g022500 26.515 396 227 14 19 399 97 443 6.09e-15 77.0
MsG0480022024.01.T01 MTR_7g056447 30.645 186 120 4 22 206 8 185 6.16e-15 75.5
MsG0480022024.01.T01 MTR_3g108560 24.816 407 230 12 17 405 14 362 6.63e-15 76.3
MsG0480022024.01.T01 MTR_0049s0110 24.178 426 267 18 18 413 1 400 1.18e-14 75.9
MsG0480022024.01.T01 MTR_8g468910 26.220 328 204 12 10 313 26 339 1.32e-14 75.9
MsG0480022024.01.T01 MTR_2g072730 24.524 420 230 16 14 376 9 398 1.49e-14 75.9
MsG0480022024.01.T01 MTR_7g032380 30.000 190 120 5 23 208 11 191 1.82e-14 74.7
MsG0480022024.01.T01 MTR_3g099830 23.786 412 210 14 23 403 12 350 1.97e-14 74.7
MsG0480022024.01.T01 MTR_2g082800 24.700 417 263 16 11 396 14 410 2.13e-14 75.1
MsG0480022024.01.T01 MTR_7g056433 25.063 395 250 14 18 405 7 362 2.53e-14 74.7
MsG0480022024.01.T01 MTR_1g108820 25.598 418 258 15 23 430 8 382 2.75e-14 74.3
MsG0480022024.01.T01 MTR_3g023270 24.629 337 221 10 14 346 3 310 5.30e-14 73.6
MsG0480022024.01.T01 MTR_7g075820 27.174 276 178 8 23 277 6 279 6.78e-14 73.2
MsG0480022024.01.T01 MTR_7g007080 26.066 422 197 20 22 399 3 353 7.89e-14 73.2
MsG0480022024.01.T01 MTR_5g087940 28.241 216 135 5 23 234 26 225 8.37e-14 73.2
MsG0480022024.01.T01 MTR_2g072720 23.617 470 286 17 11 431 31 476 9.34e-14 73.2
MsG0480022024.01.T01 MTR_7g115270 27.089 395 235 16 22 399 11 369 1.23e-13 72.8
MsG0480022024.01.T01 MTR_8g085430 28.947 190 129 4 23 208 11 198 1.39e-13 72.0
MsG0480022024.01.T01 MTR_8g469020 25.116 430 237 19 22 391 6 410 1.47e-13 72.8
MsG0480022024.01.T01 MTR_7g098510 24.638 414 246 16 7 405 2 364 1.82e-13 72.0
MsG0480022024.01.T01 MTR_8g465380 26.019 319 206 10 15 318 6 309 1.83e-13 72.0
MsG0480022024.01.T01 MTR_5g021550 36.000 125 74 2 19 138 15 138 1.91e-13 68.6
MsG0480022024.01.T01 MTR_8g465650 26.837 313 198 10 23 318 12 310 2.55e-13 71.2
MsG0480022024.01.T01 MTR_8g468810 27.597 308 181 13 22 311 24 307 3.15e-13 70.9
MsG0480022024.01.T01 MTR_2g007400 29.126 206 128 7 23 214 12 213 3.21e-13 71.2
MsG0480022024.01.T01 MTR_8g468810 27.597 308 181 13 22 311 24 307 3.39e-13 70.9
MsG0480022024.01.T01 MTR_8g014290 56.364 55 24 0 23 77 10 64 4.07e-13 67.4
MsG0480022024.01.T01 MTR_8g468810 27.597 308 181 13 22 311 24 307 4.34e-13 70.5
MsG0480022024.01.T01 MTR_8g468810 27.597 308 181 13 22 311 24 307 4.57e-13 70.9
MsG0480022024.01.T01 MTR_5g038430 26.210 248 170 8 2 241 73 315 4.64e-13 71.2
MsG0480022024.01.T01 MTR_0049s0110 27.165 254 164 10 18 267 1 237 6.69e-13 69.3
MsG0480022024.01.T01 MTR_4g090940 27.124 306 199 9 23 319 159 449 8.41e-13 70.5
MsG0480022024.01.T01 MTR_4g092980 25.974 308 198 11 25 319 16 306 1.17e-12 70.1
MsG0480022024.01.T01 MTR_4g024770 53.704 54 25 0 14 67 15 68 1.30e-12 63.5
MsG0480022024.01.T01 MTR_0049s0110 27.165 254 164 10 18 267 1 237 1.63e-12 68.6
MsG0480022024.01.T01 MTR_7g098480 24.439 446 205 17 7 405 2 362 1.74e-12 69.3
MsG0480022024.01.T01 MTR_0049s0110 27.165 254 164 10 18 267 1 237 1.82e-12 68.6
MsG0480022024.01.T01 MTR_4g032845 26.464 427 244 17 21 398 1 406 1.83e-12 69.3
MsG0480022024.01.T01 MTR_4g098590 28.571 196 123 4 25 208 1 191 1.93e-12 68.9
MsG0480022024.01.T01 MTR_8g077460 33.000 200 118 7 23 210 10 205 1.97e-12 68.9
MsG0480022024.01.T01 MTR_3g019200 24.516 310 213 6 17 319 2 297 2.47e-12 68.6
MsG0480022024.01.T01 MTR_6g022360 26.835 395 217 13 19 399 39 375 2.56e-12 68.6
MsG0480022024.01.T01 MTR_8g062080 30.097 206 126 8 22 218 22 218 2.56e-12 68.9
MsG0480022024.01.T01 MTR_3g105060 26.702 191 124 4 23 208 14 193 2.90e-12 68.2
MsG0480022024.01.T01 MTR_1g107385 29.268 205 120 5 23 208 32 230 3.93e-12 68.2
MsG0480022024.01.T01 MTR_2g082860 46.774 62 32 1 11 71 14 75 4.31e-12 63.5
MsG0480022024.01.T01 MTR_6g025160 26.180 233 159 6 13 242 91 313 5.19e-12 67.4
MsG0480022024.01.T01 MTR_2g008320 24.242 396 241 12 23 403 52 403 5.80e-12 67.8
MsG0480022024.01.T01 MTR_8g006910 26.173 405 229 20 2 364 33 409 6.72e-12 67.8
MsG0480022024.01.T01 MTR_3g108560 27.835 194 123 6 17 208 14 192 7.87e-12 66.2
MsG0480022024.01.T01 MTR_8g468760 25.866 433 254 19 23 422 9 407 7.94e-12 67.0
MsG0480022024.01.T01 MTR_3g026920 25.366 410 256 13 23 413 19 397 1.11e-11 66.6
MsG0480022024.01.T01 MTR_5g045510 30.412 194 120 6 23 211 12 195 1.22e-11 66.2
MsG0480022024.01.T01 MTR_7g080440 24.290 317 212 9 14 319 6 305 1.78e-11 65.9
MsG0480022024.01.T01 MTR_2g047858 33.333 192 120 5 23 210 115 302 2.20e-11 66.2
MsG0480022024.01.T01 MTR_3g107120 25.564 399 232 15 23 399 9 364 2.26e-11 65.5
MsG0480022024.01.T01 MTR_3g018680 24.330 448 252 21 2 423 3 389 2.49e-11 65.5
MsG0480022024.01.T01 MTR_7g084080 28.866 291 167 11 17 288 11 280 2.58e-11 64.7
MsG0480022024.01.T01 MTR_1g038760 50.877 57 28 0 14 70 6 62 3.11e-11 65.1
MsG0480022024.01.T01 MTR_1g038760 50.877 57 28 0 14 70 6 62 3.22e-11 64.7
