AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014095.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014095.01.T01 MTR_3g050500 60.542 664 187 12 4 612 5 648 0.0 725
MsG0380014095.01.T01 MTR_3g051060 36.035 691 269 19 22 609 30 650 4.29e-110 347
MsG0380014095.01.T01 MTR_5g085360 33.878 673 335 21 11 609 17 653 2.63e-88 290
MsG0380014095.01.T01 MTR_3g051020 71.667 180 43 4 4 177 4 181 1.50e-82 258
MsG0380014095.01.T01 MTR_3g058570 56.769 229 90 4 389 612 81 305 2.19e-78 254
MsG0380014095.01.T01 MTR_5g085340 41.867 375 175 8 242 612 330 665 7.63e-75 254
MsG0380014095.01.T01 MTR_5g085340 42.174 230 120 7 11 234 17 239 1.15e-42 164
MsG0380014095.01.T01 MTR_5g085350 40.214 373 176 6 242 612 330 657 1.07e-73 251
MsG0380014095.01.T01 MTR_5g085350 42.616 237 122 7 7 234 14 245 1.78e-42 163
MsG0380014095.01.T01 MTR_5g085350 40.483 373 162 7 242 612 330 644 2.77e-72 247
MsG0380014095.01.T01 MTR_5g085350 42.616 237 122 7 7 234 14 245 1.42e-42 164
MsG0380014095.01.T01 MTR_3g058550 51.323 189 82 2 48 227 5 192 7.16e-55 186
MsG0380014095.01.T01 MTR_2g020510 44.240 217 115 3 393 608 391 602 2.23e-45 171
MsG0380014095.01.T01 MTR_2g020510 33.990 203 126 4 28 227 17 214 1.84e-24 108
MsG0380014095.01.T01 MTR_2g020450 43.519 216 117 2 393 608 394 604 7.64e-45 170
MsG0380014095.01.T01 MTR_2g020450 34.146 205 127 5 25 226 14 213 1.90e-22 102
MsG0380014095.01.T01 MTR_2g020470 41.014 217 102 4 393 608 393 584 3.55e-37 147
MsG0380014095.01.T01 MTR_2g020470 33.824 204 125 5 28 227 17 214 1.84e-23 105
MsG0380014095.01.T01 MTR_3g055310 36.364 220 129 5 395 611 60 271 1.64e-31 125
MsG0380014095.01.T01 MTR_3g055310 36.364 220 129 5 395 611 123 334 4.49e-31 126
MsG0380014095.01.T01 MTR_5g028450 31.579 228 137 4 393 612 2 218 6.71e-31 123
MsG0380014095.01.T01 MTR_3g055310 36.364 220 129 5 395 611 203 414 1.21e-30 126
MsG0380014095.01.T01 MTR_3g055310 36.364 220 129 5 395 611 175 386 1.26e-30 125
MsG0380014095.01.T01 MTR_3g055310 36.364 220 129 5 395 611 201 412 1.70e-30 125
MsG0380014095.01.T01 MTR_3g055310 36.364 220 129 5 395 611 228 439 2.01e-30 125
MsG0380014095.01.T01 MTR_5g028190 32.301 226 144 3 391 612 239 459 4.18e-29 122
MsG0380014095.01.T01 MTR_2g438740 32.877 219 142 3 395 612 279 493 4.88e-29 122
MsG0380014095.01.T01 MTR_5g028130 31.081 222 146 3 391 608 41 259 9.60e-29 117
MsG0380014095.01.T01 MTR_3g455790 34.123 211 128 5 395 602 311 513 8.14e-28 118
MsG0380014095.01.T01 MTR_5g091220 36.866 217 126 5 395 608 316 524 3.48e-27 117
MsG0380014095.01.T01 MTR_5g028930 29.817 218 150 2 391 608 320 534 1.37e-26 115
MsG0380014095.01.T01 MTR_2g438400 31.532 222 132 5 395 608 258 467 7.88e-26 112
MsG0380014095.01.T01 MTR_3g452020 32.701 211 131 5 395 602 136 338 1.83e-24 107
MsG0380014095.01.T01 MTR_2g438700 31.308 214 144 2 395 608 402 612 2.47e-24 108
MsG0380014095.01.T01 MTR_2g017930 35.233 193 116 3 415 607 382 565 5.18e-24 107
MsG0380014095.01.T01 MTR_2g438720 30.841 214 145 2 395 608 404 614 6.68e-24 107
MsG0380014095.01.T01 MTR_3g452020 32.701 211 131 5 395 602 312 514 6.84e-24 106
MsG0380014095.01.T01 MTR_2g438640 31.163 215 142 4 395 608 404 613 1.50e-22 102
MsG0380014095.01.T01 MTR_2g438440 29.333 225 141 3 395 612 399 612 2.23e-22 102
MsG0380014095.01.T01 MTR_2g438640 35.099 151 94 3 459 608 440 587 3.07e-22 101
MsG0380014095.01.T01 MTR_2g438760 33.775 151 97 2 458 607 334 482 2.12e-20 95.5
MsG0380014095.01.T01 MTR_6g017215 33.628 113 74 1 497 608 6 118 3.64e-16 79.0
MsG0380014095.01.T01 MTR_2g438640 27.957 186 98 4 458 608 326 510 6.98e-16 81.6
MsG0380014095.01.T01 MTR_2g438470 33.333 120 78 1 453 572 380 497 5.41e-15 78.2
MsG0380014095.01.T01 MTR_2g438580 36.250 80 51 0 512 591 3 82 1.35e-14 69.7
MsG0380014095.01.T01 MTR_5g028840 35.135 111 71 1 499 608 4 114 9.77e-12 65.1
MsG0380014095.01.T01 MTR_5g028690 29.268 123 86 1 491 612 35 157 6.89e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014095.01.T01 AT3G18670 30.175 285 186 6 333 608 226 506 2.60e-33 135
MsG0380014095.01.T01 AT3G18670 32.751 229 149 3 381 608 337 561 2.95e-32 132
MsG0380014095.01.T01 AT5G35810 32.727 220 139 3 395 608 38 254 9.31e-31 124
MsG0380014095.01.T01 AT5G04700 32.129 249 161 6 365 610 337 580 6.74e-30 125
MsG0380014095.01.T01 AT5G04690 29.268 246 165 5 365 608 298 536 3.59e-27 117
MsG0380014095.01.T01 AT5G04690 29.268 246 165 5 365 608 332 570 3.82e-27 117
MsG0380014095.01.T01 AT5G04690 29.268 246 165 5 365 608 318 556 3.94e-27 117
MsG0380014095.01.T01 AT5G04680 29.457 258 165 7 365 610 201 453 6.82e-23 103
MsG0380014095.01.T01 AT5G04680 29.457 258 165 7 365 610 353 605 6.89e-23 103
MsG0380014095.01.T01 AT5G04680 29.457 258 165 7 365 610 310 562 7.08e-23 103
MsG0380014095.01.T01 AT5G04680 29.457 258 165 7 365 610 324 576 8.07e-23 103
MsG0380014095.01.T01 AT3G54065 34.586 133 80 1 483 608 8 140 1.13e-22 97.8
MsG0380014095.01.T01 AT5G04730 36.364 154 95 2 458 610 363 514 1.55e-22 102

Find 103 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGACTCTTGAAAGCATTTA+TGG 0.129391 3:-49628188 MsG0380014095.01.T01:CDS
TTCTCTATATCTTCGTTAAT+TGG 0.145931 3:-49625457 MsG0380014095.01.T01:CDS
CCGAAATGATTCCTAGTTCT+AGG 0.205672 3:-49634788 None:intergenic
AAACCCAGGTGAAATCTTTA+AGG 0.253640 3:-49625656 MsG0380014095.01.T01:CDS
GTGTTTCTCCCTTTGAATTT+CGG 0.291981 3:+49634331 None:intergenic
ATAGCAAGATTGAGATCATT+TGG 0.329448 3:+49634246 None:intergenic
CTCTTGAAGTTCTTGCTATT+AGG 0.331088 3:-49633445 MsG0380014095.01.T01:CDS
GAAAAGTGTAGTTGAAATTA+TGG 0.336550 3:-49626668 MsG0380014095.01.T01:CDS
CATCGTTAGAGTTAGTTTCA+TGG 0.341480 3:+49626461 None:intergenic
CTGTGCTTGCACGCCATAAA+AGG 0.343353 3:-49634296 MsG0380014095.01.T01:CDS
TTCAAGCGCACACATGATTT+CGG 0.347261 3:+49626504 None:intergenic
CGATGAAAATGCATTACTTA+TGG 0.347851 3:-49626443 MsG0380014095.01.T01:CDS
TCTTGGTTGTAATCATCTTC+AGG 0.373193 3:+49634759 None:intergenic
AAGGTGTTTCTGTCAAAGTA+TGG 0.373839 3:-49631078 MsG0380014095.01.T01:CDS
TTTCACACGATAAATATAAA+GGG 0.402119 3:-49634576 MsG0380014095.01.T01:CDS
CATCCTTGTTGGTTCTATGA+TGG 0.403484 3:+49625683 None:intergenic
CGAGTTCTGCGGGTGGGTAG+TGG 0.404148 3:-49634646 MsG0380014095.01.T01:CDS
CTTATTACTTGTAGCAATGA+AGG 0.409492 3:-49626605 MsG0380014095.01.T01:CDS
TATAATAATTCATTTGTATC+CGG 0.413610 3:-49633504 MsG0380014095.01.T01:CDS
GTTGTGGGAGAGGCTTTCTA+TGG 0.414537 3:-49626386 MsG0380014095.01.T01:CDS
TTCATTTCTTCTTTATCAAA+GGG 0.420989 3:+49628127 None:intergenic
TCCTCCTTAAAGATTTCACC+TGG 0.423447 3:+49625652 None:intergenic
CCTGATTCGTCATTCCCTCC+AGG 0.424428 3:+49625517 None:intergenic
CCTGGAGGGAATGACGAATC+AGG 0.427549 3:-49625517 MsG0380014095.01.T01:CDS
CTTCACCTTGCAGCATATAG+AGG 0.427598 3:-49634417 MsG0380014095.01.T01:CDS
TGTTGGTTCTATGATGGTAA+TGG 0.430755 3:+49625689 None:intergenic
ATTCAAATGCAGGCTGTCCT+TGG 0.431651 3:+49625482 None:intergenic
TAGCAAGATTGAGATCATTT+GGG 0.431676 3:+49634247 None:intergenic
TGACATTATCAAGCGCAAAC+TGG 0.436225 3:-49628086 MsG0380014095.01.T01:CDS
