Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000241.01.T01 | XP_003589223.1 | 90.323 | 124 | 12 | 0 | 1 | 124 | 1 | 124 | 6.65E-75 | 232 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000241.01.T01 | G7I4F7 | 90.323 | 124 | 12 | 0 | 1 | 124 | 1 | 124 | 3.17e-75 | 232 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048463.01 | MsG0180000241.01 | 0.819778 | 9.712342e-53 | 7.545540e-50 |
MsG0080048464.01 | MsG0180000241.01 | 0.838020 | 3.685313e-57 | 4.874037e-54 |
MsG0080048515.01 | MsG0180000241.01 | 0.802165 | 6.383748e-49 | 3.105441e-46 |
MsG0080048660.01 | MsG0180000241.01 | 0.836442 | 9.336662e-57 | 1.176783e-53 |
MsG0080048838.01 | MsG0180000241.01 | 0.810281 | 1.246440e-50 | 7.481987e-48 |
MsG0080049002.01 | MsG0180000241.01 | 0.832511 | 9.064737e-56 | 1.015424e-52 |
MsG0180000114.01 | MsG0180000241.01 | 0.841687 | 4.084942e-58 | 6.048517e-55 |
MsG0180000218.01 | MsG0180000241.01 | -0.807618 | 4.628914e-50 | 2.590277e-47 |
MsG0180000241.01 | MsG0180000251.01 | 0.823814 | 1.131111e-53 | 9.844127e-51 |
MsG0180000241.01 | MsG0180000470.01 | 0.805279 | 1.441531e-49 | 7.595053e-47 |
MsG0180000241.01 | MsG0180000599.01 | 0.801995 | 6.920944e-49 | 3.352091e-46 |
MsG0180000241.01 | MsG0180000627.01 | 0.842969 | 1.868517e-58 | 2.880260e-55 |
MsG0180000241.01 | MsG0180000650.01 | 0.808741 | 2.668031e-50 | 1.537550e-47 |
MsG0180000241.01 | MsG0180000652.01 | 0.824227 | 9.048832e-54 | 7.966883e-51 |
MsG0180000241.01 | MsG0180000784.01 | 0.804701 | 1.904012e-49 | 9.883892e-47 |
MsG0180000241.01 | MsG0180001063.01 | 0.800090 | 1.696836e-48 | 7.831361e-46 |
MsG0180000241.01 | MsG0180001088.01 | 0.821841 | 3.258757e-53 | 2.681602e-50 |
MsG0180000241.01 | MsG0180001100.01 | 0.810970 | 8.844398e-51 | 5.408089e-48 |
MsG0180000241.01 | MsG0180001105.01 | 0.825941 | 3.562027e-54 | 3.293780e-51 |
MsG0180000241.01 | MsG0180001119.01 | 0.804837 | 1.783158e-49 | 9.289856e-47 |
MsG0180000241.01 | MsG0180003885.01 | 0.815128 | 1.083609e-51 | 7.407355e-49 |
MsG0180000241.01 | MsG0180004025.01 | 0.822380 | 2.443851e-53 | 2.042263e-50 |
MsG0180000241.01 | MsG0180004106.01 | 0.813358 | 2.665210e-51 | 1.736765e-48 |
MsG0180000241.01 | MsG0180004246.01 | 0.835352 | 1.764386e-56 | 2.152210e-53 |
MsG0180000241.01 | MsG0180004493.01 | 0.806221 | 9.140795e-50 | 4.934144e-47 |
MsG0180000241.01 | MsG0180004765.01 | 0.828262 | 9.915634e-55 | 9.804662e-52 |
MsG0180000241.01 | MsG0180005185.01 | 0.800416 | 1.455895e-48 | 6.775508e-46 |
MsG0180000241.01 | MsG0180005220.01 | 0.813729 | 2.209185e-51 | 1.454135e-48 |
MsG0180000241.01 | MsG0180005240.01 | 0.810380 | 1.186333e-50 | 7.139867e-48 |
MsG0180000241.01 | MsG0180005292.01 | 0.826167 | 3.147166e-54 | 2.928748e-51 |
MsG0180000241.01 | MsG0180005729.01 | 0.811401 | 7.132164e-51 | 4.410687e-48 |
MsG0180000241.01 | MsG0180005730.01 | 0.840900 | 6.581338e-58 | 9.510031e-55 |
MsG0180000241.01 | MsG0180005731.01 | 0.812131 | 4.946010e-51 | 3.118843e-48 |
MsG0180000241.01 | MsG0180005732.01 | 0.805473 | 1.312203e-49 | 6.948547e-47 |
MsG0180000241.01 | MsG0180006054.01 | 0.876565 | 1.261919e-68 | 6.146338e-65 |
MsG0180000241.01 | MsG0180006096.01 | 0.800021 | 1.751798e-48 | 8.070960e-46 |
MsG0180000241.01 | MsG0180006104.01 | 0.807686 | 4.477494e-50 | 2.510001e-47 |
MsG0180000241.01 | MsG0180006134.01 | 0.817436 | 3.300349e-52 | 2.403460e-49 |
MsG0180000241.01 | MsG0280006309.01 | 0.819077 | 1.403680e-52 | 1.069379e-49 |
MsG0180000241.01 | MsG0280006570.01 | 0.825282 | 5.103056e-54 | 4.630894e-51 |
MsG0180000241.01 | MsG0280006601.01 | 0.836611 | 8.455024e-57 | 1.070954e-53 |
MsG0180000241.01 | MsG0280006769.01 | 0.813291 | 2.757607e-51 | 1.793601e-48 |
MsG0180000241.01 | MsG0280006896.01 | 0.801133 | 1.039586e-48 | 4.926917e-46 |
MsG0180000241.01 | MsG0280007118.01 | 0.837440 | 5.190451e-57 | 6.742973e-54 |
MsG0180000241.01 | MsG0280007432.01 | 0.813582 | 2.380031e-51 | 1.560339e-48 |
MsG0180000241.01 | MsG0280007575.01 | 0.802413 | 5.677889e-49 | 2.779633e-46 |
MsG0180000241.01 | MsG0280007955.01 | 0.810245 | 1.268836e-50 | 7.609558e-48 |
MsG0180000241.01 | MsG0280008112.01 | 0.851553 | 8.232016e-61 | 1.672435e-57 |
MsG0180000241.01 | MsG0280008113.01 | 0.836152 | 1.106326e-56 | 1.382321e-53 |
MsG0180000241.01 | MsG0280008165.01 | 0.835683 | 1.455175e-56 | 1.792655e-53 |
MsG0180000241.01 | MsG0280008171.01 | 0.849798 | 2.566229e-60 | 4.922124e-57 |
MsG0180000241.01 | MsG0280008383.01 | 0.826450 | 2.694889e-54 | 2.528217e-51 |