MsG0480022024.01.T01 MTR_5g008950 30.270 185 117 4 25 208 1 174 3.83e-11 64.7
MsG0480022024.01.T01 MTR_8g015830 28.879 232 137 9 19 228 4 229 4.05e-11 65.1
MsG0480022024.01.T01 MTR_4g045680 24.850 334 225 11 9 333 2 318 4.24e-11 64.7
MsG0480022024.01.T01 MTR_8g015830 28.879 232 137 9 19 228 4 229 4.32e-11 65.1
MsG0480022024.01.T01 MTR_3g108150 28.877 187 121 6 23 208 13 188 4.47e-11 64.7
MsG0480022024.01.T01 MTR_4g045900 24.500 400 250 15 23 382 26 413 4.50e-11 65.1
MsG0480022024.01.T01 MTR_2g082850 28.017 232 136 11 22 236 21 238 5.12e-11 64.3
MsG0480022024.01.T01 MTR_4g051640 42.857 63 36 0 9 71 16 78 5.54e-11 61.2
MsG0480022024.01.T01 MTR_4g050930 24.924 329 204 12 8 319 14 316 5.79e-11 64.3
MsG0480022024.01.T01 MTR_8g070950 30.732 205 124 9 13 210 6 199 6.62e-11 64.3
MsG0480022024.01.T01 MTR_4g024720 35.238 105 63 2 19 121 13 114 7.06e-11 62.0
MsG0480022024.01.T01 MTR_4g092440 26.937 271 147 11 19 261 28 275 8.02e-11 64.3
MsG0480022024.01.T01 MTR_4g050930 24.924 329 204 12 8 319 14 316 8.42e-11 64.3
MsG0480022024.01.T01 MTR_2g091145 30.049 203 131 5 15 210 13 211 8.46e-11 63.9
MsG0480022024.01.T01 MTR_8g467790 30.612 196 120 7 23 208 148 337 8.81e-11 64.3
MsG0480022024.01.T01 MTR_4g050940 24.675 231 142 5 23 237 67 281 9.18e-11 64.3
MsG0480022024.01.T01 MTR_4g092440 25.904 332 192 12 19 319 28 336 9.36e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022024.01.T01 AT3G59200 27.423 485 264 17 23 432 7 478 7.49e-31 124
MsG0480022024.01.T01 AT3G58860 27.184 412 255 13 23 399 7 408 1.24e-29 120
MsG0480022024.01.T01 AT3G59200 30.000 320 192 9 23 319 7 317 2.52e-29 118
MsG0480022024.01.T01 AT3G59240 26.432 454 264 20 18 414 1 441 1.34e-27 115
MsG0480022024.01.T01 AT4G14096 27.438 441 267 16 23 422 8 436 1.61e-26 111
MsG0480022024.01.T01 AT4G14096 27.438 441 267 16 23 422 8 436 1.61e-26 111
MsG0480022024.01.T01 AT3G58900 27.273 429 255 14 23 400 2 424 1.78e-26 111
MsG0480022024.01.T01 AT4G14103 30.225 311 193 9 23 319 8 308 1.81e-26 110
MsG0480022024.01.T01 AT4G14103 30.225 311 193 9 23 319 8 308 1.81e-26 110
MsG0480022024.01.T01 AT4G14103 30.225 311 193 9 23 319 8 308 3.93e-26 110
MsG0480022024.01.T01 AT1G66290 26.540 422 255 14 20 404 26 429 4.58e-25 107
MsG0480022024.01.T01 AT2G42730 26.457 446 262 18 23 417 5 435 1.25e-24 105
MsG0480022024.01.T01 AT5G53840 26.492 419 238 12 22 399 17 406 1.77e-24 105
MsG0480022024.01.T01 AT5G38590 28.235 425 269 11 23 428 2 409 6.53e-24 103
MsG0480022024.01.T01 AT2G04230 28.118 441 277 14 14 424 3 433 1.25e-23 103
MsG0480022024.01.T01 AT3G58900 29.653 317 197 11 23 319 2 312 1.78e-23 100
MsG0480022024.01.T01 AT3G58900 29.653 317 197 11 23 319 2 312 2.84e-23 100
MsG0480022024.01.T01 AT3G58900 29.653 317 197 11 23 319 2 312 2.84e-23 100
MsG0480022024.01.T01 AT3G59210 26.696 457 272 16 19 422 3 449 4.04e-23 102
MsG0480022024.01.T01 AT3G59210 26.696 457 272 16 19 422 3 449 4.04e-23 102
MsG0480022024.01.T01 AT3G59210 26.696 457 272 16 19 422 3 449 4.04e-23 102
MsG0480022024.01.T01 AT3G59210 26.696 457 272 16 19 422 3 449 4.04e-23 102
MsG0480022024.01.T01 AT3G59210 26.696 457 272 16 19 422 3 449 4.04e-23 102
MsG0480022024.01.T01 AT4G10400 27.361 413 262 10 23 416 2 395 7.71e-23 100
MsG0480022024.01.T01 AT4G10400 27.361 413 262 10 23 416 2 395 7.71e-23 100
MsG0480022024.01.T01 AT4G10400 27.361 413 262 10 23 416 2 395 7.71e-23 100
MsG0480022024.01.T01 AT3G03030 25.517 435 259 13 23 400 2 428 4.23e-22 98.6
MsG0480022024.01.T01 AT1G58310 26.652 469 257 19 23 412 8 468 6.51e-22 98.6
MsG0480022024.01.T01 AT1G16930 26.154 325 205 9 8 319 5 307 7.34e-22 97.8
MsG0480022024.01.T01 AT1G16930 26.154 325 205 9 8 319 5 307 7.34e-22 97.8
MsG0480022024.01.T01 AT1G16930 26.154 325 205 9 8 319 5 307 7.34e-22 97.8
MsG0480022024.01.T01 AT3G03030 27.987 318 205 8 23 319 2 316 1.38e-21 95.5
MsG0480022024.01.T01 AT1G66310 25.280 447 262 16 11 414 7 424 5.21e-21 95.1
MsG0480022024.01.T01 AT5G56440 27.674 430 249 16 23 412 2 409 6.05e-21 95.1
MsG0480022024.01.T01 AT3G59250 26.562 448 242 18 23 426 7 411 8.88e-21 94.4
MsG0480022024.01.T01 AT3G59230 26.566 463 265 19 23 422 12 462 9.04e-21 94.7
MsG0480022024.01.T01 AT3G44810 29.195 298 200 9 28 319 12 304 9.30e-21 94.7
MsG0480022024.01.T01 AT1G66300 25.404 433 259 12 23 414 29 438 9.85e-21 94.7
MsG0480022024.01.T01 AT4G13965 33.641 217 131 5 23 237 10 215 2.03e-20 93.2
MsG0480022024.01.T01 AT4G13960 26.744 430 248 16 23 400 2 416 4.20e-20 92.8
MsG0480022024.01.T01 AT4G13960 26.744 430 248 16 23 400 2 416 4.20e-20 92.8
MsG0480022024.01.T01 AT5G60610 25.432 405 238 11 23 391 2 378 4.73e-20 92.0
MsG0480022024.01.T01 AT5G60610 25.432 405 238 11 23 391 2 378 4.73e-20 92.0
MsG0480022024.01.T01 AT3G52680 26.118 425 276 16 22 422 20 430 6.45e-20 92.0
