AlfalfaGEDB | MsG0380014506.01

M. sativa cultivar ZhongmuNo.1 / MsG0380014506.01

KEGG: K00475
GO: -
PFAM: PF14226

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014506.01.T01	XP_013460013.1	87.391	230	23	2	4	228	1	229	8.11E-143	413

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014506.01.T01	Q07353	72.889	225	55	2	9	228	8	231	4.55E-119	346

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014506.01.T01	A0A072UW43	87.391	230	23	2	4	228	1	229	3.87e-143	413

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180000091.01	MsG0380014506.01	0.800595	1.338557e-48	6.257581e-46
MsG0180005524.01	MsG0380014506.01	0.808469	3.049776e-50	1.745263e-47
MsG0380012067.01	MsG0380014506.01	0.812242	4.677471e-51	2.958501e-48
MsG0380014506.01	MsG0380016879.01	0.812216	4.739554e-51	2.995646e-48
MsG0380014506.01	MsG0480018653.01	0.816536	5.258108e-52	3.735728e-49
MsG0380014506.01	MsG0480018985.01	0.819587	1.073864e-52	8.298489e-50
MsG0380014506.01	MsG0480019711.01	0.805756	1.144673e-49	6.106029e-47
MsG0380014506.01	MsG0480020832.01	0.806385	8.439978e-50	4.574685e-47
MsG0380014506.01	MsG0480020887.01	0.803480	3.416295e-49	1.718669e-46
MsG0380014506.01	MsG0480020935.01	-0.832354	9.915725e-56	1.105538e-52
MsG0380014506.01	MsG0480021305.01	0.815186	1.051819e-51	7.201326e-49
MsG0380014506.01	MsG0480023172.01	0.830887	2.280285e-55	2.434456e-52
MsG0380014506.01	MsG0480023251.01	0.803518	3.354958e-49	1.689471e-46
MsG0380014506.01	MsG0580024115.01	0.811259	7.656488e-51	4.717047e-48
MsG0380014506.01	MsG0580025332.01	0.802176	6.353327e-49	3.091401e-46
MsG0380014506.01	MsG0580025407.01	-0.835096	2.046696e-56	2.476987e-53
MsG0380014506.01	MsG0580025821.01	0.803396	3.556941e-49	1.785500e-46
MsG0380014506.01	MsG0580027320.01	0.800782	1.226002e-48	5.758446e-46
MsG0380014506.01	MsG0580027925.01	0.807385	5.186854e-50	2.885055e-47
MsG0380014506.01	MsG0580029236.01	0.808726	2.687751e-50	1.548319e-47
MsG0380014506.01	MsG0580030000.01	0.813501	2.478787e-51	1.621605e-48
MsG0380014506.01	MsG0680030313.01	0.810146	1.332819e-50	7.972461e-48
MsG0380014506.01	MsG0680030373.01	0.806582	7.671001e-50	4.178869e-47
MsG0380014506.01	MsG0680031108.01	0.814555	1.451346e-51	9.769577e-49
MsG0380014506.01	MsG0680035005.01	0.815575	8.617602e-52	5.963828e-49
MsG0380014506.01	MsG0780036517.01	0.825133	5.534945e-54	5.001685e-51
MsG0380014506.01	MsG0780036593.01	0.825018	5.890479e-54	5.305715e-51
MsG0380014506.01	MsG0780036596.01	0.818773	1.645262e-52	1.243045e-49
MsG0380014506.01	MsG0780036602.01	0.800500	1.399743e-48	6.527836e-46
MsG0380014506.01	MsG0780038378.01	0.810491	1.122420e-50	6.775356e-48
MsG0380014506.01	MsG0780039155.01	0.814200	1.739229e-51	1.159446e-48
MsG0380014506.01	MsG0780039443.01	0.821348	4.234225e-53	3.436233e-50
MsG0380014506.01	MsG0780040576.01	-0.807892	4.048592e-50	2.281719e-47
MsG0380014506.01	MsG0780041074.01	0.800083	1.701698e-48	7.852650e-46
MsG0380014506.01	MsG0780041634.01	0.806917	6.516671e-50	3.580893e-47
MsG0380014506.01	MsG0880041861.01	0.812743	3.636019e-51	2.330524e-48
MsG0380014506.01	MsG0880041864.01	0.800939	1.139214e-48	5.372450e-46
MsG0380014506.01	MsG0880042520.01	0.800637	1.312729e-48	6.143392e-46
MsG0380014506.01	MsG0880043157.01	0.842883	1.969557e-58	3.027866e-55
MsG0380014506.01	MsG0880043937.01	0.822095	2.844854e-53	2.357836e-50
MsG0380014506.01	MsG0880045235.01	0.801902	7.233297e-49	3.495218e-46
MsG0280007432.01	MsG0380014506.01	0.824684	7.064679e-54	6.302880e-51
MsG0280007955.01	MsG0380014506.01	0.820805	5.649614e-53	4.516207e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014506.01.T01	MTR_3g058610	87.391	230	23	2	4	228	1	229	9.82e-147	413
MsG0380014506.01.T01	MTR_8g075890	78.261	230	44	2	4	228	1	229	7.55e-133	378
MsG0380014506.01.T01	MTR_8g075830	77.391	230	46	2	4	228	1	229	2.18e-129	370
MsG0380014506.01.T01	MTR_5g022020	73.478	230	55	2	4	228	1	229	2.33e-121	349
MsG0380014506.01.T01	MTR_8g024120	36.667	240	130	6	1	228	1	230	1.24e-44	152
MsG0380014506.01.T01	MTR_7g062600	37.559	213	125	4	21	228	29	238	1.37e-41	145
MsG0380014506.01.T01	MTR_7g062550	37.559	213	125	4	21	228	38	247	1.73e-41	145
MsG0380014506.01.T01	MTR_3g092890	37.327	217	121	6	19	228	15	223	1.56e-40	142
MsG0380014506.01.T01	MTR_7g062580	37.089	213	126	4	21	228	33	242	1.71e-40	142
MsG0380014506.01.T01	MTR_7g062570	36.019	211	127	4	23	228	35	242	2.52e-40	141
MsG0380014506.01.T01	MTR_3g070860	33.182	220	139	3	16	227	23	242	1.23e-38	137
MsG0380014506.01.T01	MTR_7g068650	33.186	226	134	5	17	227	24	247	6.94e-38	135
MsG0380014506.01.T01	MTR_3g063180	32.870	216	130	4	23	228	25	235	1.98e-37	134
MsG0380014506.01.T01	MTR_5g082750	35.455	220	134	3	16	227	22	241	2.73e-37	134
MsG0380014506.01.T01	MTR_5g059130	34.703	219	129	5	17	226	18	231	4.75e-37	132
MsG0380014506.01.T01	MTR_7g045650	36.979	192	113	4	42	228	59	247	6.15e-37	132
MsG0380014506.01.T01	MTR_3g072820	32.569	218	133	4	18	226	17	229	1.08e-36	131
MsG0380014506.01.T01	MTR_5g059140	31.624	234	140	5	7	227	6	232	1.74e-36	131
MsG0380014506.01.T01	MTR_1g062110	33.772	228	121	7	14	228	50	260	6.18e-36	129
MsG0380014506.01.T01	MTR_1g062110	33.772	228	121	7	14	228	50	260	1.01e-35	130
MsG0380014506.01.T01	MTR_7g081710	32.420	219	138	6	17	228	23	238	1.18e-35	129
MsG0380014506.01.T01	MTR_4g015790	32.636	239	127	5	17	227	23	255	1.71e-35	129
MsG0380014506.01.T01	MTR_2g437380	33.333	219	134	5	18	228	27	241	2.73e-34	125
MsG0380014506.01.T01	MTR_5g011250	32.751	229	134	5	20	228	15	243	1.81e-33	123