MsG0180000241.01 | MsG0280008894.01 | 0.829967 | 3.826728e-55 | 3.977286e-52 |
MsG0180000241.01 | MsG0280008929.01 | 0.805800 | 1.120652e-49 | 5.984352e-47 |
MsG0180000241.01 | MsG0280008932.01 | 0.814803 | 1.279263e-51 | 8.668603e-49 |
MsG0180000241.01 | MsG0280009169.01 | 0.801494 | 8.768949e-49 | 4.193711e-46 |
MsG0180000241.01 | MsG0280009256.01 | 0.838739 | 2.404403e-57 | 3.250146e-54 |
MsG0180000241.01 | MsG0280009421.01 | 0.830355 | 3.076920e-55 | 3.234182e-52 |
MsG0180000241.01 | MsG0280009507.01 | 0.870857 | 1.062968e-66 | 4.198463e-63 |
MsG0180000241.01 | MsG0280009756.01 | 0.805208 | 1.491208e-49 | 7.842891e-47 |
MsG0180000241.01 | MsG0280009757.01 | 0.800849 | 1.188081e-48 | 5.590188e-46 |
MsG0180000241.01 | MsG0280010349.01 | 0.861037 | 1.359164e-63 | 3.792640e-60 |
MsG0180000241.01 | MsG0280010350.01 | 0.828987 | 6.623729e-55 | 6.689097e-52 |
MsG0180000241.01 | MsG0280010517.01 | 0.851658 | 7.689841e-61 | 1.567405e-57 |
MsG0180000241.01 | MsG0280010598.01 | 0.834655 | 2.643039e-56 | 3.156836e-53 |
MsG0180000241.01 | MsG0280010599.01 | 0.808995 | 2.355107e-50 | 1.366437e-47 |
MsG0180000241.01 | MsG0280010722.01 | 0.821124 | 4.770286e-53 | 3.847270e-50 |
MsG0180000241.01 | MsG0280010736.01 | 0.869668 | 2.605015e-66 | 9.856249e-63 |
MsG0180000241.01 | MsG0280010807.01 | 0.831373 | 1.731902e-55 | 1.875836e-52 |
MsG0180000241.01 | MsG0280010916.01 | 0.858250 | 9.371745e-63 | 2.376690e-59 |
MsG0180000241.01 | MsG0280011255.01 | 0.828040 | 1.121154e-54 | 1.101609e-51 |
MsG0180000241.01 | MsG0280011272.01 | -0.864875 | 8.871486e-65 | 2.828120e-61 |
MsG0180000241.01 | MsG0280011305.01 | 0.835137 | 1.999118e-56 | 2.422455e-53 |
MsG0180000241.01 | MsG0280011404.01 | 0.833415 | 5.404463e-56 | 6.219670e-53 |
MsG0180000241.01 | MsG0380012005.01 | 0.830533 | 2.783429e-55 | 2.940567e-52 |
MsG0180000241.01 | MsG0380012085.01 | 0.802645 | 5.084974e-49 | 2.503984e-46 |
MsG0180000241.01 | MsG0380012567.01 | 0.822176 | 2.724491e-53 | 2.263301e-50 |
MsG0180000241.01 | MsG0380012947.01 | 0.802116 | 6.536109e-49 | 3.175464e-46 |
MsG0180000241.01 | MsG0380013050.01 | -0.807319 | 5.357207e-50 | 2.974769e-47 |
MsG0180000241.01 | MsG0380014095.01 | 0.800612 | 1.327894e-48 | 6.210406e-46 |
MsG0180000241.01 | MsG0380014097.01 | 0.824699 | 7.005866e-54 | 6.253142e-51 |
MsG0180000241.01 | MsG0380014103.01 | 0.814393 | 1.576567e-51 | 1.056641e-48 |
MsG0180000241.01 | MsG0380014386.01 | 0.802749 | 4.839891e-49 | 2.389762e-46 |
MsG0180000241.01 | MsG0380014495.01 | 0.803199 | 3.906309e-49 | 1.950998e-46 |
MsG0180000241.01 | MsG0380014706.01 | 0.818354 | 2.047760e-52 | 1.529384e-49 |
MsG0180000241.01 | MsG0380014727.01 | 0.842755 | 2.130652e-58 | 3.262304e-55 |
MsG0180000241.01 | MsG0380014794.01 | 0.806442 | 8.211819e-50 | 4.457570e-47 |
MsG0180000241.01 | MsG0380014866.01 | 0.823769 | 1.158517e-53 | 1.007049e-50 |
MsG0180000241.01 | MsG0380014948.01 | 0.806914 | 6.526274e-50 | 3.585906e-47 |
MsG0180000241.01 | MsG0380015049.01 | 0.803114 | 4.067929e-49 | 2.027236e-46 |
MsG0180000241.01 | MsG0380015131.01 | 0.805320 | 1.412908e-49 | 7.452425e-47 |
MsG0180000241.01 | MsG0380015277.01 | 0.817362 | 3.430160e-52 | 2.492832e-49 |
MsG0180000241.01 | MsG0380015374.01 | 0.806314 | 8.737328e-50 | 4.727345e-47 |
MsG0180000241.01 | MsG0380015486.01 | 0.814961 | 1.180082e-51 | 8.030662e-49 |
MsG0180000241.01 | MsG0380015533.01 | 0.806271 | 8.920151e-50 | 4.821281e-47 |
MsG0180000241.01 | MsG0380015784.01 | 0.801673 | 8.057244e-49 | 3.870718e-46 |
MsG0180000241.01 | MsG0380015885.01 | 0.804714 | 1.891636e-49 | 9.823443e-47 |
MsG0180000241.01 | MsG0380015891.01 | 0.827894 | 1.215653e-54 | 1.189288e-51 |
MsG0180000241.01 | MsG0380016191.01 | -0.824220 | 9.080714e-54 | 7.993362e-51 |
MsG0180000241.01 | MsG0380016285.01 | 0.847370 | 1.207160e-59 | 2.140939e-56 |
MsG0180000241.01 | MsG0380016879.01 | 0.831214 | 1.895198e-55 | 2.042893e-52 |
MsG0180000241.01 | MsG0380017202.01 | 0.833716 | 4.544934e-56 | 5.277483e-53 |
MsG0180000241.01 | MsG0380017244.01 | 0.803850 | 2.862678e-49 | 1.453937e-46 |
MsG0180000241.01 | MsG0380017293.01 | 0.875331 | 3.352378e-68 | 1.558850e-64 |
MsG0180000241.01 | MsG0380017329.01 | 0.801074 | 1.068655e-48 | 5.057162e-46 |
MsG0180000241.01 | MsG0380017437.01 | -0.810512 | 1.110845e-50 | 6.709148e-48 |
MsG0180000241.01 | MsG0380017931.01 | 0.846234 | 2.467890e-59 | 4.219593e-56 |
MsG0180000241.01 | MsG0480018218.01 | 0.803944 | 2.737852e-49 | 1.393915e-46 |