CGCAAGTTGTTGAGGAGTTG+TGG 0.439030 3:-49626402 MsG0380014095.01.T01:CDS
GGCGTCTCCTTTGCTACATC+AGG 0.443396 3:-49625547 MsG0380014095.01.T01:CDS
TTTCATTTCTTCTTTATCAA+AGG 0.450291 3:+49628126 None:intergenic
CCTCATCATTCATACATGAT+TGG 0.454038 3:-49628160 MsG0380014095.01.T01:CDS
ATGTAGTTGGCGAGTTCTGC+GGG 0.465898 3:-49634656 MsG0380014095.01.T01:intron
AACACTGCTTGGAGCATAGC+TGG 0.467684 3:-49626277 MsG0380014095.01.T01:CDS
AATCTTGCTATCAATGACTT+TGG 0.469171 3:-49634234 MsG0380014095.01.T01:CDS
GTGGGTAGTGGAAGACCATT+GGG 0.470970 3:-49634634 MsG0380014095.01.T01:CDS
GATTGAAGACCGAAATTCAA+AGG 0.471591 3:-49634340 MsG0380014095.01.T01:CDS
ACCGAACATTTCTCTATGAA+TGG 0.471652 3:+49634191 None:intergenic
AGTATGTGTGAATATATCAT+TGG 0.472560 3:-49634387 MsG0380014095.01.T01:CDS
AAGCATGATGATAAATATAG+TGG 0.473112 3:-49634477 MsG0380014095.01.T01:CDS
CTGATTCGTCATTCCCTCCA+GGG 0.478330 3:+49625518 None:intergenic
GCTACATCAGGCAGCGTCCC+TGG 0.483838 3:-49625535 MsG0380014095.01.T01:CDS
ATTGAAGACCGAAATTCAAA+GGG 0.485528 3:-49634339 MsG0380014095.01.T01:CDS
GGTGGGTAGTGGAAGACCAT+TGG 0.488112 3:-49634635 MsG0380014095.01.T01:CDS
ACGATAAATATAAAGGGAAA+AGG 0.492048 3:-49634570 MsG0380014095.01.T01:CDS
GTAAAGGAATCTAACAAGAA+AGG 0.492418 3:-49626628 MsG0380014095.01.T01:CDS
GTTCTATGATGGTAATGGTC+TGG 0.493000 3:+49625694 None:intergenic
ATCATTCATACATGATTGGT+GGG 0.496123 3:-49628156 MsG0380014095.01.T01:CDS
GCCATTCATAGAGAAATGTT+CGG 0.497959 3:-49634192 MsG0380014095.01.T01:intron
GTTAAGAAGAACCACATGTA+TGG 0.502378 3:-49628214 MsG0380014095.01.T01:CDS
CGCTCTATGGAGGACCAAGA+TGG 0.505349 3:-49633476 MsG0380014095.01.T01:CDS
GTTGTAGCAGCACTCGTCGC+AGG 0.505518 3:-49625568 MsG0380014095.01.T01:CDS
CAAGAGGAGAGACTCCATCT+TGG 0.506132 3:+49633462 None:intergenic
TATGTAGTTGGCGAGTTCTG+CGG 0.512758 3:-49634657 MsG0380014095.01.T01:intron
GCAAGTTGTTGAGGAGTTGT+GGG 0.512913 3:-49626401 MsG0380014095.01.T01:CDS
ATAGAGAATAATTCAAATGC+AGG 0.514035 3:+49625472 None:intergenic
AACACAACGAAAACACTGCT+TGG 0.517796 3:-49626288 MsG0380014095.01.T01:CDS
GCAGGCTGTCCTTGGAATGT+TGG 0.519808 3:+49625490 None:intergenic
AGAGCTTAACTCAAAAGTAA+AGG 0.520218 3:-49626644 MsG0380014095.01.T01:CDS
TTGTTGAGGAGTTGTGGGAG+AGG 0.525313 3:-49626396 MsG0380014095.01.T01:CDS
AGGTGTTTCTGTCAAAGTAT+GGG 0.535277 3:-49631077 MsG0380014095.01.T01:CDS
AAAATGATGTAGGTAAAGAA+AGG 0.541963 3:+49634272 None:intergenic
CATCATTCATACATGATTGG+TGG 0.542275 3:-49628157 MsG0380014095.01.T01:CDS
CTATATGCTGCAAGGTGAAG+AGG 0.554034 3:+49634420 None:intergenic
TCAGGCTGAATCCTAGAACT+AGG 0.560891 3:+49634777 None:intergenic
TTCGAGAAGTGAGTATAGCA+AGG 0.563796 3:+49625401 None:intergenic
GATGTCCCACATCATTTGCA+TGG 0.565189 3:+49626249 None:intergenic
CACAACTCCTCAACAACTTG+CGG 0.565199 3:+49626403 None:intergenic
AGGACATCAGCTTTCAAGAG+TGG 0.567710 3:-49633425 MsG0380014095.01.T01:CDS
CTCTATGAATGGCAACGTGA+AGG 0.569343 3:+49634202 None:intergenic
AGAGTGGAAATCAGCTGTCA+TGG 0.572467 3:-49633409 MsG0380014095.01.T01:CDS
TCAGGAAAACCAACATTCCA+AGG 0.573785 3:-49625499 MsG0380014095.01.T01:CDS
TAGAATTAAATTCTATACGA+AGG 0.575548 3:-49631044 MsG0380014095.01.T01:CDS
CTAATAGCAAGAACTTCAAG+AGG 0.582313 3:+49633446 None:intergenic
GAAGGAATTCAAGAAATGAA+AGG 0.582757 3:-49626736 MsG0380014095.01.T01:CDS
GTGCGGCCATGCAAATGATG+TGG 0.583903 3:-49626255 MsG0380014095.01.T01:CDS
AGAATTAAATTCTATACGAA+GGG 0.585293 3:-49631043 MsG0380014095.01.T01:CDS
TATTTGCGTGCAGCAAAACA+TGG 0.589012 3:-49626532 MsG0380014095.01.T01:CDS
ATTATCAAGCGCAAACTGGA+TGG 0.590380 3:-49628082 MsG0380014095.01.T01:intron
TAGACAACCGCAAGTTGTTG+AGG 0.590756 3:-49626410 MsG0380014095.01.T01:CDS
CCTCCTTAAAGATTTCACCT+GGG 0.592726 3:+49625653 None:intergenic
TGCTTGGAGCATAGCTGGTG+CGG 0.593017 3:-49626272 MsG0380014095.01.T01:CDS
TGAATCCTCTATATGCTGCA+AGG 0.593278 3:+49634412 None:intergenic
GAAGATGATTACAACCAAGA+TGG 0.593655 3:-49634756 MsG0380014095.01.T01:intron
GACGCTGCCTGATGTAGCAA+AGG 0.593819 3:+49625540 None:intergenic
GTGGGACATCAAGTGGTACA+AGG 0.594742 3:-49626236 MsG0380014095.01.T01:intron
CCAATCATGTATGAATGATG+AGG 0.611075 3:+49628160 None:intergenic
CATCAGGCAGCGTCCCTGGA+GGG 0.617017 3:-49625531 MsG0380014095.01.T01:CDS
AGTTGGCGAGTTCTGCGGGT+GGG 0.619563 3:-49634652 MsG0380014095.01.T01:CDS
AAATCAACACAAGAGAGAGA+AGG 0.626440 3:-49626754 MsG0380014095.01.T01:CDS
TCATTCATACATGATTGGTG+GGG 0.631063 3:-49628155 MsG0380014095.01.T01:CDS
ACATCAGGCAGCGTCCCTGG+AGG 0.634362 3:-49625532 MsG0380014095.01.T01:CDS
TTCTAGATAAAAGCATTGAG+TGG 0.638047 3:-49625618 MsG0380014095.01.T01:CDS
CCCAGGTGAAATCTTTAAGG+AGG 0.638575 3:-49625653 MsG0380014095.01.T01:CDS
TTTGATGACGTTGAAGACCA+AGG 0.639683 3:-49631013 MsG0380014095.01.T01:intron
TGCGGCCATGCAAATGATGT+GGG 0.663238 3:-49626254 MsG0380014095.01.T01:CDS
AAAAGGAACTGCATTACATG+TGG 0.664026 3:-49634553 MsG0380014095.01.T01:CDS
AAGGAACATGATGAGTGCAG+TGG 0.677824 3:+49625420 None:intergenic
AAATGATGTGGGACATCAAG+TGG 0.684085 3:-49626243 MsG0380014095.01.T01:CDS
TAGTTGGCGAGTTCTGCGGG+TGG 0.688386 3:-49634653 MsG0380014095.01.T01:CDS
AGAGTCGATCACCATACATG+TGG 0.696747 3:+49628203 None:intergenic
TTACCATCATAGAACCAACA+AGG 0.738344 3:-49625686 MsG0380014095.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTATTTTTTTTTTAA+TGG + Chr3:49633322-49633341 None:intergenic 0.0%
!! AAAAAAAAAATAAATTAACG+AGG - Chr3:49633324-49633343 MsG0380014095.01.T01:intron 10.0%
!! AATATAAAAACATAATACAA+AGG + Chr3:49630442-49630461 None:intergenic 10.0%
!!! AATGTAAAAGTTATTATTTT+TGG - Chr3:49633209-49633228 MsG0380014095.01.T01:intron 10.0%
!!! AGTTTATCTTTAATTTTTTT+TGG + Chr3:49632871-49632890 None:intergenic 10.0%
!!! ATAGTAATATTTTTATAAAC+TGG - Chr3:49632668-49632687 MsG0380014095.01.T01:intron 10.0%
!!! ATATGACAATTTTTTAAAAT+AGG + Chr3:49632808-49632827 None:intergenic 10.0%
!!! GTTTATCTTTAATTTTTTTT+GGG + Chr3:49632870-49632889 None:intergenic 10.0%
!!! TATAACAACATATAATTTTA+TGG + Chr3:49631842-49631861 None:intergenic 10.0%
!!! TATTTTTTTACTAATATAGA+AGG + Chr3:49632419-49632438 None:intergenic 10.0%
!!! TTAAAATTATGTTTTTTCAT+TGG - Chr3:49627197-49627216 MsG0380014095.01.T01:intron 10.0%
!!! TTTTTTTCACTTAATTTAAA+AGG + Chr3:49631704-49631723 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTTGAAG+AGG + Chr3:49634137-49634156 None:intergenic 10.0%
!! AAAAAAAAAAGATTATGTGT+TGG + Chr3:49629923-49629942 None:intergenic 15.0%
!! AAAAATATGATATACTAACA+AGG - Chr3:49632432-49632451 MsG0380014095.01.T01:intron 15.0%
!! AAAATATGATATACTAACAA+GGG - Chr3:49632433-49632452 MsG0380014095.01.T01:intron 15.0%
!! AATATTATTGCATTTGAATT+GGG - Chr3:49626980-49626999 MsG0380014095.01.T01:intron 15.0%
!! AATTACAAAACATTACATAA+TGG + Chr3:49629218-49629237 None:intergenic 15.0%
!! ATAATCAAATATTACAGAAA+AGG - Chr3:49629334-49629353 MsG0380014095.01.T01:intron 15.0%
!! ATACTATTGAATTTAATTGT+TGG + Chr3:49626268-49626287 None:intergenic 15.0%
!! CAAAAAAAAGTTAATCTATT+TGG + Chr3:49631187-49631206 None:intergenic 15.0%