MsG0480022024.01.T01 AT3G26922 28.679 265 168 6 23 281 14 263 1.33e-19 89.4
MsG0480022024.01.T01 AT3G26922 28.679 265 168 6 23 281 14 263 1.33e-19 89.4
MsG0480022024.01.T01 AT4G09920 28.322 286 184 5 23 293 2 281 1.82e-19 89.0
MsG0480022024.01.T01 AT4G09920 28.322 286 184 5 23 293 2 281 1.82e-19 89.0
MsG0480022024.01.T01 AT3G50710 27.778 432 241 16 23 411 2 405 2.49e-19 90.1
MsG0480022024.01.T01 AT4G09920 28.169 284 183 5 23 291 2 279 3.17e-19 87.8
MsG0480022024.01.T01 AT4G09920 28.169 284 183 5 23 291 2 279 3.17e-19 87.8
MsG0480022024.01.T01 AT4G09920 28.169 284 183 5 23 291 2 279 3.17e-19 87.8
MsG0480022024.01.T01 AT5G38590 32.701 211 135 3 23 233 2 205 3.40e-19 87.8
MsG0480022024.01.T01 AT4G00315 31.416 226 136 8 23 239 2 217 3.65e-19 89.7
MsG0480022024.01.T01 AT3G49030 25.587 426 284 17 22 426 20 433 3.97e-19 89.7
MsG0480022024.01.T01 AT3G58880 30.882 272 164 10 21 281 1 259 6.86e-19 89.0
MsG0480022024.01.T01 AT5G53635 28.758 306 194 8 24 319 1 292 9.30e-19 88.6
MsG0480022024.01.T01 AT1G78840 25.935 428 241 16 22 400 4 404 1.25e-18 88.2
MsG0480022024.01.T01 AT1G78840 25.935 428 241 16 22 400 4 404 1.25e-18 88.2
MsG0480022024.01.T01 AT4G22280 29.283 321 197 11 23 338 2 297 1.30e-18 87.0
MsG0480022024.01.T01 AT1G55030 30.734 218 141 3 16 233 12 219 1.33e-18 87.8
MsG0480022024.01.T01 AT1G55030 30.734 218 141 3 16 233 2 209 1.47e-18 87.8
MsG0480022024.01.T01 AT3G59190 26.019 319 208 10 22 319 11 322 2.01e-18 87.0
MsG0480022024.01.T01 AT4G22280 29.178 353 195 13 23 342 2 332 2.16e-18 87.0
MsG0480022024.01.T01 AT1G78750 26.139 417 260 12 23 399 18 426 2.46e-18 87.4
MsG0480022024.01.T01 AT1G78750 26.139 417 260 12 23 399 18 426 2.46e-18 87.4
MsG0480022024.01.T01 AT3G59190 26.019 319 208 10 22 319 11 322 2.68e-18 87.4
MsG0480022024.01.T01 AT5G22660 26.570 414 255 12 23 399 13 414 3.14e-18 87.0
MsG0480022024.01.T01 AT4G00160 24.429 438 292 15 22 432 15 440 4.43e-18 86.7
MsG0480022024.01.T01 AT1G55660 30.396 227 147 6 18 239 48 268 6.68e-18 85.1
MsG0480022024.01.T01 AT5G56690 25.490 408 259 12 25 399 4 399 9.01e-18 85.1
MsG0480022024.01.T01 AT1G55660 30.396 227 147 6 18 239 48 268 1.01e-17 85.5
MsG0480022024.01.T01 AT1G32375 24.762 420 242 14 23 399 2 390 1.27e-17 85.1
MsG0480022024.01.T01 AT1G32375 24.762 420 242 14 23 399 2 390 1.27e-17 85.1
MsG0480022024.01.T01 AT5G22670 26.218 431 245 14 22 403 10 416 2.25e-17 84.3
MsG0480022024.01.T01 AT5G41840 27.711 332 200 13 22 319 13 338 2.68e-17 84.7
MsG0480022024.01.T01 AT1G78760 24.939 413 257 11 23 399 16 411 3.16e-17 84.0
MsG0480022024.01.T01 AT3G59170 26.185 443 251 17 22 397 6 439 3.53e-17 84.0
MsG0480022024.01.T01 AT5G22660 28.197 305 202 7 23 319 13 308 5.11e-17 82.0
MsG0480022024.01.T01 AT3G58930 25.964 389 213 17 23 349 2 377 6.81e-17 83.2
MsG0480022024.01.T01 AT3G58930 25.964 389 213 17 23 349 2 377 6.81e-17 83.2
MsG0480022024.01.T01 AT3G58930 25.964 389 213 17 23 349 2 377 6.81e-17 83.2
MsG0480022024.01.T01 AT1G06630 27.361 413 231 15 22 396 20 401 8.10e-17 82.4
MsG0480022024.01.T01 AT3G28410 26.287 369 234 13 11 369 18 358 8.19e-17 82.8
MsG0480022024.01.T01 AT1G06630 28.618 304 197 10 22 318 11 301 8.42e-17 81.3
MsG0480022024.01.T01 AT1G06630 27.363 402 229 14 22 385 11 387 9.30e-17 82.0
MsG0480022024.01.T01 AT1G06630 27.363 402 229 14 22 385 11 387 9.30e-17 82.0
MsG0480022024.01.T01 AT1G06630 27.363 402 229 14 22 385 11 387 9.30e-17 82.0
MsG0480022024.01.T01 AT1G06630 27.363 402 229 14 22 385 11 387 9.30e-17 82.0
MsG0480022024.01.T01 AT1G80470 26.645 304 202 9 22 319 14 302 9.69e-17 82.4
MsG0480022024.01.T01 AT5G41830 26.300 327 216 10 14 319 4 326 1.04e-16 82.8
MsG0480022024.01.T01 AT4G15060 30.380 237 147 6 17 241 18 248 1.06e-16 82.0
MsG0480022024.01.T01 AT1G06630 27.966 354 207 12 22 340 11 351 1.15e-16 81.6
MsG0480022024.01.T01 AT1G06630 27.966 354 207 12 22 340 11 351 1.15e-16 81.6
MsG0480022024.01.T01 AT3G49030 25.908 413 271 17 23 426 21 407 1.18e-16 82.0
MsG0480022024.01.T01 AT1G51370 25.118 422 249 13 17 400 13 405 1.18e-16 82.0
MsG0480022024.01.T01 AT3G49150 25.455 440 266 15 23 409 16 446 1.36e-16 82.0
MsG0480022024.01.T01 AT1G69630 27.160 324 198 12 15 319 10 314 1.52e-16 82.0
MsG0480022024.01.T01 AT2G42720 27.010 311 201 9 23 319 2 300 2.31e-16 81.3
MsG0480022024.01.T01 AT3G60040 29.114 316 193 12 22 318 12 315 2.40e-16 81.6
MsG0480022024.01.T01 AT1G06630 28.045 353 206 12 23 340 12 351 3.35e-16 80.9
MsG0480022024.01.T01 AT3G58960 27.807 374 215 15 23 352 2 364 3.57e-16 80.9
MsG0480022024.01.T01 AT2G26860 25.120 418 249 12 23 399 2 396 3.58e-16 80.5
MsG0480022024.01.T01 AT2G26860 25.120 418 249 12 23 399 2 396 3.58e-16 80.5
MsG0480022024.01.T01 AT3G60040 29.393 313 196 11 22 318 229 532 3.76e-16 81.3