MsG0180000241.01 | MsG0480018236.01 | 0.854023 | 1.621520e-61 | 3.572853e-58 |
MsG0180000241.01 | MsG0480018253.01 | 0.816936 | 4.277309e-52 | 3.072574e-49 |
MsG0180000241.01 | MsG0480018301.01 | 0.814789 | 1.288395e-51 | 8.727143e-49 |
MsG0180000241.01 | MsG0480018402.01 | 0.820987 | 5.128819e-53 | 4.121053e-50 |
MsG0180000241.01 | MsG0480018653.01 | 0.839503 | 1.524022e-57 | 2.108843e-54 |
MsG0180000241.01 | MsG0480018883.01 | 0.820806 | 5.645332e-53 | 4.512938e-50 |
MsG0180000241.01 | MsG0480018985.01 | 0.832283 | 1.032365e-55 | 1.148481e-52 |
MsG0180000241.01 | MsG0480019313.01 | 0.812747 | 3.628130e-51 | 2.325731e-48 |
MsG0180000241.01 | MsG0480019384.01 | 0.810153 | 1.328101e-50 | 7.945847e-48 |
MsG0180000241.01 | MsG0480019711.01 | 0.842316 | 2.785229e-58 | 4.207078e-55 |
MsG0180000241.01 | MsG0480020024.01 | 0.820945 | 5.244439e-53 | 4.208832e-50 |
MsG0180000241.01 | MsG0480020322.01 | 0.831295 | 1.810313e-55 | 1.956064e-52 |
MsG0180000241.01 | MsG0480020323.01 | 0.826301 | 2.924898e-54 | 2.732262e-51 |
MsG0180000241.01 | MsG0480020505.01 | 0.800310 | 1.530022e-48 | 7.101533e-46 |
MsG0180000241.01 | MsG0480020765.01 | 0.829189 | 5.916266e-55 | 6.011632e-52 |
MsG0180000241.01 | MsG0480020887.01 | 0.806845 | 6.750105e-50 | 3.702344e-47 |
MsG0180000241.01 | MsG0480020935.01 | -0.835542 | 1.579044e-56 | 1.936860e-53 |
MsG0180000241.01 | MsG0480021056.01 | 0.817384 | 3.392017e-52 | 2.466676e-49 |
MsG0180000241.01 | MsG0480021561.01 | 0.802104 | 6.572049e-49 | 3.191967e-46 |
MsG0180000241.01 | MsG0480021869.01 | 0.855082 | 8.009005e-62 | 1.827174e-58 |
MsG0180000241.01 | MsG0480022068.01 | 0.833380 | 5.514623e-56 | 6.339997e-53 |
MsG0180000241.01 | MsG0480022178.01 | 0.800539 | 1.374386e-48 | 6.415834e-46 |
MsG0180000241.01 | MsG0480022359.01 | 0.844124 | 9.180446e-59 | 1.467642e-55 |
MsG0180000241.01 | MsG0480022535.01 | 0.817601 | 3.029810e-52 | 2.216294e-49 |
MsG0180000241.01 | MsG0480022572.01 | 0.805245 | 1.465198e-49 | 7.713102e-47 |
MsG0180000241.01 | MsG0480022589.01 | 0.813583 | 2.378513e-51 | 1.559392e-48 |
MsG0180000241.01 | MsG0480022802.01 | 0.826389 | 2.787357e-54 | 2.610467e-51 |
MsG0180000241.01 | MsG0480023045.01 | 0.860895 | 1.500845e-63 | 4.167240e-60 |
MsG0180000241.01 | MsG0480023150.01 | 0.826650 | 2.414727e-54 | 2.278269e-51 |
MsG0180000241.01 | MsG0480023251.01 | 0.885388 | 8.490121e-72 | 5.816899e-68 |
MsG0180000241.01 | MsG0480023488.01 | 0.854528 | 1.159518e-61 | 2.597333e-58 |
MsG0180000241.01 | MsG0480023489.01 | 0.856647 | 2.792989e-62 | 6.712022e-59 |
MsG0180000241.01 | MsG0480023723.01 | 0.801077 | 1.067135e-48 | 5.050343e-46 |
MsG0180000241.01 | MsG0480023878.01 | 0.807166 | 5.771055e-50 | 3.191751e-47 |
MsG0180000241.01 | MsG0580024363.01 | -0.807099 | 5.963393e-50 | 3.292233e-47 |
MsG0180000241.01 | MsG0580024717.01 | 0.809348 | 1.978661e-50 | 1.158982e-47 |
MsG0180000241.01 | MsG0580024788.01 | 0.832199 | 1.083389e-55 | 1.202327e-52 |
MsG0180000241.01 | MsG0580024790.01 | -0.847001 | 1.523916e-59 | 2.670737e-56 |
MsG0180000241.01 | MsG0580024997.01 | 0.827868 | 1.233502e-54 | 1.205838e-51 |
MsG0180000241.01 | MsG0580025226.01 | 0.813355 | 2.669777e-51 | 1.739570e-48 |
MsG0180000241.01 | MsG0580025332.01 | 0.813900 | 2.024852e-51 | 1.339012e-48 |
MsG0180000241.01 | MsG0580025407.01 | -0.838153 | 3.406282e-57 | 4.522238e-54 |
MsG0180000241.01 | MsG0580025612.01 | 0.845117 | 4.960072e-59 | 8.180637e-56 |
MsG0180000241.01 | MsG0580025625.01 | 0.805859 | 1.089067e-49 | 5.824743e-47 |
MsG0180000241.01 | MsG0580025661.01 | 0.800736 | 1.253252e-48 | 5.879691e-46 |
MsG0180000241.01 | MsG0580025827.01 | 0.844134 | 9.126770e-59 | 1.459525e-55 |
MsG0180000241.01 | MsG0580025832.01 | 0.877893 | 4.359843e-69 | 2.229969e-65 |
MsG0180000241.01 | MsG0580025834.01 | 0.808773 | 2.626615e-50 | 1.514964e-47 |
MsG0180000241.01 | MsG0580025843.01 | 0.806682 | 7.306842e-50 | 3.990594e-47 |
MsG0180000241.01 | MsG0580025987.01 | 0.879107 | 1.632546e-69 | 8.741863e-66 |
MsG0180000241.01 | MsG0580026122.01 | 0.821476 | 3.956809e-53 | 3.222478e-50 |
MsG0180000241.01 | MsG0580026131.01 | 0.804640 | 1.960079e-49 | 1.015895e-46 |
MsG0180000241.01 | MsG0580026159.01 | -0.812456 | 4.200673e-51 | 2.672304e-48 |
MsG0180000241.01 | MsG0580026174.01 | 0.818782 | 1.637542e-52 | 1.237483e-49 |
MsG0180000241.01 | MsG0580026304.01 | 0.851450 | 8.804044e-61 | 1.782714e-57 |
MsG0180000241.01 | MsG0580028419.01 | 0.802266 | 6.086449e-49 | 2.968440e-46 |
