Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018985.01.T01 | XP_024638231.1 | 52.294 | 109 | 35 | 2 | 37 | 145 | 294 | 385 | 1.69E-24 | 107 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018985.01.T01 | Q9SQX6 | 39.815 | 108 | 47 | 3 | 38 | 145 | 348 | 437 | 7.30E-17 | 79.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018985.01.T01 | G7JTG2 | 52.294 | 109 | 35 | 2 | 37 | 145 | 379 | 470 | 1.97e-24 | 107 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048404.01 | MsG0480018985.01 | 0.800360 | 1.495100e-48 | 6.948002e-46 |
| MsG0080048463.01 | MsG0480018985.01 | 0.837977 | 3.779097e-57 | 4.991575e-54 |
| MsG0080048464.01 | MsG0480018985.01 | 0.837287 | 5.681442e-57 | 7.345537e-54 |
| MsG0180000091.01 | MsG0480018985.01 | 0.808113 | 3.632950e-50 | 2.059521e-47 |
| MsG0180000114.01 | MsG0480018985.01 | 0.810249 | 1.266070e-50 | 7.593924e-48 |
| MsG0180000145.01 | MsG0480018985.01 | 0.804515 | 2.081950e-49 | 1.075531e-46 |
| MsG0180000241.01 | MsG0480018985.01 | 0.832283 | 1.032365e-55 | 1.148481e-52 |
| MsG0180000470.01 | MsG0480018985.01 | 0.810561 | 1.084181e-50 | 6.556692e-48 |
| MsG0180000814.01 | MsG0480018985.01 | 0.801862 | 7.369687e-49 | 3.557586e-46 |
| MsG0180000914.01 | MsG0480018985.01 | 0.814546 | 1.458523e-51 | 9.815201e-49 |
| MsG0180002377.01 | MsG0480018985.01 | 0.824733 | 6.880242e-54 | 6.146705e-51 |
| MsG0180003353.01 | MsG0480018985.01 | 0.803992 | 2.675363e-49 | 1.363764e-46 |
| MsG0180003885.01 | MsG0480018985.01 | 0.825612 | 4.264150e-54 | 3.905981e-51 |
| MsG0180004331.01 | MsG0480018985.01 | 0.812306 | 4.530228e-51 | 2.870235e-48 |
| MsG0180004389.01 | MsG0480018985.01 | 0.818059 | 2.388779e-52 | 1.769435e-49 |
| MsG0180004493.01 | MsG0480018985.01 | 0.809502 | 1.832830e-50 | 1.077950e-47 |
| MsG0180004500.01 | MsG0480018985.01 | 0.800499 | 1.400604e-48 | 6.531594e-46 |
| MsG0180005169.01 | MsG0480018985.01 | 0.823417 | 1.400493e-53 | 1.205064e-50 |
| MsG0180005292.01 | MsG0480018985.01 | 0.801220 | 9.978738e-49 | 4.739350e-46 |
| MsG0180005445.01 | MsG0480018985.01 | 0.804137 | 2.495943e-49 | 1.276981e-46 |
| MsG0180005730.01 | MsG0480018985.01 | 0.802779 | 4.770761e-49 | 2.357475e-46 |
| MsG0180006224.01 | MsG0480018985.01 | 0.811083 | 8.358837e-51 | 5.126052e-48 |
| MsG0180006243.01 | MsG0480018985.01 | 0.809461 | 1.870876e-50 | 1.099101e-47 |
| MsG0280010722.01 | MsG0480018985.01 | 0.827326 | 1.664488e-54 | 1.601799e-51 |
| MsG0280010736.01 | MsG0480018985.01 | 0.809735 | 1.633275e-50 | 9.665919e-48 |
| MsG0280010807.01 | MsG0480018985.01 | 0.822538 | 2.245178e-53 | 1.884693e-50 |
| MsG0280010916.01 | MsG0480018985.01 | 0.806742 | 7.097347e-50 | 3.882348e-47 |
| MsG0280011027.01 | MsG0480018985.01 | 0.831247 | 1.860453e-55 | 2.007239e-52 |
| MsG0280011272.01 | MsG0480018985.01 | -0.807524 | 4.847168e-50 | 2.705859e-47 |
| MsG0280011404.01 | MsG0480018985.01 | 0.809086 | 2.250995e-50 | 1.309290e-47 |
| MsG0380011581.01 | MsG0480018985.01 | 0.804296 | 2.312821e-49 | 1.188152e-46 |
| MsG0380011609.01 | MsG0480018985.01 | 0.820262 | 7.526832e-53 | 5.926654e-50 |
| MsG0380013183.01 | MsG0480018985.01 | 0.809046 | 2.296201e-50 | 1.334114e-47 |
| MsG0380014225.01 | MsG0480018985.01 | -0.800763 | 1.237395e-48 | 5.809203e-46 |
| MsG0380014506.01 | MsG0480018985.01 | 0.819587 | 1.073864e-52 | 8.298489e-50 |
| MsG0380014537.01 | MsG0480018985.01 | 0.832853 | 7.456281e-56 | 8.437789e-53 |
| MsG0380014866.01 | MsG0480018985.01 | 0.802923 | 4.455899e-49 | 2.209845e-46 |
| MsG0480018584.01 | MsG0480018985.01 | 0.802409 | 5.687999e-49 | 2.784302e-46 |
| MsG0480018653.01 | MsG0480018985.01 | 0.816368 | 5.733944e-52 | 4.055321e-49 |
| MsG0480018911.01 | MsG0480018985.01 | 0.811205 | 7.864088e-51 | 4.838119e-48 |
| MsG0480018985.01 | MsG0480019007.01 | 0.816401 | 5.637129e-52 | 3.990329e-49 |
| MsG0480018985.01 | MsG0480019711.01 | 0.832688 | 8.194296e-56 | 9.227533e-53 |
| MsG0480018985.01 | MsG0480020024.01 | 0.804208 | 2.412647e-49 | 1.236586e-46 |
| MsG0480018985.01 | MsG0480020832.01 | 0.800147 | 1.651908e-48 | 7.634982e-46 |
| MsG0480018985.01 | MsG0480020935.01 | -0.842816 | 2.051813e-58 | 3.147859e-55 |
| MsG0480018985.01 | MsG0480021056.01 | 0.821765 | 3.393080e-53 | 2.785991e-50 |
| MsG0480018985.01 | MsG0480021869.01 | 0.841086 | 5.881506e-58 | 8.546513e-55 |