MsG0380014506.01.T01	MTR_7g063730	30.870	230	149	4	6	228	25	251	7.19e-33	122
MsG0380014506.01.T01	MTR_7g016080	30.769	221	138	6	16	228	13	226	1.33e-31	118
MsG0380014506.01.T01	MTR_1g048940	28.139	231	148	6	5	228	16	235	1.80e-30	115
MsG0380014506.01.T01	MTR_3g026150	33.333	189	118	4	43	226	60	245	2.24e-30	114
MsG0380014506.01.T01	MTR_1g070120	30.303	231	135	8	9	228	11	226	4.30e-30	114
MsG0380014506.01.T01	MTR_4g117880	33.333	216	128	5	22	228	41	249	4.40e-30	115
MsG0380014506.01.T01	MTR_3g026150	33.333	189	118	4	43	226	60	245	6.80e-30	114
MsG0380014506.01.T01	MTR_7g016090	32.990	194	114	6	43	228	39	224	2.62e-29	112
MsG0380014506.01.T01	MTR_7g016090	32.990	194	114	6	43	228	41	226	2.71e-29	112
MsG0380014506.01.T01	MTR_5g055900	29.557	203	135	2	31	228	35	234	6.85e-29	111
MsG0380014506.01.T01	MTR_8g063070	31.651	218	113	4	33	228	51	254	1.14e-28	111
MsG0380014506.01.T01	MTR_1g070185	29.954	217	130	5	23	228	49	254	1.16e-28	111
MsG0380014506.01.T01	MTR_1g093140	30.729	192	123	2	43	228	73	260	2.28e-28	110
MsG0380014506.01.T01	MTR_7g102820	30.918	207	122	6	40	228	64	267	3.12e-28	110
MsG0380014506.01.T01	MTR_1g093110	30.729	192	123	2	43	228	70	257	3.36e-28	110
MsG0380014506.01.T01	MTR_8g074050	28.571	196	133	3	39	228	48	242	4.05e-28	109
MsG0380014506.01.T01	MTR_3g091350	35.025	197	111	7	43	228	59	249	4.33e-28	109
MsG0380014506.01.T01	MTR_8g064200	30.288	208	136	4	27	228	36	240	6.08e-28	108
MsG0380014506.01.T01	MTR_8g064200	30.288	208	136	4	27	228	41	245	6.33e-28	108
MsG0380014506.01.T01	MTR_3g091360	34.010	197	113	6	43	228	52	242	7.54e-28	108
MsG0380014506.01.T01	MTR_8g008930	31.034	203	126	4	34	228	53	249	9.18e-28	108
MsG0380014506.01.T01	MTR_0009s0480	30.303	198	130	2	36	228	39	233	1.55e-27	106
MsG0380014506.01.T01	MTR_5g048470	30.208	192	127	3	42	228	52	241	1.97e-27	107
MsG0380014506.01.T01	MTR_1g070135	29.091	220	140	6	18	228	14	226	2.05e-27	106
MsG0380014506.01.T01	MTR_5g032880	30.455	220	143	3	18	228	352	570	2.13e-27	110
MsG0380014506.01.T01	MTR_5g032880	30.769	221	133	6	18	228	14	224	4.06e-26	106
MsG0380014506.01.T01	MTR_5g055680	29.064	203	136	2	31	228	35	234	2.84e-27	107
MsG0380014506.01.T01	MTR_3g072810	32.287	223	131	6	15	226	13	226	3.10e-27	106
MsG0380014506.01.T01	MTR_4g087090	29.075	227	138	6	20	228	9	230	3.47e-27	107
MsG0380014506.01.T01	MTR_1g070135	29.091	220	140	6	18	228	14	226	4.38e-27	106
MsG0380014506.01.T01	MTR_0009s0480	30.303	198	130	2	36	228	39	233	4.89e-27	106
MsG0380014506.01.T01	MTR_1g033810	29.694	229	145	4	7	228	17	236	5.03e-27	106
MsG0380014506.01.T01	MTR_5g085330	35.106	188	115	3	44	228	6	189	5.08e-27	105
MsG0380014506.01.T01	MTR_3g083370	34.031	191	119	3	41	228	2	188	6.96e-27	103
MsG0380014506.01.T01	MTR_3g088565	32.161	199	110	5	43	228	3	189	8.17e-27	105
MsG0380014506.01.T01	MTR_1g093120	29.902	204	124	4	34	228	61	254	9.20e-27	106
MsG0380014506.01.T01	MTR_8g009080	32.812	192	119	3	43	228	94	281	1.83e-26	104
MsG0380014506.01.T01	MTR_8g009080	32.812	192	119	3	43	228	94	281	2.06e-26	104
MsG0380014506.01.T01	MTR_2g069060	31.633	196	124	3	39	228	23	214	2.19e-26	102
MsG0380014506.01.T01	MTR_3g083370	34.031	191	119	3	41	228	2	188	2.41e-26	103
MsG0380014506.01.T01	MTR_8g009080	32.812	192	119	3	43	228	94	281	2.63e-26	105
MsG0380014506.01.T01	MTR_8g074070	28.061	196	134	3	39	228	48	242	2.79e-26	104
MsG0380014506.01.T01	MTR_5g032870	29.545	220	145	3	18	228	14	232	3.77e-26	103
MsG0380014506.01.T01	MTR_0032s0040	32.143	196	114	4	43	228	70	256	4.40e-26	104
MsG0380014506.01.T01	MTR_5g048550	27.014	211	148	2	24	228	24	234	6.99e-26	103
MsG0380014506.01.T01	MTR_1g070080	29.091	220	141	5	18	228	13	226	8.08e-26	103
MsG0380014506.01.T01	MTR_2g069010	28.372	215	139	5	23	228	48	256	9.55e-26	103
MsG0380014506.01.T01	MTR_2g069060	31.633	196	124	3	39	228	45	236	9.97e-26	102
MsG0380014506.01.T01	MTR_5g048850	28.571	203	137	3	31	228	35	234	1.05e-25	101
MsG0380014506.01.T01	MTR_2g072890	29.592	196	130	4	39	228	48	241	1.25e-25	102
MsG0380014506.01.T01	MTR_6g015950	30.000	220	138	6	17	228	14	225	1.37e-25	102
MsG0380014506.01.T01	MTR_1g070085	31.455	213	135	5	23	228	18	226	1.45e-25	102
MsG0380014506.01.T01	MTR_1g070085	31.455	213	135	5	23	228	18	226	1.45e-25	102
MsG0380014506.01.T01	MTR_4g093840	31.646	237	140	8	7	228	23	252	1.86e-25	102
MsG0380014506.01.T01	MTR_3g117485	28.283	198	134	3	39	228	45	242	2.16e-25	102
MsG0380014506.01.T01	MTR_2g025120	31.937	191	123	3	41	228	2	188	2.38e-25	99.4
MsG0380014506.01.T01	MTR_7g056347	30.964	197	116	3	43	228	67	254	2.77e-25	102
MsG0380014506.01.T01	MTR_5g048850	28.571	203	137	3	31	228	35	234	2.85e-25	101
MsG0380014506.01.T01	MTR_3g117485	30.909	165	107	2	71	228	6	170	3.47e-25	100
MsG0380014506.01.T01	MTR_2g068950	30.612	196	118	5	43	228	63	250	3.89e-25	101
MsG0380014506.01.T01	MTR_5g065010	32.778	180	106	5	58	228	55	228	4.09e-25	101
MsG0380014506.01.T01	MTR_8g009160	30.928	194	121	4	43	228	60	248	4.26e-25	101
MsG0380014506.01.T01	MTR_3g117420	27.041	196	136	4	39	228	48	242	4.95e-25	101
MsG0380014506.01.T01	MTR_1g034140	29.515	227	136	6	19	228	4	223	7.85e-25	100
MsG0380014506.01.T01	MTR_8g009110	31.795	195	119	5	43	228	60	249	8.03e-25	100
MsG0380014506.01.T01	MTR_1g034060	28.085	235	139	6	19	228	4	233	8.29e-25	100
MsG0380014506.01.T01	MTR_2g025120	31.937	191	123	3	41	228	2	188	1.01e-24	99.8
MsG0380014506.01.T01	MTR_1g034120	28.085	235	139	6	19	228	4	233	1.05e-24	100
MsG0380014506.01.T01	MTR_2g069090	31.088	193	121	4	43	228	68	255	1.06e-24	100