MsG0180000241.01 | MsG0580028428.01 | 0.838559 | 2.675460e-57 | 3.596771e-54 |
MsG0180000241.01 | MsG0580028445.01 | 0.826144 | 3.187526e-54 | 2.964388e-51 |
MsG0180000241.01 | MsG0580028551.01 | 0.800204 | 1.608045e-48 | 7.443093e-46 |
MsG0180000241.01 | MsG0580029236.01 | 0.837027 | 6.623658e-57 | 8.496603e-54 |
MsG0180000241.01 | MsG0580029376.01 | 0.805437 | 1.335355e-49 | 7.064559e-47 |
MsG0180000241.01 | MsG0580029879.01 | 0.808271 | 3.361630e-50 | 1.913797e-47 |
MsG0180000241.01 | MsG0580029880.01 | 0.832318 | 1.012524e-55 | 1.127536e-52 |
MsG0180000241.01 | MsG0580030000.01 | 0.851250 | 1.002756e-60 | 2.017386e-57 |
MsG0180000241.01 | MsG0680030566.01 | -0.823125 | 1.638775e-53 | 1.398725e-50 |
MsG0180000241.01 | MsG0680030599.01 | 0.831475 | 1.634489e-55 | 1.775768e-52 |
MsG0180000241.01 | MsG0680030616.01 | 0.851399 | 9.100849e-61 | 1.839915e-57 |
MsG0180000241.01 | MsG0680030677.01 | 0.845292 | 4.448365e-59 | 7.378785e-56 |
MsG0180000241.01 | MsG0680030680.01 | 0.810130 | 1.343053e-50 | 8.030520e-48 |
MsG0180000241.01 | MsG0680030880.01 | 0.820748 | 5.821569e-53 | 4.646114e-50 |
MsG0180000241.01 | MsG0680030992.01 | 0.809168 | 2.162419e-50 | 1.260526e-47 |
MsG0180000241.01 | MsG0680031108.01 | 0.838092 | 3.531863e-57 | 4.680607e-54 |
MsG0180000241.01 | MsG0680031264.01 | 0.810476 | 1.131025e-50 | 6.824560e-48 |
MsG0180000241.01 | MsG0680031344.01 | 0.825450 | 4.656036e-54 | 4.245069e-51 |
MsG0180000241.01 | MsG0680031708.01 | 0.806010 | 1.012100e-49 | 5.434041e-47 |
MsG0180000241.01 | MsG0680031998.01 | 0.805434 | 1.337223e-49 | 7.073952e-47 |
MsG0180000241.01 | MsG0680032460.01 | -0.830635 | 2.627461e-55 | 2.784313e-52 |
MsG0180000241.01 | MsG0680033465.01 | 0.853579 | 2.176552e-61 | 4.725480e-58 |
MsG0180000241.01 | MsG0680033602.01 | 0.833186 | 6.164336e-56 | 7.045679e-53 |
MsG0180000241.01 | MsG0680034230.01 | 0.820281 | 7.453824e-53 | 5.872117e-50 |
MsG0180000241.01 | MsG0680034480.01 | 0.801394 | 9.192877e-49 | 4.385230e-46 |
MsG0180000241.01 | MsG0680034601.01 | 0.833732 | 4.502936e-56 | 5.231361e-53 |
MsG0180000241.01 | MsG0680034721.01 | 0.837566 | 4.818434e-57 | 6.283854e-54 |
MsG0180000241.01 | MsG0680034739.01 | 0.808830 | 2.554107e-50 | 1.475392e-47 |
MsG0180000241.01 | MsG0680034767.01 | 0.808988 | 2.363055e-50 | 1.370789e-47 |
MsG0180000241.01 | MsG0680034985.01 | 0.801150 | 1.031520e-48 | 4.890643e-46 |
MsG0180000241.01 | MsG0680035005.01 | 0.828443 | 8.966580e-55 | 8.914023e-52 |
MsG0180000241.01 | MsG0680035580.01 | 0.833138 | 6.334379e-56 | 7.230224e-53 |
MsG0180000241.01 | MsG0680035707.01 | 0.869864 | 2.249677e-66 | 8.572108e-63 |
MsG0180000241.01 | MsG0780035960.01 | 0.809067 | 2.272886e-50 | 1.321318e-47 |
MsG0180000241.01 | MsG0780036128.01 | 0.825515 | 4.494450e-54 | 4.105514e-51 |
MsG0180000241.01 | MsG0780036201.01 | 0.801717 | 7.891883e-49 | 3.795453e-46 |
MsG0180000241.01 | MsG0780036509.01 | 0.804539 | 2.057950e-49 | 1.063818e-46 |
MsG0180000241.01 | MsG0780036517.01 | 0.839741 | 1.321797e-57 | 1.842302e-54 |
MsG0180000241.01 | MsG0780036593.01 | 0.859361 | 4.363338e-63 | 1.149432e-59 |
MsG0180000241.01 | MsG0780036595.01 | 0.862142 | 6.248728e-64 | 1.811044e-60 |
MsG0180000241.01 | MsG0780036596.01 | 0.847486 | 1.121825e-59 | 1.997076e-56 |
MsG0180000241.01 | MsG0780036602.01 | 0.835886 | 1.291991e-56 | 1.601271e-53 |
MsG0180000241.01 | MsG0780036803.01 | 0.801142 | 1.035418e-48 | 4.908076e-46 |
MsG0180000241.01 | MsG0780037054.01 | 0.800187 | 1.620784e-48 | 7.498911e-46 |
MsG0180000241.01 | MsG0780037292.01 | 0.818206 | 2.211782e-52 | 1.645032e-49 |
MsG0180000241.01 | MsG0780037701.01 | 0.805768 | 1.138197e-49 | 6.073204e-47 |
MsG0180000241.01 | MsG0780038377.01 | 0.837644 | 4.601435e-57 | 6.016012e-54 |
MsG0180000241.01 | MsG0780038378.01 | 0.853419 | 2.419158e-61 | 5.223977e-58 |
MsG0180000241.01 | MsG0780038439.01 | 0.804556 | 2.040840e-49 | 1.055471e-46 |
MsG0180000241.01 | MsG0780038691.01 | 0.808497 | 3.008628e-50 | 1.722934e-47 |
MsG0180000241.01 | MsG0780038907.01 | 0.835902 | 1.280341e-56 | 1.587582e-53 |
MsG0180000241.01 | MsG0780039178.01 | 0.808448 | 3.082436e-50 | 1.762987e-47 |
MsG0180000241.01 | MsG0780039338.01 | 0.800809 | 1.210598e-48 | 5.690046e-46 |
MsG0180000241.01 | MsG0780039387.01 | 0.847758 | 9.442745e-60 | 1.695519e-56 |
MsG0180000241.01 | MsG0780039432.01 | 0.815954 | 7.093045e-52 | 4.959946e-49 |
MsG0180000241.01 | MsG0780039438.01 | 0.808095 | 3.665508e-50 | 2.077034e-47 |