!! CAAAATAAAAGTTAATAAAG+AGG - Chr3:49628932-49628951 MsG0380014095.01.T01:intron 15.0%
!! CTAAAATCTCTATATTTATT+AGG - Chr3:49625436-49625455 MsG0380014095.01.T01:CDS 15.0%
!! TATAATAATTCATTTGTATC+CGG - Chr3:49626660-49626679 MsG0380014095.01.T01:CDS 15.0%
!! TATTACTACTTAATTATTGT+AGG + Chr3:49629727-49629746 None:intergenic 15.0%
!! TTTACTAATATATAAGAACA+AGG + Chr3:49632634-49632653 None:intergenic 15.0%
!!! ACTAACAATATTTTATAAGT+GGG - Chr3:49628092-49628111 MsG0380014095.01.T01:CDS 15.0%
!!! ACTATTATATCTTTTTAGAA+AGG + Chr3:49629285-49629304 None:intergenic 15.0%
!!! ATATTACATGATTTAATTTG+TGG - Chr3:49631008-49631027 MsG0380014095.01.T01:intron 15.0%
!!! ATATTGATTTTAGACATATT+TGG + Chr3:49630384-49630403 None:intergenic 15.0%
!!! CATAATTTTGATAGTTTTTT+GGG - Chr3:49633078-49633097 MsG0380014095.01.T01:intron 15.0%
!!! GAAATGATTTTAAAAGTAAT+TGG + Chr3:49634189-49634208 None:intergenic 15.0%
!!! GATGTATTTGATTTAAATTT+TGG - Chr3:49631160-49631179 MsG0380014095.01.T01:intron 15.0%
!!! TATTAAGTCTTTTTCTTTTA+CGG + Chr3:49632138-49632157 None:intergenic 15.0%
!!! TGTTCTTTGTTTTTTATATT+GGG - Chr3:49627073-49627092 MsG0380014095.01.T01:intron 15.0%
!!! TTAATATTTTCACATTGAAT+TGG - Chr3:49628064-49628083 MsG0380014095.01.T01:intron 15.0%
!!! TTATAAAATTTTGGTGTTAA+AGG - Chr3:49629067-49629086 MsG0380014095.01.T01:intron 15.0%
!!! TTATCAAAATTTTATTAAGG+CGG + Chr3:49633043-49633062 None:intergenic 15.0%
!!! TTGTTCTTTGTTTTTTATAT+TGG - Chr3:49627072-49627091 MsG0380014095.01.T01:intron 15.0%
!!! TTTTCTAAATTAATTTCGTA+TGG - Chr3:49627530-49627549 MsG0380014095.01.T01:intron 15.0%
!!! TTTTTTTAACTATATGTGAA+TGG - Chr3:49634419-49634438 MsG0380014095.01.T01:CDS 15.0%
!! AAAAAAAAAAATGTGTGAAG+AGG + Chr3:49632255-49632274 None:intergenic 20.0%
!! AACATAATACAAAGGAATTA+AGG + Chr3:49630434-49630453 None:intergenic 20.0%
!! AACTCTTATCTCATTTAATA+TGG + Chr3:49627855-49627874 None:intergenic 20.0%
!! AATAAAATATGAATTACACG+TGG + Chr3:49628850-49628869 None:intergenic 20.0%
!! AATTACCATAAATATTTGAG+TGG - Chr3:49629415-49629434 MsG0380014095.01.T01:intron 20.0%
!! AGAATTAAATTCTATACGAA+GGG - Chr3:49629121-49629140 MsG0380014095.01.T01:intron 20.0%
!! ATAAATCTTAGAATTTGAGT+TGG + Chr3:49627942-49627961 None:intergenic 20.0%
!! ATTAATAGTGTTGTATTAGA+AGG - Chr3:49632774-49632793 MsG0380014095.01.T01:intron 20.0%
!! CCAAAAAACTATCAAAATTA+TGG + Chr3:49633080-49633099 None:intergenic 20.0%
!! CTACATTATAATTTATCTTG+AGG - Chr3:49628762-49628781 MsG0380014095.01.T01:intron 20.0%
!! CTTATACTTCATTAATCATT+AGG + Chr3:49631120-49631139 None:intergenic 20.0%
!! GAAAAATTGGAATTCAAAAT+TGG + Chr3:49626888-49626907 None:intergenic 20.0%
!! GAATATATCATTGGAAAAAA+TGG - Chr3:49625786-49625805 MsG0380014095.01.T01:intron 20.0%
!! GAATATTATTGCATTTGAAT+TGG - Chr3:49626979-49626998 MsG0380014095.01.T01:intron 20.0%
!! TAGAATTAAATTCTATACGA+AGG - Chr3:49629120-49629139 MsG0380014095.01.T01:intron 20.0%
!! TATCAAAAAGTGATTGAAAA+AGG - Chr3:49627270-49627289 MsG0380014095.01.T01:intron 20.0%
!! TCTTAAATTGTAAACCATAT+TGG - Chr3:49627246-49627265 MsG0380014095.01.T01:intron 20.0%
!! TTAATGAAGTATAAGCAAAT+TGG - Chr3:49631125-49631144 MsG0380014095.01.T01:intron 20.0%
!! TTAATTAAGAAATTCTCCTA+CGG - Chr3:49626457-49626476 MsG0380014095.01.T01:CDS 20.0%
!! TTCAAAAAGAAAAAATTGAC+AGG + Chr3:49631761-49631780 None:intergenic 20.0%
!! TTCATTTCTTCTTTATCAAA+GGG + Chr3:49632040-49632059 None:intergenic 20.0%
!! TTTATTATTAAGTGATTTCG+AGG - Chr3:49626940-49626959 MsG0380014095.01.T01:intron 20.0%
!! TTTCACACGATAAATATAAA+GGG - Chr3:49625588-49625607 MsG0380014095.01.T01:CDS 20.0%
!! TTTCATTTCTTCTTTATCAA+AGG + Chr3:49632041-49632060 None:intergenic 20.0%
!!! AAAAGTCTATTTTCTAAGAA+TGG - Chr3:49627909-49627928 MsG0380014095.01.T01:intron 20.0%
!!! AAAGTCTATTTTCTAAGAAT+GGG - Chr3:49627910-49627929 MsG0380014095.01.T01:intron 20.0%
!!! AAATGTTTTTATTCACCAAA+TGG - Chr3:49630905-49630924 MsG0380014095.01.T01:intron 20.0%
!!! AATGACTTTTTCAATCAAAA+TGG - Chr3:49627585-49627604 MsG0380014095.01.T01:intron 20.0%
!!! AATTTTTCATTTTGGTTTGA+TGG + Chr3:49629376-49629395 None:intergenic 20.0%
!!! ACAAAATTGATTTTATCTCA+AGG - Chr3:49632703-49632722 MsG0380014095.01.T01:intron 20.0%
!!! ACAATCTAAAATATATCCTA+CGG + Chr3:49632513-49632532 None:intergenic 20.0%
!!! AGACGTAATAATGTTTTTTA+AGG + Chr3:49632179-49632198 None:intergenic 20.0%
!!! AGCAGCTTTAAATATAATAA+TGG - Chr3:49626126-49626145 MsG0380014095.01.T01:intron 20.0%
!!! AGTTTTTTAATGTACTATAC+AGG + Chr3:49634446-49634465 None:intergenic 20.0%
!!! ATTTTGATTGAAAAAGTCAT+TGG + Chr3:49627586-49627605 None:intergenic 20.0%
!!! CCATAATTTTGATAGTTTTT+TGG - Chr3:49633077-49633096 MsG0380014095.01.T01:intron 20.0%
!!! GACTAACAATATTTTATAAG+TGG - Chr3:49628091-49628110 MsG0380014095.01.T01:CDS 20.0%
!!! GATAAAATCAATTTTGTTCA+TGG + Chr3:49632700-49632719 None:intergenic 20.0%
!!! GATATATACAGTAAGAATTT+TGG + Chr3:49626517-49626536 None:intergenic 20.0%
!!! GTCAATTTTTTCTTTTTGAA+CGG - Chr3:49631761-49631780 MsG0380014095.01.T01:intron 20.0%
!!! GTTATTTACTTGTTGATAAA+AGG - Chr3:49628462-49628481 MsG0380014095.01.T01:intron 20.0%
!!! TAAATCTTAGAATTTGAGTT+GGG + Chr3:49627941-49627960 None:intergenic 20.0%
!!! TAAGGGAAGAAATAAATTTT+TGG - Chr3:49628630-49628649 MsG0380014095.01.T01:intron 20.0%
!!! TATGTTTTACTATATGTAGT+TGG - Chr3:49625495-49625514 MsG0380014095.01.T01:CDS 20.0%
!!! TATTTTTTTAATGTCGTAGA+AGG + Chr3:49626190-49626209 None:intergenic 20.0%
!!! TCATGTCTTTTAAAGTATAA+AGG - Chr3:49628983-49629002 MsG0380014095.01.T01:intron 20.0%
!!! TGAAAAAGATAAGACATTTT+TGG - Chr3:49633466-49633485 MsG0380014095.01.T01:CDS 20.0%
!!! TGTTTATCTAAAATGATAAC+AGG - Chr3:49631453-49631472 MsG0380014095.01.T01:intron 20.0%
!!! TTATTTTTTCATTTTTCCGT+TGG - Chr3:49627301-49627320 MsG0380014095.01.T01:intron 20.0%
!!! TTGTTACTTATGTTATTTGA+GGG - Chr3:49628599-49628618 MsG0380014095.01.T01:intron 20.0%
!!! TTTAAGAATCAAGGTATTTT+GGG - Chr3:49627619-49627638 MsG0380014095.01.T01:intron 20.0%
!!! TTTAGATTAAATTTTACCGT+AGG + Chr3:49626476-49626495 None:intergenic 20.0%
!!! TTTGTTACTTATGTTATTTG+AGG - Chr3:49628598-49628617 MsG0380014095.01.T01:intron 20.0%
!!! TTTTAAGAATCAAGGTATTT+TGG - Chr3:49627618-49627637 MsG0380014095.01.T01:intron 20.0%
!!! TTTTCACACGATAAATATAA+AGG - Chr3:49625587-49625606 MsG0380014095.01.T01:CDS 20.0%
!!! TTTTTGATAAGTCTATCTAT+GGG - Chr3:49628365-49628384 MsG0380014095.01.T01:intron 20.0%
! AAAAATAGGAAAATGCTAAC+AGG + Chr3:49633267-49633286 None:intergenic 25.0%
! AAAAATTCAACCATGTCAAA+GGG - Chr3:49629505-49629524 MsG0380014095.01.T01:intron 25.0%
! AAAATGATGTAGGTAAAGAA+AGG + Chr3:49625895-49625914 None:intergenic 25.0%
! AAATTGTAGGATTAAAGTTG+TGG - Chr3:49628144-49628163 MsG0380014095.01.T01:CDS 25.0%
! AACATAAGTAACAAAAGTCA+GGG + Chr3:49628593-49628612 None:intergenic 25.0%
! AACATTACTCAACTTATTGA+CGG - Chr3:49626309-49626328 MsG0380014095.01.T01:CDS 25.0%
! AACTACATGTAACTTTCATA+CGG - Chr3:49630292-49630311 MsG0380014095.01.T01:intron 25.0%