MsG0380014506.01.T01	MTR_8g028435	30.244	205	124	7	34	228	53	248	1.09e-24	100
MsG0380014506.01.T01	MTR_4g087120	29.075	227	139	8	22	228	7	231	1.30e-24	100
MsG0380014506.01.T01	MTR_8g009090	31.707	205	121	6	34	228	53	248	1.38e-24	100
MsG0380014506.01.T01	MTR_0328s0030	28.079	203	138	2	31	228	33	232	4.99e-24	98.6
MsG0380014506.01.T01	MTR_4g024660	29.167	192	126	2	43	228	67	254	5.10e-24	98.6
MsG0380014506.01.T01	MTR_7g029655	31.250	192	119	4	43	228	67	251	6.56e-24	98.2
MsG0380014506.01.T01	MTR_2g072910	28.646	192	131	3	42	228	50	240	6.86e-24	96.7
MsG0380014506.01.T01	MTR_8g062600	30.208	192	124	2	43	228	67	254	7.12e-24	98.2
MsG0380014506.01.T01	MTR_2g069020	29.167	192	126	3	43	228	67	254	9.34e-24	97.8
MsG0380014506.01.T01	MTR_2g069020	29.167	192	126	3	43	228	67	254	1.37e-23	97.8
MsG0380014506.01.T01	MTR_5g055690	29.648	199	131	4	36	228	40	235	1.88e-23	95.5
MsG0380014506.01.T01	MTR_2g072910	28.646	192	131	3	42	228	50	240	2.29e-23	96.7
MsG0380014506.01.T01	MTR_2g068960	29.592	196	120	5	43	228	63	250	3.44e-23	96.3
MsG0380014506.01.T01	MTR_4g116010	27.604	192	128	3	43	228	50	236	4.17e-23	95.9
MsG0380014506.01.T01	MTR_5g055690	29.500	200	130	4	36	228	40	235	4.41e-23	95.9
MsG0380014506.01.T01	MTR_1g102070	31.034	203	121	7	42	228	58	257	5.05e-23	95.9
MsG0380014506.01.T01	MTR_2g069190	31.795	195	117	3	43	228	68	255	7.95e-23	95.5
MsG0380014506.01.T01	MTR_5g048740	29.648	199	131	3	36	228	38	233	1.12e-22	94.7
MsG0380014506.01.T01	MTR_5g055820	27.136	199	136	3	36	228	40	235	1.63e-22	94.4
MsG0380014506.01.T01	MTR_0009s0050	26.263	198	138	2	36	228	40	234	2.14e-22	94.0
MsG0380014506.01.T01	MTR_0009s0050	26.263	198	138	2	36	228	40	234	2.33e-22	94.0
MsG0380014506.01.T01	MTR_8g009170	28.205	195	134	3	39	228	56	249	2.71e-22	92.8
MsG0380014506.01.T01	MTR_8g006930	30.366	191	117	4	43	224	67	250	4.48e-22	93.2
MsG0380014506.01.T01	MTR_2g069210	29.016	193	125	3	43	228	64	251	4.54e-22	93.2
MsG0380014506.01.T01	MTR_5g048570	26.042	192	134	2	42	228	44	232	4.94e-22	92.8
MsG0380014506.01.T01	MTR_8g009170	28.205	195	134	3	39	228	56	249	5.44e-22	93.2
MsG0380014506.01.T01	MTR_2g069300	30.928	194	120	4	43	228	54	241	5.88e-22	92.8
MsG0380014506.01.T01	MTR_7g062560	29.952	207	137	4	22	228	41	239	8.29e-22	92.4
MsG0380014506.01.T01	MTR_7g105070	28.761	226	132	5	18	228	34	245	1.83e-21	91.7
MsG0380014506.01.T01	MTR_5g055800	26.214	206	138	3	31	228	35	234	2.31e-21	91.3
MsG0380014506.01.T01	MTR_8g041620	29.167	216	137	7	23	228	48	257	2.61e-21	91.3
MsG0380014506.01.T01	MTR_4g087100	27.391	230	145	7	19	228	4	231	3.49e-21	90.5
MsG0380014506.01.T01	MTR_7g078010	30.159	189	120	4	43	224	67	250	3.73e-21	89.7
MsG0380014506.01.T01	MTR_1g043810	30.769	195	119	4	43	228	54	241	4.57e-21	90.1
MsG0380014506.01.T01	MTR_1g043810	30.769	195	119	4	43	228	54	241	4.96e-21	90.1
MsG0380014506.01.T01	MTR_2g068840	29.534	193	125	5	42	228	54	241	5.00e-21	90.5
MsG0380014506.01.T01	MTR_7g078010	30.159	189	120	4	43	224	67	250	8.24e-21	89.7
MsG0380014506.01.T01	MTR_4g119410	27.128	188	127	3	43	224	67	250	1.05e-20	89.7
MsG0380014506.01.T01	MTR_1g043760	30.366	191	124	2	43	228	54	240	1.47e-20	89.0
MsG0380014506.01.T01	MTR_4g087140	26.840	231	146	7	19	228	4	232	1.69e-20	88.6
MsG0380014506.01.T01	MTR_1g043770	30.653	199	121	3	39	228	49	239	2.12e-20	87.8
MsG0380014506.01.T01	MTR_8g041600	27.523	218	138	6	23	228	48	257	2.26e-20	87.8
MsG0380014506.01.T01	MTR_7g056393	29.101	189	122	3	43	224	67	250	2.47e-20	88.6
MsG0380014506.01.T01	MTR_1g043770	31.156	199	120	4	39	228	49	239	2.90e-20	88.2
MsG0380014506.01.T01	MTR_8g074070	28.205	195	116	5	39	228	48	223	3.65e-20	87.4
MsG0380014506.01.T01	MTR_8g041600	27.523	218	138	6	23	228	48	257	4.49e-20	87.8
MsG0380014506.01.T01	MTR_1g011580	29.778	225	132	7	14	228	37	245	5.21e-20	87.4
MsG0380014506.01.T01	MTR_6g464620	31.818	176	108	5	65	228	87	262	9.90e-20	87.0
MsG0380014506.01.T01	MTR_4g087110	27.313	227	143	6	22	228	7	231	1.31e-19	86.3
MsG0380014506.01.T01	MTR_1g043775	30.256	195	120	4	43	228	54	241	1.55e-19	85.5
MsG0380014506.01.T01	MTR_1g043775	30.256	195	120	4	43	228	54	241	1.67e-19	85.9
MsG0380014506.01.T01	MTR_8g033380	29.060	234	142	10	12	228	25	251	5.46e-19	84.7
MsG0380014506.01.T01	MTR_3g026150	33.577	137	86	2	95	226	6	142	5.55e-19	83.2
MsG0380014506.01.T01	MTR_8g009150	28.649	185	120	4	43	219	60	240	7.06e-19	84.3
MsG0380014506.01.T01	MTR_2g102570	29.143	175	112	5	65	228	66	239	1.51e-18	83.6
MsG0380014506.01.T01	MTR_2g437380	34.043	141	88	2	93	228	7	147	1.95e-18	82.0
MsG0380014506.01.T01	MTR_4g115990	27.919	197	124	4	33	228	36	215	1.14e-17	80.5
MsG0380014506.01.T01	MTR_6g092620	27.320	194	125	5	43	228	3	188	2.56e-17	79.3
MsG0380014506.01.T01	MTR_2g068800	27.660	188	116	5	42	228	54	222	3.11e-17	79.0
MsG0380014506.01.T01	MTR_1g081840	28.571	203	126	6	42	228	52	251	5.18e-17	79.3
MsG0380014506.01.T01	MTR_1g032140	30.653	199	121	5	38	228	61	250	5.63e-17	79.0
MsG0380014506.01.T01	MTR_7g451860	27.919	197	125	5	42	228	40	229	6.43e-17	78.6
MsG0380014506.01.T01	MTR_7g047670	27.919	197	125	5	42	228	40	229	6.43e-17	78.6
MsG0380014506.01.T01	MTR_4g087130	27.679	224	141	7	22	226	7	228	2.27e-16	77.4
MsG0380014506.01.T01	MTR_3g096500	26.570	207	121	5	44	228	67	264	2.61e-16	77.4
MsG0380014506.01.T01	MTR_1g032250	28.141	199	130	4	36	228	66	257	6.83e-16	75.9
MsG0380014506.01.T01	MTR_1g086550	27.119	236	117	8	21	226	7	217	7.24e-16	75.9
MsG0380014506.01.T01	MTR_1g032220	27.919	197	129	4	38	228	68	257	2.68e-15	74.3