| MsG0480018985.01 | MsG0480021870.01 | 0.829774 | 4.264207e-55 | 4.407892e-52 |
| MsG0480018985.01 | MsG0480022068.01 | 0.814797 | 1.282862e-51 | 8.691687e-49 |
| MsG0480018985.01 | MsG0480022514.01 | 0.808589 | 2.875089e-50 | 1.650363e-47 |
| MsG0480018985.01 | MsG0480022589.01 | 0.803830 | 2.891131e-49 | 1.467581e-46 |
| MsG0480018985.01 | MsG0480023045.01 | 0.806991 | 6.285523e-50 | 3.460445e-47 |
| MsG0480018985.01 | MsG0480023172.01 | 0.817940 | 2.540916e-52 | 1.876030e-49 |
| MsG0480018985.01 | MsG0480023251.01 | 0.835543 | 1.578747e-56 | 1.936545e-53 |
| MsG0480018985.01 | MsG0480023261.01 | 0.803065 | 4.164045e-49 | 2.072487e-46 |
| MsG0480018985.01 | MsG0480023488.01 | 0.813619 | 2.335964e-51 | 1.533007e-48 |
| MsG0480018985.01 | MsG0480023489.01 | 0.814861 | 1.241573e-51 | 8.426216e-49 |
| MsG0480018985.01 | MsG0480023503.01 | 0.815357 | 9.637922e-52 | 6.630094e-49 |
| MsG0480018985.01 | MsG0580024690.01 | 0.816372 | 5.721624e-52 | 4.046949e-49 |
| MsG0480018985.01 | MsG0580024790.01 | -0.824342 | 8.502547e-54 | 7.510017e-51 |
| MsG0480018985.01 | MsG0580024997.01 | 0.826253 | 3.003055e-54 | 2.801484e-51 |
| MsG0480018985.01 | MsG0580025332.01 | 0.831022 | 2.112326e-55 | 2.264122e-52 |
| MsG0480018985.01 | MsG0580025357.01 | -0.853896 | 1.764304e-61 | 3.870728e-58 |
| MsG0480018985.01 | MsG0580025587.01 | 0.803985 | 2.683704e-49 | 1.367787e-46 |
| MsG0480018985.01 | MsG0580025661.01 | 0.814013 | 1.912559e-51 | 1.268609e-48 |
| MsG0480018985.01 | MsG0580025832.01 | 0.821596 | 3.712799e-53 | 3.033777e-50 |
| MsG0480018985.01 | MsG0580025987.01 | 0.840377 | 9.017999e-58 | 1.282165e-54 |
| MsG0480018985.01 | MsG0580026304.01 | 0.803542 | 3.317478e-49 | 1.671625e-46 |
| MsG0480018985.01 | MsG0580026733.01 | 0.806341 | 8.622025e-50 | 4.668185e-47 |
| MsG0480018985.01 | MsG0580027320.01 | 0.806044 | 9.958616e-50 | 5.351277e-47 |
| MsG0480018985.01 | MsG0580028613.01 | -0.806186 | 9.294859e-50 | 5.012908e-47 |
| MsG0480018985.01 | MsG0580029236.01 | 0.843578 | 1.285211e-58 | 2.019862e-55 |
| MsG0480018985.01 | MsG0580030000.01 | 0.826841 | 2.173695e-54 | 2.062160e-51 |
| MsG0480018985.01 | MsG0680030413.01 | 0.827133 | 1.851116e-54 | 1.771160e-51 |
| MsG0480018985.01 | MsG0680030616.01 | 0.801975 | 6.985327e-49 | 3.381469e-46 |
| MsG0480018985.01 | MsG0680030677.01 | 0.800093 | 1.694127e-48 | 7.819502e-46 |
| MsG0480018985.01 | MsG0680031108.01 | 0.812817 | 3.501946e-51 | 2.248769e-48 |
| MsG0480018985.01 | MsG0680031617.01 | 0.801471 | 8.865536e-49 | 4.237367e-46 |
| MsG0480018985.01 | MsG0680033465.01 | 0.827780 | 1.295090e-54 | 1.262693e-51 |
| MsG0480018985.01 | MsG0680034230.01 | 0.821614 | 3.676891e-53 | 3.006015e-50 |
| MsG0480018985.01 | MsG0680034235.01 | 0.804048 | 2.604839e-49 | 1.329685e-46 |
| MsG0480018985.01 | MsG0680035580.01 | 0.800589 | 1.342719e-48 | 6.276065e-46 |
| MsG0480018985.01 | MsG0780036517.01 | 0.805308 | 1.421091e-49 | 7.493228e-47 |
| MsG0480018985.01 | MsG0780036593.01 | 0.867824 | 1.028993e-65 | 3.641606e-62 |
| MsG0480018985.01 | MsG0780036602.01 | 0.828656 | 7.963618e-55 | 7.965944e-52 |
| MsG0480018985.01 | MsG0780036659.01 | 0.809878 | 1.521831e-50 | 9.039924e-48 |
| MsG0480018985.01 | MsG0780037141.01 | 0.843413 | 1.422701e-58 | 2.224354e-55 |
| MsG0480018985.01 | MsG0780037292.01 | 0.816413 | 5.602735e-52 | 3.967138e-49 |
| MsG0480018985.01 | MsG0780038377.01 | 0.803734 | 3.026094e-49 | 1.532315e-46 |
| MsG0480018985.01 | MsG0780038378.01 | 0.807137 | 5.852899e-50 | 3.234505e-47 |
| MsG0480018985.01 | MsG0780038439.01 | 0.807460 | 4.999798e-50 | 2.786484e-47 |
| MsG0480018985.01 | MsG0780038488.01 | 0.808388 | 3.174086e-50 | 1.812572e-47 |
| MsG0480018985.01 | MsG0780038691.01 | 0.803363 | 3.612964e-49 | 1.811993e-46 |
| MsG0480018985.01 | MsG0780038907.01 | 0.801553 | 8.529993e-49 | 4.085349e-46 |
| MsG0480018985.01 | MsG0780039170.01 | 0.820625 | 6.213003e-53 | 4.941152e-50 |
| MsG0480018985.01 | MsG0780039443.01 | 0.833520 | 5.087295e-56 | 5.873313e-53 |
| MsG0480018985.01 | MsG0780039830.01 | -0.800074 | 1.709385e-48 | 7.886122e-46 |
| MsG0480018985.01 | MsG0780039867.01 | -0.840717 | 7.350352e-58 | 1.056098e-54 |
| MsG0480018985.01 | MsG0780040576.01 | -0.828578 | 8.318367e-55 | 8.301863e-52 |
| MsG0480018985.01 | MsG0780040763.01 | 0.819386 | 1.193233e-52 | 9.168580e-50 |
| MsG0480018985.01 | MsG0780040888.01 | 0.801665 | 8.090696e-49 | 3.885905e-46 |