! AAGATACCAAACCTATAAAT+TGG - Chr3:49629641-49629660 MsG0380014095.01.T01:intron 25.0%
! AAGCATGATGATAAATATAG+TGG - Chr3:49625687-49625706 MsG0380014095.01.T01:CDS 25.0%
! AAGTGATTCCAATTATCATA+TGG + Chr3:49627045-49627064 None:intergenic 25.0%
! AATGTGGGAAATTCATTTAT+CGG - Chr3:49627556-49627575 MsG0380014095.01.T01:intron 25.0%
! AATTCATTGAAAACATACCT+TGG + Chr3:49629171-49629190 None:intergenic 25.0%
! ACAATAAAGACTGAAAAAAG+AGG - Chr3:49625714-49625733 MsG0380014095.01.T01:CDS 25.0%
! ACGATAAATATAAAGGGAAA+AGG - Chr3:49625594-49625613 MsG0380014095.01.T01:CDS 25.0%
! AGTATGTGTGAATATATCAT+TGG - Chr3:49625777-49625796 MsG0380014095.01.T01:intron 25.0%
! AGTGATTCCAATTATCATAT+GGG + Chr3:49627044-49627063 None:intergenic 25.0%
! ATAATGAGAAAACAACTGTT+TGG - Chr3:49629749-49629768 MsG0380014095.01.T01:intron 25.0%
! ATAGAGAATAATTCAAATGC+AGG + Chr3:49634695-49634714 None:intergenic 25.0%
! ATCAAATACATCAACTTTCA+TGG + Chr3:49631152-49631171 None:intergenic 25.0%
! ATGAAAGGTTCAACAAAAAA+TGG - Chr3:49633443-49633462 MsG0380014095.01.T01:CDS 25.0%
! CAACTTTAATCCTACAATTT+AGG + Chr3:49628144-49628163 None:intergenic 25.0%
! CTTACTTATTGAAGTAGTTA+GGG - Chr3:49627438-49627457 MsG0380014095.01.T01:intron 25.0%
! GAATTATCAGCAAAGAAAAA+TGG - Chr3:49633593-49633612 MsG0380014095.01.T01:intron 25.0%
! GAGCATTTCAAATGAAAAAT+TGG + Chr3:49626901-49626920 None:intergenic 25.0%
! GTTAGGTAAAATCTAACTTA+CGG + Chr3:49628122-49628141 None:intergenic 25.0%
! TAAACAAGAAAATGCTTGAA+TGG + Chr3:49627715-49627734 None:intergenic 25.0%
! TAACATAAGTAACAAAAGTC+AGG + Chr3:49628594-49628613 None:intergenic 25.0%
! TAGAGTGAAACCTTAATATT+TGG - Chr3:49628565-49628584 MsG0380014095.01.T01:intron 25.0%
! TCAATATATGTTGTAGAGAA+AGG - Chr3:49630757-49630776 MsG0380014095.01.T01:intron 25.0%
! TCACGTCTCAATAATTAATA+CGG + Chr3:49631234-49631253 None:intergenic 25.0%
! TCTCAAATATGTTATGTTGA+AGG - Chr3:49627412-49627431 MsG0380014095.01.T01:intron 25.0%
! TCTCAGATATAAGCAAAAAT+TGG + Chr3:49631211-49631230 None:intergenic 25.0%
! TCTCTACAACATATATTGAT+AGG + Chr3:49630756-49630775 None:intergenic 25.0%
! TGTAATGTTGTCCAATTTAT+AGG + Chr3:49629655-49629674 None:intergenic 25.0%
! TGTCTATCTATTAGTTGATT+TGG - Chr3:49627756-49627775 MsG0380014095.01.T01:intron 25.0%
! TTAATTGTTGGATCTTTGAA+AGG + Chr3:49626256-49626275 None:intergenic 25.0%
! TTATGGCTATGTAAGTTTAA+GGG - Chr3:49627357-49627376 MsG0380014095.01.T01:intron 25.0%
! TTATTGTAGGATGTTCTATT+TGG + Chr3:49629714-49629733 None:intergenic 25.0%
! TTCTCTATATCTTCGTTAAT+TGG - Chr3:49634707-49634726 MsG0380014095.01.T01:intron 25.0%
! TTGAACCACTCAAATATTTA+TGG + Chr3:49629423-49629442 None:intergenic 25.0%
!! AAGATTTAGCAAATGAGTTT+TGG - Chr3:49630265-49630284 MsG0380014095.01.T01:intron 25.0%
!! ACCACAACTTTTTAAATCTA+TGG + Chr3:49628216-49628235 None:intergenic 25.0%
!! ACTTGTTGATAAAAGGTTAT+TGG - Chr3:49628469-49628488 MsG0380014095.01.T01:intron 25.0%
!! ATAGAATGACTACGTATTTT+AGG + Chr3:49634050-49634069 None:intergenic 25.0%
!! CTTGTTGATAAAAGGTTATT+GGG - Chr3:49628470-49628489 MsG0380014095.01.T01:intron 25.0%
!! CTTTTTGATAAGTCTATCTA+TGG - Chr3:49628364-49628383 MsG0380014095.01.T01:intron 25.0%
!! GAAAAGTGTAGTTGAAATTA+TGG - Chr3:49633496-49633515 MsG0380014095.01.T01:CDS 25.0%
!! GAGTTACTTTGAATTAAACA+TGG + Chr3:49634089-49634108 None:intergenic 25.0%
!! TAATTGTTGGATCTTTGAAA+GGG + Chr3:49626255-49626274 None:intergenic 25.0%
!! TAGAATGACTACGTATTTTA+GGG + Chr3:49634049-49634068 None:intergenic 25.0%
!! TTAATCCTACAATTTAGGTT+AGG + Chr3:49628139-49628158 None:intergenic 25.0%
!! TTTATAGGTTTGGTATCTTA+TGG + Chr3:49629640-49629659 None:intergenic 25.0%
!! TTTTACCTAACCTAAATTGT+AGG - Chr3:49628131-49628150 MsG0380014095.01.T01:CDS 25.0%
!!! AAATCTTAGAATTTGAGTTG+GGG + Chr3:49627940-49627959 None:intergenic 25.0%
!!! AAGTAAGAGATTTTAGCAAA+TGG - Chr3:49630187-49630206 MsG0380014095.01.T01:intron 25.0%
!!! TCACTTTTTGATATCCAATA+TGG + Chr3:49627263-49627282 None:intergenic 25.0%
!!! TGAGAATTTGTTGGTTATAA+AGG - Chr3:49627462-49627481 MsG0380014095.01.T01:intron 25.0%
!!! TTACTGACTTTTAAGAATCA+AGG - Chr3:49627610-49627629 MsG0380014095.01.T01:intron 25.0%
!!! TTATAAAGGTTGTTTTCATG+TGG - Chr3:49627476-49627495 MsG0380014095.01.T01:intron 25.0%
!!! TTGACTCTCTTTTTATTTGT+CGG - Chr3:49626056-49626075 MsG0380014095.01.T01:intron 25.0%
!!! TTGTAGAAGTATGAGATTTT+GGG - Chr3:49630234-49630253 MsG0380014095.01.T01:intron 25.0%
!!! TTGTGATTTTAGCAATAATC+TGG - Chr3:49631363-49631382 MsG0380014095.01.T01:intron 25.0%
!!! TTTGTAGAAGTATGAGATTT+TGG - Chr3:49630233-49630252 MsG0380014095.01.T01:intron 25.0%
AAAACATTACATAATGGCCA+TGG + Chr3:49629212-49629231 None:intergenic 30.0%
AAATACAAAAGTGGGTCATA+TGG - Chr3:49628238-49628257 MsG0380014095.01.T01:intron 30.0%
AAATGCTAACCTATGACATT+AGG - Chr3:49628808-49628827 MsG0380014095.01.T01:intron 30.0%
AATACAAAAGTGGGTCATAT+GGG - Chr3:49628239-49628258 MsG0380014095.01.T01:intron 30.0%
AATGAGATAAGAGTTGAACA+TGG - Chr3:49627860-49627879 MsG0380014095.01.T01:intron 30.0%
AATGCTAACCTATGACATTA+GGG - Chr3:49628809-49628828 MsG0380014095.01.T01:intron 30.0%
AATTTCGTATGGTTGAATGT+GGG - Chr3:49627541-49627560 MsG0380014095.01.T01:intron 30.0%
AGAAAACTAAGACTCTAGTA+TGG + Chr3:49627129-49627148 None:intergenic 30.0%
AGAGCTTAACTCAAAAGTAA+AGG - Chr3:49633520-49633539 MsG0380014095.01.T01:intron 30.0%
AGATACAAATGACACTTAGT+TGG + Chr3:49628343-49628362 None:intergenic 30.0%
AGCCAATTAGATAAGGTAAA+AGG + Chr3:49626412-49626431 None:intergenic 30.0%
ATACCCAATAGTGATGTAAT+GGG + Chr3:49630964-49630983 None:intergenic 30.0%
ATAGCAAGATTGAGATCATT+TGG + Chr3:49625921-49625940 None:intergenic 30.0%
ATAGTAGTAACATATGCGAT+TGG + Chr3:49628890-49628909 None:intergenic 30.0%
ATCATTCATACATGATTGGT+GGG - Chr3:49632008-49632027 MsG0380014095.01.T01:intron 30.0%
ATCTCCCTTGAGTAAAATAA+TGG + Chr3:49631038-49631057 None:intergenic 30.0%
ATGAACATAGCTCAATTGAA+AGG + Chr3:49631793-49631812 None:intergenic 30.0%
ATGAAGTAGATTGGAATTTG+CGG - Chr3:49627222-49627241 MsG0380014095.01.T01:intron 30.0%
ATGAATGTCTTCACTCAATT+TGG + Chr3:49629606-49629625 None:intergenic 30.0%
ATGAGATAAGAGTTGAACAT+GGG - Chr3:49627861-49627880 MsG0380014095.01.T01:intron 30.0%
ATGGTGAGTAAATAGTGTAT+TGG + Chr3:49627110-49627129 None:intergenic 30.0%
ATGTCTAATTCTAGATGTGA+GGG - Chr3:49628034-49628053 MsG0380014095.01.T01:intron 30.0%
ATTGAAGACCGAAATTCAAA+GGG - Chr3:49625825-49625844 MsG0380014095.01.T01:intron 30.0%
CAAAAATTCAACCATGTCAA+AGG - Chr3:49629504-49629523 MsG0380014095.01.T01:intron 30.0%
CAATTTAATCACCTCCTAAT+CGG + Chr3:49627161-49627180 None:intergenic 30.0%
CATATTCTATGTATTTGCAG+AGG - Chr3:49633376-49633395 MsG0380014095.01.T01:intron 30.0%
CATTTGGGAAAAAATGATGT+AGG + Chr3:49625905-49625924 None:intergenic 30.0%
CCTAACTACTTCAATAAGTA+AGG + Chr3:49627440-49627459 None:intergenic 30.0%
CCTTACTTATTGAAGTAGTT+AGG - Chr3:49627437-49627456 MsG0380014095.01.T01:intron 30.0%