MsG0480022024.01.T01 AT3G60040 29.393 313 196 11 22 318 231 534 3.80e-16 81.3
MsG0480022024.01.T01 AT4G15060 30.131 229 144 5 23 241 172 394 4.30e-16 80.9
MsG0480022024.01.T01 AT3G60040 29.393 313 196 11 22 318 231 534 4.60e-16 81.3
MsG0480022024.01.T01 AT4G26340 25.255 392 256 11 23 391 2 379 4.81e-16 80.1
MsG0480022024.01.T01 AT3G60040 29.393 313 196 11 22 318 232 535 4.94e-16 81.3
MsG0480022024.01.T01 AT1G78730 24.920 313 182 8 23 319 22 297 5.80e-16 79.7
MsG0480022024.01.T01 AT3G58930 26.471 374 196 16 23 349 2 343 6.33e-16 80.1
MsG0480022024.01.T01 AT3G58930 26.471 374 196 16 23 349 2 343 6.33e-16 80.1
MsG0480022024.01.T01 AT5G38390 24.773 440 239 17 23 400 2 411 6.59e-16 80.1
MsG0480022024.01.T01 AT3G49040 29.412 221 133 7 22 233 16 222 7.78e-16 78.6
MsG0480022024.01.T01 AT5G25860 23.778 450 270 16 22 422 11 436 1.14e-15 79.3
MsG0480022024.01.T01 AT1G51370 25.974 385 225 11 17 367 13 371 1.34e-15 78.6
MsG0480022024.01.T01 AT1G56610 26.575 365 213 12 25 345 12 365 1.43e-15 79.0
MsG0480022024.01.T01 AT3G52680 30.698 215 138 6 22 233 20 226 1.49e-15 78.2
MsG0480022024.01.T01 AT1G56610 26.575 365 213 12 25 345 75 428 1.73e-15 79.0
MsG0480022024.01.T01 AT4G00320 25.688 327 218 10 14 319 4 326 2.18e-15 78.6
MsG0480022024.01.T01 AT5G22730 24.368 435 257 14 22 404 27 441 2.20e-15 78.6
MsG0480022024.01.T01 AT5G22730 24.368 435 257 14 22 404 27 441 2.20e-15 78.6
MsG0480022024.01.T01 AT5G02700 26.944 360 222 14 11 359 17 346 2.40e-15 78.2
MsG0480022024.01.T01 AT4G13985 26.266 316 206 12 20 319 16 320 3.44e-15 77.8
MsG0480022024.01.T01 AT4G26350 30.412 194 117 5 23 210 2 183 4.48e-15 77.4
MsG0480022024.01.T01 AT3G03040 25.000 372 227 10 23 349 2 366 4.66e-15 77.4
MsG0480022024.01.T01 AT3G58940 26.267 434 252 19 23 410 2 413 4.90e-15 77.8
MsG0480022024.01.T01 AT3G58940 26.267 434 252 19 23 410 2 413 4.90e-15 77.8
MsG0480022024.01.T01 AT3G59160 23.246 456 262 16 22 412 12 444 5.44e-15 77.0
MsG0480022024.01.T01 AT5G02930 26.271 354 219 13 17 358 22 345 5.67e-15 77.0
MsG0480022024.01.T01 AT5G22700 26.456 412 243 16 14 400 34 410 6.04e-15 77.0
MsG0480022024.01.T01 AT5G22610 27.445 317 201 9 21 319 16 321 7.97e-15 76.6
MsG0480022024.01.T01 AT5G56820 21.951 410 265 13 22 406 14 393 8.50e-15 76.3
MsG0480022024.01.T01 AT1G52650 24.942 433 253 16 23 400 2 417 9.19e-15 76.6
MsG0480022024.01.T01 AT1G51370 27.124 306 195 8 17 320 13 292 9.49e-15 75.5
MsG0480022024.01.T01 AT5G56810 28.571 224 143 7 15 231 5 218 1.17e-14 74.7
MsG0480022024.01.T01 AT3G14710 27.078 421 256 18 19 408 22 422 1.46e-14 75.9
MsG0480022024.01.T01 AT5G44950 25.879 313 200 10 23 319 4 300 2.16e-14 75.1
MsG0480022024.01.T01 AT3G26930 27.047 403 234 11 23 391 21 397 2.34e-14 75.1
MsG0480022024.01.T01 AT5G56810 30.542 203 124 7 15 210 5 197 2.38e-14 75.1
MsG0480022024.01.T01 AT5G56410 28.700 223 146 3 30 239 10 232 2.54e-14 75.1
MsG0480022024.01.T01 AT5G56400 26.471 442 272 12 23 431 33 454 4.69e-14 74.3
MsG0480022024.01.T01 AT1G64540 26.250 320 191 10 23 319 5 302 5.66e-14 73.9
MsG0480022024.01.T01 AT1G64540 26.250 320 191 10 23 319 5 302 5.66e-14 73.9
MsG0480022024.01.T01 AT5G22610 29.798 198 122 4 21 210 16 204 5.74e-14 73.9
MsG0480022024.01.T01 AT5G53640 29.381 194 114 6 23 210 22 198 5.78e-14 71.2
MsG0480022024.01.T01 AT3G49480 23.874 444 266 15 22 417 11 430 5.92e-14 73.9
MsG0480022024.01.T01 AT5G35995 27.676 383 207 15 23 359 5 363 5.92e-14 73.9
MsG0480022024.01.T01 AT5G35995 27.676 383 207 15 23 359 5 363 5.92e-14 73.9
MsG0480022024.01.T01 AT2G26030 23.113 424 256 14 23 397 4 406 9.14e-14 73.2
MsG0480022024.01.T01 AT2G26030 23.113 424 256 14 23 397 4 406 9.14e-14 73.2
MsG0480022024.01.T01 AT3G44060 24.916 297 207 7 28 319 4 289 1.06e-13 73.2
MsG0480022024.01.T01 AT2G26030 23.913 322 204 11 23 322 4 306 1.17e-13 72.8
MsG0480022024.01.T01 AT5G22720 29.960 247 141 10 22 255 22 249 1.56e-13 72.8
MsG0480022024.01.T01 AT2G29930 26.933 375 196 19 23 349 12 356 1.71e-13 72.4
MsG0480022024.01.T01 AT2G29930 26.933 375 196 19 23 349 12 356 1.71e-13 72.4
MsG0480022024.01.T01 AT1G13780 21.951 451 292 15 23 426 10 447 1.79e-13 72.4
MsG0480022024.01.T01 AT3G51530 23.364 428 283 13 22 422 29 438 1.93e-13 72.4
MsG0480022024.01.T01 AT5G22700 24.887 442 253 17 14 400 34 451 2.27e-13 72.0
MsG0480022024.01.T01 AT3G42770 22.378 429 261 13 28 412 4 404 2.50e-13 72.4
MsG0480022024.01.T01 AT3G44090 21.905 420 298 11 28 432 29 433 2.81e-13 71.6
MsG0480022024.01.T01 AT5G38570 26.291 426 234 17 23 428 2 367 3.61e-13 71.2
MsG0480022024.01.T01 AT5G56420 26.222 225 158 3 22 245 5 222 4.99e-13 70.9
MsG0480022024.01.T01 AT5G56420 26.222 225 158 3 22 245 5 222 4.99e-13 70.9
MsG0480022024.01.T01 AT5G56420 26.222 225 158 3 22 245 5 222 4.99e-13 70.9
MsG0480022024.01.T01 AT4G27050 26.984 378 216 15 22 351 3 368 5.14e-13 70.9