MsG0380014506.01.T01	MTR_2g070870	26.857	175	109	6	65	226	42	210	7.99e-15	72.8
MsG0380014506.01.T01	MTR_2g019370	28.934	197	118	7	48	226	25	217	1.27e-14	72.0
MsG0380014506.01.T01	MTR_7g056370	28.767	146	94	2	44	183	47	188	2.31e-14	70.1
MsG0380014506.01.T01	MTR_8g009120	26.702	191	122	4	43	228	60	237	2.54e-14	71.2
MsG0380014506.01.T01	MTR_7g102720	26.601	203	125	6	37	228	31	220	4.86e-14	70.5
MsG0380014506.01.T01	MTR_1g070100	33.333	102	67	1	127	228	44	144	4.98e-14	69.7
MsG0380014506.01.T01	MTR_1g070085	33.333	102	67	1	127	228	48	148	7.44e-14	69.3
MsG0380014506.01.T01	MTR_3g045230	27.000	200	116	6	43	228	56	239	7.74e-14	70.1
MsG0380014506.01.T01	MTR_2g083000	26.943	193	129	3	42	228	32	218	8.39e-14	69.7
MsG0380014506.01.T01	MTR_8g469400	26.866	201	106	5	43	228	67	241	9.53e-14	69.7
MsG0380014506.01.T01	MTR_7g056353	34.951	103	63	1	126	228	130	228	2.35e-13	68.9
MsG0380014506.01.T01	MTR_3g043900	25.871	201	116	7	43	228	56	238	2.35e-13	68.6
MsG0380014506.01.T01	MTR_5g005570	26.154	195	128	5	42	228	36	222	2.50e-13	68.6
MsG0380014506.01.T01	MTR_4g074130	24.378	201	144	5	33	228	30	227	3.43e-13	68.2
MsG0380014506.01.T01	MTR_2g083030	23.913	230	151	6	8	228	9	223	3.65e-13	67.8
MsG0380014506.01.T01	MTR_3g040410	25.907	193	131	6	43	228	6	193	8.72e-13	66.6
MsG0380014506.01.T01	MTR_4g123020	25.000	208	136	8	31	226	6	205	2.28e-12	65.5
MsG0380014506.01.T01	MTR_0056s0160	27.679	112	80	1	118	228	8	119	2.48e-12	64.7
MsG0380014506.01.T01	MTR_2g033270	23.497	183	127	5	53	226	23	201	2.94e-12	65.1
MsG0380014506.01.T01	MTR_8g461330	24.519	208	118	9	42	226	26	217	2.00e-11	62.8
MsG0380014506.01.T01	MTR_4g094900	26.738	187	115	6	60	228	33	215	3.01e-11	61.6
MsG0380014506.01.T01	MTR_8g102600	24.479	192	109	6	63	226	27	210	3.03e-11	62.4
MsG0380014506.01.T01	MTR_0009s0050	24.812	133	95	1	101	228	4	136	6.69e-11	60.8
MsG0380014506.01.T01	MTR_0009s0050	24.812	133	95	1	101	228	4	136	6.91e-11	60.8
MsG0380014506.01.T01	MTR_5g025090	22.222	189	133	5	41	226	3	180	7.69e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380014506.01.T01	AT3G51240	70.870	230	60	3	4	228	1	228	9.65e-118	340
MsG0380014506.01.T01	AT3G51240	73.611	144	33	1	90	228	1	144	1.45e-75	229
MsG0380014506.01.T01	AT5G24530	36.199	221	126	6	15	228	11	223	1.02e-43	150
MsG0380014506.01.T01	AT4G10490	35.088	228	133	5	7	228	12	230	1.12e-41	145
MsG0380014506.01.T01	AT4G10500	33.333	216	135	4	19	228	20	232	5.07e-39	138
MsG0380014506.01.T01	AT4G16330	37.245	196	106	6	43	228	67	255	1.26e-37	135
MsG0380014506.01.T01	AT2G38240	36.199	221	124	7	18	227	22	236	4.58e-37	133
MsG0380014506.01.T01	AT5G05600	32.727	220	138	4	17	227	36	254	8.40e-36	128
MsG0380014506.01.T01	AT5G05600	32.727	220	138	4	17	227	36	254	2.53e-35	129
MsG0380014506.01.T01	AT3G11180	33.032	221	134	4	18	227	66	283	1.62e-34	127
MsG0380014506.01.T01	AT3G11180	33.032	221	134	4	18	227	66	283	1.77e-34	127
MsG0380014506.01.T01	AT5G08640	33.333	213	128	4	23	226	23	230	3.50e-34	125
MsG0380014506.01.T01	AT5G08640	33.333	213	128	4	23	226	23	230	3.50e-34	125
MsG0380014506.01.T01	AT3G19000	30.435	230	140	4	19	228	4	233	2.07e-33	122
MsG0380014506.01.T01	AT3G55970	32.735	223	136	5	18	227	24	245	2.09e-33	122
MsG0380014506.01.T01	AT4G22880	32.828	198	122	4	42	228	46	243	6.06e-33	122
MsG0380014506.01.T01	AT4G22880	32.828	198	122	4	42	228	46	243	6.06e-33	122
MsG0380014506.01.T01	AT4G22880	32.828	198	122	4	42	228	46	243	6.06e-33	122
MsG0380014506.01.T01	AT3G55970	32.735	223	136	5	18	227	24	245	6.77e-33	122
MsG0380014506.01.T01	AT3G19000	30.435	230	140	4	19	228	4	233	1.35e-32	121
MsG0380014506.01.T01	AT3G19010	32.301	226	136	5	19	228	4	228	1.52e-32	120
MsG0380014506.01.T01	AT5G63590	34.328	201	114	4	37	226	8	201	3.90e-32	119
MsG0380014506.01.T01	AT3G19010	32.301	226	136	5	19	228	4	228	4.07e-32	120
MsG0380014506.01.T01	AT3G19010	32.301	226	136	5	19	228	4	228	4.07e-32	120
MsG0380014506.01.T01	AT3G60290	31.481	216	137	5	21	228	29	241	2.03e-31	118
MsG0380014506.01.T01	AT2G44800	30.769	221	130	5	15	228	37	241	5.86e-31	117
MsG0380014506.01.T01	AT1G78550	27.753	227	156	3	9	228	17	242	2.50e-30	115
MsG0380014506.01.T01	AT5G63600	32.812	192	115	6	42	227	32	215	8.96e-30	113
MsG0380014506.01.T01	AT5G63600	32.812	192	115	6	42	227	32	215	9.31e-30	113
MsG0380014506.01.T01	AT5G07480	26.695	236	153	6	1	228	12	235	6.53e-29	111
MsG0380014506.01.T01	AT3G21420	30.631	222	143	5	17	228	26	246	6.71e-29	111
MsG0380014506.01.T01	AT5G63595	32.212	208	115	6	25	227	5	191	7.35e-29	110
MsG0380014506.01.T01	AT1G17020	29.362	235	152	5	1	228	17	244	3.70e-28	109
MsG0380014506.01.T01	AT5G59540	32.000	200	120	4	39	228	57	250	4.78e-28	107
MsG0380014506.01.T01	AT5G63580	33.696	184	106	5	43	217	19	195	6.64e-28	106
MsG0380014506.01.T01	AT5G54000	31.250	176	114	3	58	227	62	236	8.11e-28	108
MsG0380014506.01.T01	AT5G63580	33.696	184	106	5	43	217	19	195	8.34e-28	106
MsG0380014506.01.T01	AT5G59540	32.000	200	120	4	39	228	57	250	1.52e-27	108
MsG0380014506.01.T01	AT2G36690	31.841	201	117	8	40	228	58	250	3.05e-27	107
MsG0380014506.01.T01	AT2G36690	31.841	201	117	8	40	228	58	250	3.05e-27	107
MsG0380014506.01.T01	AT1G04380	33.163	196	118	4	39	228	41	229	4.85e-27	105
MsG0380014506.01.T01	AT1G04380	33.163	196	118	4	39	228	41	229	1.15e-26	105
MsG0380014506.01.T01	AT4G16330	36.913	149	84	4	90	228	1	149	1.54e-26	103
MsG0380014506.01.T01	AT1G49390	28.646	192	131	2	42	227	44	235	2.71e-26	104
MsG0380014506.01.T01	AT4G25300	27.778	234	156	5	1	228	16	242	4.12e-26	104