CGATGAAAATGCATTACTTA+TGG - Chr3:49633721-49633740 MsG0380014095.01.T01:intron 30.0%
CTAGTTTGATATGATGTCTA+TGG - Chr3:49631316-49631335 MsG0380014095.01.T01:intron 30.0%
CTTATTACTTGTAGCAATGA+AGG - Chr3:49633559-49633578 MsG0380014095.01.T01:intron 30.0%
GAAGGAATTCAAGAAATGAA+AGG - Chr3:49633428-49633447 MsG0380014095.01.T01:CDS 30.0%
GCCATAGATTTAAAAAGTTG+TGG - Chr3:49628212-49628231 MsG0380014095.01.T01:CDS 30.0%
GTAAAGGAATCTAACAAGAA+AGG - Chr3:49633536-49633555 MsG0380014095.01.T01:intron 30.0%
GTCCAAGTAACTCTAAATAA+AGG - Chr3:49629868-49629887 MsG0380014095.01.T01:intron 30.0%
GTCTATTCTTAATTGCATGT+TGG - Chr3:49632228-49632247 MsG0380014095.01.T01:intron 30.0%
GTTAGCTAATCTAATCTAGT+AGG - Chr3:49626357-49626376 MsG0380014095.01.T01:CDS 30.0%
GTTATCTCCCATATGATAAT+TGG - Chr3:49627034-49627053 MsG0380014095.01.T01:intron 30.0%
GTTATGGCTATGTAAGTTTA+AGG - Chr3:49627356-49627375 MsG0380014095.01.T01:intron 30.0%
GTTGCTTAAACAATGCATTT+AGG + Chr3:49633120-49633139 None:intergenic 30.0%
TAATTTCGTATGGTTGAATG+TGG - Chr3:49627540-49627559 MsG0380014095.01.T01:intron 30.0%
TAGCAAGATTGAGATCATTT+GGG + Chr3:49625920-49625939 None:intergenic 30.0%
TATGGCTATGTAAGTTTAAG+GGG - Chr3:49627358-49627377 MsG0380014095.01.T01:intron 30.0%
TATGTAAGTTTAAGGGGATT+TGG - Chr3:49627364-49627383 MsG0380014095.01.T01:intron 30.0%
TCAATACCATTACACAATGT+TGG - Chr3:49630796-49630815 MsG0380014095.01.T01:intron 30.0%
TCATTGGAAAAAATGGTGAA+AGG - Chr3:49625793-49625812 MsG0380014095.01.T01:intron 30.0%
TCATTGGATATGAAGTAGAT+TGG - Chr3:49627213-49627232 MsG0380014095.01.T01:intron 30.0%
TGGATTAATTCGAGATGTTA+TGG - Chr3:49627340-49627359 MsG0380014095.01.T01:intron 30.0%
TGTAACATAAAGTCTTAGCA+CGG + Chr3:49630879-49630898 None:intergenic 30.0%
TGTGGTTGAAATACAAAAGT+GGG - Chr3:49628230-49628249 MsG0380014095.01.T01:CDS 30.0%
TGTTGTCCAATTTATAGGTT+TGG + Chr3:49629650-49629669 None:intergenic 30.0%
TTACATCACCAAGAAAAAGA+TGG - Chr3:49630938-49630957 MsG0380014095.01.T01:intron 30.0%
TTCAATTGAGCTATGTTCAT+GGG - Chr3:49631793-49631812 MsG0380014095.01.T01:intron 30.0%
TTCTCTACTTTCATCTAAAG+TGG + Chr3:49631293-49631312 None:intergenic 30.0%
TTGTGGTTGAAATACAAAAG+TGG - Chr3:49628229-49628248 MsG0380014095.01.T01:CDS 30.0%
TTTCAATTGAGCTATGTTCA+TGG - Chr3:49631792-49631811 MsG0380014095.01.T01:intron 30.0%
TTTGAATTGGGTGAAAGAAA+CGG - Chr3:49626992-49627011 MsG0380014095.01.T01:intron 30.0%
! AATCTTGCTATCAATGACTT+TGG - Chr3:49625930-49625949 MsG0380014095.01.T01:intron 30.0%
! AATTGTTGGATCTTTGAAAG+GGG + Chr3:49626254-49626273 None:intergenic 30.0%
! ATCTAGAATTAGACATCCAT+AGG + Chr3:49628030-49628049 None:intergenic 30.0%
! ATGCTTGTGATTTTGTAAGT+TGG - Chr3:49630104-49630123 MsG0380014095.01.T01:intron 30.0%
! ATGGCGATATTTTGTGTAAT+GGG + Chr3:49628197-49628216 None:intergenic 30.0%
! ATTTGTTCGCATGGATTTTT+CGG - Chr3:49628672-49628691 MsG0380014095.01.T01:intron 30.0%
! CTCCTTTATTTAGAGTTACT+TGG + Chr3:49629873-49629892 None:intergenic 30.0%
! CTTTGACATGGTTGAATTTT+TGG + Chr3:49629506-49629525 None:intergenic 30.0%
! GAATGTGCGTTATCTTTTTA+AGG - Chr3:49628712-49628731 MsG0380014095.01.T01:intron 30.0%
! GTAGTCCTTCAAAAGATTTT+GGG - Chr3:49630209-49630228 MsG0380014095.01.T01:intron 30.0%
! GTCCTTTTACCTTATCTAAT+TGG - Chr3:49626407-49626426 MsG0380014095.01.T01:CDS 30.0%
! TAGTCCTTCAAAAGATTTTG+GGG - Chr3:49630210-49630229 MsG0380014095.01.T01:intron 30.0%
! TATGGCGATATTTTGTGTAA+TGG + Chr3:49628198-49628217 None:intergenic 30.0%
! TCTAGAATTAGACATCCATA+GGG + Chr3:49628029-49628048 None:intergenic 30.0%
! TTGAATGGTCACAAGATTTT+GGG + Chr3:49627700-49627719 None:intergenic 30.0%
! TTTCTCTGTAAATACCGATT+AGG - Chr3:49627144-49627163 MsG0380014095.01.T01:intron 30.0%
! TTTGAAATGCTCAACACAAT+TGG - Chr3:49626909-49626928 MsG0380014095.01.T01:intron 30.0%
!! AGATTTTGTTGTATCCATAG+AGG + Chr3:49629831-49629850 None:intergenic 30.0%
!! CCTACCATTATTTTACTCAA+GGG - Chr3:49631031-49631050 MsG0380014095.01.T01:CDS 30.0%
!! TGTAGAAGTATGAGATTTTG+GGG - Chr3:49630235-49630254 MsG0380014095.01.T01:intron 30.0%
!! TGTTCTATTTGGTTTGGTAT+CGG + Chr3:49629703-49629722 None:intergenic 30.0%
!! TTCTAGATAAAAGCATTGAG+TGG - Chr3:49634546-49634565 MsG0380014095.01.T01:CDS 30.0%
!! TTGATTTGGATGTCAAACAA+AGG - Chr3:49627770-49627789 MsG0380014095.01.T01:intron 30.0%
!! TTTTGATAACTTCTTCCCAA+TGG + Chr3:49625548-49625567 None:intergenic 30.0%
!!! TTGAATTTTTGGTATTGTCG+TGG + Chr3:49629495-49629514 None:intergenic 30.0%
AAAAGGAACTGCATTACATG+TGG - Chr3:49625611-49625630 MsG0380014095.01.T01:CDS 35.0%
AAACCCAGGTGAAATCTTTA+AGG - Chr3:49634508-49634527 MsG0380014095.01.T01:CDS 35.0%
AAATCAACACAAGAGAGAGA+AGG - Chr3:49633410-49633429 MsG0380014095.01.T01:CDS 35.0%
AACAAGGATGAAAAAAACCC+AGG - Chr3:49634494-49634513 MsG0380014095.01.T01:CDS 35.0%
AACACGAGTGTTATAAGAGA+TGG - Chr3:49630352-49630371 MsG0380014095.01.T01:intron 35.0%
AACTTGTACCCTAATGTCAT+AGG + Chr3:49628820-49628839 None:intergenic 35.0%
AAGAAAAAATTGACAGGAGC+TGG + Chr3:49631755-49631774 None:intergenic 35.0%
AAGTAAGCTAGTGATGTCAA+AGG + Chr3:49626336-49626355 None:intergenic 35.0%
ACAAGGAACGCTATATAGTA+CGG + Chr3:49632617-49632636 None:intergenic 35.0%
ACATTAGACCTTTGTGTTGA+TGG + Chr3:49629044-49629063 None:intergenic 35.0%
ACCGAACATTTCTCTATGAA+TGG + Chr3:49625976-49625995 None:intergenic 35.0%
AGAAAAAATTGACAGGAGCT+GGG + Chr3:49631754-49631773 None:intergenic 35.0%
AGTACGGAAGAACTATAGTA+CGG + Chr3:49632601-49632620 None:intergenic 35.0%
AGTAGCTAGCCAATTAGATA+AGG + Chr3:49626419-49626438 None:intergenic 35.0%
ATACAAAAGTGGGTCATATG+GGG - Chr3:49628240-49628259 MsG0380014095.01.T01:intron 35.0%
ATACGGAATTGCGACAAATT+TGG - Chr3:49630309-49630328 MsG0380014095.01.T01:intron 35.0%
ATGACATTAGGGTACAAGTT+AGG - Chr3:49628820-49628839 MsG0380014095.01.T01:intron 35.0%
ATTTGGATGTCAAACAAAGG+TGG - Chr3:49627773-49627792 MsG0380014095.01.T01:intron 35.0%
CATACCCAATAGTGATGTAA+TGG + Chr3:49630965-49630984 None:intergenic 35.0%
CATCATTCATACATGATTGG+TGG - Chr3:49632007-49632026 MsG0380014095.01.T01:intron 35.0%
CCAATCATGTATGAATGATG+AGG + Chr3:49632007-49632026 None:intergenic 35.0%
CCCTTGAGTAAAATAATGGT+AGG + Chr3:49631034-49631053 None:intergenic 35.0%
CCTCATCATTCATACATGAT+TGG - Chr3:49632004-49632023 MsG0380014095.01.T01:intron 35.0%
CCTTATAATCGAAAACCACA+TGG - Chr3:49629545-49629564 MsG0380014095.01.T01:intron 35.0%
CGAAGATTAACCAAATTGTC+TGG + Chr3:49628443-49628462 None:intergenic 35.0%
CTAATAGCAAGAACTTCAAG+AGG + Chr3:49626721-49626740 None:intergenic 35.0%
CTAGTGATGATATTTCGACA+TGG - Chr3:49630724-49630743 MsG0380014095.01.T01:intron 35.0%
GAAGATGATTACAACCAAGA+TGG - Chr3:49625408-49625427 MsG0380014095.01.T01:CDS 35.0%
GATGCTTAAACAATGCTCTA+AGG - Chr3:49633231-49633250 MsG0380014095.01.T01:intron 35.0%
GATGTCTAATTCTAGATGTG+AGG - Chr3:49628033-49628052 MsG0380014095.01.T01:intron 35.0%
GATTCACCAACATTGTGTAA+TGG + Chr3:49630805-49630824 None:intergenic 35.0%
GATTGAAGACCGAAATTCAA+AGG - Chr3:49625824-49625843 MsG0380014095.01.T01:intron 35.0%
GCCATTCATAGAGAAATGTT+CGG - Chr3:49625972-49625991 MsG0380014095.01.T01:intron 35.0%
GCGTGTTAATAAATCTTTGC+AGG - Chr3:49631486-49631505 MsG0380014095.01.T01:intron 35.0%
GGTGGAAAAGTTCTTCTTTA+TGG - Chr3:49628737-49628756 MsG0380014095.01.T01:intron 35.0%
GGTTAAGCAGATCTCAAATT+AGG - Chr3:49627794-49627813 MsG0380014095.01.T01:intron 35.0%
GGTTTCACTCTATACATTCA+AGG + Chr3:49628557-49628576 None:intergenic 35.0%
GTAGGATGTTCTATTTGGTT+TGG + Chr3:49629709-49629728 None:intergenic 35.0%
GTCATGTTAACTAGTGTTCT+GGG - Chr3:49628492-49628511 MsG0380014095.01.T01:intron 35.0%
GTGTTTCTCCCTTTGAATTT+CGG + Chr3:49625836-49625855 None:intergenic 35.0%
GTTAAGAAGAACCACATGTA+TGG - Chr3:49631950-49631969 MsG0380014095.01.T01:intron 35.0%
GTTATGTGTCATGCAAAGTT+TGG - Chr3:49630142-49630161 MsG0380014095.01.T01:intron 35.0%
TACAATCTCACTACCATACT+TGG + Chr3:49628407-49628426 None:intergenic 35.0%
TACGGAATTGCGACAAATTT+GGG - Chr3:49630310-49630329 MsG0380014095.01.T01:intron 35.0%
TATGGGAGATAACTGAGAAA+AGG + Chr3:49627027-49627046 None:intergenic 35.0%
TCATTCATACATGATTGGTG+GGG - Chr3:49632009-49632028 MsG0380014095.01.T01:intron 35.0%
TCTTGGTTGTAATCATCTTC+AGG + Chr3:49625408-49625427 None:intergenic 35.0%
TGCACAAAGCAAAAGAGTAA+TGG + Chr3:49631870-49631889 None:intergenic 35.0%
TGCGATTGGAAGAAAAAAAG+TGG + Chr3:49628876-49628895 None:intergenic 35.0%
TGGTTACGATGCTTCTAAAT+TGG - Chr3:49629565-49629584 MsG0380014095.01.T01:intron 35.0%
TGTAAACATGATACGCCATT+TGG + Chr3:49630923-49630942 None:intergenic 35.0%
TGTCTAATTCTAGATGTGAG+GGG - Chr3:49628035-49628054 MsG0380014095.01.T01:intron 35.0%
TTACCATCATAGAACCAACA+AGG - Chr3:49634478-49634497 MsG0380014095.01.T01:CDS 35.0%
TTTATGTCAACGTTGAGAGT+TGG - Chr3:49627505-49627524 MsG0380014095.01.T01:intron 35.0%
TTTGTTGAGTCACTTCTATC+CGG - Chr3:49627978-49627997 MsG0380014095.01.T01:intron 35.0%
! AAGGTGTTTCTGTCAAAGTA+TGG - Chr3:49629086-49629105 MsG0380014095.01.T01:intron 35.0%
! AGATTTTAGACGTACCATCT+TGG + Chr3:49625425-49625444 None:intergenic 35.0%
! AGGTGTTTCTGTCAAAGTAT+GGG - Chr3:49629087-49629106 MsG0380014095.01.T01:intron 35.0%
! ATGATGATGCGAATGATGTT+AGG + Chr3:49629988-49630007 None:intergenic 35.0%
! ATGTATTGACATGTGTGAAG+AGG + Chr3:49632288-49632307 None:intergenic 35.0%
! CAAACCCCAAAATCTTTTGA+AGG + Chr3:49630217-49630236 None:intergenic 35.0%
! CAATGTTGGTGAATCAGAAA+AGG - Chr3:49630810-49630829 MsG0380014095.01.T01:intron 35.0%
! CATCGTTAGAGTTAGTTTCA+TGG + Chr3:49633706-49633725 None:intergenic 35.0%
! CATTTTGTCATGCAGTCTAT+TGG - Chr3:49631667-49631686 MsG0380014095.01.T01:intron 35.0%
! CCATGTGGTTTTCGATTATA+AGG + Chr3:49629548-49629567 None:intergenic 35.0%
! CTAGATTTTGTACTCCTCTA+TGG - Chr3:49629814-49629833 MsG0380014095.01.T01:intron 35.0%
! CTTGAATGGTCACAAGATTT+TGG + Chr3:49627701-49627720 None:intergenic 35.0%
! GAGTAAATAGTGTATTGGCA+CGG + Chr3:49627105-49627124 None:intergenic 35.0%
! GGTAAAGAAAGGTCCTTTTA+TGG + Chr3:49625884-49625903 None:intergenic 35.0%
! GGTAGTCCTTCAAAAGATTT+TGG - Chr3:49630208-49630227 MsG0380014095.01.T01:intron 35.0%
! TGGCGATATTTTGTGTAATG+GGG + Chr3:49628196-49628215 None:intergenic 35.0%
! TTTGACATCACTAGCTTACT+TGG - Chr3:49626335-49626354 MsG0380014095.01.T01:CDS 35.0%
!! AAACAATGCTCTAAGGACTA+AGG - Chr3:49633238-49633257 MsG0380014095.01.T01:intron 35.0%
!! AACAATGCTCTAAGGACTAA+GGG - Chr3:49633239-49633258 MsG0380014095.01.T01:intron 35.0%
!! ACTCGTCTCCTTGTTTATTT+TGG + Chr3:49630057-49630076 None:intergenic 35.0%
!! ATGGATTTTTCGGTTCATCT+AGG - Chr3:49628682-49628701 MsG0380014095.01.T01:intron 35.0%
!! ATTTTTCCGTTGGTTGTTGA+AGG - Chr3:49627311-49627330 MsG0380014095.01.T01:intron 35.0%
!! CTCTTGAAGTTCTTGCTATT+AGG - Chr3:49626719-49626738 MsG0380014095.01.T01:CDS 35.0%
!! GCCTACCATTATTTTACTCA+AGG - Chr3:49631030-49631049 MsG0380014095.01.T01:CDS 35.0%
!! TCGACTCTTGAAAGCATTTA+TGG - Chr3:49631976-49631995 MsG0380014095.01.T01:intron 35.0%
!! TGTTGGTTCTATGATGGTAA+TGG + Chr3:49634478-49634497 None:intergenic 35.0%
!!! CGTTATCTTTTTAAGGTTGG+TGG - Chr3:49628719-49628738 MsG0380014095.01.T01:intron 35.0%
!!! GTGCGTTATCTTTTTAAGGT+TGG - Chr3:49628716-49628735 MsG0380014095.01.T01:intron 35.0%
!!! TGGGTTTTTTTCATCCTTGT+TGG + Chr3:49634495-49634514 None:intergenic 35.0%
AAATGATGTGGGACATCAAG+TGG - Chr3:49633921-49633940 MsG0380014095.01.T01:intron 40.0%
AACACAACGAAAACACTGCT+TGG - Chr3:49633876-49633895 MsG0380014095.01.T01:intron 40.0%
AACCAAATTGTCTGGCATCT+AGG + Chr3:49628435-49628454 None:intergenic 40.0%
AACCTAGATGCCAGACAATT+TGG - Chr3:49628430-49628449 MsG0380014095.01.T01:intron 40.0%
AAGGGAAAAGCTTCTTGGTA+CGG - Chr3:49632451-49632470 MsG0380014095.01.T01:intron 40.0%
AATCTCACTACCATACTTGG+CGG + Chr3:49628404-49628423 None:intergenic 40.0%
AGGAATCTCGCTTAAATCAC+AGG - Chr3:49631506-49631525 MsG0380014095.01.T01:intron 40.0%
AGTCAGGGAGCCAAATATTA+AGG + Chr3:49628578-49628597 None:intergenic 40.0%
AGTTAGGGCTGAGAATTTGT+TGG - Chr3:49627453-49627472 MsG0380014095.01.T01:intron 40.0%
ATCATGTTCACCCTTTGACA+TGG + Chr3:49629518-49629537 None:intergenic 40.0%
ATGGCCCATTACATCACTAT+TGG - Chr3:49630957-49630976 MsG0380014095.01.T01:intron 40.0%
ATGTGTCATGCAAAGTTTGG+TGG - Chr3:49630145-49630164 MsG0380014095.01.T01:intron 40.0%
ATTACATAATGGCCATGGCT+AGG + Chr3:49629207-49629226 None:intergenic 40.0%
ATTATCAAGCGCAAACTGGA+TGG - Chr3:49632082-49632101 MsG0380014095.01.T01:intron 40.0%
CAATTTGGTTAGTATCCACG+TGG + Chr3:49629591-49629610 None:intergenic 40.0%
CCTAAACCTTCAACAACCAA+CGG + Chr3:49627320-49627339 None:intergenic 40.0%
CCTCCTTAAAGATTTCACCT+GGG + Chr3:49634514-49634533 None:intergenic 40.0%
CTAACAAGGGAAAAGCTTCT+TGG - Chr3:49632446-49632465 MsG0380014095.01.T01:intron 40.0%
CTCCACCTCCAAAATAAACA+AGG - Chr3:49630046-49630065 MsG0380014095.01.T01:intron 40.0%
CTGTAAGTGACACACACATA+TGG - Chr3:49626798-49626817 MsG0380014095.01.T01:intron 40.0%
GAAAAAATTGACAGGAGCTG+GGG + Chr3:49631753-49631772 None:intergenic 40.0%
GGTCATGTTAACTAGTGTTC+TGG - Chr3:49628491-49628510 MsG0380014095.01.T01:intron 40.0%
GTACGGAAGAACTATAGTAC+GGG + Chr3:49632600-49632619 None:intergenic 40.0%
TATTTGCGTGCAGCAAAACA+TGG - Chr3:49633632-49633651 MsG0380014095.01.T01:intron 40.0%
TCAGGAAAACCAACATTCCA+AGG - Chr3:49634665-49634684 MsG0380014095.01.T01:intron 40.0%
TCCTCCTTAAAGATTTCACC+TGG + Chr3:49634515-49634534 None:intergenic 40.0%
TCTAGCATCTCATTAGTGTG+TGG + Chr3:49629799-49629818 None:intergenic 40.0%
TGAATCCTCTATATGCTGCA+AGG + Chr3:49625755-49625774 None:intergenic 40.0%
TGACATTATCAAGCGCAAAC+TGG - Chr3:49632078-49632097 MsG0380014095.01.T01:intron 40.0%
TGGCCCATTACATCACTATT+GGG - Chr3:49630958-49630977 MsG0380014095.01.T01:intron 40.0%
TTCAAGCGCACACATGATTT+CGG + Chr3:49633663-49633682 None:intergenic 40.0%
TTCGAGAAGTGAGTATAGCA+AGG + Chr3:49634766-49634785 None:intergenic 40.0%
TTCGGTTCATCTAGGAATCA+TGG - Chr3:49628690-49628709 MsG0380014095.01.T01:intron 40.0%
TTGAAAGGGGATAGGATCAT+AGG + Chr3:49626241-49626260 None:intergenic 40.0%