MsG0480022024.01.T01 AT4G27050 26.984 378 216 15 22 351 3 368 5.14e-13 70.9
MsG0480022024.01.T01 AT4G27050 26.984 378 216 15 22 351 3 368 5.14e-13 70.9
MsG0480022024.01.T01 AT4G27050 26.984 378 216 15 22 351 3 368 5.14e-13 70.9
MsG0480022024.01.T01 AT4G27050 26.984 378 216 15 22 351 3 368 5.14e-13 70.9
MsG0480022024.01.T01 AT1G13780 24.127 315 213 9 23 319 10 316 6.12e-13 70.1
MsG0480022024.01.T01 AT5G22730 26.484 219 145 4 23 236 28 235 6.36e-13 70.5
MsG0480022024.01.T01 AT5G38396 23.918 439 256 15 23 400 2 423 7.95e-13 70.5
MsG0480022024.01.T01 AT1G05080 28.996 269 172 7 22 283 12 268 1.28e-12 69.7
MsG0480022024.01.T01 AT5G22700 25.115 434 246 17 22 400 5 414 1.61e-12 69.3
MsG0480022024.01.T01 AT5G22700 25.115 434 246 17 22 400 5 414 1.61e-12 69.3
MsG0480022024.01.T01 AT5G22700 25.115 434 246 17 22 400 5 414 1.61e-12 69.3
MsG0480022024.01.T01 AT5G22700 25.115 434 246 17 22 400 5 414 1.61e-12 69.3
MsG0480022024.01.T01 AT5G56380 27.397 219 141 6 23 231 2 212 2.95e-12 68.6
MsG0480022024.01.T01 AT5G56380 27.397 219 141 6 23 231 2 212 2.95e-12 68.6
MsG0480022024.01.T01 AT5G62970 25.304 411 232 14 32 418 12 371 3.72e-12 68.2
MsG0480022024.01.T01 AT3G26922 25.703 249 164 6 39 281 1 234 3.74e-12 67.0
MsG0480022024.01.T01 AT3G26922 25.703 249 164 6 39 281 1 234 3.74e-12 67.0
MsG0480022024.01.T01 AT3G49020 23.733 434 282 13 22 426 21 434 4.35e-12 68.2
MsG0480022024.01.T01 AT5G44940 28.708 209 122 9 23 218 5 199 9.92e-12 66.6
MsG0480022024.01.T01 AT5G41630 26.444 329 201 12 23 319 12 331 1.45e-11 66.6
MsG0480022024.01.T01 AT5G02910 26.244 442 261 24 13 422 2 410 1.91e-11 66.2
MsG0480022024.01.T01 AT5G02920 25.877 228 147 7 11 236 16 223 2.52e-11 64.3
MsG0480022024.01.T01 AT3G59000 24.099 444 271 14 23 410 2 435 2.72e-11 65.9
MsG0480022024.01.T01 AT3G59150 26.814 317 201 9 22 319 12 316 2.76e-11 65.9
MsG0480022024.01.T01 AT5G02910 29.592 196 110 10 13 201 2 176 3.38e-11 64.7
MsG0480022024.01.T01 AT5G02910 29.592 196 110 10 13 201 2 176 3.64e-11 64.7
MsG0480022024.01.T01 AT5G50270 25.659 417 246 15 23 399 2 394 5.62e-11 64.3
MsG0480022024.01.T01 AT5G38392 26.728 217 132 8 23 222 2 208 6.50e-11 62.4
MsG0480022024.01.T01 AT5G54820 27.570 214 133 6 22 218 6 214 8.01e-11 64.3
MsG0480022024.01.T01 AT5G56390 22.750 400 256 14 42 408 22 401 9.42e-11 63.9

Find 80 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCACTTCTTTGCTAATA+TGG 0.190059 4:+67131438 None:intergenic
TATTTAGGTACATAACTATT+TGG 0.227357 4:-67130222 MsG0480022024.01.T01:intron
CTAGTGAAAGTCTAAGAAAT+TGG 0.235103 4:+67131191 None:intergenic
ACTAGGGAGGTCAGGTTAAC+AGG 0.276184 4:+67130776 None:intergenic
CGGAACCAATTGGAAGATTT+AGG 0.280936 4:-67129999 MsG0480022024.01.T01:CDS
ATATTGATCTCCCCTAAATA+TGG 0.281172 4:+67130071 None:intergenic
TAACTTTGTGTGGTTGTTAT+TGG 0.288382 4:-67130961 MsG0480022024.01.T01:CDS
AGGCTCTCTGTTGTAATATC+TGG 0.291220 4:-67131274 MsG0480022024.01.T01:CDS
GGAAGTTCTTACAGCATCTT+TGG 0.293982 4:+67131459 None:intergenic
TTGTGATATACTTAACAAAT+TGG 0.295393 4:+67130102 None:intergenic
ATGTTGCAATTTCCACATTA+AGG 0.299381 4:-67130919 MsG0480022024.01.T01:CDS
ACTCGAAAGCTGAGAAACTA+TGG 0.326956 4:+67131140 None:intergenic
TCGAGTCATTGAATGAACTA+TGG 0.335566 4:-67131123 MsG0480022024.01.T01:CDS
CTTCCAGTTTAGGAGTCTTA+AGG 0.335802 4:+67130356 None:intergenic
TTGAAACTATTAATTTCTTC+AGG 0.338078 4:+67131050 None:intergenic
GAGACATTTAACAGATGATA+TGG 0.353381 4:-67130039 MsG0480022024.01.T01:CDS
AACTTTGTGTGGTTGTTATT+GGG 0.369418 4:-67130960 MsG0480022024.01.T01:CDS
CTGGAAGTCCTCGAGATTCC+TGG 0.370921 4:-67130340 MsG0480022024.01.T01:CDS
ATTTGATGACACGACTTTCC+AGG 0.372384 4:+67129976 None:intergenic
TCTCCTTAAGACTCCTAAAC+TGG 0.375727 4:-67130359 MsG0480022024.01.T01:CDS
ACAGGGATAAATTCTATTGT+TGG 0.393270 4:+67130794 None:intergenic
ACTATTAATTTCTTCAGGAC+AGG 0.412567 4:+67131055 None:intergenic
ATCTCGAGGACTTCCAGTTT+AGG 0.427512 4:+67130346 None:intergenic
TATTGATCTCCCCTAAATAT+GGG 0.429260 4:+67130072 None:intergenic
AATTTCCTCTTAAATCTAGT+TGG 0.434383 4:-67131328 MsG0480022024.01.T01:CDS
GAACACTGATGAAGCACTAA+TGG 0.441019 4:-67130386 MsG0480022024.01.T01:CDS
ATCTTCCAACTAGATTTAAG+AGG 0.442467 4:+67131323 None:intergenic
AAAGTTAACTCTTGTAAGAC+AGG 0.445718 4:+67130977 None:intergenic
CCAGGCCTAAATCTTCCAAT+TGG 0.447828 4:+67129994 None:intergenic
AAAGCCACCAAATTCAGAAA+AGG 0.466599 4:-67131354 MsG0480022024.01.T01:CDS
CAAAATCAAAGACAGATAAG+TGG 0.472743 4:+67131404 None:intergenic
GTTGATGCAGCTATTGATCT+CGG 0.473886 4:-67130755 MsG0480022024.01.T01:CDS
CTGCATCAACTAGGGAGGTC+AGG 0.474471 4:+67130768 None:intergenic
GTTCTTACAGCATCTTTGGT+AGG 0.480673 4:+67131463 None:intergenic
GGCTGATGTTCGGAACCAAT+TGG 0.484333 4:-67130009 MsG0480022024.01.T01:CDS