| MsG0480018985.01 | MsG0780041091.01 | 0.812616 | 3.876267e-51 | 2.476213e-48 |
| MsG0480018985.01 | MsG0780041187.01 | 0.857788 | 1.285517e-62 | 3.209908e-59 |
| MsG0480018985.01 | MsG0780041387.01 | 0.804272 | 2.339514e-49 | 1.201090e-46 |
| MsG0480018985.01 | MsG0780041432.01 | 0.856868 | 2.404492e-62 | 5.820559e-59 |
| MsG0480018985.01 | MsG0780041440.01 | 0.818285 | 2.123441e-52 | 1.582720e-49 |
| MsG0480018985.01 | MsG0780041468.01 | 0.826426 | 2.730061e-54 | 2.559501e-51 |
| MsG0480018985.01 | MsG0780041734.01 | -0.811821 | 5.778718e-51 | 3.613436e-48 |
| MsG0480018985.01 | MsG0780041767.01 | 0.806703 | 7.233413e-50 | 3.952711e-47 |
| MsG0480018985.01 | MsG0880042520.01 | 0.808125 | 3.612147e-50 | 2.048395e-47 |
| MsG0480018985.01 | MsG0880043037.01 | 0.803640 | 3.164990e-49 | 1.598768e-46 |
| MsG0480018985.01 | MsG0880043157.01 | 0.833977 | 3.910698e-56 | 4.577684e-53 |
| MsG0480018985.01 | MsG0880043937.01 | 0.825156 | 5.465679e-54 | 4.942444e-51 |
| MsG0480018985.01 | MsG0880043971.01 | 0.809916 | 1.493299e-50 | 8.879356e-48 |
| MsG0480018985.01 | MsG0880044131.01 | 0.835598 | 1.528514e-56 | 1.878099e-53 |
| MsG0480018985.01 | MsG0880044210.01 | 0.801957 | 7.046590e-49 | 3.409640e-46 |
| MsG0480018985.01 | MsG0880044611.01 | -0.813491 | 2.491424e-51 | 1.629461e-48 |
| MsG0480018985.01 | MsG0880045111.01 | 0.823661 | 1.228614e-53 | 1.064631e-50 |
| MsG0480018985.01 | MsG0880046809.01 | 0.808611 | 2.843962e-50 | 1.633403e-47 |
| MsG0480018985.01 | MsG0880047267.01 | 0.824183 | 9.264968e-54 | 8.147089e-51 |
| MsG0480018985.01 | MsG0880047754.01 | 0.801788 | 7.630779e-49 | 3.676611e-46 |
| MsG0380014948.01 | MsG0480018985.01 | 0.819097 | 1.388567e-52 | 1.058498e-49 |
| MsG0380015277.01 | MsG0480018985.01 | 0.824837 | 6.501755e-54 | 5.825857e-51 |
| MsG0380015555.01 | MsG0480018985.01 | 0.813590 | 2.370500e-51 | 1.554452e-48 |
| MsG0380016285.01 | MsG0480018985.01 | 0.831349 | 1.756023e-55 | 1.900541e-52 |
| MsG0380016347.01 | MsG0480018985.01 | -0.802744 | 4.851448e-49 | 2.395136e-46 |
| MsG0380016407.01 | MsG0480018985.01 | 0.816305 | 5.922071e-52 | 4.181327e-49 |
| MsG0380016529.01 | MsG0480018985.01 | 0.809083 | 2.254559e-50 | 1.311243e-47 |
| MsG0380016671.01 | MsG0480018985.01 | 0.806863 | 6.691821e-50 | 3.672045e-47 |
| MsG0380016879.01 | MsG0480018985.01 | 0.822244 | 2.626973e-53 | 2.186640e-50 |
| MsG0380017202.01 | MsG0480018985.01 | 0.818626 | 1.776601e-52 | 1.336714e-49 |
| MsG0380017293.01 | MsG0480018985.01 | 0.881593 | 2.110490e-70 | 1.243937e-66 |
| MsG0380017931.01 | MsG0480018985.01 | 0.808290 | 3.330618e-50 | 1.897020e-47 |
| MsG0480018183.01 | MsG0480018985.01 | 0.824742 | 6.844487e-54 | 6.116611e-51 |
| MsG0480018236.01 | MsG0480018985.01 | 0.816937 | 4.274796e-52 | 3.070879e-49 |
| MsG0280006491.01 | MsG0480018985.01 | 0.810679 | 1.022547e-50 | 6.203693e-48 |
| MsG0280006601.01 | MsG0480018985.01 | 0.803189 | 3.924629e-49 | 1.959696e-46 |
| MsG0280006769.01 | MsG0480018985.01 | 0.803532 | 3.332382e-49 | 1.678750e-46 |
| MsG0280006770.01 | MsG0480018985.01 | 0.830857 | 2.318317e-55 | 2.472869e-52 |
| MsG0280007118.01 | MsG0480018985.01 | 0.824196 | 9.202066e-54 | 8.094594e-51 |
| MsG0280007307.01 | MsG0480018985.01 | 0.805559 | 1.259145e-49 | 6.682094e-47 |
| MsG0280007575.01 | MsG0480018985.01 | 0.827233 | 1.751501e-54 | 1.680882e-51 |
| MsG0280007955.01 | MsG0480018985.01 | 0.851591 | 8.034078e-61 | 1.634101e-57 |
| MsG0280008076.01 | MsG0480018985.01 | 0.806407 | 8.352195e-50 | 4.529614e-47 |
| MsG0280008112.01 | MsG0480018985.01 | 0.856022 | 4.259227e-62 | 1.002704e-58 |
| MsG0280008113.01 | MsG0480018985.01 | 0.814309 | 1.645399e-51 | 1.100253e-48 |
| MsG0280008377.01 | MsG0480018985.01 | 0.825442 | 4.677852e-54 | 4.263929e-51 |
| MsG0280008738.01 | MsG0480018985.01 | 0.837154 | 6.146301e-57 | 7.914417e-54 |
| MsG0280008765.01 | MsG0480018985.01 | 0.808982 | 2.369384e-50 | 1.374269e-47 |
| MsG0280008866.01 | MsG0480018985.01 | 0.810181 | 1.309863e-50 | 7.842152e-48 |
| MsG0280009421.01 | MsG0480018985.01 | 0.808285 | 3.338163e-50 | 1.901092e-47 |
| MsG0280010349.01 | MsG0480018985.01 | 0.828213 | 1.018644e-54 | 1.005909e-51 |
| MsG0280010350.01 | MsG0480018985.01 | 0.814122 | 1.808954e-51 | 1.203440e-48 |
| MsG0280010366.01 | MsG0480018985.01 | 0.815827 | 7.573928e-52 | 5.277601e-49 |