MsG0380014506.01.T01	AT5G20550	29.469	207	125	6	37	227	34	235	4.89e-26	103
MsG0380014506.01.T01	AT1G06620	32.487	197	121	3	39	228	58	249	5.03e-26	102
MsG0380014506.01.T01	AT5G43440	30.256	195	126	4	40	228	59	249	7.43e-26	102
MsG0380014506.01.T01	AT1G55290	31.472	197	120	6	39	228	58	246	1.44e-25	102
MsG0380014506.01.T01	AT1G03410	32.642	193	119	2	43	228	57	245	1.60e-25	102
MsG0380014506.01.T01	AT1G06620	32.487	197	121	3	39	228	58	249	1.70e-25	102
MsG0380014506.01.T01	AT5G43450	32.828	198	115	5	40	228	58	246	1.84e-25	101
MsG0380014506.01.T01	AT5G43440	30.256	195	126	4	40	228	59	249	2.04e-25	102
MsG0380014506.01.T01	AT5G59530	31.000	200	123	4	39	228	54	248	2.71e-25	102
MsG0380014506.01.T01	AT1G03410	32.642	193	119	2	43	228	94	282	2.85e-25	102
MsG0380014506.01.T01	AT5G43450	32.828	198	115	5	40	228	58	246	4.59e-25	101
MsG0380014506.01.T01	AT1G03400	30.208	192	116	3	43	228	56	235	7.82e-25	100
MsG0380014506.01.T01	AT4G25310	30.275	218	141	6	17	228	27	239	1.28e-24	100
MsG0380014506.01.T01	AT1G05010	33.161	193	118	5	41	228	2	188	1.29e-24	99.8
MsG0380014506.01.T01	AT1G03400	30.208	192	116	3	43	228	56	235	1.95e-24	100
MsG0380014506.01.T01	AT1G17010	29.016	193	130	4	42	228	53	244	4.52e-24	98.6
MsG0380014506.01.T01	AT1G60980	32.843	204	119	7	42	228	56	258	5.09e-24	98.6
MsG0380014506.01.T01	AT3G13610	30.049	203	124	7	36	228	52	246	5.95e-24	98.2
MsG0380014506.01.T01	AT1G77330	30.198	202	112	6	43	228	3	191	7.65e-24	97.1
MsG0380014506.01.T01	AT1G04350	31.795	195	115	5	43	228	58	243	9.28e-24	97.8
MsG0380014506.01.T01	AT3G19010	28.761	226	114	6	19	228	4	198	1.38e-23	96.7
MsG0380014506.01.T01	AT1G06650	30.198	202	110	4	43	227	64	251	1.62e-23	96.7
MsG0380014506.01.T01	AT5G20400	27.551	196	128	4	42	227	44	235	2.05e-23	96.7
MsG0380014506.01.T01	AT1G06650	31.188	202	108	4	43	227	64	251	2.83e-23	96.7
MsG0380014506.01.T01	AT3G61400	33.520	179	106	5	58	228	80	253	2.88e-23	95.5
MsG0380014506.01.T01	AT3G61400	33.520	179	106	5	58	228	80	253	5.51e-23	95.9
MsG0380014506.01.T01	AT4G21690	29.146	199	120	4	43	228	47	237	7.46e-23	95.1
MsG0380014506.01.T01	AT5G54000	30.128	156	103	2	78	227	1	156	1.24e-22	93.2
MsG0380014506.01.T01	AT1G78550	29.560	159	107	1	75	228	6	164	5.27e-22	91.7
MsG0380014506.01.T01	AT2G30830	29.469	207	131	5	29	228	44	242	5.46e-22	92.8
MsG0380014506.01.T01	AT1G06640	31.088	193	120	5	43	227	64	251	6.24e-22	91.7
MsG0380014506.01.T01	AT1G15550	27.136	199	128	4	39	228	53	243	7.24e-22	92.8
MsG0380014506.01.T01	AT1G80330	27.236	246	153	6	1	228	1	238	8.58e-22	92.4
MsG0380014506.01.T01	AT1G06640	30.208	192	123	4	43	227	64	251	1.05e-21	91.7
MsG0380014506.01.T01	AT1G06640	30.208	192	123	4	43	227	64	251	1.43e-21	92.0
MsG0380014506.01.T01	AT4G25420	27.638	199	132	4	42	228	60	258	3.36e-21	90.1
MsG0380014506.01.T01	AT1G62380	28.125	192	131	3	40	228	4	191	5.37e-21	89.7
MsG0380014506.01.T01	AT4G25420	27.638	199	132	4	42	228	60	258	8.50e-21	89.7
MsG0380014506.01.T01	AT1G49390	28.846	156	105	2	78	227	1	156	9.13e-21	88.2
MsG0380014506.01.T01	AT5G07200	28.713	202	128	5	42	228	57	257	1.10e-20	89.7
MsG0380014506.01.T01	AT3G12900	31.250	192	115	7	46	228	59	242	3.35e-20	88.2
MsG0380014506.01.T01	AT1G06645	31.579	190	106	5	53	227	81	261	3.99e-20	88.2
MsG0380014506.01.T01	AT5G43935	29.412	187	99	7	42	219	18	180	8.40e-20	85.9
MsG0380014506.01.T01	AT1G12010	27.083	192	133	3	40	228	4	191	8.69e-20	86.3
MsG0380014506.01.T01	AT2G30840	29.381	194	125	5	43	228	57	246	8.74e-20	87.0
MsG0380014506.01.T01	AT2G30840	29.381	194	125	5	43	228	57	246	8.90e-20	86.3
MsG0380014506.01.T01	AT2G30840	29.381	194	125	5	43	228	57	246	8.94e-20	87.0
MsG0380014506.01.T01	AT2G25450	27.604	192	129	3	43	228	55	242	3.31e-19	85.1
MsG0380014506.01.T01	AT1G80340	27.363	201	125	6	39	228	46	236	9.65e-19	84.0
MsG0380014506.01.T01	AT3G50210	30.808	198	113	6	52	228	27	221	5.38e-17	79.0
MsG0380014506.01.T01	AT3G50210	30.808	198	113	6	52	228	27	221	5.38e-17	79.0
MsG0380014506.01.T01	AT3G50210	30.808	198	113	6	52	228	27	221	5.38e-17	79.0
MsG0380014506.01.T01	AT5G51810	28.788	198	125	6	43	228	63	256	7.06e-17	78.2
MsG0380014506.01.T01	AT5G51810	28.788	198	125	6	43	228	63	256	1.31e-16	78.2
MsG0380014506.01.T01	AT5G12270	26.244	221	143	6	17	228	31	240	1.58e-16	77.8
MsG0380014506.01.T01	AT1G44090	29.146	199	129	6	42	228	62	260	1.74e-16	77.8
MsG0380014506.01.T01	AT2G19590	28.796	191	125	6	42	228	10	193	2.23e-16	77.0
MsG0380014506.01.T01	AT5G07480	33.010	103	67	2	127	228	25	126	4.29e-15	72.4
MsG0380014506.01.T01	AT3G49630	25.946	185	120	5	60	228	34	217	2.49e-14	71.2
MsG0380014506.01.T01	AT3G49630	25.946	185	120	5	60	228	30	213	2.92e-14	71.2
MsG0380014506.01.T01	AT1G78440	25.140	179	113	6	65	226	32	206	4.39e-13	67.8
MsG0380014506.01.T01	AT4G21200	25.510	196	127	6	42	228	41	226	4.51e-13	67.8
MsG0380014506.01.T01	AT1G30040	26.432	227	140	9	13	226	4	216	5.81e-13	67.0
MsG0380014506.01.T01	AT3G49620	26.203	187	117	6	60	228	59	242	6.53e-13	67.4
MsG0380014506.01.T01	AT1G30040	26.432	227	140	9	13	226	4	216	1.07e-12	66.6
MsG0380014506.01.T01	AT4G25310	27.684	177	118	5	17	188	27	198	2.24e-12	65.9
MsG0380014506.01.T01	AT1G47990	27.451	204	118	7	40	226	12	202	2.37e-12	65.5
MsG0380014506.01.T01	AT1G02400	26.230	183	117	7	58	226	34	212	2.94e-11	62.0
MsG0380014506.01.T01	AT1G02400	25.824	182	119	6	58	226	34	212	3.76e-11	62.0
MsG0380014506.01.T01	AT1G14130	28.191	188	120	7	43	226	9	185	7.08e-11	61.2

Find 48 sgRNAs with CRISPR-Local