TTGGTTGTTGAAGGTTTAGG+TGG - Chr3:49627320-49627339 MsG0380014095.01.T01:intron 40.0%
! AAAGTTTGGTGGTTAGTGGT+TGG - Chr3:49630156-49630175 MsG0380014095.01.T01:intron 40.0%
! AACGAAGGTATATAAGCCGT+AGG - Chr3:49632494-49632513 MsG0380014095.01.T01:intron 40.0%
! AAGTTTGGTGGTTAGTGGTT+GGG - Chr3:49630157-49630176 MsG0380014095.01.T01:intron 40.0%
! ACGTTTTGCAATGTCTTCGT+TGG + Chr3:49625649-49625668 None:intergenic 40.0%
! ATGCAAAGTTTGGTGGTTAG+TGG - Chr3:49630152-49630171 MsG0380014095.01.T01:intron 40.0%
! CATCTAGCAATTTGTTCGCA+TGG - Chr3:49628663-49628682 MsG0380014095.01.T01:intron 40.0%
! CATTTCTTTTCCTTCTGTGC+TGG + Chr3:49631399-49631418 None:intergenic 40.0%
! CTCTGTAAATACCGATTAGG+AGG - Chr3:49627147-49627166 MsG0380014095.01.T01:intron 40.0%
! GACACTTAGTTGGTACTAGT+AGG + Chr3:49628333-49628352 None:intergenic 40.0%
! GGCGATATTTTGTGTAATGG+GGG + Chr3:49628195-49628214 None:intergenic 40.0%
! TAAATAGTGTATTGGCACGG+TGG + Chr3:49627102-49627121 None:intergenic 40.0%
! TATGTTATTTGAGGGTCGCA+AGG - Chr3:49628607-49628626 MsG0380014095.01.T01:intron 40.0%
! TTGGATCTTTGAAAGGGGAT+AGG + Chr3:49626249-49626268 None:intergenic 40.0%
!! CATCCTTGTTGGTTCTATGA+TGG + Chr3:49634484-49634503 None:intergenic 40.0%
!! GCGATATTTTGTGTAATGGG+GGG + Chr3:49628194-49628213 None:intergenic 40.0%
!! GTATTTTGGGAGAGACTCTT+GGG - Chr3:49627632-49627651 MsG0380014095.01.T01:intron 40.0%
!! GTTCTATGATGGTAATGGTC+TGG + Chr3:49634473-49634492 None:intergenic 40.0%
!! TTAGAAGCATCGTAACCATG+TGG + Chr3:49629563-49629582 None:intergenic 40.0%
!! TTTGATGACGTTGAAGACCA+AGG - Chr3:49629151-49629170 MsG0380014095.01.T01:intron 40.0%
!!! ACCTTTGTGTTGATGGCTTT+TGG + Chr3:49629037-49629056 None:intergenic 40.0%
!!! CGTCTCCTTGTTTATTTTGG+AGG + Chr3:49630054-49630073 None:intergenic 40.0%
!!! CTCCTTGTTTATTTTGGAGG+TGG + Chr3:49630051-49630070 None:intergenic 40.0%
!!! CTTTTGTTTTCCAGCACAGA+AGG - Chr3:49631386-49631405 MsG0380014095.01.T01:intron 40.0%
!!! GTAATGGGCCATCTTTTTCT+TGG + Chr3:49630949-49630968 None:intergenic 40.0%
AAACACACAATGCATGCGGA+CGG + Chr3:49632577-49632596 None:intergenic 45.0%
AAGCTTCTTGGTACGGCAAT+TGG - Chr3:49632458-49632477 MsG0380014095.01.T01:intron 45.0%
AAGGAACATGATGAGTGCAG+TGG + Chr3:49634747-49634766 None:intergenic 45.0%
AATTCTAGATGTGAGGGGTG+TGG - Chr3:49628040-49628059 MsG0380014095.01.T01:intron 45.0%
ACTCTTACGATACCTAGCCA+TGG - Chr3:49629192-49629211 MsG0380014095.01.T01:intron 45.0%
AGAGTCGATCACCATACATG+TGG + Chr3:49631964-49631983 None:intergenic 45.0%
AGAGTGGAAATCAGCTGTCA+TGG - Chr3:49626755-49626774 MsG0380014095.01.T01:CDS 45.0%
AGGACATCAGCTTTCAAGAG+TGG - Chr3:49626739-49626758 MsG0380014095.01.T01:CDS 45.0%
ATCTGTGTGTCTTGTGCAAC+AGG - Chr3:49626628-49626647 MsG0380014095.01.T01:CDS 45.0%
ATGCTTCTAAATTGGCCACG+TGG - Chr3:49629573-49629592 MsG0380014095.01.T01:intron 45.0%
ATTCAAATGCAGGCTGTCCT+TGG + Chr3:49634685-49634704 None:intergenic 45.0%
ATTTGAGGGTCGCAAGGTAA+GGG - Chr3:49628613-49628632 MsG0380014095.01.T01:intron 45.0%
CACAACTCCTCAACAACTTG+CGG + Chr3:49633764-49633783 None:intergenic 45.0%
CTATATGCTGCAAGGTGAAG+AGG + Chr3:49625747-49625766 None:intergenic 45.0%
CTCTATGAATGGCAACGTGA+AGG + Chr3:49625965-49625984 None:intergenic 45.0%
CTTCACCTTGCAGCATATAG+AGG - Chr3:49625747-49625766 MsG0380014095.01.T01:intron 45.0%
GATGTCCCACATCATTTGCA+TGG + Chr3:49633918-49633937 None:intergenic 45.0%
GCAAGCACAGCACAAAAAAG+TGG + Chr3:49625858-49625877 None:intergenic 45.0%
GCAAGTTGTTGAGGAGTTGT+GGG - Chr3:49633763-49633782 MsG0380014095.01.T01:intron 45.0%
GCCAAAAGCCATCAACACAA+AGG - Chr3:49629033-49629052 MsG0380014095.01.T01:intron 45.0%
GGAGCAACGAAAAACAACGA+AGG - Chr3:49632479-49632498 MsG0380014095.01.T01:intron 45.0%
GGAGCTTGTGAAGGATTGTA+TGG + Chr3:49630030-49630049 None:intergenic 45.0%
TAAGCTCGGGAGAAACTCTT+GGG - Chr3:49627657-49627676 MsG0380014095.01.T01:intron 45.0%
TAGACAACCGCAAGTTGTTG+AGG - Chr3:49633754-49633773 MsG0380014095.01.T01:intron 45.0%
TATGTAGTTGGCGAGTTCTG+CGG - Chr3:49625507-49625526 MsG0380014095.01.T01:CDS 45.0%
TATTTGAGGGTCGCAAGGTA+AGG - Chr3:49628612-49628631 MsG0380014095.01.T01:intron 45.0%
TCAGGCTGAATCCTAGAACT+AGG + Chr3:49625390-49625409 None:intergenic 45.0%
TCCTCCATAGAGCGAAAAAC+CGG + Chr3:49626682-49626701 None:intergenic 45.0%
TGTGTCTTGTGCAACAGGTA+TGG - Chr3:49626633-49626652 MsG0380014095.01.T01:CDS 45.0%
! ATTCTAGATGTGAGGGGTGT+GGG - Chr3:49628041-49628060 MsG0380014095.01.T01:intron 45.0%
! ATTCTCACCGGTGTCAACTT+GGG - Chr3:49626574-49626593 MsG0380014095.01.T01:CDS 45.0%
! CCCAGGTGAAATCTTTAAGG+AGG - Chr3:49634511-49634530 MsG0380014095.01.T01:CDS 45.0%
! CCGTTGGTTGTTGAAGGTTT+AGG - Chr3:49627317-49627336 MsG0380014095.01.T01:intron 45.0%
! GTATCCGGTTTTTCGCTCTA+TGG - Chr3:49626675-49626694 MsG0380014095.01.T01:CDS 45.0%
! GTTGGTGAATCAGAAAAGGC+AGG - Chr3:49630814-49630833 MsG0380014095.01.T01:intron 45.0%
!! GGTATTTTGGGAGAGACTCT+TGG - Chr3:49627631-49627650 MsG0380014095.01.T01:intron 45.0%
!! AATGATTAATAATTTAAATT+TGG + Chr3:49632923-49632942 None:intergenic 5.0%
!! AGATATAAAAAAAAAAAAAT+AGG + Chr3:49633281-49633300 None:intergenic 5.0%
!!! AAATTATCAAAATTTTATTA+AGG + Chr3:49633046-49633065 None:intergenic 5.0%
!!! TAATGTTTTTTATAAAATTT+TGG - Chr3:49629058-49629077 MsG0380014095.01.T01:intron 5.0%
!!! TCTTTTTTTTTTTTTTTTTA+TGG - Chr3:49629931-49629950 MsG0380014095.01.T01:intron 5.0%
!!! TTTATTATAATTTTTCATTT+TGG + Chr3:49629384-49629403 None:intergenic 5.0%
!!! TTTTTTTTTTGTAAATAAAT+TGG - Chr3:49629258-49629277 MsG0380014095.01.T01:intron 5.0%
AACACTGCTTGGAGCATAGC+TGG - Chr3:49633887-49633906 MsG0380014095.01.T01:intron 50.0%
AAGCTCGGGAGAAACTCTTG+GGG - Chr3:49627658-49627677 MsG0380014095.01.T01:intron 50.0%
AGACTCTTGGGACTAAGCTC+GGG - Chr3:49627644-49627663 MsG0380014095.01.T01:intron 50.0%
ATGTAGTTGGCGAGTTCTGC+GGG - Chr3:49625508-49625527 MsG0380014095.01.T01:CDS 50.0%
CAAGAGGAGAGACTCCATCT+TGG + Chr3:49626705-49626724 None:intergenic 50.0%
CATCCATAGGGTGACCTTAG+TGG + Chr3:49628017-49628036 None:intergenic 50.0%
CGCAAGTTGTTGAGGAGTTG+TGG - Chr3:49633762-49633781 MsG0380014095.01.T01:intron 50.0%
CGGGAAACACACAATGCATG+CGG + Chr3:49632581-49632600 None:intergenic 50.0%
CTAAGCTCGGGAGAAACTCT+TGG - Chr3:49627656-49627675 MsG0380014095.01.T01:intron 50.0%
CTGTGCTTGCACGCCATAAA+AGG - Chr3:49625868-49625887 MsG0380014095.01.T01:intron 50.0%
GAGACTCTTGGGACTAAGCT+CGG - Chr3:49627643-49627662 MsG0380014095.01.T01:intron 50.0%
GGTCATATGGGGTACAAAGG+AGG - Chr3:49628251-49628270 MsG0380014095.01.T01:intron 50.0%
GTGGGACATCAAGTGGTACA+AGG - Chr3:49633928-49633947 MsG0380014095.01.T01:intron 50.0%
GTGGGTCATATGGGGTACAA+AGG - Chr3:49628248-49628267 MsG0380014095.01.T01:intron 50.0%
GTTGTGGGAGAGGCTTTCTA+TGG - Chr3:49633778-49633797 MsG0380014095.01.T01:intron 50.0%
GTTTCACTGTCGAGCCACTA+AGG - Chr3:49628000-49628019 MsG0380014095.01.T01:intron 50.0%
TAGTGGCTCGACAGTGAAAC+CGG + Chr3:49628000-49628019 None:intergenic 50.0%