| MsG0280010517.01 | MsG0480018985.01 | 0.819486 | 1.132487e-52 | 8.726861e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018985.01.T01 | MTR_4g021520 | 52.294 | 109 | 35 | 2 | 37 | 145 | 379 | 470 | 5.00e-28 | 107 |
| MsG0480018985.01.T01 | MTR_4g021490 | 51.376 | 109 | 36 | 2 | 37 | 145 | 379 | 470 | 5.99e-28 | 107 |
| MsG0480018985.01.T01 | MTR_4g021535 | 46.789 | 109 | 41 | 2 | 37 | 145 | 328 | 419 | 2.26e-23 | 94.4 |
| MsG0480018985.01.T01 | MTR_4g021535 | 46.789 | 109 | 41 | 2 | 37 | 145 | 375 | 466 | 2.84e-23 | 94.4 |
| MsG0480018985.01.T01 | MTR_4g021530 | 68.852 | 61 | 13 | 1 | 85 | 145 | 416 | 470 | 1.29e-22 | 92.8 |
| MsG0480018985.01.T01 | MTR_4g021500 | 70.492 | 61 | 12 | 1 | 85 | 145 | 833 | 887 | 1.28e-21 | 90.1 |
| MsG0480018985.01.T01 | MTR_4g021500 | 43.119 | 109 | 45 | 2 | 37 | 145 | 379 | 470 | 7.89e-20 | 85.1 |
| MsG0480018985.01.T01 | MTR_4g021500 | 70.492 | 61 | 12 | 1 | 85 | 145 | 851 | 905 | 1.31e-21 | 90.1 |
| MsG0480018985.01.T01 | MTR_4g021500 | 43.119 | 109 | 45 | 2 | 37 | 145 | 379 | 470 | 7.83e-20 | 85.1 |
| MsG0480018985.01.T01 | MTR_4g021510 | 68.852 | 61 | 13 | 1 | 85 | 145 | 415 | 469 | 3.02e-21 | 89.0 |
| MsG0480018985.01.T01 | MTR_2g018600 | 35.664 | 143 | 71 | 3 | 3 | 145 | 348 | 469 | 2.00e-19 | 83.6 |
| MsG0480018985.01.T01 | MTR_3g100420 | 41.284 | 109 | 47 | 2 | 37 | 145 | 405 | 496 | 5.82e-19 | 82.4 |
| MsG0480018985.01.T01 | MTR_2g018630 | 41.284 | 109 | 47 | 2 | 37 | 145 | 269 | 360 | 1.62e-18 | 80.5 |
| MsG0480018985.01.T01 | MTR_2g018590 | 39.450 | 109 | 49 | 2 | 37 | 145 | 378 | 469 | 5.32e-18 | 79.7 |
| MsG0480018985.01.T01 | MTR_2g018630 | 41.284 | 109 | 47 | 2 | 37 | 145 | 374 | 465 | 6.61e-18 | 79.3 |
| MsG0480018985.01.T01 | MTR_2g009200 | 43.373 | 83 | 35 | 3 | 69 | 145 | 363 | 439 | 1.66e-11 | 60.8 |
| MsG0480018985.01.T01 | MTR_7g051430 | 43.333 | 60 | 28 | 1 | 86 | 145 | 442 | 495 | 7.54e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018985.01.T01 | AT3G10450 | 39.815 | 108 | 47 | 3 | 38 | 145 | 305 | 394 | 6.16e-18 | 79.3 |
| MsG0480018985.01.T01 | AT3G10450 | 39.815 | 108 | 47 | 3 | 38 | 145 | 348 | 437 | 7.44e-18 | 79.3 |
| MsG0480018985.01.T01 | AT1G33540 | 65.574 | 61 | 14 | 3 | 85 | 145 | 411 | 464 | 1.13e-17 | 78.6 |
| MsG0480018985.01.T01 | AT1G33540 | 35.915 | 142 | 70 | 5 | 4 | 145 | 301 | 421 | 2.27e-17 | 77.8 |
| MsG0480018985.01.T01 | AT5G09640 | 41.667 | 108 | 46 | 4 | 38 | 145 | 375 | 465 | 3.16e-17 | 77.4 |
| MsG0480018985.01.T01 | AT2G23010 | 43.519 | 108 | 43 | 4 | 38 | 145 | 348 | 437 | 1.59e-16 | 75.5 |
| MsG0480018985.01.T01 | AT2G22960 | 32.168 | 143 | 75 | 4 | 3 | 145 | 64 | 184 | 2.81e-16 | 72.0 |
| MsG0480018985.01.T01 | AT2G23010 | 43.519 | 108 | 43 | 4 | 38 | 145 | 348 | 437 | 5.11e-16 | 73.9 |
| MsG0480018985.01.T01 | AT3G12203 | 40.367 | 109 | 47 | 4 | 37 | 145 | 289 | 379 | 6.30e-16 | 73.6 |
| MsG0480018985.01.T01 | AT3G12203 | 40.367 | 109 | 47 | 4 | 37 | 145 | 347 | 437 | 6.72e-16 | 73.6 |
| MsG0480018985.01.T01 | AT3G12203 | 40.367 | 109 | 47 | 4 | 37 | 145 | 326 | 416 | 6.72e-16 | 73.6 |
| MsG0480018985.01.T01 | AT5G36180 | 40.741 | 108 | 46 | 4 | 38 | 145 | 250 | 339 | 1.37e-15 | 72.4 |
| MsG0480018985.01.T01 | AT5G36180 | 40.741 | 108 | 46 | 4 | 38 | 145 | 250 | 339 | 1.37e-15 | 72.4 |
| MsG0480018985.01.T01 | AT2G22920 | 41.667 | 108 | 45 | 4 | 38 | 145 | 167 | 256 | 2.48e-15 | 70.9 |
| MsG0480018985.01.T01 | AT5G36180 | 46.154 | 91 | 31 | 4 | 55 | 145 | 369 | 441 | 3.23e-15 | 71.6 |
| MsG0480018985.01.T01 | AT1G73300 | 38.889 | 108 | 48 | 4 | 38 | 145 | 352 | 441 | 5.20e-15 | 71.2 |
| MsG0480018985.01.T01 | AT1G73300 | 38.889 | 108 | 48 | 4 | 38 | 145 | 352 | 441 | 5.20e-15 | 71.2 |
| MsG0480018985.01.T01 | AT2G22920 | 41.905 | 105 | 43 | 4 | 38 | 142 | 346 | 432 | 6.46e-15 | 70.9 |
| MsG0480018985.01.T01 | AT1G73310 | 38.889 | 108 | 48 | 4 | 38 | 145 | 352 | 441 | 6.83e-15 | 70.9 |
| MsG0480018985.01.T01 | AT1G73280 | 38.889 | 108 | 48 | 4 | 38 | 145 | 225 | 314 | 7.35e-15 | 70.1 |
| MsG0480018985.01.T01 | AT1G73280 | 38.889 | 108 | 48 | 4 | 38 | 145 | 250 | 339 | 8.41e-15 | 70.1 |
| MsG0480018985.01.T01 | AT1G73280 | 38.889 | 108 | 48 | 4 | 38 | 145 | 352 | 441 | 8.53e-15 | 70.5 |
| MsG0480018985.01.T01 | AT1G73270 | 40.741 | 108 | 46 | 4 | 38 | 145 | 352 | 441 | 1.11e-14 | 70.1 |