MsG0180000241.01 | MsG0780039573.01 | 0.815010 | 1.151039e-51 | 7.843610e-49 |
MsG0180000241.01 | MsG0780039867.01 | -0.839963 | 1.156814e-57 | 1.623777e-54 |
MsG0180000241.01 | MsG0780040235.01 | 0.801051 | 1.080441e-48 | 5.110000e-46 |
MsG0180000241.01 | MsG0780040576.01 | -0.839107 | 1.931318e-57 | 2.640024e-54 |
MsG0180000241.01 | MsG0780040763.01 | 0.810566 | 1.081640e-50 | 6.542156e-48 |
MsG0180000241.01 | MsG0780040888.01 | 0.833234 | 5.993973e-56 | 6.860821e-53 |
MsG0180000241.01 | MsG0780041074.01 | 0.871336 | 7.383859e-67 | 2.967808e-63 |
MsG0180000241.01 | MsG0780041091.01 | 0.805537 | 1.272715e-49 | 6.750278e-47 |
MsG0180000241.01 | MsG0780041187.01 | 0.837188 | 6.023507e-57 | 7.764432e-54 |
MsG0180000241.01 | MsG0780041262.01 | 0.859926 | 2.950076e-63 | 7.923351e-60 |
MsG0180000241.01 | MsG0780041301.01 | 0.809972 | 1.452685e-50 | 8.650520e-48 |
MsG0180000241.01 | MsG0780041416.01 | 0.804862 | 1.761709e-49 | 9.184156e-47 |
MsG0180000241.01 | MsG0780041468.01 | 0.864192 | 1.451520e-64 | 4.518052e-61 |
MsG0180000241.01 | MsG0780041734.01 | -0.840469 | 8.535337e-58 | 1.216949e-54 |
MsG0180000241.01 | MsG0880041852.01 | 0.831094 | 2.027828e-55 | 2.178230e-52 |
MsG0180000241.01 | MsG0880041861.01 | 0.875815 | 2.288225e-68 | 1.083793e-64 |
MsG0180000241.01 | MsG0880041863.01 | 0.841008 | 6.164196e-58 | 8.936494e-55 |
MsG0180000241.01 | MsG0880041864.01 | 0.858716 | 6.805053e-63 | 1.753102e-59 |
MsG0180000241.01 | MsG0880042022.01 | 0.807510 | 4.879658e-50 | 2.723072e-47 |
MsG0180000241.01 | MsG0880042276.01 | 0.811464 | 6.909704e-51 | 4.280140e-48 |
MsG0180000241.01 | MsG0880042622.01 | 0.811325 | 7.408574e-51 | 4.572013e-48 |
MsG0180000241.01 | MsG0880042700.01 | 0.831512 | 1.600766e-55 | 1.740969e-52 |
MsG0180000241.01 | MsG0880042988.01 | 0.813338 | 2.692115e-51 | 1.753306e-48 |
MsG0180000241.01 | MsG0880043037.01 | 0.807215 | 5.636164e-50 | 3.121103e-47 |
MsG0180000241.01 | MsG0880043157.01 | 0.893739 | 4.748509e-75 | 4.583381e-71 |
MsG0180000241.01 | MsG0880043298.01 | 0.821286 | 4.376133e-53 | 3.545146e-50 |
MsG0180000241.01 | MsG0880043937.01 | 0.820091 | 8.237478e-53 | 6.456276e-50 |
MsG0180000241.01 | MsG0880043941.01 | 0.830894 | 2.270289e-55 | 2.424393e-52 |
MsG0180000241.01 | MsG0880043955.01 | 0.817197 | 3.736892e-52 | 2.703386e-49 |
MsG0180000241.01 | MsG0880044043.01 | 0.827104 | 1.881229e-54 | 1.798434e-51 |
MsG0180000241.01 | MsG0880044131.01 | 0.806889 | 6.605657e-50 | 3.627148e-47 |
MsG0180000241.01 | MsG0880044206.01 | 0.801626 | 8.239673e-49 | 3.953520e-46 |
MsG0180000241.01 | MsG0880044209.01 | 0.823328 | 1.469834e-53 | 1.261579e-50 |
MsG0180000241.01 | MsG0880044380.01 | 0.803533 | 3.331531e-49 | 1.678343e-46 |
MsG0180000241.01 | MsG0880044611.01 | -0.827266 | 1.719842e-54 | 1.652142e-51 |
MsG0180000241.01 | MsG0880044876.01 | 0.801193 | 1.010693e-48 | 4.797004e-46 |
MsG0180000241.01 | MsG0880045371.01 | 0.808045 | 3.755833e-50 | 2.125339e-47 |
MsG0180000241.01 | MsG0880045722.01 | 0.807930 | 3.974167e-50 | 2.241987e-47 |
MsG0180000241.01 | MsG0880045765.01 | 0.803873 | 2.831314e-49 | 1.438883e-46 |
MsG0180000241.01 | MsG0880045771.01 | 0.829088 | 6.258650e-55 | 6.340061e-52 |
MsG0180000241.01 | MsG0880045992.01 | 0.827880 | 1.225279e-54 | 1.198192e-51 |
MsG0180000241.01 | MsG0880046268.01 | 0.828484 | 8.764615e-55 | 8.723444e-52 |
MsG0180000241.01 | MsG0880046296.01 | 0.800210 | 1.603865e-48 | 7.424872e-46 |
MsG0180000241.01 | MsG0880046699.01 | 0.809016 | 2.330277e-50 | 1.352805e-47 |
MsG0180000241.01 | MsG0880046724.01 | 0.802464 | 5.542566e-49 | 2.716805e-46 |
MsG0180000241.01 | MsG0880046809.01 | 0.848459 | 6.045984e-60 | 1.110386e-56 |
MsG0180000241.01 | MsG0880047046.01 | 0.803608 | 3.214608e-49 | 1.622496e-46 |
MsG0180000241.01 | MsG0880047055.01 | -0.837328 | 5.547215e-57 | 7.181158e-54 |
MsG0180000241.01 | MsG0880047152.01 | 0.814242 | 1.702561e-51 | 1.136366e-48 |
MsG0180000241.01 | MsG0880047267.01 | 0.828967 | 6.695407e-55 | 6.757929e-52 |
MsG0180000241.01 | MsG0880047294.01 | 0.812197 | 4.785958e-51 | 3.023364e-48 |
MsG0180000241.01 | MsG0880047394.01 | 0.813170 | 2.930822e-51 | 1.899923e-48 |
MsG0180000241.01 | MsG0880047481.01 | -0.827261 | 1.724628e-54 | 1.656531e-51 |
MsG0180000241.01 | MsG0880047758.01 | 0.820647 | 6.140742e-53 | 4.886735e-50 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180000241.01.T01 | MTR_1g019800 | 90.323 | 124 | 12 | 0 | 1 | 124 | 1 | 124 | 8.05e-79 | 232 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 61 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTAGAGCATTCCGTCCTTTA+AGG | 0.089873 | 1:+3291564 | None:intergenic |