Find 135 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAATAATCTCTTTCACTAAT+TGG	0.140674	3:+55855332	None:intergenic
GTTACCTCTTTCCATCCTTC+TGG	0.168829	3:+55855293	None:intergenic
AGGTCAGGTTGAGGGCATTT+TGG	0.233663	3:+55855134	None:intergenic
GACAAAAGCAAGTGTTGATA+TGG	0.269449	3:-55855183	MsG0380014506.01.T01:CDS
AACTGATTGTAAGCACCTTT+TGG	0.286081	3:+55856755	None:intergenic
TGACATGTCTGGTGGTAAAA+AGG	0.287392	3:-55856522	MsG0380014506.01.T01:CDS
TTGCAAAAGCTTGCGAGAAC+TGG	0.289000	3:-55856652	MsG0380014506.01.T01:CDS
TTCCATCCTTCTGGGTTGTC+TGG	0.301415	3:+55855302	None:intergenic
TTACCTCTTTCCATCCTTCT+GGG	0.315935	3:+55855294	None:intergenic
AATAATCTCTTTCACTAATT+GGG	0.336585	3:+55855333	None:intergenic
GCCACCAACGTCGTCGATTC+CGG	0.344846	3:+55856700	None:intergenic
ATTCCGGCTAGAGAAATAAT+TGG	0.388428	3:+55856716	None:intergenic
CACTCGGGTCTAGTTTCATC+AGG	0.423701	3:-55856793	MsG0380014506.01.T01:CDS
TTGAAACGACACACTGATCC+TGG	0.432012	3:-55855101	MsG0380014506.01.T01:CDS
TGCCATCAGAAGAGAAGCTT+CGG	0.444347	3:-55856547	MsG0380014506.01.T01:CDS
GAGGTGTTATCTGAGGCTAT+GGG	0.447873	3:-55855224	MsG0380014506.01.T01:CDS
AAGCTTCGGTTTGACATGTC+TGG	0.449959	3:-55856533	MsG0380014506.01.T01:CDS
TGAGGTGTTATCTGAGGCTA+TGG	0.451886	3:-55855225	MsG0380014506.01.T01:CDS
ATCTTCCAAGTTGTTGATCA+TGG	0.452418	3:-55856626	MsG0380014506.01.T01:CDS
AGGGAAAAGAGATGAATGAT+TGG	0.453027	3:-55855382	MsG0380014506.01.T01:CDS
CCTCAACCTGACCTTACTCT+TGG	0.460844	3:-55855125	MsG0380014506.01.T01:CDS
TGCAAAAGCTTGCGAGAACT+GGG	0.464107	3:-55856651	MsG0380014506.01.T01:CDS
CAAGAGTAAGGTCAGGTTGA+GGG	0.483110	3:+55855126	None:intergenic
ATTCCAATTATTTCTCTAGC+CGG	0.488494	3:-55856719	MsG0380014506.01.T01:CDS
CCACGCCATGATCAACAACT+TGG	0.500880	3:+55856621	None:intergenic
GACGAAAGCACTCGTCCAAA+AGG	0.503109	3:-55856770	MsG0380014506.01.T01:CDS
TTTAACATGCAAGTTGTTTG+AGG	0.504827	3:-55855243	MsG0380014506.01.T01:CDS
TTAGTGAAAGAGATTATTCA+AGG	0.506390	3:-55855328	MsG0380014506.01.T01:CDS
GTCGTTTCAAGCCAAGAGTA+AGG	0.537782	3:+55855114	None:intergenic
AACACCAGAGTGATTGTGCC+AGG	0.538136	3:+55855083	None:intergenic
GCCGGAATCGACGACGTTGG+TGG	0.540536	3:-55856701	MsG0380014506.01.T01:CDS
TTCAAGCCAAGAGTAAGGTC+AGG	0.545172	3:+55855119	None:intergenic
AACCGAAGCTTCTCTTCTGA+TGG	0.548453	3:+55856545	None:intergenic
CCAAGAGTAAGGTCAGGTTG+AGG	0.550579	3:+55855125	None:intergenic
GGCCAGACAACCCAGAAGGA+TGG	0.560210	3:-55855304	MsG0380014506.01.T01:CDS
TGATATGGTTCAAAAGATTG+TGG	0.575423	3:-55855168	MsG0380014506.01.T01:CDS
GTTGTTTGAGGTGTTATCTG+AGG	0.584471	3:-55855231	MsG0380014506.01.T01:CDS
TGATCCTGGCACAATCACTC+TGG	0.585677	3:-55855087	MsG0380014506.01.T01:CDS
CCAAGTTGTTGATCATGGCG+TGG	0.589940	3:-55856621	MsG0380014506.01.T01:CDS
AGGTGTTATCTGAGGCTATG+GGG	0.601581	3:-55855223	MsG0380014506.01.T01:CDS
CAACCCAGAAGGATGGAAAG+AGG	0.626539	3:-55855297	MsG0380014506.01.T01:CDS
CTTCGGTTTGACATGTCTGG+TGG	0.633367	3:-55856530	MsG0380014506.01.T01:CDS
AGGTGGCCAGACAACCCAGA+AGG	0.647074	3:-55855308	MsG0380014506.01.T01:CDS
CTAGCCGGAATCGACGACGT+TGG	0.685965	3:-55856704	MsG0380014506.01.T01:CDS
GTGAAAGAGATTATTCAAGG+TGG	0.692405	3:-55855325	MsG0380014506.01.T01:CDS
ACTCGGGTCTAGTTTCATCA+GGG	0.695795	3:-55856792	MsG0380014506.01.T01:CDS
GCAAAAGCTTGCGAGAACTG+GGG	0.707380	3:-55856650	MsG0380014506.01.T01:CDS
GGTCGCAAATCTCTTCTCTG+CGG	0.752904	3:+55856678	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAATAAACATTGAATTATA+AGG	-	Chr3:55856388-55856407	MsG0380014506.01.T01:intron	10.0%
!!!	ATTCTAAAATTTTCTTTTAT+TGG	+	Chr3:55856470-55856489	None:intergenic	10.0%
!!!	GAAAAAAATTATTTTTGAAT+TGG	-	Chr3:55856335-55856354	MsG0380014506.01.T01:intron	10.0%
!!	AAAATGATATCAATATTTAC+AGG	-	Chr3:55856541-55856560	MsG0380014506.01.T01:CDS	15.0%
!!	AAATGATATCAATATTTACA+GGG	-	Chr3:55856542-55856561	MsG0380014506.01.T01:CDS	15.0%
!!	ACAATATTAATCAAAACTAA+TGG	+	Chr3:55855948-55855967	None:intergenic	15.0%
!!	TTTGATTAATATTGTGTATT+TGG	-	Chr3:55855953-55855972	MsG0380014506.01.T01:intron	15.0%
!!!	AAATTTTCTTTTATTGGTAA+AGG	+	Chr3:55856464-55856483	None:intergenic	15.0%
!!	AAATTGATAAATACAACTCA+AGG	+	Chr3:55855778-55855797	None:intergenic	20.0%
!!	AATAATCTCTTTCACTAATT+GGG	+	Chr3:55856613-55856632	None:intergenic	20.0%
!!	ATATCATTAATTGATTGATG+TGG	-	Chr3:55855864-55855883	MsG0380014506.01.T01:intron	20.0%
!!	CATTCAAAAATATTTACACA+TGG	-	Chr3:55856437-55856456	MsG0380014506.01.T01:intron	20.0%
!!!	AACTGATTCATCTTTAAAAT+TGG	+	Chr3:55856288-55856307	None:intergenic	20.0%
!!!	ATTTTAAAGATGAATCAGTT+AGG	-	Chr3:55856288-55856307	MsG0380014506.01.T01:intron	20.0%
!!!	CACAAAATAAGTTCTAATTA+TGG	-	Chr3:55856023-55856042	MsG0380014506.01.T01:intron	20.0%
!!!	CATGTGTAAATATTTTTGAA+TGG	+	Chr3:55856439-55856458	None:intergenic	20.0%
!	AACAAGTGATAACTACAAAA+TGG	+	Chr3:55855631-55855650	None:intergenic	25.0%
!	ATTAATCAAAACTAATGGAG+TGG	+	Chr3:55855943-55855962	None:intergenic	25.0%
!	GAATAATCTCTTTCACTAAT+TGG	+	Chr3:55856614-55856633	None:intergenic	25.0%
!	TGAGTTAGTTGAAAACATAA+TGG	-	Chr3:55856260-55856279	MsG0380014506.01.T01:intron	25.0%
!	TGTTTATTATTTCGAATAGC+TGG	+	Chr3:55856378-55856397	None:intergenic	25.0%
!	TTAATCAAAACTAATGGAGT+GGG	+	Chr3:55855942-55855961	None:intergenic	25.0%
!	TTAGTGAAAGAGATTATTCA+AGG	-	Chr3:55856615-55856634	MsG0380014506.01.T01:CDS	25.0%
!!	AAAATACTCGTTCTAAACAT+GGG	-	Chr3:55855651-55855670	MsG0380014506.01.T01:intron	25.0%
!!	AAAGAACTCTTTAGAAAAAC+TGG	+	Chr3:55855372-55855391	None:intergenic	25.0%