| MsG0480018985.01.T01 | AT2G22970 | 40.741 | 108 | 46 | 4 | 38 | 145 | 344 | 433 | 1.15e-14 | 70.1 |
| MsG0480018985.01.T01 | AT1G73270 | 40.741 | 108 | 46 | 4 | 38 | 145 | 352 | 441 | 1.26e-14 | 70.1 |
| MsG0480018985.01.T01 | AT1G73290 | 37.963 | 108 | 49 | 4 | 38 | 145 | 349 | 438 | 2.20e-14 | 69.3 |
| MsG0480018985.01.T01 | AT2G23000 | 39.815 | 108 | 47 | 4 | 38 | 145 | 348 | 437 | 2.38e-14 | 69.3 |
| MsG0480018985.01.T01 | AT2G23000 | 39.815 | 108 | 47 | 4 | 38 | 145 | 348 | 437 | 2.38e-14 | 69.3 |
| MsG0480018985.01.T01 | AT2G22990 | 38.889 | 108 | 48 | 4 | 38 | 145 | 230 | 319 | 5.32e-14 | 67.8 |
| MsG0480018985.01.T01 | AT2G22980 | 37.963 | 108 | 49 | 4 | 38 | 145 | 341 | 430 | 7.05e-14 | 67.8 |
| MsG0480018985.01.T01 | AT2G22990 | 38.889 | 108 | 48 | 4 | 38 | 145 | 344 | 433 | 7.21e-14 | 67.8 |
| MsG0480018985.01.T01 | AT3G12240 | 37.963 | 108 | 49 | 3 | 38 | 145 | 347 | 436 | 1.28e-13 | 67.0 |
| MsG0480018985.01.T01 | AT2G22990 | 38.889 | 108 | 48 | 4 | 38 | 145 | 230 | 319 | 1.77e-13 | 66.2 |
| MsG0480018985.01.T01 | AT2G22990 | 38.889 | 108 | 48 | 4 | 38 | 145 | 335 | 424 | 2.40e-13 | 66.2 |
| MsG0480018985.01.T01 | AT3G12230 | 37.037 | 108 | 50 | 3 | 38 | 145 | 346 | 435 | 3.18e-13 | 65.9 |
| MsG0480018985.01.T01 | AT3G12220 | 35.238 | 105 | 50 | 3 | 38 | 142 | 316 | 402 | 6.07e-11 | 59.3 |
| MsG0480018985.01.T01 | AT3G12220 | 35.238 | 105 | 50 | 3 | 38 | 142 | 346 | 432 | 6.76e-11 | 59.3 |
| MsG0480018985.01.T01 | AT3G12220 | 35.238 | 105 | 50 | 3 | 38 | 142 | 294 | 380 | 7.07e-11 | 59.3 |
Find 33 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATAAATTTATGCCATCTT+AGG | 0.230288 | 4:-12874520 | None:intergenic |
| AAAGAAATCGCTTAAACTAT+TGG | 0.303092 | 4:+12872722 | MsG0480018985.01.T01:CDS |
| AAACAAACAGATATGTAAAA+AGG | 0.328738 | 4:+12874564 | MsG0480018985.01.T01:three_prime_UTR |
| CGCGTAAGTCCTTGTGTATC+TGG | 0.370963 | 4:-12874264 | None:intergenic |
| CCATTTCCTATGGTTCCTGC+AGG | 0.400318 | 4:-12872779 | None:intergenic |
| GATACCGTTCTTTGATATAC+AGG | 0.408648 | 4:+12872876 | MsG0480018985.01.T01:CDS |
| CCTGCAGGAACCATAGGAAA+TGG | 0.412738 | 4:+12872779 | MsG0480018985.01.T01:CDS |
| AACTACTCCATTGTACTGAT+TGG | 0.431699 | 4:+12873873 | MsG0480018985.01.T01:CDS |
| TAAATCTTTCCCATTTCCTA+TGG | 0.432424 | 4:-12872789 | None:intergenic |
| ATTGTACTGATTGGAGGCCA+TGG | 0.486682 | 4:+12873882 | MsG0480018985.01.T01:CDS |
| CTGCAGGAACCATAGGAAAT+GGG | 0.495948 | 4:+12872780 | MsG0480018985.01.T01:CDS |
| TACATAGCTTTGATCCCTGC+AGG | 0.512521 | 4:+12872764 | MsG0480018985.01.T01:CDS |
| TCCTTGTGTATCTGGACGAA+AGG | 0.517150 | 4:-12874256 | None:intergenic |
| TACTCCATTGTACTGATTGG+AGG | 0.530548 | 4:+12873876 | MsG0480018985.01.T01:CDS |
| TTGATCCCTGCAGGAACCAT+AGG | 0.533180 | 4:+12872773 | MsG0480018985.01.T01:CDS |
| AACATGGGAAAACATTGCTC+AGG | 0.535431 | 4:-12874458 | None:intergenic |
| TGTAAATCAGAAGCCTAAGA+TGG | 0.541068 | 4:+12874507 | MsG0480018985.01.T01:exon |
| CTTAGGCTTCTGATTTACAA+AGG | 0.544613 | 4:-12874503 | None:intergenic |
| CATTTCCTATGGTTCCTGCA+GGG | 0.544883 | 4:-12872778 | None:intergenic |
| AGATATCCACCTAGTGAACA+TGG | 0.553121 | 4:-12874474 | None:intergenic |
| TTGGAGGCCATGGTTTGTAA+TGG | 0.562406 | 4:+12873892 | MsG0480018985.01.T01:CDS |
| CACTTGACCATTACAAACCA+TGG | 0.571053 | 4:-12873899 | None:intergenic |
| GTTTGTAATGGTCAAGTGGG+AGG | 0.586010 | 4:+12873904 | MsG0480018985.01.T01:CDS |
| TTTGTAATGGTCAAGTGGGA+GGG | 0.587915 | 4:+12873905 | MsG0480018985.01.T01:CDS |
| CATTGCTCAGGAGTGTACTC+AGG | 0.590734 | 4:-12874446 | None:intergenic |
| CATGACATTTGCAACTGTGA+AGG | 0.593054 | 4:+12874292 | MsG0480018985.01.T01:CDS |
| CATGGTTTGTAATGGTCAAG+TGG | 0.593190 | 4:+12873900 | MsG0480018985.01.T01:CDS |
| AGGACAAGAAAATAATGTCA+AGG | 0.613541 | 4:+12874584 | MsG0480018985.01.T01:three_prime_UTR |
| ATGGTTTGTAATGGTCAAGT+GGG | 0.616205 | 4:+12873901 | MsG0480018985.01.T01:CDS |
| TTCACCTGTATATCAAAGAA+CGG | 0.620990 | 4:-12872880 | None:intergenic |
| ATGGCCTCCAATCAGTACAA+TGG | 0.634651 | 4:-12873880 | None:intergenic |
| TCCTTTCGTCCAGATACACA+AGG | 0.649493 | 4:+12874255 | MsG0480018985.01.T01:CDS |
| GATATCCACCTAGTGAACAT+GGG | 0.674450 | 4:-12874473 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAATATTTATTTTGTTTT+TGG | + | Chr4:12873064-12873083 | MsG0480018985.01.T01:intron | 10.0% |
| !! | TAAAAGTTGACAAAAAAATT+TGG | - | Chr4:12873413-12873432 | None:intergenic | 15.0% |