CCCTAAAATAATACACTTTA+TGG | 0.093718 | 1:+3291606 | None:intergenic |
TTAACTTAACTTTACCTTAA+AGG | 0.134585 | 1:-3291578 | MsG0180000241.01.T01:five_prime_UTR |
AGTTCTGATTCTTACATTTC+TGG | 0.208989 | 1:+3290579 | None:intergenic |
CAAAGTTACTTGAATTTATA+TGG | 0.221019 | 1:-3290637 | MsG0180000241.01.T01:three_prime_UTR |
TCTTCATCAAGATCACTAAT+TGG | 0.271099 | 1:+3291258 | None:intergenic |
TATACAAGATGTTTATATAT+TGG | 0.271828 | 1:+3291460 | None:intergenic |
ATTATGTGTTACTGGGAAAA+TGG | 0.272982 | 1:-3290969 | MsG0180000241.01.T01:CDS |
TGGTTGAACATTATTGAATA+AGG | 0.278431 | 1:-3290557 | MsG0180000241.01.T01:three_prime_UTR |
TTGGAAGCGTTCTATAATTC+AGG | 0.285690 | 1:-3290775 | MsG0180000241.01.T01:three_prime_UTR |
CATTGTGAAGGATGGCCTTT+TGG | 0.301790 | 1:-3290744 | MsG0180000241.01.T01:three_prime_UTR |
ACAAGAGAATTATGTGTTAC+TGG | 0.321124 | 1:-3290977 | MsG0180000241.01.T01:CDS |
CAATGAAGCAGGTCAATTAA+AGG | 0.321544 | 1:-3291510 | MsG0180000241.01.T01:five_prime_UTR |
TTACCTCCCTCCTTTGCCTT+TGG | 0.326286 | 1:+3290944 | None:intergenic |
GTGTATTCTTCTAGTGCTAA+TGG | 0.339241 | 1:-3290870 | MsG0180000241.01.T01:CDS |
TGCAAAGCATTTGCATCTCT+TGG | 0.342800 | 1:+3291365 | None:intergenic |
TTGACCTGCTTCATTGATAG+TGG | 0.371174 | 1:+3291517 | None:intergenic |
ACACATAATTCTCTTGTTGC+AGG | 0.374763 | 1:+3290983 | None:intergenic |
TGTATTCTTCTAGTGCTAAT+GGG | 0.374850 | 1:-3290869 | MsG0180000241.01.T01:CDS |
TTGCATCTCTTGGAATGGTT+TGG | 0.387372 | 1:+3291375 | None:intergenic |
CATATAAATTCAAGTAACTT+TGG | 0.429792 | 1:+3290638 | None:intergenic |
TAGTGATCTTGATGAAGAAC+AGG | 0.434961 | 1:-3291253 | MsG0180000241.01.T01:CDS |
TTTCTGGCTTTAATCAGAAT+AGG | 0.450498 | 1:+3290595 | None:intergenic |
ATTCAAGTAACTTTGGTACT+TGG | 0.457278 | 1:+3290645 | None:intergenic |
TTTACTTTCAGTTTCACAAT+GGG | 0.475858 | 1:-3291423 | MsG0180000241.01.T01:exon |
ATGCTTTGCAGCTGCTCTGA+AGG | 0.476673 | 1:-3291352 | MsG0180000241.01.T01:CDS |
TAATTGGAAACTCCTCTTCA+AGG | 0.478540 | 1:+3291274 | None:intergenic |
AAACTCTCTCTCAGTAGGAT+TGG | 0.486208 | 1:+3291022 | None:intergenic |
GGTTTGGTTGCTCCTCCTCA+TGG | 0.490726 | 1:+3291391 | None:intergenic |
GGCGGTTAGAAGCCGAGCTA+TGG | 0.496315 | 1:-3291062 | MsG0180000241.01.T01:CDS |
AGAAATGTAAGAATCAGAAC+TGG | 0.513218 | 1:-3290577 | MsG0180000241.01.T01:three_prime_UTR |
CTAAGTCACCATCTGAATCA+TGG | 0.518553 | 1:-3290686 | MsG0180000241.01.T01:three_prime_UTR |
GCTTTACGACAGAGACCAAA+AGG | 0.525795 | 1:+3290729 | None:intergenic |
AGCATTTGCATCTCTTGGAA+TGG | 0.526952 | 1:+3291370 | None:intergenic |
CAAGAGAATTATGTGTTACT+GGG | 0.534810 | 1:-3290976 | MsG0180000241.01.T01:CDS |
TTCGACCAAAAGTTTGACAC+TGG | 0.545482 | 1:+3291319 | None:intergenic |
TCTTCTAGTGCTAATGGGGA+AGG | 0.547226 | 1:-3290864 | MsG0180000241.01.T01:CDS |
CTTAACTTTACCTTAAAGGA+CGG | 0.549608 | 1:-3291574 | MsG0180000241.01.T01:five_prime_UTR |
TAAAGGACGGAATGCTCTAG+TGG | 0.550594 | 1:-3291561 | MsG0180000241.01.T01:five_prime_UTR |
TCAAGCTTGAACATCTTGAA+AGG | 0.551732 | 1:+3290820 | None:intergenic |
AATGGAACCAAAGGCAAAGG+AGG | 0.558037 | 1:-3290951 | MsG0180000241.01.T01:CDS |
TTCGACTACAAGCCTTGAAG+AGG | 0.565475 | 1:-3291286 | MsG0180000241.01.T01:CDS |
TACTGGGAAAATGGAACCAA+AGG | 0.569555 | 1:-3290960 | MsG0180000241.01.T01:CDS |
CGATACAACCATGATTCAGA+TGG | 0.575454 | 1:+3290678 | None:intergenic |
AAGGCCACTATCAATGAAGC+AGG | 0.578192 | 1:-3291521 | MsG0180000241.01.T01:five_prime_UTR |
AAAGGACGGAATGCTCTAGT+GGG | 0.578314 | 1:-3291560 | MsG0180000241.01.T01:five_prime_UTR |
CATGATTCAGATGGTGACTT+AGG | 0.584417 | 1:+3290687 | None:intergenic |
ATTTACTTTCAGTTTCACAA+TGG | 0.590773 | 1:-3291424 | MsG0180000241.01.T01:exon |
TCGACCAAAAGTTTGACACT+GGG | 0.608137 | 1:+3291320 | None:intergenic |
GTATTCTTCTAGTGCTAATG+GGG | 0.608962 | 1:-3290868 | MsG0180000241.01.T01:CDS |
GATGGTGACTTAGGCAGTGG+TGG | 0.623202 | 1:+3290696 | None:intergenic |
GGGGTTTCAATATTGCTGCA+AGG | 0.632160 | 1:-3291540 | MsG0180000241.01.T01:five_prime_UTR |
GAAAATGGAACCAAAGGCAA+AGG | 0.636908 | 1:-3290954 | MsG0180000241.01.T01:CDS |
ATGGAACCAAAGGCAAAGGA+GGG | 0.641016 | 1:-3290950 | MsG0180000241.01.T01:CDS |
TTATTTCTATGCATAAGTTG+CGG | 0.643978 | 1:+3291715 | None:intergenic |
GAGGGAGGTAATGAAGAACA+AGG | 0.652290 | 1:-3290932 | MsG0180000241.01.T01:CDS |
TCAGATGGTGACTTAGGCAG+TGG | 0.663320 | 1:+3290693 | None:intergenic |