TGTTGTAATATCTGGAAATA+CGG 0.486914 4:-67131266 MsG0480022024.01.T01:CDS
AACAGATGATATGGAGAAGA+TGG 0.490640 4:-67130030 MsG0480022024.01.T01:CDS
CAAAGAAGTGGAGGCACTTG+TGG 0.494022 4:-67131429 MsG0480022024.01.T01:CDS
TTCTTACAGCATCTTTGGTA+GGG 0.496479 4:+67131464 None:intergenic
AAGCCACCAAATTCAGAAAA+GGG 0.501532 4:-67131353 MsG0480022024.01.T01:CDS
TGGAGAAGATGGCTGATGTT+CGG 0.503072 4:-67130019 MsG0480022024.01.T01:CDS
TCATTGAATGAACTATGGTT+AGG 0.509220 4:-67131118 MsG0480022024.01.T01:CDS
GATCAATAGCTGCATCAACT+AGG 0.512215 4:+67130759 None:intergenic
ATTGCACACTGAGCAGCATA+TGG 0.514246 4:+67130710 None:intergenic
TGTCGTCCACATTATGTCGT+TGG 0.517899 4:+67131545 None:intergenic
CAATTTCTTAGACTTTCACT+AGG 0.518321 4:-67131190 MsG0480022024.01.T01:CDS
CTCGAAAGCTGAGAAACTAT+GGG 0.523411 4:+67131141 None:intergenic
TTGATGCAGCTATTGATCTC+GGG 0.536396 4:-67130754 MsG0480022024.01.T01:CDS
CTATTAATTTCTTCAGGACA+GGG 0.541336 4:+67131056 None:intergenic
CCAATTGGAAGATTTAGGCC+TGG 0.543186 4:-67129994 MsG0480022024.01.T01:CDS
ATCAATAGCTGCATCAACTA+GGG 0.548015 4:+67130760 None:intergenic
GATTCTCAACTTCCTTAATG+TGG 0.548185 4:+67130907 None:intergenic
GGATAAATTCTATTGTTGGA+TGG 0.551742 4:+67130798 None:intergenic
ACGGATCTAATCTGATAGAA+AGG 0.552715 4:-67131294 MsG0480022024.01.T01:CDS
TAGGTACATAACTATTTGGA+CGG 0.553745 4:-67130218 MsG0480022024.01.T01:CDS
CTTCCATATTAGCAAAGAAG+TGG 0.558690 4:-67131441 MsG0480022024.01.T01:CDS
ATGCAGCTATTGAGTGGACT+TGG 0.559233 4:-67130689 MsG0480022024.01.T01:CDS
GCGCAGGCGTAGATCATGGC+TGG 0.565147 4:-67131598 None:intergenic
TAACTTTGCTAATGAGAACT+CGG 0.574216 4:-67131023 MsG0480022024.01.T01:CDS
ATATGAAGAAGAACACCCTC+AGG 0.574246 4:+67131499 None:intergenic
CTAGGGAGGTCAGGTTAACA+GGG 0.575242 4:+67130777 None:intergenic
AAAATCAAAGACAGATAAGT+GGG 0.578796 4:+67131405 None:intergenic
ACTATATAATAATACTCTTG+AGG 0.579542 4:-67130648 MsG0480022024.01.T01:intron
TTACAAGAGTTAACTTTGTG+TGG 0.580966 4:-67130971 MsG0480022024.01.T01:CDS
ATGATTAGCGATTTACCTGA+GGG 0.597368 4:-67131514 MsG0480022024.01.T01:CDS
TAAGATCCAACGACATAATG+TGG 0.599048 4:-67131551 MsG0480022024.01.T01:CDS
AGAGAAGATTTGAAACAGCA+AGG 0.601972 4:+67130170 None:intergenic
AGTCCTCGAGATTCCTGGTG+TGG 0.616512 4:-67130335 MsG0480022024.01.T01:intron
CCATATTAGCAAAGAAGTGG+AGG 0.634672 4:-67131438 MsG0480022024.01.T01:CDS
GACAGGGAAACAGATACCAC+TGG 0.636495 4:+67131072 None:intergenic
AATATAAAACATACCACACC+AGG 0.636694 4:+67130322 None:intergenic
ATTGATCTCCCCTAAATATG+GGG 0.636889 4:+67130073 None:intergenic
TATGATTAGCGATTTACCTG+AGG 0.645616 4:-67131515 MsG0480022024.01.T01:CDS
TGTGCAATGCAGCTATTGAG+TGG 0.670194 4:-67130695 MsG0480022024.01.T01:CDS
TTTGATCTACATATTACCAG+TGG 0.674166 4:-67131088 MsG0480022024.01.T01:CDS
AATAGCTGCATCAACTAGGG+AGG 0.675256 4:+67130763 None:intergenic
CTAGTTGGAAGATTACTGCA+CGG 0.676903 4:-67131313 MsG0480022024.01.T01:CDS
AAGTTAACTCTTGTAAGACA+GGG 0.696678 4:+67130978 None:intergenic
ATACCACACCAGGAATCTCG+AGG 0.698188 4:+67130332 None:intergenic
TCGAAAGCTGAGAAACTATG+GGG 0.734413 4:+67131142 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATGCTTTTTAAATTTTTA+TGG - Chr4:67131411-67131430 MsG0480022024.01.T01:CDS 10.0%
!! ACTATATAATAATACTCTTG+AGG - Chr4:67130903-67130922 MsG0480022024.01.T01:CDS 20.0%
!! TATAATAAACCCTTAACTAA+AGG + Chr4:67131001-67131020 None:intergenic 20.0%
!! TATTTAGGTACATAACTATT+TGG - Chr4:67131329-67131348 MsG0480022024.01.T01:CDS 20.0%
!! TTGAAACTATTAATTTCTTC+AGG + Chr4:67130504-67130523 None:intergenic 20.0%
!! TTGTGATATACTTAACAAAT+TGG + Chr4:67131452-67131471 None:intergenic 20.0%
! AAAATCAAAGACAGATAAGT+GGG + Chr4:67130149-67130168 None:intergenic 25.0%
! AATTTCCTCTTAAATCTAGT+TGG - Chr4:67130223-67130242 MsG0480022024.01.T01:intron 25.0%
! CATTATTAAAGCCTTGATAT+TGG + Chr4:67131276-67131295 None:intergenic 25.0%
! GTTTACGATAATACTTATTG+AGG - Chr4:67130969-67130988 MsG0480022024.01.T01:CDS 25.0%
! TGTGTCAAATTGTAAAATGT+AGG + Chr4:67131118-67131137 None:intergenic 25.0%
! TGTTGTAATATCTGGAAATA+CGG - Chr4:67130285-67130304 MsG0480022024.01.T01:intron 25.0%
AAAAAATGCCCCATATTTAG+GGG - Chr4:67131470-67131489 MsG0480022024.01.T01:CDS 30.0%
AAAGTTAACTCTTGTAAGAC+AGG + Chr4:67130577-67130596 None:intergenic 30.0%
AAGTTAACTCTTGTAAGACA+GGG + Chr4:67130576-67130595 None:intergenic 30.0%
AATATAAAACATACCACACC+AGG + Chr4:67131232-67131251 None:intergenic 30.0%
ACAAAAAATGCCCCATATTT+AGG - Chr4:67131468-67131487 MsG0480022024.01.T01:CDS 30.0%
ACAGGGATAAATTCTATTGT+TGG + Chr4:67130760-67130779 None:intergenic 30.0%
ACTATTAATTTCTTCAGGAC+AGG + Chr4:67130499-67130518 None:intergenic 30.0%
ATATTGATCTCCCCTAAATA+TGG + Chr4:67131483-67131502 None:intergenic 30.0%
ATCTTCCAACTAGATTTAAG+AGG + Chr4:67130231-67130250 None:intergenic 30.0%