| !! | TTAAAATTGATATAAACTAG+AGG | - | Chr4:12873286-12873305 | None:intergenic | 15.0% |
| !! | AAACAAACAGATATGTAAAA+AGG | + | Chr4:12874564-12874583 | MsG0480018985.01.T01:three_prime_UTR | 20.0% |
| !! | TGAAGCAATATTAAAAGATT+TGG | - | Chr4:12874176-12874195 | None:intergenic | 20.0% |
| !! | TTTAAGAAAAACACTCAATT+TGG | + | Chr4:12874355-12874374 | MsG0480018985.01.T01:intron | 20.0% |
| !!! | GAAAATTACTGATTAAGATT+AGG | - | Chr4:12874237-12874256 | None:intergenic | 20.0% |
| !!! | GAGTTTATTTCTTTTAAAAC+CGG | + | Chr4:12872922-12872941 | MsG0480018985.01.T01:CDS | 20.0% |
| ! | AAAAATAGAATTGAACTCGT+CGG | + | Chr4:12873955-12873974 | MsG0480018985.01.T01:intron | 25.0% |
| ! | AAAGAAATCGCTTAAACTAT+TGG | + | Chr4:12872722-12872741 | MsG0480018985.01.T01:CDS | 25.0% |
| ! | AATATTGAACCATAACATAG+TGG | + | Chr4:12874129-12874148 | MsG0480018985.01.T01:intron | 25.0% |
| ! | AGGTTAGTAGATGATATATT+GGG | + | Chr4:12873484-12873503 | MsG0480018985.01.T01:intron | 25.0% |
| ! | AGTTGACAAAAAAATTTGGT+TGG | - | Chr4:12873409-12873428 | None:intergenic | 25.0% |
| ! | CATGTATCATAAGATATTGA+TGG | - | Chr4:12873218-12873237 | None:intergenic | 25.0% |
| ! | CTTGAAATGTCAATTTGTAT+TGG | + | Chr4:12873536-12873555 | MsG0480018985.01.T01:intron | 25.0% |
| ! | TCATAAATTTATGCCATCTT+AGG | - | Chr4:12874523-12874542 | None:intergenic | 25.0% |
| ! | TGACTTAAATCTGATTATTG+AGG | + | Chr4:12873464-12873483 | MsG0480018985.01.T01:intron | 25.0% |
| ! | TTTGATTCATGATTAGAAGT+AGG | + | Chr4:12873586-12873605 | MsG0480018985.01.T01:intron | 25.0% |
| !! | GACATTTCAAGTAAAAACAA+GGG | - | Chr4:12873527-12873546 | None:intergenic | 25.0% |
| !! | TGACATTTCAAGTAAAAACA+AGG | - | Chr4:12873528-12873547 | None:intergenic | 25.0% |
| !! | TTCGTGTAATTAATTTTGCA+GGG | + | Chr4:12874407-12874426 | MsG0480018985.01.T01:intron | 25.0% |
| !! | TTTCGTGTAATTAATTTTGC+AGG | + | Chr4:12874406-12874425 | MsG0480018985.01.T01:intron | 25.0% |
| !! | TTTTGTATCAAATCGAGATA+CGG | - | Chr4:12873243-12873262 | None:intergenic | 25.0% |
| AAGAAAAACACTCAATTTGG+AGG | + | Chr4:12874358-12874377 | MsG0480018985.01.T01:intron | 30.0% | |
| AAGTGGACAATTTACTTTAG+AGG | - | Chr4:12873712-12873731 | None:intergenic | 30.0% | |
| AATGACAGAAGAAAAACTGT+TGG | - | Chr4:12873439-12873458 | None:intergenic | 30.0% | |
| ACATGCATTATTATATGCAG+AGG | - | Chr4:12873163-12873182 | None:intergenic | 30.0% | |
| AGAAAAACACTCAATTTGGA+GGG | + | Chr4:12874359-12874378 | MsG0480018985.01.T01:intron | 30.0% | |
| AGGACAAGAAAATAATGTCA+AGG | + | Chr4:12874584-12874603 | MsG0480018985.01.T01:three_prime_UTR | 30.0% | |
| AGTGGACAATTTACTTTAGA+GGG | - | Chr4:12873711-12873730 | None:intergenic | 30.0% | |
| ATAATCTTGAATCAAGCCAA+TGG | - | Chr4:12874012-12874031 | None:intergenic | 30.0% | |
| ATTAGATTCATCTGATGTAG+CGG | - | Chr4:12873332-12873351 | None:intergenic | 30.0% | |
| CTACATTTATGTAACAACAC+CGG | - | Chr4:12872944-12872963 | None:intergenic | 30.0% | |
| GAGGTTAGTAGATGATATAT+TGG | + | Chr4:12873483-12873502 | MsG0480018985.01.T01:intron | 30.0% | |
| TAAATCTTTCCCATTTCCTA+TGG | - | Chr4:12872792-12872811 | None:intergenic | 30.0% | |
| TATAAACTAGAGGTTCGTAT+TGG | - | Chr4:12873276-12873295 | None:intergenic | 30.0% | |
| TATTAAAAGATTTGGACCGT+AGG | - | Chr4:12874168-12874187 | None:intergenic | 30.0% | |
| TCATGCAATCTAAGCAAAAA+AGG | + | Chr4:12872854-12872873 | MsG0480018985.01.T01:CDS | 30.0% | |
| TGTTATGGTTCAATATTCAG+TGG | - | Chr4:12874126-12874145 | None:intergenic | 30.0% | |
| TTCACCTGTATATCAAAGAA+CGG | - | Chr4:12872883-12872902 | None:intergenic | 30.0% | |
| ! | GTAATTAATTTTGCAGGGTT+CGG | + | Chr4:12874412-12874431 | MsG0480018985.01.T01:intron | 30.0% |
| ! | TAATTAATTTTGCAGGGTTC+GGG | + | Chr4:12874413-12874432 | MsG0480018985.01.T01:intron | 30.0% |
| !!! | CAATGATGTATTTTTTGCAG+TGG | + | Chr4:12873801-12873820 | MsG0480018985.01.T01:intron | 30.0% |
| !!! | CTTTTTCAAGGTGAATAAGT+GGG | + | Chr4:12873114-12873133 | MsG0480018985.01.T01:intron | 30.0% |
| !!! | TTTTTCAAGGTGAATAAGTG+GGG | + | Chr4:12873115-12873134 | MsG0480018985.01.T01:intron | 30.0% |
| ATTATTATATGCAGAGGCCA+GGG | - | Chr4:12873157-12873176 | None:intergenic | 35.0% | |
| CCACTTATTCACCTTGAAAA+AGG | - | Chr4:12873116-12873135 | None:intergenic | 35.0% | |
| CTTAGGCTTCTGATTTACAA+AGG | - | Chr4:12874506-12874525 | None:intergenic | 35.0% | |