GAACCAAAGGCAAAGGAGGG+AGG | 0.663364 | 1:-3290947 | MsG0180000241.01.T01:CDS |
TCTTCAGGTGATTGTCTCGG+CGG | 0.664433 | 1:-3291080 | MsG0180000241.01.T01:intron |
AAGGACGGAATGCTCTAGTG+GGG | 0.669921 | 1:-3291559 | MsG0180000241.01.T01:five_prime_UTR |
TGTTGCAGGAGAATATACCC+AGG | 0.714302 | 1:+3290997 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATACAAGATGTTTATATAT+TGG | + | Chr1:3290840-3290859 | None:intergenic | 15.0% |
!!! | TCAAAAATAGTTTGATTTTA+AGG | + | Chr1:3291101-3291120 | None:intergenic | 15.0% |
!! | CAAAGTTACTTGAATTTATA+TGG | - | Chr1:3291660-3291679 | MsG0180000241.01.T01:five_prime_UTR | 20.0% |
!! | CATATAAATTCAAGTAACTT+TGG | + | Chr1:3291662-3291681 | None:intergenic | 20.0% |
!! | TTAACTTAACTTTACCTTAA+AGG | - | Chr1:3290719-3290738 | MsG0180000241.01.T01:three_prime_UTR | 20.0% |
!!! | AATTAGTTATTGTTCTTTTG+TGG | - | Chr1:3291191-3291210 | MsG0180000241.01.T01:intron | 20.0% |
!!! | CCATAAAGTGTATTATTTTA+GGG | - | Chr1:3290691-3290710 | MsG0180000241.01.T01:three_prime_UTR | 20.0% |
!!! | TGCATCAATTAAATTTTCTT+AGG | - | Chr1:3290612-3290631 | MsG0180000241.01.T01:three_prime_UTR | 20.0% |
! | ATTTACTTTCAGTTTCACAA+TGG | - | Chr1:3290873-3290892 | MsG0180000241.01.T01:CDS | 25.0% |
! | CCCTAAAATAATACACTTTA+TGG | + | Chr1:3290694-3290713 | None:intergenic | 25.0% |
! | TGGTTGAACATTATTGAATA+AGG | - | Chr1:3291740-3291759 | MsG0180000241.01.T01:five_prime_UTR | 25.0% |
! | TTTACTTTCAGTTTCACAAT+GGG | - | Chr1:3290874-3290893 | MsG0180000241.01.T01:CDS | 25.0% |
!! | GCCATAAAGTGTATTATTTT+AGG | - | Chr1:3290690-3290709 | MsG0180000241.01.T01:three_prime_UTR | 25.0% |
!!! | ATTTTGATTTGTCGGAATAT+TGG | - | Chr1:3291503-3291522 | MsG0180000241.01.T01:five_prime_UTR | 25.0% |
!!! | CTTGAATGATTTTGATTTGT+CGG | - | Chr1:3291495-3291514 | MsG0180000241.01.T01:five_prime_UTR | 25.0% |
!!! | TAGTTTGATTTTAAGGTTGA+AGG | + | Chr1:3291094-3291113 | None:intergenic | 25.0% |
!!! | TTATTTCTATGCATAAGTTG+CGG | + | Chr1:3290585-3290604 | None:intergenic | 25.0% |
ACAAGAGAATTATGTGTTAC+TGG | - | Chr1:3291320-3291339 | MsG0180000241.01.T01:CDS | 30.0% | |
AGAAATGTAAGAATCAGAAC+TGG | - | Chr1:3291720-3291739 | MsG0180000241.01.T01:five_prime_UTR | 30.0% | |
ATTCAAGTAACTTTGGTACT+TGG | + | Chr1:3291655-3291674 | None:intergenic | 30.0% | |
CTTAACTTTACCTTAAAGGA+CGG | - | Chr1:3290723-3290742 | MsG0180000241.01.T01:three_prime_UTR | 30.0% | |
TCTTCATCAAGATCACTAAT+TGG | + | Chr1:3291042-3291061 | None:intergenic | 30.0% | |
TGTATTCTTCTAGTGCTAAT+GGG | - | Chr1:3291428-3291447 | MsG0180000241.01.T01:five_prime_UTR | 30.0% | |
! | AGTTCTGATTCTTACATTTC+TGG | + | Chr1:3291721-3291740 | None:intergenic | 30.0% |
! | ATTATGTGTTACTGGGAAAA+TGG | - | Chr1:3291328-3291347 | MsG0180000241.01.T01:CDS | 30.0% |
! | CAAGAGAATTATGTGTTACT+GGG | - | Chr1:3291321-3291340 | MsG0180000241.01.T01:CDS | 30.0% |
!! | TTTCTGGCTTTAATCAGAAT+AGG | + | Chr1:3291705-3291724 | None:intergenic | 30.0% |
ACACATAATTCTCTTGTTGC+AGG | + | Chr1:3291317-3291336 | None:intergenic | 35.0% | |
CAATGAAGCAGGTCAATTAA+AGG | - | Chr1:3290787-3290806 | MsG0180000241.01.T01:three_prime_UTR | 35.0% | |
GTATTCTTCTAGTGCTAATG+GGG | - | Chr1:3291429-3291448 | MsG0180000241.01.T01:five_prime_UTR | 35.0% | |
GTGTATTCTTCTAGTGCTAA+TGG | - | Chr1:3291427-3291446 | MsG0180000241.01.T01:exon | 35.0% | |
TAATTGGAAACTCCTCTTCA+AGG | + | Chr1:3291026-3291045 | None:intergenic | 35.0% | |
TAGTGATCTTGATGAAGAAC+AGG | - | Chr1:3291044-3291063 | MsG0180000241.01.T01:CDS | 35.0% | |
TCAAGCTTGAACATCTTGAA+AGG | + | Chr1:3291480-3291499 | None:intergenic | 35.0% | |
! | GTTCTTTTGTGGTTTTCTTC+AGG | - | Chr1:3291202-3291221 | MsG0180000241.01.T01:intron | 35.0% |
! | TTTTCCCAGTGTCAAACTTT+TGG | - | Chr1:3290973-3290992 | MsG0180000241.01.T01:CDS | 35.0% |
! | TTTTCTTCAGGTGATTGTCT+CGG | - | Chr1:3291214-3291233 | MsG0180000241.01.T01:intron | 35.0% |
!! | AGTTTTGTCATTGTGAAGGA+TGG | - | Chr1:3291545-3291564 | MsG0180000241.01.T01:five_prime_UTR | 35.0% |
!! | GTGAAAGAGAAGAGTTTTGT+CGG | - | Chr1:3291387-3291406 | MsG0180000241.01.T01:CDS | 35.0% |
!! | TCTTTTGTTTCTCCATAGCT+CGG | + | Chr1:3291250-3291269 | None:intergenic | 35.0% |
!! | TTGGAAGCGTTCTATAATTC+AGG | - | Chr1:3291522-3291541 | MsG0180000241.01.T01:five_prime_UTR | 35.0% |
AAACTCTCTCTCAGTAGGAT+TGG | + | Chr1:3291278-3291297 | None:intergenic | 40.0% | |
AGCATTTGCATCTCTTGGAA+TGG | + | Chr1:3290930-3290949 | None:intergenic | 40.0% | |
AGGAAAAACTCTCTCTCAGT+AGG | + | Chr1:3291283-3291302 | None:intergenic | 40.0% | |
CATGATTCAGATGGTGACTT+AGG | + | Chr1:3291613-3291632 | None:intergenic | 40.0% | |
CGATACAACCATGATTCAGA+TGG | + | Chr1:3291622-3291641 | None:intergenic | 40.0% | |
CTAAGTCACCATCTGAATCA+TGG | - | Chr1:3291611-3291630 | MsG0180000241.01.T01:five_prime_UTR | 40.0% | |
GAAAATGGAACCAAAGGCAA+AGG | - | Chr1:3291343-3291362 | MsG0180000241.01.T01:CDS | 40.0% | |
TACTGGGAAAATGGAACCAA+AGG | - | Chr1:3291337-3291356 | MsG0180000241.01.T01:CDS | 40.0% | |
TCGACCAAAAGTTTGACACT+GGG | + | Chr1:3290980-3290999 | None:intergenic | 40.0% | |
TTCGACCAAAAGTTTGACAC+TGG | + | Chr1:3290981-3291000 | None:intergenic | 40.0% | |
TTGACCTGCTTCATTGATAG+TGG | + | Chr1:3290783-3290802 | None:intergenic | 40.0% | |
TTGCATCTCTTGGAATGGTT+TGG | + | Chr1:3290925-3290944 | None:intergenic | 40.0% | |
! | AAACTTTTGGTCGAAGTCGA+AGG | - | Chr1:3290986-3291005 | MsG0180000241.01.T01:CDS | 40.0% |
! | AATGGGTGTTTTCTACCATG+AGG | - | Chr1:3290891-3290910 | MsG0180000241.01.T01:CDS | 40.0% |
! | ACTGAGAGAGAGTTTTTCCT+GGG | - | Chr1:3291283-3291302 | MsG0180000241.01.T01:CDS | 40.0% |
! | TACTGAGAGAGAGTTTTTCC+TGG | - | Chr1:3291282-3291301 | MsG0180000241.01.T01:CDS | 40.0% |
! | TGCAAAGCATTTGCATCTCT+TGG | + | Chr1:3290935-3290954 | None:intergenic | 40.0% |
!! | CAGGAGTTTTGTCATTGTGA+AGG | - | Chr1:3291541-3291560 | MsG0180000241.01.T01:five_prime_UTR | 40.0% |
AAAGGACGGAATGCTCTAGT+GGG | - | Chr1:3290737-3290756 | MsG0180000241.01.T01:three_prime_UTR | 45.0% | |
AAGGCCACTATCAATGAAGC+AGG | - | Chr1:3290776-3290795 | MsG0180000241.01.T01:three_prime_UTR | 45.0% | |
AATGGAACCAAAGGCAAAGG+AGG | - | Chr1:3291346-3291365 | MsG0180000241.01.T01:CDS | 45.0% | |
ATGGAACCAAAGGCAAAGGA+GGG | - | Chr1:3291347-3291366 | MsG0180000241.01.T01:CDS | 45.0% | |
GAGGGAGGTAATGAAGAACA+AGG | - | Chr1:3291365-3291384 | MsG0180000241.01.T01:CDS | 45.0% | |
GCTTTACGACAGAGACCAAA+AGG | + | Chr1:3291571-3291590 | None:intergenic | 45.0% | |
GGGGTTTCAATATTGCTGCA+AGG | - | Chr1:3290757-3290776 | MsG0180000241.01.T01:three_prime_UTR | 45.0% | |
TAAAGGACGGAATGCTCTAG+TGG | - | Chr1:3290736-3290755 | MsG0180000241.01.T01:three_prime_UTR | 45.0% | |
TCTTCTAGTGCTAATGGGGA+AGG | - | Chr1:3291433-3291452 | MsG0180000241.01.T01:five_prime_UTR | 45.0% | |
TGTTGCAGGAGAATATACCC+AGG | + | Chr1:3291303-3291322 | None:intergenic | 45.0% | |
TTCGACTACAAGCCTTGAAG+AGG | - | Chr1:3291011-3291030 | MsG0180000241.01.T01:CDS | 45.0% | |
! | CATTGTGAAGGATGGCCTTT+TGG | - | Chr1:3291553-3291572 | MsG0180000241.01.T01:five_prime_UTR | 45.0% |
! | CTAGAGCATTCCGTCCTTTA+AGG | + | Chr1:3290736-3290755 | None:intergenic | 45.0% |
AAGGACGGAATGCTCTAGTG+GGG | - | Chr1:3290738-3290757 | MsG0180000241.01.T01:three_prime_UTR | 50.0% | |
ATGCTTTGCAGCTGCTCTGA+AGG | - | Chr1:3290945-3290964 | MsG0180000241.01.T01:CDS | 50.0% | |
TCAGATGGTGACTTAGGCAG+TGG | + | Chr1:3291607-3291626 | None:intergenic | 50.0% | |
TCTTCAGGTGATTGTCTCGG+CGG | - | Chr1:3291217-3291236 | MsG0180000241.01.T01:intron | 50.0% | |
TTACCTCCCTCCTTTGCCTT+TGG | + | Chr1:3291356-3291375 | None:intergenic | 50.0% | |
! | GGGTGTTTTCTACCATGAGG+AGG | - | Chr1:3290894-3290913 | MsG0180000241.01.T01:CDS | 50.0% |
GAACCAAAGGCAAAGGAGGG+AGG | - | Chr1:3291350-3291369 | MsG0180000241.01.T01:CDS | 55.0% | |
GATGGTGACTTAGGCAGTGG+TGG | + | Chr1:3291604-3291623 | None:intergenic | 55.0% | |
! | GGTTTGGTTGCTCCTCCTCA+TGG | + | Chr1:3290909-3290928 | None:intergenic | 55.0% |
GGCGGTTAGAAGCCGAGCTA+TGG | - | Chr1:3291235-3291254 | MsG0180000241.01.T01:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 3290543 | 3291776 | 3290543 | ID=MsG0180000241.01;Name=MsG0180000241.01 |
Chr1 | mRNA | 3290543 | 3291776 | 3290543 | ID=MsG0180000241.01.T01;Parent=MsG0180000241.01;Name=MsG0180000241.01.T01;_AED=0.09;_eAED=0.09;_QI=349|1|1|1|1|1|2|307|140 |
Chr1 | exon | 3291251 | 3291776 | 3291251 | ID=MsG0180000241.01.T01:exon:6171;Parent=MsG0180000241.01.T01 |
Chr1 | exon | 3290543 | 3291095 | 3290543 | ID=MsG0180000241.01.T01:exon:6172;Parent=MsG0180000241.01.T01 |
Chr1 | five_prime_UTR | 3291428 | 3291776 | 3291428 | ID=MsG0180000241.01.T01:five_prime_utr;Parent=MsG0180000241.01.T01 |
Chr1 | CDS | 3291251 | 3291427 | 3291251 | ID=MsG0180000241.01.T01:cds;Parent=MsG0180000241.01.T01 |
Chr1 | CDS | 3290850 | 3291095 | 3290850 | ID=MsG0180000241.01.T01:cds;Parent=MsG0180000241.01.T01 |
Chr1 | three_prime_UTR | 3290543 | 3290849 | 3290543 | ID=MsG0180000241.01.T01:three_prime_utr;Parent=MsG0180000241.01.T01 |
Gene Sequence |
Protein sequence |