ATGTTGCAATTTCCACATTA+AGG - Chr4:67130632-67130651 MsG0480022024.01.T01:intron 30.0%
CAAAAAATGCCCCATATTTA+GGG - Chr4:67131469-67131488 MsG0480022024.01.T01:CDS 30.0%
CAAAATCAAAGACAGATAAG+TGG + Chr4:67130150-67130169 None:intergenic 30.0%
CAATTTCTTAGACTTTCACT+AGG - Chr4:67130361-67130380 MsG0480022024.01.T01:CDS 30.0%
CCTTATATTTGCCAATATCA+AGG - Chr4:67131262-67131281 MsG0480022024.01.T01:CDS 30.0%
CCTTGATATTGGCAAATATA+AGG + Chr4:67131265-67131284 None:intergenic 30.0%
CTAGTGAAAGTCTAAGAAAT+TGG + Chr4:67130363-67130382 None:intergenic 30.0%
CTATTAATTTCTTCAGGACA+GGG + Chr4:67130498-67130517 None:intergenic 30.0%
GAGACATTTAACAGATGATA+TGG - Chr4:67131512-67131531 MsG0480022024.01.T01:CDS 30.0%
GGATAAATTCTATTGTTGGA+TGG + Chr4:67130756-67130775 None:intergenic 30.0%
TAACTTTGCTAATGAGAACT+CGG - Chr4:67130528-67130547 MsG0480022024.01.T01:intron 30.0%
TAACTTTGTGTGGTTGTTAT+TGG - Chr4:67130590-67130609 MsG0480022024.01.T01:intron 30.0%
TAGGTACATAACTATTTGGA+CGG - Chr4:67131333-67131352 MsG0480022024.01.T01:CDS 30.0%
TATTGATCTCCCCTAAATAT+GGG + Chr4:67131482-67131501 None:intergenic 30.0%
TCATTGAATGAACTATGGTT+AGG - Chr4:67130433-67130452 MsG0480022024.01.T01:intron 30.0%
TGTAAAATGTAGGAAGAAGA+TGG + Chr4:67131108-67131127 None:intergenic 30.0%
TTACAAGAGTTAACTTTGTG+TGG - Chr4:67130580-67130599 MsG0480022024.01.T01:intron 30.0%
TTTGATCTACATATTACCAG+TGG - Chr4:67130463-67130482 MsG0480022024.01.T01:intron 30.0%
! AACTTTGTGTGGTTGTTATT+GGG - Chr4:67130591-67130610 MsG0480022024.01.T01:intron 30.0%
! AATTTGCCCTTTTCTGAATT+TGG + Chr4:67130207-67130226 None:intergenic 30.0%
! TTGTTTAGTGGCTCTTATTT+AGG - Chr4:67131314-67131333 MsG0480022024.01.T01:CDS 30.0%
AAAGCCACCAAATTCAGAAA+AGG - Chr4:67130197-67130216 MsG0480022024.01.T01:CDS 35.0%
AACAGATGATATGGAGAAGA+TGG - Chr4:67131521-67131540 MsG0480022024.01.T01:CDS 35.0%
AAGCCACCAAATTCAGAAAA+GGG - Chr4:67130198-67130217 MsG0480022024.01.T01:CDS 35.0%
ACGGATCTAATCTGATAGAA+AGG - Chr4:67130257-67130276 MsG0480022024.01.T01:intron 35.0%
AGGATGTAGCCTTTAGTTAA+GGG - Chr4:67130989-67131008 MsG0480022024.01.T01:CDS 35.0%
ATCAATAGCTGCATCAACTA+GGG + Chr4:67130794-67130813 None:intergenic 35.0%
ATGATTAGCGATTTACCTGA+GGG - Chr4:67130037-67130056 MsG0480022024.01.T01:CDS 35.0%
ATTGATCTCCCCTAAATATG+GGG + Chr4:67131481-67131500 None:intergenic 35.0%
CTATGTTCAGCATTGTGATA+CGG + Chr4:67131041-67131060 None:intergenic 35.0%
CTTCCATATTAGCAAAGAAG+TGG - Chr4:67130110-67130129 MsG0480022024.01.T01:CDS 35.0%
GATTCTCAACTTCCTTAATG+TGG + Chr4:67130647-67130666 None:intergenic 35.0%
TAAGATCCAACGACATAATG+TGG - Chr4:67130000-67130019 MsG0480022024.01.T01:CDS 35.0%
TATGATTAGCGATTTACCTG+AGG - Chr4:67130036-67130055 MsG0480022024.01.T01:CDS 35.0%
TATGGGAAAGACACTAGTAA+TGG + Chr4:67131072-67131091 None:intergenic 35.0%
TCGAGTCATTGAATGAACTA+TGG - Chr4:67130428-67130447 MsG0480022024.01.T01:intron 35.0%
TTCTTACAGCATCTTTGGTA+GGG + Chr4:67130090-67130109 None:intergenic 35.0%
! AGAGAAGATTTGAAACAGCA+AGG + Chr4:67131384-67131403 None:intergenic 35.0%
!! ATTTGGTGGCTTTTCTCATA+CGG + Chr4:67130190-67130209 None:intergenic 35.0%
!! CTGTCAATTGACTTGTTTAG+TGG - Chr4:67131302-67131321 MsG0480022024.01.T01:CDS 35.0%
ACTCGAAAGCTGAGAAACTA+TGG + Chr4:67130414-67130433 None:intergenic 40.0%
AGGCTCTCTGTTGTAATATC+TGG - Chr4:67130277-67130296 MsG0480022024.01.T01:intron 40.0%
ATATGAAGAAGAACACCCTC+AGG + Chr4:67130055-67130074 None:intergenic 40.0%
CCATATTAGCAAAGAAGTGG+AGG - Chr4:67130113-67130132 MsG0480022024.01.T01:CDS 40.0%
CCTCCACTTCTTTGCTAATA+TGG + Chr4:67130116-67130135 None:intergenic 40.0%
CGGAACCAATTGGAAGATTT+AGG - Chr4:67131552-67131571 MsG0480022024.01.T01:CDS 40.0%
CTAGTGTCTTTCCCATACAA+AGG - Chr4:67131075-67131094 MsG0480022024.01.T01:CDS 40.0%
CTAGTTGGAAGATTACTGCA+CGG - Chr4:67130238-67130257 MsG0480022024.01.T01:intron 40.0%
CTCGAAAGCTGAGAAACTAT+GGG + Chr4:67130413-67130432 None:intergenic 40.0%
CTTCCAGTTTAGGAGTCTTA+AGG + Chr4:67131198-67131217 None:intergenic 40.0%
GAGGATGTAGCCTTTAGTTA+AGG - Chr4:67130988-67131007 MsG0480022024.01.T01:CDS 40.0%
GATCAATAGCTGCATCAACT+AGG + Chr4:67130795-67130814 None:intergenic 40.0%
GGAAGTTCTTACAGCATCTT+TGG + Chr4:67130095-67130114 None:intergenic 40.0%
GTTCTTACAGCATCTTTGGT+AGG + Chr4:67130091-67130110 None:intergenic 40.0%
GTTGATGCAGCTATTGATCT+CGG - Chr4:67130796-67130815 MsG0480022024.01.T01:CDS 40.0%
TAGTGCTTCATCAGTGTTCT+CGG + Chr4:67131164-67131183 None:intergenic 40.0%
TCGAAAGCTGAGAAACTATG+GGG + Chr4:67130412-67130431 None:intergenic 40.0%
TCTCCTTAAGACTCCTAAAC+TGG - Chr4:67131192-67131211 MsG0480022024.01.T01:CDS 40.0%
TTGATGCAGCTATTGATCTC+GGG - Chr4:67130797-67130816 MsG0480022024.01.T01:CDS 40.0%
! ATTTGATGACACGACTTTCC+AGG + Chr4:67131578-67131597 None:intergenic 40.0%
! CGGTTCAACAACTTTTCTCT+GGG - Chr4:67130548-67130567 MsG0480022024.01.T01:intron 40.0%
! GAACACTGATGAAGCACTAA+TGG - Chr4:67131165-67131184 MsG0480022024.01.T01:CDS 40.0%
! TCGGTTCAACAACTTTTCTC+TGG - Chr4:67130547-67130566 MsG0480022024.01.T01:intron 40.0%
! TTGCCCTTTTCTGAATTTGG+TGG + Chr4:67130204-67130223 None:intergenic 40.0%
!! ATGGAGAGTGTCCTTTGTAT+GGG + Chr4:67131089-67131108 None:intergenic 40.0%
AATAGCTGCATCAACTAGGG+AGG + Chr4:67130791-67130810 None:intergenic 45.0%
AGTGCTTCATCAGTGTTCTC+GGG + Chr4:67131163-67131182 None:intergenic 45.0%
ATCTCGAGGACTTCCAGTTT+AGG + Chr4:67131208-67131227 None:intergenic 45.0%
ATTGCACACTGAGCAGCATA+TGG + Chr4:67130844-67130863 None:intergenic 45.0%
CCAATTGGAAGATTTAGGCC+TGG - Chr4:67131557-67131576 MsG0480022024.01.T01:CDS 45.0%
CCAGGCCTAAATCTTCCAAT+TGG + Chr4:67131560-67131579 None:intergenic 45.0%
TGGAGAAGATGGCTGATGTT+CGG - Chr4:67131532-67131551 MsG0480022024.01.T01:CDS 45.0%
TGTCGTCCACATTATGTCGT+TGG + Chr4:67130009-67130028 None:intergenic 45.0%
TGTGCAATGCAGCTATTGAG+TGG - Chr4:67130856-67130875 MsG0480022024.01.T01:CDS 45.0%
! ATGCAGCTATTGAGTGGACT+TGG - Chr4:67130862-67130881 MsG0480022024.01.T01:CDS 45.0%
!! GATGGAGAGTGTCCTTTGTA+TGG + Chr4:67131090-67131109 None:intergenic 45.0%
ACTAGGGAGGTCAGGTTAAC+AGG + Chr4:67130778-67130797 None:intergenic 50.0%
ATACCACACCAGGAATCTCG+AGG + Chr4:67131222-67131241 None:intergenic 50.0%
CTAGGGAGGTCAGGTTAACA+GGG + Chr4:67130777-67130796 None:intergenic 50.0%
CTTCATCAGTGTTCTCGGGA+CGG + Chr4:67131159-67131178 None:intergenic 50.0%
GACAGGGAAACAGATACCAC+TGG + Chr4:67130482-67130501 None:intergenic 50.0%
GGCTGATGTTCGGAACCAAT+TGG - Chr4:67131542-67131561 MsG0480022024.01.T01:CDS 50.0%
! GGCTTTTCTCATACGGACGA+CGG + Chr4:67130183-67130202 None:intergenic 50.0%
!! CAAAGAAGTGGAGGCACTTG+TGG - Chr4:67130122-67130141 MsG0480022024.01.T01:CDS 50.0%
AGTCCTCGAGATTCCTGGTG+TGG - Chr4:67131216-67131235 MsG0480022024.01.T01:CDS 55.0%
CTGCATCAACTAGGGAGGTC+AGG + Chr4:67130786-67130805 None:intergenic 55.0%
CTGGAAGTCCTCGAGATTCC+TGG - Chr4:67131211-67131230 MsG0480022024.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr4 gene 67129968 67131605 67129968 ID=MsG0480022024.01;Name=MsG0480022024.01
Chr4 mRNA 67129968 67131605 67129968 ID=MsG0480022024.01.T01;Parent=MsG0480022024.01;Name=MsG0480022024.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|1|3|0|432
Chr4 exon 67130649 67131605 67130649 ID=MsG0480022024.01.T01:exon:18341;Parent=MsG0480022024.01.T01
Chr4 exon 67130336 67130407 67130336 ID=MsG0480022024.01.T01:exon:18340;Parent=MsG0480022024.01.T01
Chr4 exon 67129968 67130237 67129968 ID=MsG0480022024.01.T01:exon:18339;Parent=MsG0480022024.01.T01
Chr4 CDS 67130649 67131605 67130649 ID=MsG0480022024.01.T01:cds;Parent=MsG0480022024.01.T01
Chr4 CDS 67130336 67130407 67130336 ID=MsG0480022024.01.T01:cds;Parent=MsG0480022024.01.T01
Chr4 CDS 67129968 67130237 67129968 ID=MsG0480022024.01.T01:cds;Parent=MsG0480022024.01.T01
Gene Sequence

>MsG0480022024.01.T01

ATGGCTGGTACAATCTCAACAACAAATGTGCATAAGATCCAACGACATAATGTGGACGACATGAATGATATGATTAGCGATTTACCTGAGGGTGTTCTTCTTCATATTCTTTCACTACTCCCTACCAAAGATGCTGTAAGAACTTCCATATTAGCAAAGAAGTGGAGGCACTTGTGGACCCACTTATCTGTCTTTGATTTTGAAACTACTCGCCGTCGTCCGTATGAGAAAAGCCACCAAATTCAGAAAAGGGCAAATTTCCTCTTAAATCTAGTTGGAAGATTACTGCACGGATCTAATCTGATAGAAAGGCTCTCTGTTGTAATATCTGGAAATACGGTTGACGTTGATAAAGTTAGTTCTTTAATATCTTCTGCTGTGAAGCATAAAATCCAATTTCTTAGACTTTCACTAGGTAATCGAAATCTTAACTTTGTGTTACCCCATAGTTTCTCAGCTTTCGAGTCATTGAATGAACTATGGTTAGGACTTAAGTTTGATCTACATATTACCAGTGGTATCTGTTTCCCTGTCCTGAAGAAATTAATAGTTTCAAATGTTAACTTTGCTAATGAGAACTCGGTTCAACAACTTTTCTCTGGGTGCCCTGTCTTACAAGAGTTAACTTTGTGTGGTTGTTATTGGGAGAACATAATGCATATCAATGTTGCAATTTCCACATTAAGGAAGTTGAGAATCAGATTTGATAGTCTTTGTTTAGATTATGATCATGATATGACAGTCAAGATTGATGCTGTGAATCTTTTATCTTTGAGTTGCACATGCCATCCAACAATAGAATTTATCCCTGTTAACCTGACCTCCCTAGTTGATGCAGCTATTGATCTCGGGTATCTCTCTGAACATAGTGAACCATATGCTGCTCAGTGTGCAATGCAGCTATTGAGTGGACTTGGTAATGTCAAGTCTCTCAAACTATATAATAATACTCTTGAGAACACTGATGAAGCACTAATGGACATTCTCCTTAAGACTCCTAAACTGGAAGTCCTCGAGATTCCTGGTGTGGTACATAACTATTTGGACGGTGACAATTTGATATTGAACTCAGTGCCTTGCTGTTTCAAATCTTCTCTCAATCAATTATGCTTTTTAAATTTTTATGGAAATGACTATGAAATCCAATTTGTTAAGTATATCACAAAAAATGCCCCATATTTAGGGGAGATCAATATACACTGTTCGAGACATTTAACAGATGATATGGAGAAGATGGCTGATGTTCGGAACCAATTGGAAGATTTAGGCCTGGAAAGTCGTGTCATCAAATTTTTGTAA
Protein sequence

>MsG0480022024.01.T01

MAGTISTTNVHKIQRHNVDDMNDMISDLPEGVLLHILSLLPTKDAVRTSILAKKWRHLWTHLSVFDFETTRRRPYEKSHQIQKRANFLLNLVGRLLHGSNLIERLSVVISGNTVDVDKVSSLISSAVKHKIQFLRLSLGNRNLNFVLPHSFSAFESLNELWLGLKFDLHITSGICFPVLKKLIVSNVNFANENSVQQLFSGCPVLQELTLCGCYWENIMHINVAISTLRKLRIRFDSLCLDYDHDMTVKIDAVNLLSLSCTCHPTIEFIPVNLTSLVDAAIDLGYLSEHSEPYAAQCAMQLLSGLGNVKSLKLYNNTLENTDEALMDILLKTPKLEVLEIPGVVHNYLDGDNLILNSVPCCFKSSLNQLCFLNFYGNDYEIQFVKYITKNAPYLGEINIHCSRHLTDDMEKMADVRNQLEDLGLESRVIKFL*