| GATACCGTTCTTTGATATAC+AGG | + | Chr4:12872876-12872895 | MsG0480018985.01.T01:CDS | 35.0% | |
| GTGATTCATTCCAGTTCAAT+GGG | - | Chr4:12874041-12874060 | None:intergenic | 35.0% | |
| GTGGTTCAACATGATTGAAT+CGG | - | Chr4:12874107-12874126 | None:intergenic | 35.0% | |
| TGTAAATCAGAAGCCTAAGA+TGG | + | Chr4:12874507-12874526 | MsG0480018985.01.T01:exon | 35.0% | |
| TGTGATTCATTCCAGTTCAA+TGG | - | Chr4:12874042-12874061 | None:intergenic | 35.0% | |
| TTAGATTCATCTGATGTAGC+GGG | - | Chr4:12873331-12873350 | None:intergenic | 35.0% | |
| TTATCATAGTCCCATTGAAC+TGG | + | Chr4:12874028-12874047 | MsG0480018985.01.T01:intron | 35.0% | |
| ! | AACTACTCCATTGTACTGAT+TGG | + | Chr4:12873873-12873892 | MsG0480018985.01.T01:CDS | 35.0% |
| ! | AATGTTTTCCCATGTTCACT+AGG | + | Chr4:12874465-12874484 | MsG0480018985.01.T01:CDS | 35.0% |
| ! | AGAAGTAGGTTTTCGTTTCA+CGG | + | Chr4:12873600-12873619 | MsG0480018985.01.T01:intron | 35.0% |
| ! | ATGGTTTGTAATGGTCAAGT+GGG | + | Chr4:12873901-12873920 | MsG0480018985.01.T01:CDS | 35.0% |
| ! | GTTTTTCCGTTATAGCTTTC+TGG | + | Chr4:12873748-12873767 | MsG0480018985.01.T01:intron | 35.0% |
| !! | AACAAATCAGCTAGTCTTGA+GGG | - | Chr4:12873777-12873796 | None:intergenic | 35.0% |
| !! | CAAGACTAGCTGATTTGTTA+TGG | + | Chr4:12873778-12873797 | MsG0480018985.01.T01:intron | 35.0% |
| !! | GCTAGAATTCACCTTTTTCA+AGG | + | Chr4:12873102-12873121 | MsG0480018985.01.T01:intron | 35.0% |
| !! | TAACAAATCAGCTAGTCTTG+AGG | - | Chr4:12873778-12873797 | None:intergenic | 35.0% |
| !!! | CCTTTTTCAAGGTGAATAAG+TGG | + | Chr4:12873113-12873132 | MsG0480018985.01.T01:intron | 35.0% |
| AAAGGTGAATTCTAGCCACT+AGG | - | Chr4:12873098-12873117 | None:intergenic | 40.0% | |
| AACATGGGAAAACATTGCTC+AGG | - | Chr4:12874461-12874480 | None:intergenic | 40.0% | |
| AATCTCAACTGCGATGTTAC+TGG | - | Chr4:12873678-12873697 | None:intergenic | 40.0% | |
| ACGGGTAAACCACTATGTTA+TGG | - | Chr4:12874141-12874160 | None:intergenic | 40.0% | |
| AGATATCCACCTAGTGAACA+TGG | - | Chr4:12874477-12874496 | None:intergenic | 40.0% | |
| ATCTGATGCAGCTTCAGAAA+TGG | - | Chr4:12874202-12874221 | None:intergenic | 40.0% | |
| CACTTGACCATTACAAACCA+TGG | - | Chr4:12873902-12873921 | None:intergenic | 40.0% | |
| CATGACATTTGCAACTGTGA+AGG | + | Chr4:12874292-12874311 | MsG0480018985.01.T01:CDS | 40.0% | |
| CATTATTATATGCAGAGGCC+AGG | - | Chr4:12873158-12873177 | None:intergenic | 40.0% | |
| CGAATTTGACTGCTTGAAAG+TGG | - | Chr4:12873729-12873748 | None:intergenic | 40.0% | |
| GATATCCACCTAGTGAACAT+GGG | - | Chr4:12874476-12874495 | None:intergenic | 40.0% | |
| TAGATTCATCTGATGTAGCG+GGG | - | Chr4:12873330-12873349 | None:intergenic | 40.0% | |
| TTGTCTACACAGCATGGATA+AGG | + | Chr4:12873845-12873864 | MsG0480018985.01.T01:intron | 40.0% | |
| TTTGTAATGGTCAAGTGGGA+GGG | + | Chr4:12873905-12873924 | MsG0480018985.01.T01:CDS | 40.0% | |
| ! | AATGGCGAATTGGTGACTTT+CGG | - | Chr4:12873994-12874013 | None:intergenic | 40.0% |
| ! | CATGGTTTGTAATGGTCAAG+TGG | + | Chr4:12873900-12873919 | MsG0480018985.01.T01:CDS | 40.0% |
| ! | TTGGTTGGCTACACAAAGAT+AGG | - | Chr4:12873394-12873413 | None:intergenic | 40.0% |
| !! | TACTCCATTGTACTGATTGG+AGG | + | Chr4:12873876-12873895 | MsG0480018985.01.T01:CDS | 40.0% |
| !! | TTTTTGGTCAAGTAGCCTAG+TGG | + | Chr4:12873080-12873099 | MsG0480018985.01.T01:intron | 40.0% |
| ATGGCCTCCAATCAGTACAA+TGG | - | Chr4:12873883-12873902 | None:intergenic | 45.0% | |
| CATTTCCTATGGTTCCTGCA+GGG | - | Chr4:12872781-12872800 | None:intergenic | 45.0% | |
| CCATGCTGTGTAGACAAGAA+GGG | - | Chr4:12873842-12873861 | None:intergenic | 45.0% | |
| CTGCAGGAACCATAGGAAAT+GGG | + | Chr4:12872780-12872799 | MsG0480018985.01.T01:CDS | 45.0% | |
| GAAAGTCACCAATTCGCCAT+TGG | + | Chr4:12873993-12874012 | MsG0480018985.01.T01:intron | 45.0% | |
| GAATCAAGCCAATGGCGAAT+TGG | - | Chr4:12874004-12874023 | None:intergenic | 45.0% | |
| GAATGAATCACAACCGAACC+AGG | + | Chr4:12874050-12874069 | MsG0480018985.01.T01:intron | 45.0% | |
| GGGCATCCAGAAAGCTATAA+CGG | - | Chr4:12873757-12873776 | None:intergenic | 45.0% | |
| GTTTGTAATGGTCAAGTGGG+AGG | + | Chr4:12873904-12873923 | MsG0480018985.01.T01:CDS | 45.0% | |
| TCCATGCTGTGTAGACAAGA+AGG | - | Chr4:12873843-12873862 | None:intergenic | 45.0% | |
| TCCTTGTGTATCTGGACGAA+AGG | - | Chr4:12874259-12874278 | None:intergenic | 45.0% | |