!!	AATAAGTTCTAATTATGGAC+AGG	-	Chr3:55856028-55856047	MsG0380014506.01.T01:intron	25.0%
!!	ATAAGTTCTAATTATGGACA+GGG	-	Chr3:55856029-55856048	MsG0380014506.01.T01:intron	25.0%
!!	TAAAATACTCGTTCTAAACA+TGG	-	Chr3:55855650-55855669	MsG0380014506.01.T01:intron	25.0%
!!!	TGTGTATTTGGTTCAATTTT+CGG	-	Chr3:55855965-55855984	MsG0380014506.01.T01:intron	25.0%
	AAAGATGAATCAGTTAGGTT+GGG	-	Chr3:55856293-55856312	MsG0380014506.01.T01:intron	30.0%
	CGGATGACTAAAAAATAAGT+TGG	-	Chr3:55855674-55855693	MsG0380014506.01.T01:intron	30.0%
	TAAAGATGAATCAGTTAGGT+TGG	-	Chr3:55856292-55856311	MsG0380014506.01.T01:intron	30.0%
	TGATATGGTTCAAAAGATTG+TGG	-	Chr3:55856775-55856794	MsG0380014506.01.T01:CDS	30.0%
	TTTAACATGCAAGTTGTTTG+AGG	-	Chr3:55856700-55856719	MsG0380014506.01.T01:CDS	30.0%
!	ACACCTTCTAAAAACTAAGT+GGG	+	Chr3:55855739-55855758	None:intergenic	30.0%
!	ATTCCAATTATTTCTCTAGC+CGG	-	Chr3:55855224-55855243	MsG0380014506.01.T01:CDS	30.0%
!	CTAACTTTTCATGCAAACAA+TGG	-	Chr3:55855088-55855107	MsG0380014506.01.T01:CDS	30.0%
!	GTAGACTTTTCTCTTCAAAT+GGG	-	Chr3:55856091-55856110	MsG0380014506.01.T01:intron	30.0%
!	GTATTTTGCGAGTTACATTT+TGG	-	Chr3:55855521-55855540	MsG0380014506.01.T01:intron	30.0%
!	TTCACACACTTGCATTTTTA+GGG	-	Chr3:55855497-55855516	MsG0380014506.01.T01:intron	30.0%
!	TTTCACACACTTGCATTTTT+AGG	-	Chr3:55855496-55855515	MsG0380014506.01.T01:intron	30.0%
!!	TATTTTTGAATGGCTCATAC+TGG	+	Chr3:55856429-55856448	None:intergenic	30.0%
	ACACTTTCTCTTCAAATGAG+AGG	-	Chr3:55856149-55856168	MsG0380014506.01.T01:intron	35.0%
	ACTTCCACGTAAAAACTAGT+TGG	+	Chr3:55855588-55855607	None:intergenic	35.0%
	AGAGGACTAGATTTCTCAAA+TGG	-	Chr3:55856167-55856186	MsG0380014506.01.T01:intron	35.0%
	AGGGAAAAGAGATGAATGAT+TGG	-	Chr3:55856561-55856580	MsG0380014506.01.T01:CDS	35.0%
	ATCTTCCAAGTTGTTGATCA+TGG	-	Chr3:55855317-55855336	MsG0380014506.01.T01:CDS	35.0%
	ATTCCGGCTAGAGAAATAAT+TGG	+	Chr3:55855230-55855249	None:intergenic	35.0%
	GAGGACTAGATTTCTCAAAT+GGG	-	Chr3:55856168-55856187	MsG0380014506.01.T01:intron	35.0%
	GTATTCTAGCAAATGTCTGT+AGG	-	Chr3:55855698-55855717	MsG0380014506.01.T01:intron	35.0%
	GTGAAAGAGATTATTCAAGG+TGG	-	Chr3:55856618-55856637	MsG0380014506.01.T01:CDS	35.0%
	TTACCTCAGAAAAACACACT+CGG	-	Chr3:55855134-55855153	MsG0380014506.01.T01:CDS	35.0%
!	AAATAATCGAGAGTTTTCGC+TGG	+	Chr3:55855116-55855135	None:intergenic	35.0%
!	AACTGATTGTAAGCACCTTT+TGG	+	Chr3:55855191-55855210	None:intergenic	35.0%
!	AAGATGAATCAGTTAGGTTG+GGG	-	Chr3:55856294-55856313	MsG0380014506.01.T01:intron	35.0%
!	CACACCTTCTAAAAACTAAG+TGG	+	Chr3:55855740-55855759	None:intergenic	35.0%
!	CGTAGACTTTTCTCTTCAAA+TGG	-	Chr3:55856090-55856109	MsG0380014506.01.T01:intron	35.0%
!	CTCATTTGAAGAGAAAGTGT+TGG	+	Chr3:55856149-55856168	None:intergenic	35.0%
!!	ACACCCACTTAGTTTTTAGA+AGG	-	Chr3:55855733-55855752	MsG0380014506.01.T01:intron	35.0%
!!	GACAAAAGCAAGTGTTGATA+TGG	-	Chr3:55856760-55856779	MsG0380014506.01.T01:CDS	35.0%
!!	TTTGAAGAGAAAGTGTTGGT+TGG	+	Chr3:55856145-55856164	None:intergenic	35.0%
!!!	ACTCACTAGTTTTTATGTGC+GGG	+	Chr3:55855824-55855843	None:intergenic	35.0%
!!!	CACTCACTAGTTTTTATGTG+CGG	+	Chr3:55855825-55855844	None:intergenic	35.0%
!!!	TTACGTGGAAGTGTTTTACT+AGG	-	Chr3:55855596-55855615	MsG0380014506.01.T01:intron	35.0%
	AATGGGTCCCTACTTTGTTA+TGG	-	Chr3:55856185-55856204	MsG0380014506.01.T01:intron	40.0%
	AGGTTCCACCATAACAAAGT+AGG	+	Chr3:55856196-55856215	None:intergenic	40.0%
	GACATGTCTGGTGGTAAAAA+GGG	-	Chr3:55855422-55855441	MsG0380014506.01.T01:intron	40.0%
	GGTTCCACCATAACAAAGTA+GGG	+	Chr3:55856195-55856214	None:intergenic	40.0%
	TACCTCAGAAAAACACACTC+GGG	-	Chr3:55855135-55855154	MsG0380014506.01.T01:CDS	40.0%
	TGACATGTCTGGTGGTAAAA+AGG	-	Chr3:55855421-55855440	MsG0380014506.01.T01:intron	40.0%
	TTACCTCTTTCCATCCTTCT+GGG	+	Chr3:55856652-55856671	None:intergenic	40.0%
!	ATACTCGTTCTAAACATGGG+CGG	-	Chr3:55855654-55855673	MsG0380014506.01.T01:intron	40.0%
!	CTTTGTTATGGTGGAACCTT+TGG	-	Chr3:55856197-55856216	MsG0380014506.01.T01:intron	40.0%
!	GTTGTTTGAGGTGTTATCTG+AGG	-	Chr3:55856712-55856731	MsG0380014506.01.T01:CDS	40.0%
!	TGACACACCGACATTGATTA+GGG	+	Chr3:55856056-55856075	None:intergenic	40.0%
!!	AGATGAATCAGTTAGGTTGG+GGG	-	Chr3:55856295-55856314	MsG0380014506.01.T01:intron	40.0%
!!	TTGCGAGTTACATTTTGGAG+CGG	-	Chr3:55855526-55855545	MsG0380014506.01.T01:intron	40.0%
!!!	CACACCAACTAGTTTTTACG+TGG	-	Chr3:55855581-55855600	MsG0380014506.01.T01:intron	40.0%
	AACCGAAGCTTCTCTTCTGA+TGG	+	Chr3:55855401-55855420	None:intergenic	45.0%
	ACAGGGTCCCTAATCAATGT+CGG	-	Chr3:55856046-55856065	MsG0380014506.01.T01:intron	45.0%
	AGACACACTTAACCCTCCAA+TGG	+	Chr3:55855556-55855575	None:intergenic	45.0%
	ATGTCTGGTGGTAAAAAGGG+TGG	-	Chr3:55855425-55855444	MsG0380014506.01.T01:intron	45.0%
	GTCGTTTCAAGCCAAGAGTA+AGG	+	Chr3:55856832-55856851	None:intergenic	45.0%
	GTTACCTCTTTCCATCCTTC+TGG	+	Chr3:55856653-55856672	None:intergenic	45.0%
	TGCAAAAGCTTGCGAGAACT+GGG	-	Chr3:55855292-55855311	MsG0380014506.01.T01:CDS	45.0%
	TGCCATCAGAAGAGAAGCTT+CGG	-	Chr3:55855396-55855415	MsG0380014506.01.T01:intron	45.0%
	TTCAAGCCAAGAGTAAGGTC+AGG	+	Chr3:55856827-55856846	None:intergenic	45.0%
	TTGAAACGACACACTGATCC+TGG	-	Chr3:55856842-55856861	MsG0380014506.01.T01:CDS	45.0%
	TTGCAAAAGCTTGCGAGAAC+TGG	-	Chr3:55855291-55855310	MsG0380014506.01.T01:CDS	45.0%
!	AAGCTTCGGTTTGACATGTC+TGG	-	Chr3:55855410-55855429	MsG0380014506.01.T01:intron	45.0%
!	ACTCGGGTCTAGTTTCATCA+GGG	-	Chr3:55855151-55855170	MsG0380014506.01.T01:CDS	45.0%