TGCGGCCATGCAAATGATGT+GGG - Chr3:49633910-49633929 MsG0380014095.01.T01:intron 50.0%
TTGTTGAGGAGTTGTGGGAG+AGG - Chr3:49633768-49633787 MsG0380014095.01.T01:intron 50.0%
TTTGGAGGTGGAGCTTGTGA+AGG + Chr3:49630039-49630058 None:intergenic 50.0%
! CTGATTCGTCATTCCCTCCA+GGG + Chr3:49634649-49634668 None:intergenic 50.0%
! GATTCTCACCGGTGTCAACT+TGG - Chr3:49626573-49626592 MsG0380014095.01.T01:CDS 50.0%
! TCCGGTTTTTCGCTCTATGG+AGG - Chr3:49626678-49626697 MsG0380014095.01.T01:CDS 50.0%
! TTGGTGGTTAGTGGTTGGGT+TGG - Chr3:49630161-49630180 MsG0380014095.01.T01:intron 50.0%
!! GTGGGTAGTGGAAGACCATT+GGG - Chr3:49625530-49625549 MsG0380014095.01.T01:CDS 50.0%
!! TCAGTGTTGACCGCCAAGTA+TGG - Chr3:49628391-49628410 MsG0380014095.01.T01:intron 50.0%
AGCTCGGGAGAAACTCTTGG+GGG - Chr3:49627659-49627678 MsG0380014095.01.T01:intron 55.0%
CCTCGAGGTTCGATTCTCAC+CGG - Chr3:49626562-49626581 MsG0380014095.01.T01:CDS 55.0%
CCTGGAGGGAATGACGAATC+AGG - Chr3:49634647-49634666 MsG0380014095.01.T01:CDS 55.0%
CGCTCTATGGAGGACCAAGA+TGG - Chr3:49626688-49626707 MsG0380014095.01.T01:CDS 55.0%
GACGCTGCCTGATGTAGCAA+AGG + Chr3:49634627-49634646 None:intergenic 55.0%
GAGCCACTAAGGTCACCCTA+TGG - Chr3:49628011-49628030 MsG0380014095.01.T01:intron 55.0%
GCAGGCTGTCCTTGGAATGT+TGG + Chr3:49634677-49634696 None:intergenic 55.0%
GGCGTCTCCTTTGCTACATC+AGG - Chr3:49634617-49634636 MsG0380014095.01.T01:CDS 55.0%
GTGAGAATCGAACCTCGAGG+AGG + Chr3:49626562-49626581 None:intergenic 55.0%
GTGCGGCCATGCAAATGATG+TGG - Chr3:49633909-49633928 MsG0380014095.01.T01:intron 55.0%
TCTGAGTGTACTCCTCCTCG+AGG - Chr3:49626547-49626566 MsG0380014095.01.T01:CDS 55.0%
TGCTTGGAGCATAGCTGGTG+CGG - Chr3:49633892-49633911 MsG0380014095.01.T01:intron 55.0%
! CCTGATTCGTCATTCCCTCC+AGG + Chr3:49634650-49634669 None:intergenic 55.0%
! TAGCCCACCCAAGTTGACAC+CGG + Chr3:49626584-49626603 None:intergenic 55.0%
! TCACCGGTGTCAACTTGGGT+GGG - Chr3:49626578-49626597 MsG0380014095.01.T01:CDS 55.0%
!! GGTGGGTAGTGGAAGACCAT+TGG - Chr3:49625529-49625548 MsG0380014095.01.T01:CDS 55.0%
AGTTGGCGAGTTCTGCGGGT+GGG - Chr3:49625512-49625531 MsG0380014095.01.T01:CDS 60.0%
CCGGTGAGAATCGAACCTCG+AGG + Chr3:49626565-49626584 None:intergenic 60.0%
GTTGTAGCAGCACTCGTCGC+AGG - Chr3:49634596-49634615 MsG0380014095.01.T01:CDS 60.0%
TAGTTGGCGAGTTCTGCGGG+TGG - Chr3:49625511-49625530 MsG0380014095.01.T01:CDS 60.0%
! CTCACCGGTGTCAACTTGGG+TGG - Chr3:49626577-49626596 MsG0380014095.01.T01:CDS 60.0%
ACATCAGGCAGCGTCCCTGG+AGG - Chr3:49634632-49634651 MsG0380014095.01.T01:CDS 65.0%
CATCAGGCAGCGTCCCTGGA+GGG - Chr3:49634633-49634652 MsG0380014095.01.T01:CDS 65.0%
CGAGTTCTGCGGGTGGGTAG+TGG - Chr3:49625518-49625537 MsG0380014095.01.T01:CDS 65.0%
GCTACATCAGGCAGCGTCCC+TGG - Chr3:49634629-49634648 MsG0380014095.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 49625381 49634805 49625381 ID=MsG0380014095.01;Name=MsG0380014095.01
Chr3 mRNA 49625381 49634805 49625381 ID=MsG0380014095.01.T01;Parent=MsG0380014095.01;Name=MsG0380014095.01.T01;_AED=0.16;_eAED=0.16;_QI=0|0|0|1|1|1|7|0|614
Chr3 exon 49634757 49634805 49634757 ID=MsG0380014095.01.T01:exon:9073;Parent=MsG0380014095.01.T01
Chr3 exon 49634193 49634672 49634193 ID=MsG0380014095.01.T01:exon:9072;Parent=MsG0380014095.01.T01
Chr3 exon 49633387 49633536 49633387 ID=MsG0380014095.01.T01:exon:9071;Parent=MsG0380014095.01.T01
Chr3 exon 49631014 49631097 49631014 ID=MsG0380014095.01.T01:exon:9070;Parent=MsG0380014095.01.T01
Chr3 exon 49628083 49628256 49628083 ID=MsG0380014095.01.T01:exon:9069;Parent=MsG0380014095.01.T01
Chr3 exon 49626237 49626790 49626237 ID=MsG0380014095.01.T01:exon:9068;Parent=MsG0380014095.01.T01
Chr3 exon 49625381 49625734 49625381 ID=MsG0380014095.01.T01:exon:9067;Parent=MsG0380014095.01.T01
Chr3 CDS 49634757 49634805 49634757 ID=MsG0380014095.01.T01:cds;Parent=MsG0380014095.01.T01
Chr3 CDS 49634193 49634672 49634193 ID=MsG0380014095.01.T01:cds;Parent=MsG0380014095.01.T01
Chr3 CDS 49633387 49633536 49633387 ID=MsG0380014095.01.T01:cds;Parent=MsG0380014095.01.T01
Chr3 CDS 49631014 49631097 49631014 ID=MsG0380014095.01.T01:cds;Parent=MsG0380014095.01.T01
Chr3 CDS 49628083 49628256 49628083 ID=MsG0380014095.01.T01:cds;Parent=MsG0380014095.01.T01
Chr3 CDS 49626237 49626790 49626237 ID=MsG0380014095.01.T01:cds;Parent=MsG0380014095.01.T01
Chr3 CDS 49625381 49625734 49625381 ID=MsG0380014095.01.T01:cds;Parent=MsG0380014095.01.T01
Gene Sequence

>MsG0380014095.01.T01

ATGATTCCTAGTTCTAGGATTCAGCCTGAAGATGATTACAACCAAGATGTTGGCGAGTTCTGCGGGTGGGTAGTGGAAGACCATTGGGAAGAAGTTATCAAAAAATACGAAGAAGATGTATTTTTTCACACGATAAATATAAAGGGAAAAGGAACTGCATTACATGTGGCAATAAGCAATGCCAACGAAGACATTGCAAAACGTCTTGTTGATGCAATAGTAAAGCATGATGATAAATATAGTGGTTTAACAATAAAGACTGAAAAAAGAGGTGACACTCCTCTTCACCTTGCAGCATATAGAGGATTCAAAAGTATGTGTGAATATATCATTGGAAAAAATGGTGAAAGGAAGAATTTGATTGAAGACCGAAATTCAAAGGGAGAAACACCACTTTTTTGTGCTGTGCTTGCACGCCATAAAAGGACCTTTCTTTACCTACATCATTTTTTCCCAAATGATCTCAATCTTGCTATCAATGACTTTGGTGATAACATCCTTCACGTTGCCATTCATAGAGAAATGTTCGGTATGGCAGATATAATAATTCATTTGTATCCGGTTTTTCGCTCTATGGAGGACCAAGATGGAGTCTCTCCTCTTGAAGTTCTTGCTATTAGGACATCAGCTTTCAAGAGTGGAAATCAGCTGTCATGGCTAAAGAAAATTTTGTACAACTGTGTTTCTGTCAAAGTATGGGATGCAAAAACTAGAATTAAATTCTATACGAAGGGTCTTATGTTTGATGACGTTGAAGACCAAGACATAAGAGCAATAAAGAGTGTTAAGAAGAACCACATGTATGGTGATCGACTCTTGAAAGCATTTATGGAAAATCCTCATCATTCATACATGATTGGTGGGGTAACTCCCTTTGATAAAGAAGAAATGAAAGAGAAAGCTATGAGTTTTGACATTATCAAGCGCAAACTGGATGAGGATTCAAAAAATAAATCAACACAAGAGAGAGAAGGAATTCAAGAAATGAAAGGTTCAACAAAAAATGGTGAAAAAGATAAGACATTTTTGGCAGTAGCGAAAAGTGTAGTTGAAATTATGGAAGAGCTTAACTCAAAAGTAAAGGAATCTAACAAGAAAGGCTTATTACTTGTAGCAATGAAGGATATTGCATCAGAATTATCAGCAAAGAAAAATGGCATAGATGATACAGCATATTTGCGTGCAGCAAAACATGGCATAACCGAAATCATGTGTGCGCTTGAATCTAAAATAAAAAGTGTCATCCATGAAACTAACTCTAACGATGAAAATGCATTACTTATGGCAGTGAAGAATAGACAACCGCAAGTTGTTGAGGAGTTGTGGGAGAGGCTTTCTATGGAAACTTTTCACAGCATAAATCAACAAGTTGATGTCAATGAAAACACAATTTTACACTTAGCAGCATATACAACAAAACACAACGAAAACACTGCTTGGAGCATAGCTGGTGCGGCCATGCAAATGATGTGGGACATCAAGTGGTACAAGTACATTAAAAAACTAGTACCAGACCATTACCATCATAGAACCAACAAGGATGAAAAAAACCCAGGTGAAATCTTTAAGGAGGAACACAAAGAGCTTCTAGATAAAAGCATTGAGTGGTTGAAAGACACATCAGAGTCATGCTCAGTTGTAGCAGCACTCGTCGCAGGCGTCTCCTTTGCTACATCAGGCAGCGTCCCTGGAGGGAATGACGAATCAGGAAAACCAACATTCCAAGGACAGCCTGCATTTGAATTATTCTCTATATCTTCGTTAATTGGACTTTACTTCTCTGCCACTGCACTCATCATGTTCCTTGCTATACTCACTTCTCGAAAAAGTCGAAGACTTCAATAG
Protein sequence

>MsG0380014095.01.T01

MIPSSRIQPEDDYNQDVGEFCGWVVEDHWEEVIKKYEEDVFFHTINIKGKGTALHVAISNANEDIAKRLVDAIVKHDDKYSGLTIKTEKRGDTPLHLAAYRGFKSMCEYIIGKNGERKNLIEDRNSKGETPLFCAVLARHKRTFLYLHHFFPNDLNLAINDFGDNILHVAIHREMFGMADIIIHLYPVFRSMEDQDGVSPLEVLAIRTSAFKSGNQLSWLKKILYNCVSVKVWDAKTRIKFYTKGLMFDDVEDQDIRAIKSVKKNHMYGDRLLKAFMENPHHSYMIGGVTPFDKEEMKEKAMSFDIIKRKLDEDSKNKSTQEREGIQEMKGSTKNGEKDKTFLAVAKSVVEIMEELNSKVKESNKKGLLLVAMKDIASELSAKKNGIDDTAYLRAAKHGITEIMCALESKIKSVIHETNSNDENALLMAVKNRQPQVVEELWERLSMETFHSINQQVDVNENTILHLAAYTTKHNENTAWSIAGAAMQMMWDIKWYKYIKKLVPDHYHHRTNKDEKNPGEIFKEEHKELLDKSIEWLKDTSESCSVVAALVAGVSFATSGSVPGGNDESGKPTFQGQPAFELFSISSLIGLYFSATALIMFLAILTSRKSRRLQ*