| TCCTTTCGTCCAGATACACA+AGG | + | Chr4:12874255-12874274 | MsG0480018985.01.T01:CDS | 45.0% | |
| ! | GTTTTCCCATGTTCACTAGG+TGG | + | Chr4:12874468-12874487 | MsG0480018985.01.T01:CDS | 45.0% |
| ! | TTGGAGGCCATGGTTTGTAA+TGG | + | Chr4:12873892-12873911 | MsG0480018985.01.T01:CDS | 45.0% |
| ! | TTGGTGACTTTCGGTTAACC+AGG | - | Chr4:12873985-12874004 | None:intergenic | 45.0% |
| !! | ATTGTACTGATTGGAGGCCA+TGG | + | Chr4:12873882-12873901 | MsG0480018985.01.T01:CDS | 45.0% |
| !! | TACACTGGTTCAACCTGGTT+CGG | - | Chr4:12874066-12874085 | None:intergenic | 45.0% |
| !! | TACATAGCTTTGATCCCTGC+AGG | + | Chr4:12872764-12872783 | MsG0480018985.01.T01:CDS | 45.0% |
| AATCGGATGAACCAACTGCG+CGG | - | Chr4:12874090-12874109 | None:intergenic | 50.0% | |
| ATTTGGACCGTAGGTCGAAC+GGG | - | Chr4:12874159-12874178 | None:intergenic | 50.0% | |
| CCATTTCCTATGGTTCCTGC+AGG | - | Chr4:12872782-12872801 | None:intergenic | 50.0% | |
| CCCTTCTTGTCTACACAGCA+TGG | + | Chr4:12873839-12873858 | MsG0480018985.01.T01:intron | 50.0% | |
| CCTGCAGGAACCATAGGAAA+TGG | + | Chr4:12872779-12872798 | MsG0480018985.01.T01:CDS | 50.0% | |
| CGCGTAAGTCCTTGTGTATC+TGG | - | Chr4:12874267-12874286 | None:intergenic | 50.0% | |
| GATTTGGACCGTAGGTCGAA+CGG | - | Chr4:12874160-12874179 | None:intergenic | 50.0% | |
| TGGTTTACCCGTTCGACCTA+CGG | + | Chr4:12874149-12874168 | MsG0480018985.01.T01:intron | 50.0% | |
| TTGATCCCTGCAGGAACCAT+AGG | + | Chr4:12872773-12872792 | MsG0480018985.01.T01:CDS | 50.0% | |
| ! | AGGTGAATAAGTGGGGTGTC+CGG | + | Chr4:12873122-12873141 | MsG0480018985.01.T01:intron | 50.0% |
| ! | CATTGCTCAGGAGTGTACTC+AGG | - | Chr4:12874449-12874468 | None:intergenic | 50.0% |
| !! | ATTGAACTCGTCGGTTCACC+TGG | + | Chr4:12873964-12873983 | MsG0480018985.01.T01:intron | 50.0% |
| AACCAACTGCGCGGTTACAC+TGG | - | Chr4:12874081-12874100 | None:intergenic | 55.0% | |
| AACCAGTGTAACCGCGCAGT+TGG | + | Chr4:12874076-12874095 | MsG0480018985.01.T01:intron | 55.0% | |
| ! | GGTGAATAAGTGGGGTGTCC+GGG | + | Chr4:12873123-12873142 | MsG0480018985.01.T01:intron | 55.0% |
| ! | GTGAATAAGTGGGGTGTCCG+GGG | + | Chr4:12873124-12873143 | MsG0480018985.01.T01:intron | 55.0% |
| ! | TGAATAAGTGGGGTGTCCGG+GGG | + | Chr4:12873125-12873144 | MsG0480018985.01.T01:intron | 55.0% |
| !! | GCGGTTACACTGGTTCAACC+TGG | - | Chr4:12874071-12874090 | None:intergenic | 55.0% |
| CTGCCACTGAGCTGTGCTCA+CGG | + | Chr4:12873186-12873205 | MsG0480018985.01.T01:intron | 60.0% | |
| GTACCGTGAGCACAGCTCAG+TGG | - | Chr4:12873192-12873211 | None:intergenic | 60.0% | |
| GTGAGCACAGCTCAGTGGCA+GGG | - | Chr4:12873187-12873206 | None:intergenic | 60.0% | |
| TGAGCACAGCTCAGTGGCAG+GGG | - | Chr4:12873186-12873205 | None:intergenic | 60.0% | |
| CGTGAGCACAGCTCAGTGGC+AGG | - | Chr4:12873188-12873207 | None:intergenic | 65.0% | |
| GAGGCCAGGGTTCGAACCCC+CGG | - | Chr4:12873144-12873163 | None:intergenic | 70.0% | |
| GTGTCCGGGGGTTCGAACCC+TGG | + | Chr4:12873137-12873156 | MsG0480018985.01.T01:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 12872715 | 12874631 | 12872715 | ID=MsG0480018985.01;Name=MsG0480018985.01 |
| Chr4 | mRNA | 12872715 | 12874631 | 12872715 | ID=MsG0480018985.01.T01;Parent=MsG0480018985.01;Name=MsG0480018985.01.T01;_AED=0.50;_eAED=0.72;_QI=0|0.33|0.25|1|0.33|0.25|4|120|145 |
| Chr4 | exon | 12872715 | 12872943 | 12872715 | ID=MsG0480018985.01.T01:exon:8056;Parent=MsG0480018985.01.T01 |
| Chr4 | exon | 12873867 | 12873926 | 12873867 | ID=MsG0480018985.01.T01:exon:8057;Parent=MsG0480018985.01.T01 |
| Chr4 | exon | 12874249 | 12874313 | 12874249 | ID=MsG0480018985.01.T01:exon:8058;Parent=MsG0480018985.01.T01 |
| Chr4 | exon | 12874428 | 12874631 | 12874428 | ID=MsG0480018985.01.T01:exon:8059;Parent=MsG0480018985.01.T01 |
| Chr4 | CDS | 12872715 | 12872943 | 12872715 | ID=MsG0480018985.01.T01:cds;Parent=MsG0480018985.01.T01 |
| Chr4 | CDS | 12873867 | 12873926 | 12873867 | ID=MsG0480018985.01.T01:cds;Parent=MsG0480018985.01.T01 |
| Chr4 | CDS | 12874249 | 12874313 | 12874249 | ID=MsG0480018985.01.T01:cds;Parent=MsG0480018985.01.T01 |
| Chr4 | CDS | 12874428 | 12874511 | 12874428 | ID=MsG0480018985.01.T01:cds;Parent=MsG0480018985.01.T01 |
| Chr4 | three_prime_UTR | 12874512 | 12874631 | 12874512 | ID=MsG0480018985.01.T01:three_prime_utr;Parent=MsG0480018985.01.T01 |
| Gene Sequence |
| Protein sequence |