!	AGGTGTTATCTGAGGCTATG+GGG	-	Chr3:55856720-55856739	MsG0380014506.01.T01:CDS	45.0%
!	GAGGTGTTATCTGAGGCTAT+GGG	-	Chr3:55856719-55856738	MsG0380014506.01.T01:CDS	45.0%
!	GTGACACACCGACATTGATT+AGG	+	Chr3:55856057-55856076	None:intergenic	45.0%
!	TCTCGCAAGCTTTTGCAATC+TGG	+	Chr3:55855289-55855308	None:intergenic	45.0%
!	TGAGGTGTTATCTGAGGCTA+TGG	-	Chr3:55856718-55856737	MsG0380014506.01.T01:CDS	45.0%
!!	CAAGAGTAAGGTCAGGTTGA+GGG	+	Chr3:55856820-55856839	None:intergenic	45.0%
!!	GATGAATCAGTTAGGTTGGG+GGG	-	Chr3:55856296-55856315	MsG0380014506.01.T01:intron	45.0%
!!!	ATTTTGGAGCGGAAAGCCAT+TGG	-	Chr3:55855537-55855556	MsG0380014506.01.T01:intron	45.0%
!!!	AAATTTTAGAATAATAAAAT+TGG	-	Chr3:55856478-55856497	MsG0380014506.01.T01:intron	5.0%
	AACACCAGAGTGATTGTGCC+AGG	+	Chr3:55856863-55856882	None:intergenic	50.0%
	CAACCCAGAAGGATGGAAAG+AGG	-	Chr3:55856646-55856665	MsG0380014506.01.T01:CDS	50.0%
	CCAAGTTGTTGATCATGGCG+TGG	-	Chr3:55855322-55855341	MsG0380014506.01.T01:CDS	50.0%
	CCACGCCATGATCAACAACT+TGG	+	Chr3:55855325-55855344	None:intergenic	50.0%
	CCTCAACCTGACCTTACTCT+TGG	-	Chr3:55856818-55856837	MsG0380014506.01.T01:CDS	50.0%
	GCAAAAGCTTGCGAGAACTG+GGG	-	Chr3:55855293-55855312	MsG0380014506.01.T01:CDS	50.0%
	GGTCGCAAATCTCTTCTCTG+CGG	+	Chr3:55855268-55855287	None:intergenic	50.0%
	TGATCCTGGCACAATCACTC+TGG	-	Chr3:55856856-55856875	MsG0380014506.01.T01:exon	50.0%
	TTCCATCCTTCTGGGTTGTC+TGG	+	Chr3:55856644-55856663	None:intergenic	50.0%
!	CACTCGGGTCTAGTTTCATC+AGG	-	Chr3:55855150-55855169	MsG0380014506.01.T01:CDS	50.0%
!	CCAAGAGTAAGGTCAGGTTG+AGG	+	Chr3:55856821-55856840	None:intergenic	50.0%
!	CTTCGGTTTGACATGTCTGG+TGG	-	Chr3:55855413-55855432	MsG0380014506.01.T01:intron	50.0%
!	GACCCGAGTGTGTTTTTCTG+AGG	+	Chr3:55855140-55855159	None:intergenic	50.0%
!	GGGTCCCTACTTTGTTATGG+TGG	-	Chr3:55856188-55856207	MsG0380014506.01.T01:intron	50.0%
!	GTTATGGTGGAACCTTTGGC+TGG	-	Chr3:55856201-55856220	MsG0380014506.01.T01:intron	50.0%
!!	AATCAGTTAGGTTGGGGGGA+AGG	-	Chr3:55856300-55856319	MsG0380014506.01.T01:intron	50.0%
!!	GACGAAAGCACTCGTCCAAA+AGG	-	Chr3:55855173-55855192	MsG0380014506.01.T01:CDS	50.0%
!!!	AGGTCAGGTTGAGGGCATTT+TGG	+	Chr3:55856812-55856831	None:intergenic	50.0%
!!!	GGTCAGGTTGAGGGCATTTT+GGG	+	Chr3:55856811-55856830	None:intergenic	50.0%
	TGGAGCGGAAAGCCATTGGA+GGG	-	Chr3:55855541-55855560	MsG0380014506.01.T01:intron	55.0%
	TGGTGGAACCTTTGGCTGGA+GGG	-	Chr3:55856205-55856224	MsG0380014506.01.T01:intron	55.0%
	TTGGAGCGGAAAGCCATTGG+AGG	-	Chr3:55855540-55855559	MsG0380014506.01.T01:intron	55.0%
!	ATGGTGGAACCTTTGGCTGG+AGG	-	Chr3:55856204-55856223	MsG0380014506.01.T01:intron	55.0%
	AAGACTCCCCCTCCAGCCAA+AGG	+	Chr3:55856216-55856235	None:intergenic	60.0%
	AGGTGGCCAGACAACCCAGA+AGG	-	Chr3:55856635-55856654	MsG0380014506.01.T01:CDS	60.0%
	CTAGCCGGAATCGACGACGT+TGG	-	Chr3:55855239-55855258	MsG0380014506.01.T01:CDS	60.0%
	GGCCAGACAACCCAGAAGGA+TGG	-	Chr3:55856639-55856658	MsG0380014506.01.T01:CDS	60.0%
	GGTGGAACCTTTGGCTGGAG+GGG	-	Chr3:55856206-55856225	MsG0380014506.01.T01:intron	60.0%
	GTGGAACCTTTGGCTGGAGG+GGG	-	Chr3:55856207-55856226	MsG0380014506.01.T01:intron	60.0%
!!	AGTTAGGTTGGGGGGAAGGC+GGG	-	Chr3:55856304-55856323	MsG0380014506.01.T01:intron	60.0%
!!	CAGTTAGGTTGGGGGGAAGG+CGG	-	Chr3:55856303-55856322	MsG0380014506.01.T01:intron	60.0%
!!	GCCACCAACGTCGTCGATTC+CGG	+	Chr3:55855246-55855265	None:intergenic	60.0%
	GCCGGAATCGACGACGTTGG+TGG	-	Chr3:55855242-55855261	MsG0380014506.01.T01:CDS	65.0%
!!	GTTAGGTTGGGGGGAAGGCG+GGG	-	Chr3:55856305-55856324	MsG0380014506.01.T01:intron	65.0%
	GTTGGGGGGAAGGCGGGGCA+AGG	-	Chr3:55856310-55856329	MsG0380014506.01.T01:intron	75.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	55855076	55856889	55855076	ID=MsG0380014506.01;Name=MsG0380014506.01
Chr3	mRNA	55855076	55856889	55855076	ID=MsG0380014506.01.T01;Parent=MsG0380014506.01;Name=MsG0380014506.01.T01;_AED=0.49;_eAED=0.49;_QI=22\|1\|1\|1\|0.5\|0.33\|3\|0\|228
Chr3	exon	55855076	55855402	55855076	ID=MsG0380014506.01.T01:exon:4162;Parent=MsG0380014506.01.T01
Chr3	exon	55856508	55856889	55856508	ID=MsG0380014506.01.T01:exon:4161;Parent=MsG0380014506.01.T01
Chr3	five_prime_UTR	55856868	55856889	55856868	ID=MsG0380014506.01.T01:five_prime_utr;Parent=MsG0380014506.01.T01
Chr3	CDS	55856508	55856867	55856508	ID=MsG0380014506.01.T01:cds;Parent=MsG0380014506.01.T01
Chr3	CDS	55855076	55855402	55855076	ID=MsG0380014506.01.T01:cds;Parent=MsG0380014506.01.T01

Gene Sequence

>MsG0380014506.01.T01

ATGCAAACAATGGCACCAGCGAAAACTCTCGATTATTTACCTCAGAAAAACACACTCGGGTCTAGTTTCATCAGGGACGAAAGCACTCGTCCAAAAGGTGCTTACAATCAGTTCAGCAATGATGAGATTCCAATTATTTCTCTAGCCGGAATCGACGACGTTGGTGGCCGCAGAGAAGAGATTTGCGACCAGATTGCAAAAGCTTGCGAGAACTGGGGTATCTTCCAAGTTGTTGATCATGGCGTGGATCAAAAGCTCATTTCTGAGATGACCAGTTTTTCTAAAGAGTTCTTTGATTTGCCATCAGAAGAGAAGCTTCGGTTTGACATGTCTGGTGGTAAAAAGGGTGGCTTCGTAGTAGGAAAAGAGATGAATGATTGGAGAGAGCGAATGCTATACTTTTCATACCCAATTAGTGAAAGAGATTATTCAAGGTGGCCAGACAACCCAGAAGGATGGAAAGAGGTAACAGAACAATACAGTGAGAAGCTAATGAATTTAACATGCAAGTTGTTTGAGGTGTTATCTGAGGCTATGGGGTTAGAAAAAGAAGCTTTGACAAAAGCAAGTGTTGATATGGTTCAAAAGATTGTGGTAAATTACTACCCAAAATGCCCTCAACCTGACCTTACTCTTGGCTTGAAACGACACACTGATCCTGGCACAATCACTCTGGTGTTTCAATAA

Protein sequence

>MsG0380014506.01.T01

MQTMAPAKTLDYLPQKNTLGSSFIRDESTRPKGAYNQFSNDEIPIISLAGIDDVGGRREEICDQIAKACENWGIFQVVDHGVDQKLISEMTSFSKEFFDLPSEEKLRFDMSGGKKGGFVVGKEMNDWRERMLYFSYPISERDYSRWPDNPEGWKEVTEQYSEKLMNLTCKLFEVLSEAMGLEKEALTKASVDMVQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLVFQ*