Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048761.01.T01 | XP_019461676.1 | 76.316 | 76 | 16 | 1 | 45 | 120 | 27 | 100 | 7.39E-30 | 116 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048761.01.T01 | P35135 | 96.078 | 51 | 2 | 0 | 70 | 120 | 1 | 51 | 1.46E-30 | 109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048761.01.T01 | A0A7J8ZQ38 | 76.712 | 73 | 15 | 1 | 48 | 120 | 20 | 90 | 2.32e-29 | 114 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048748.01 | MsG0080048761.01 | -0.809136 | 2.196869e-50 | 1.279526e-47 |
| MsG0080048761.01 | MsG0080048849.01 | -0.856162 | 3.876736e-62 | 9.167317e-59 |
| MsG0080048761.01 | MsG0080048865.01 | -0.814480 | 1.507997e-51 | 1.013045e-48 |
| MsG0080048761.01 | MsG0080048878.01 | -0.820944 | 5.247825e-53 | 4.211395e-50 |
| MsG0080048761.01 | MsG0080049069.01 | -0.805341 | 1.398954e-49 | 7.382639e-47 |
| MsG0080048761.01 | MsG0180000152.01 | -0.810544 | 1.093508e-50 | 6.609932e-48 |
| MsG0080048761.01 | MsG0180000240.01 | 0.803170 | 3.962010e-49 | 1.977339e-46 |
| MsG0080048761.01 | MsG0180000546.01 | -0.805518 | 1.284028e-49 | 6.806964e-47 |
| MsG0080048761.01 | MsG0180000828.01 | -0.805669 | 1.194017e-49 | 6.354671e-47 |
| MsG0080048761.01 | MsG0180003309.01 | 0.843220 | 1.601739e-58 | 2.488718e-55 |
| MsG0080048761.01 | MsG0180003697.01 | -0.839355 | 1.665223e-57 | 2.293914e-54 |
| MsG0080048761.01 | MsG0180004025.01 | -0.841831 | 3.743397e-58 | 5.568131e-55 |
| MsG0080048761.01 | MsG0180005303.01 | 0.809119 | 2.214684e-50 | 1.289314e-47 |
| MsG0080048761.01 | MsG0180005424.01 | -0.801758 | 7.742342e-49 | 3.727300e-46 |
| MsG0080048761.01 | MsG0180005927.01 | -0.803857 | 2.852921e-49 | 1.449242e-46 |
| MsG0080048761.01 | MsG0180006096.01 | -0.836169 | 1.095188e-56 | 1.369178e-53 |
| MsG0080048761.01 | MsG0180006144.01 | -0.805138 | 1.542644e-49 | 8.098880e-47 |
| MsG0080048761.01 | MsG0180006251.01 | -0.805306 | 1.422934e-49 | 7.502381e-47 |
| MsG0080048761.01 | MsG0280006306.01 | 0.803903 | 2.792043e-49 | 1.419984e-46 |
| MsG0080048761.01 | MsG0280006346.01 | 0.812448 | 4.218303e-51 | 2.682946e-48 |
| MsG0080048761.01 | MsG0280006526.01 | 0.808222 | 3.443367e-50 | 1.957737e-47 |
| MsG0080048761.01 | MsG0280006711.01 | 0.826114 | 3.239353e-54 | 3.010026e-51 |
| MsG0080048761.01 | MsG0280007193.01 | 0.805578 | 1.247833e-49 | 6.625344e-47 |
| MsG0080048761.01 | MsG0280007224.01 | 0.874435 | 6.771206e-68 | 3.048047e-64 |
| MsG0080048761.01 | MsG0280007763.01 | -0.834655 | 2.644125e-56 | 3.158049e-53 |
| MsG0080048761.01 | MsG0280008660.01 | 0.852515 | 4.388645e-61 | 9.192794e-58 |
| MsG0080048761.01 | MsG0280008928.01 | -0.813900 | 2.025105e-51 | 1.339148e-48 |
| MsG0080048761.01 | MsG0280008929.01 | -0.835939 | 1.252700e-56 | 1.555010e-53 |
| MsG0080048761.01 | MsG0280009685.01 | -0.801575 | 8.440915e-49 | 4.044983e-46 |
| MsG0080048761.01 | MsG0280010288.01 | -0.810220 | 1.284506e-50 | 7.698069e-48 |
| MsG0080048761.01 | MsG0280010532.01 | 0.850822 | 1.323992e-60 | 2.626593e-57 |
| MsG0080048761.01 | MsG0280010604.01 | 0.811112 | 8.240585e-51 | 5.057275e-48 |
| MsG0080048761.01 | MsG0280011059.01 | 0.845337 | 4.323904e-59 | 7.182795e-56 |
| MsG0080048761.01 | MsG0280011255.01 | -0.815277 | 1.003918e-51 | 6.891029e-49 |
| MsG0080048761.01 | MsG0280011304.01 | -0.809470 | 1.862221e-50 | 1.094292e-47 |
| MsG0080048761.01 | MsG0280011376.01 | -0.800783 | 1.225746e-48 | 5.757326e-46 |
| MsG0080048761.01 | MsG0280011415.01 | -0.824554 | 7.580295e-54 | 6.737185e-51 |
| MsG0080048761.01 | MsG0380011516.01 | -0.808736 | 2.674477e-50 | 1.541056e-47 |
| MsG0080048761.01 | MsG0380012005.01 | -0.835634 | 1.496619e-56 | 1.840839e-53 |
| MsG0080048761.01 | MsG0380012007.01 | -0.807746 | 4.347936e-50 | 2.441277e-47 |
| MsG0080048761.01 | MsG0380012012.01 | -0.802223 | 6.212738e-49 | 3.026643e-46 |
| MsG0080048761.01 | MsG0380012122.01 | -0.819136 | 1.360757e-52 | 1.038354e-49 |
| MsG0080048761.01 | MsG0380014240.01 | -0.821636 | 3.634244e-53 | 2.973051e-50 |
| MsG0080048761.01 | MsG0380015056.01 | 0.807285 | 5.445393e-50 | 3.021067e-47 |
| MsG0080048761.01 | MsG0380015066.01 | 0.827090 | 1.895072e-54 | 1.811020e-51 |
| MsG0080048761.01 | MsG0380015216.01 | -0.812857 | 3.433265e-51 | 2.206989e-48 |
| MsG0080048761.01 | MsG0380015533.01 | -0.824747 | 6.827939e-54 | 6.102568e-51 |
| MsG0080048761.01 | MsG0380015703.01 | -0.850509 | 1.622104e-60 | 3.184408e-57 |
| MsG0080048761.01 | MsG0380015847.01 | 0.812180 | 4.827337e-51 | 3.048045e-48 |
| MsG0080048761.01 | MsG0380015849.01 | 0.804020 | 2.639823e-49 | 1.346579e-46 |
| MsG0080048761.01 | MsG0380015965.01 | -0.802783 | 4.763033e-49 | 2.353828e-46 |
| MsG0080048761.01 | MsG0380016004.01 | -0.811090 | 8.330672e-51 | 5.109684e-48 |
| MsG0080048761.01 | MsG0380016064.01 | -0.804791 | 1.823360e-49 | 9.487750e-47 |
| MsG0080048761.01 | MsG0380016191.01 | 0.869821 | 2.322415e-66 | 8.835152e-63 |
| MsG0080048761.01 | MsG0380016347.01 | 0.802381 | 5.763500e-49 | 2.819321e-46 |
| MsG0080048761.01 | MsG0380016820.01 | -0.851174 | 1.053963e-60 | 2.114979e-57 |
| MsG0080048761.01 | MsG0380017023.01 | -0.837694 | 4.469802e-57 | 5.852782e-54 |
| MsG0080048761.01 | MsG0380017085.01 | -0.810808 | 9.587242e-51 | 5.836426e-48 |
| MsG0080048761.01 | MsG0380017178.01 | 0.867302 | 1.512326e-65 | 5.254952e-62 |
| MsG0080048761.01 | MsG0380017263.01 | 0.841744 | 3.945798e-58 | 5.852878e-55 |
| MsG0080048761.01 | MsG0380017437.01 | 0.841355 | 4.996862e-58 | 7.322944e-55 |
| MsG0080048761.01 | MsG0480018183.01 | -0.805619 | 1.222987e-49 | 6.500404e-47 |
| MsG0080048761.01 | MsG0480018207.01 | 0.812262 | 4.632807e-51 | 2.931786e-48 |
| MsG0080048761.01 | MsG0480018402.01 | -0.812942 | 3.289278e-51 | 2.119214e-48 |
| MsG0080048761.01 | MsG0480018426.01 | -0.807931 | 3.972374e-50 | 2.241045e-47 |
| MsG0080048761.01 | MsG0480018911.01 | -0.815700 | 8.082347e-52 | 5.612647e-49 |
| MsG0080048761.01 | MsG0480019384.01 | -0.804298 | 2.310194e-49 | 1.186866e-46 |
| MsG0080048761.01 | MsG0480019408.01 | -0.811905 | 5.542357e-51 | 3.473246e-48 |
| MsG0080048761.01 | MsG0480019689.01 | 0.844132 | 9.134566e-59 | 1.460644e-55 |
| MsG0080048761.01 | MsG0480020024.01 | -0.825625 | 4.233892e-54 | 3.879723e-51 |
| MsG0080048761.01 | MsG0480020935.01 | 0.812171 | 4.848762e-51 | 3.060808e-48 |
| MsG0080048761.01 | MsG0480021056.01 | -0.801844 | 7.433715e-49 | 3.586810e-46 |
| MsG0080048761.01 | MsG0480021280.01 | -0.812962 | 3.256283e-51 | 2.099084e-48 |
| MsG0080048761.01 | MsG0480021776.01 | 0.867100 | 1.755587e-65 | 6.055528e-62 |
| MsG0080048761.01 | MsG0480021869.01 | -0.800816 | 1.207027e-48 | 5.674166e-46 |
| MsG0080048761.01 | MsG0480022615.01 | 0.823391 | 1.420285e-53 | 1.221161e-50 |
| MsG0080048761.01 | MsG0480023162.01 | -0.808149 | 3.568905e-50 | 2.025239e-47 |
| MsG0080048761.01 | MsG0480023488.01 | -0.803759 | 2.990505e-49 | 1.515266e-46 |
| MsG0080048761.01 | MsG0480023652.01 | -0.829249 | 5.720271e-55 | 5.822895e-52 |
| MsG0080048761.01 | MsG0480023660.01 | -0.827058 | 1.929570e-54 | 1.842181e-51 |
| MsG0080048761.01 | MsG0480023814.01 | -0.807842 | 4.147788e-50 | 2.334659e-47 |
| MsG0080048761.01 | MsG0480023936.01 | 0.823316 | 1.479219e-53 | 1.269230e-50 |
| MsG0080048761.01 | MsG0580024161.01 | -0.800648 | 1.305877e-48 | 6.113089e-46 |
| MsG0080048761.01 | MsG0580024363.01 | 0.859001 | 5.591860e-63 | 1.454841e-59 |
| MsG0080048761.01 | MsG0580024495.01 | -0.800065 | 1.716456e-48 | 7.916987e-46 |
| MsG0080048761.01 | MsG0580024788.01 | -0.805448 | 1.328498e-49 | 7.030263e-47 |
| MsG0080048761.01 | MsG0580024790.01 | 0.838077 | 3.563191e-57 | 4.719925e-54 |
| MsG0080048761.01 | MsG0580024928.01 | 0.885274 | 9.368193e-72 | 6.389906e-68 |
| MsG0080048761.01 | MsG0580024935.01 | -0.808943 | 2.415819e-50 | 1.399699e-47 |
| MsG0080048761.01 | MsG0580025407.01 | 0.819453 | 1.152245e-52 | 8.870765e-50 |
| MsG0080048761.01 | MsG0580025467.01 | -0.819889 | 9.161455e-53 | 7.139461e-50 |
| MsG0080048761.01 | MsG0580025627.01 | -0.807811 | 4.212661e-50 | 2.369237e-47 |
| MsG0080048761.01 | MsG0580025832.01 | -0.802946 | 4.406986e-49 | 2.186809e-46 |
| MsG0080048761.01 | MsG0580026511.01 | -0.836250 | 1.044687e-56 | 1.309352e-53 |
| MsG0080048761.01 | MsG0580027103.01 | -0.821724 | 3.467380e-53 | 2.843694e-50 |
| MsG0080048761.01 | MsG0580027928.01 | 0.852069 | 5.877903e-61 | 1.213888e-57 |
| MsG0080048761.01 | MsG0580028630.01 | -0.810995 | 8.733699e-51 | 5.344067e-48 |
| MsG0080048761.01 | MsG0580028901.01 | -0.818134 | 2.297044e-52 | 1.705042e-49 |
| MsG0080048761.01 | MsG0580029924.01 | -0.821259 | 4.440595e-53 | 3.594506e-50 |
| MsG0080048761.01 | MsG0580029925.01 | -0.864992 | 8.154446e-65 | 2.611535e-61 |
| MsG0080048761.01 | MsG0680030356.01 | 0.833810 | 4.306921e-56 | 5.015792e-53 |
| MsG0080048761.01 | MsG0680030636.01 | -0.862652 | 4.353283e-64 | 1.284391e-60 |
| MsG0080048761.01 | MsG0680031334.01 | -0.821617 | 3.671322e-53 | 3.001686e-50 |
| MsG0080048761.01 | MsG0680032058.01 | -0.801221 | 9.973073e-49 | 4.736752e-46 |
| MsG0080048761.01 | MsG0680032203.01 | -0.807214 | 5.639535e-50 | 3.122879e-47 |
| MsG0080048761.01 | MsG0680032204.01 | -0.837424 | 5.240473e-57 | 6.804290e-54 |
| MsG0080048761.01 | MsG0680035765.01 | -0.834772 | 2.470896e-56 | 2.961420e-53 |
| MsG0080048761.01 | MsG0780035948.01 | -0.802305 | 5.975026e-49 | 2.917147e-46 |
| MsG0080048761.01 | MsG0780035960.01 | -0.815691 | 8.121211e-52 | 5.638263e-49 |
| MsG0080048761.01 | MsG0780036190.01 | -0.813542 | 2.427969e-51 | 1.590106e-48 |
| MsG0080048761.01 | MsG0780036705.01 | -0.821452 | 4.007425e-53 | 3.261493e-50 |
| MsG0080048761.01 | MsG0780037093.01 | -0.801353 | 9.370060e-49 | 4.465336e-46 |
| MsG0080048761.01 | MsG0780037457.01 | -0.804973 | 1.670190e-49 | 8.731632e-47 |
| MsG0080048761.01 | MsG0780037506.01 | 0.805005 | 1.645111e-49 | 8.607033e-47 |
| MsG0080048761.01 | MsG0780038309.01 | 0.833897 | 4.096678e-56 | 4.783540e-53 |
| MsG0080048761.01 | MsG0780038473.01 | 0.840239 | 9.800509e-58 | 1.387484e-54 |
| MsG0080048761.01 | MsG0780038584.01 | 0.813345 | 2.683300e-51 | 1.747894e-48 |
| MsG0080048761.01 | MsG0780039178.01 | -0.805898 | 1.068645e-49 | 5.721025e-47 |
| MsG0080048761.01 | MsG0780039429.01 | -0.830980 | 2.163622e-55 | 2.316223e-52 |
| MsG0080048761.01 | MsG0780039867.01 | 0.826676 | 2.380373e-54 | 2.247541e-51 |
| MsG0080048761.01 | MsG0780040295.01 | 0.800959 | 1.128219e-48 | 5.323458e-46 |
| MsG0080048761.01 | MsG0780040566.01 | 0.871557 | 6.242444e-67 | 2.529013e-63 |
| MsG0080048761.01 | MsG0780040576.01 | 0.862904 | 3.640412e-64 | 1.083670e-60 |
| MsG0080048761.01 | MsG0780040596.01 | -0.830789 | 2.409436e-55 | 2.564919e-52 |
| MsG0080048761.01 | MsG0780040763.01 | -0.826481 | 2.649625e-54 | 2.487825e-51 |
| MsG0080048761.01 | MsG0780041137.01 | -0.800885 | 1.168349e-48 | 5.502442e-46 |
| MsG0080048761.01 | MsG0780041729.01 | 0.836669 | 8.174123e-57 | 1.037188e-53 |
| MsG0080048761.01 | MsG0780041747.01 | -0.840722 | 7.326333e-58 | 1.052832e-54 |
| MsG0080048761.01 | MsG0880041852.01 | -0.810318 | 1.223273e-50 | 7.350381e-48 |
| MsG0080048761.01 | MsG0880042062.01 | -0.826127 | 3.217256e-54 | 2.990532e-51 |
| MsG0080048761.01 | MsG0880042134.01 | -0.816295 | 5.953419e-52 | 4.202269e-49 |
| MsG0080048761.01 | MsG0880042987.01 | 0.805836 | 1.101393e-49 | 5.886940e-47 |
| MsG0080048761.01 | MsG0880043905.01 | -0.815000 | 1.156413e-51 | 7.878247e-49 |
| MsG0080048761.01 | MsG0880044142.01 | -0.800175 | 1.630424e-48 | 7.540923e-46 |
| MsG0080048761.01 | MsG0880044611.01 | 0.804442 | 2.156432e-49 | 1.111935e-46 |
| MsG0080048761.01 | MsG0880045387.01 | -0.804109 | 2.529159e-49 | 1.293064e-46 |
| MsG0080048761.01 | MsG0880045669.01 | 0.814947 | 1.188562e-51 | 8.085038e-49 |
| MsG0080048761.01 | MsG0880045992.01 | -0.829031 | 6.462697e-55 | 6.535145e-52 |
| MsG0080048761.01 | MsG0880046569.01 | 0.832434 | 9.472923e-56 | 1.058674e-52 |
| MsG0080048761.01 | MsG0880046930.01 | -0.813326 | 2.709034e-51 | 1.763742e-48 |
| MsG0080048761.01 | MsG0880047481.01 | 0.842756 | 2.129625e-58 | 3.260797e-55 |
| MsG0080048761.01 | MsG0880047703.01 | -0.803042 | 4.210412e-49 | 2.094362e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048761.01.T01 | MTR_3g062450 | 98.039 | 51 | 1 | 0 | 70 | 120 | 1 | 51 | 2.96e-32 | 111 |
| MsG0080048761.01.T01 | MTR_7g116940 | 96.078 | 51 | 2 | 0 | 70 | 120 | 1 | 51 | 8.01e-32 | 109 |
| MsG0080048761.01.T01 | MTR_5g075580 | 96.078 | 51 | 2 | 0 | 70 | 120 | 1 | 51 | 1.48e-31 | 109 |
| MsG0080048761.01.T01 | MTR_7g116940 | 96.078 | 51 | 2 | 0 | 70 | 120 | 1 | 51 | 1.63e-31 | 109 |
| MsG0080048761.01.T01 | MTR_7g116940 | 96.078 | 51 | 2 | 0 | 70 | 120 | 1 | 51 | 2.57e-31 | 109 |
| MsG0080048761.01.T01 | MTR_1g021150 | 90.196 | 51 | 5 | 0 | 70 | 120 | 1 | 51 | 1.06e-29 | 104 |
| MsG0080048761.01.T01 | MTR_4g073240 | 88.235 | 51 | 6 | 0 | 70 | 120 | 1 | 51 | 3.12e-29 | 103 |
| MsG0080048761.01.T01 | MTR_8g071040 | 88.235 | 51 | 6 | 0 | 70 | 120 | 1 | 51 | 2.83e-28 | 101 |
| MsG0080048761.01.T01 | MTR_8g085690 | 49.057 | 53 | 27 | 0 | 68 | 120 | 20 | 72 | 1.15e-14 | 66.6 |
| MsG0080048761.01.T01 | MTR_1g021150 | 89.655 | 29 | 3 | 0 | 92 | 120 | 31 | 59 | 9.62e-14 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048761.01.T01 | AT4G27960 | 63.333 | 90 | 16 | 2 | 39 | 120 | 1 | 81 | 1.05e-31 | 110 |
| MsG0080048761.01.T01 | AT5G41700 | 94.118 | 51 | 3 | 0 | 70 | 120 | 1 | 51 | 1.91e-31 | 109 |
| MsG0080048761.01.T01 | AT5G53300 | 94.118 | 51 | 3 | 0 | 70 | 120 | 1 | 51 | 3.33e-31 | 107 |
| MsG0080048761.01.T01 | AT4G27960 | 94.118 | 51 | 3 | 0 | 70 | 120 | 1 | 51 | 3.43e-31 | 108 |
| MsG0080048761.01.T01 | AT1G64230 | 94.118 | 51 | 3 | 0 | 70 | 120 | 1 | 51 | 3.83e-31 | 108 |
| MsG0080048761.01.T01 | AT1G64230 | 94.118 | 51 | 3 | 0 | 70 | 120 | 1 | 51 | 3.83e-31 | 108 |
| MsG0080048761.01.T01 | AT5G53300 | 94.118 | 51 | 3 | 0 | 70 | 120 | 1 | 51 | 4.27e-31 | 108 |
| MsG0080048761.01.T01 | AT5G53300 | 94.118 | 51 | 3 | 0 | 70 | 120 | 1 | 51 | 4.27e-31 | 108 |
| MsG0080048761.01.T01 | AT5G53300 | 94.118 | 51 | 3 | 0 | 70 | 120 | 1 | 51 | 4.27e-31 | 108 |
| MsG0080048761.01.T01 | AT5G41700 | 94.118 | 51 | 3 | 0 | 70 | 120 | 1 | 51 | 4.91e-31 | 108 |
| MsG0080048761.01.T01 | AT5G41700 | 94.118 | 51 | 3 | 0 | 70 | 120 | 1 | 51 | 4.91e-31 | 108 |
| MsG0080048761.01.T01 | AT5G41700 | 94.118 | 51 | 3 | 0 | 70 | 120 | 1 | 51 | 4.91e-31 | 108 |
| MsG0080048761.01.T01 | AT3G08690 | 90.196 | 51 | 5 | 0 | 70 | 120 | 1 | 51 | 7.45e-30 | 105 |
| MsG0080048761.01.T01 | AT3G08690 | 90.196 | 51 | 5 | 0 | 70 | 120 | 1 | 51 | 7.45e-30 | 105 |
| MsG0080048761.01.T01 | AT5G41700 | 90.385 | 52 | 4 | 1 | 70 | 120 | 1 | 52 | 2.77e-28 | 101 |
| MsG0080048761.01.T01 | AT1G64230 | 78.333 | 60 | 4 | 1 | 70 | 120 | 1 | 60 | 9.27e-27 | 97.8 |
| MsG0080048761.01.T01 | AT2G16740 | 78.431 | 51 | 11 | 0 | 70 | 120 | 1 | 51 | 2.23e-26 | 96.7 |
| MsG0080048761.01.T01 | AT5G56150 | 80.392 | 51 | 10 | 0 | 70 | 120 | 1 | 51 | 5.12e-26 | 94.4 |
| MsG0080048761.01.T01 | AT5G56150 | 80.392 | 51 | 10 | 0 | 70 | 120 | 1 | 51 | 9.06e-26 | 95.1 |
| MsG0080048761.01.T01 | AT3G08700 | 76.471 | 51 | 11 | 1 | 70 | 119 | 1 | 51 | 1.60e-23 | 89.4 |
| MsG0080048761.01.T01 | AT3G08700 | 76.471 | 51 | 11 | 1 | 70 | 119 | 1 | 51 | 1.60e-23 | 89.4 |
| MsG0080048761.01.T01 | AT1G64230 | 50.538 | 93 | 4 | 1 | 70 | 120 | 1 | 93 | 6.76e-22 | 86.3 |
| MsG0080048761.01.T01 | AT1G64230 | 50.538 | 93 | 4 | 1 | 70 | 120 | 1 | 93 | 6.76e-22 | 86.3 |
| MsG0080048761.01.T01 | AT3G13550 | 50.943 | 53 | 26 | 0 | 68 | 120 | 34 | 86 | 2.40e-16 | 71.2 |
| MsG0080048761.01.T01 | AT3G13550 | 50.943 | 53 | 26 | 0 | 68 | 120 | 34 | 86 | 3.30e-16 | 71.2 |
| MsG0080048761.01.T01 | AT5G62540 | 46.939 | 49 | 26 | 0 | 71 | 119 | 5 | 53 | 2.96e-11 | 57.4 |
Find 77 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGAGAGAATGAGAGAAAA+AGG | 0.204795 | contig425end:-21711 | None:intergenic |
| CAATACTGCAGGTTGCATTT+AGG | 0.246319 | contig425end:+23637 | MsG0080048761.01.T01:intron |
| AATCGAAAGAAGGGATAATA+AGG | 0.289702 | contig425end:-21732 | None:intergenic |
| TTGTACATATGTGCAATTTC+AGG | 0.297625 | contig425end:-24429 | None:intergenic |
| AATACCTTTGGTGGCTTGAA+TGG | 0.326318 | contig425end:-22392 | None:intergenic |
| GTGAAAATTCTTAAGACATC+TGG | 0.326730 | contig425end:+24651 | MsG0080048761.01.T01:three_prime_UTR |
| CACAAGCGGGTCATCGGGAT+TGG | 0.353907 | contig425end:-24406 | None:intergenic |
| ATCTTCTCTGTTTGTCGTAA+TGG | 0.356690 | contig425end:-21654 | None:intergenic |
| TATTTGTCTCGACATTCTTA+AGG | 0.371764 | contig425end:+23697 | MsG0080048761.01.T01:three_prime_UTR |
| GGTGGCTTGAATGGATAATC+AGG | 0.384580 | contig425end:-22383 | None:intergenic |
| GTCAATCTGCTCATTGTTGA+CGG | 0.386180 | contig425end:+24380 | MsG0080048761.01.T01:three_prime_UTR |
| TTTAACAGCGAAGGAGGAAT+TGG | 0.399882 | contig425end:-24516 | None:intergenic |
| GCGTGCGGTGGCTTCATACT+TGG | 0.404055 | contig425end:-24463 | None:intergenic |
| CTTCCATTGCTGTTGATGTT+GGG | 0.413595 | contig425end:-23674 | None:intergenic |
| ATTAGGGTTGAAATTGAAAA+GGG | 0.420801 | contig425end:-21780 | None:intergenic |
| TTCATTTATCATCGCTGCTT+GGG | 0.423487 | contig425end:-24705 | None:intergenic |
| TGTCGTAATGGAATGTGTTT+GGG | 0.427923 | contig425end:-21642 | None:intergenic |
| TTGTCGTAATGGAATGTGTT+TGG | 0.428517 | contig425end:-21643 | None:intergenic |
| ACAAGCGGGTCATCGGGATT+GGG | 0.433760 | contig425end:-24405 | None:intergenic |
| ACTAAATCAAACCTTGGAAA+TGG | 0.438561 | contig425end:-23741 | None:intergenic |
| TCAGGCACAAGCGGGTCATC+GGG | 0.450503 | contig425end:-24411 | None:intergenic |
| AGAAGAAGAAAATCGAAAGA+AGG | 0.453266 | contig425end:-21742 | None:intergenic |
| GAAGAAGAAAATCGAAAGAA+GGG | 0.456140 | contig425end:-21741 | None:intergenic |
| ATGAAGCCACCGCACGCAGC+TGG | 0.456609 | contig425end:+24469 | MsG0080048761.01.T01:three_prime_UTR |
| TAGGGTTTCAATACCTTTGG+TGG | 0.458014 | contig425end:-22401 | None:intergenic |
| GATTAGGGTTGAAATTGAAA+AGG | 0.459907 | contig425end:-21781 | None:intergenic |
| TTCAGGCACAAGCGGGTCAT+CGG | 0.461878 | contig425end:-24412 | None:intergenic |
| TTTCATTTATCATCGCTGCT+TGG | 0.470863 | contig425end:-24706 | None:intergenic |
| AACAAACATAATTCAATCTC+AGG | 0.474332 | contig425end:-24777 | None:intergenic |
| TGGAACTCAACCATGGCAAT+GGG | 0.477736 | contig425end:+24612 | MsG0080048761.01.T01:three_prime_UTR |
| GCAGGTTGCATTTAGGACTA+AGG | 0.478226 | contig425end:+23644 | MsG0080048761.01.T01:intron |
| ACCTTGGAAATGGTCAGTGC+AGG | 0.479512 | contig425end:-23731 | None:intergenic |
| TCATTGGCAAGCAACAATCA+TGG | 0.479981 | contig425end:+22306 | MsG0080048761.01.T01:CDS |
| TCTCCCCTTTGATTTGAGCA+TGG | 0.493500 | contig425end:+21826 | MsG0080048761.01.T01:CDS |
| TGGCTGAGGACATGTTTCAT+TGG | 0.495052 | contig425end:+22290 | MsG0080048761.01.T01:CDS |
| CGATGCCATGCTCAAATCAA+AGG | 0.498135 | contig425end:-21831 | None:intergenic |
| ACTTCCATTGCTGTTGATGT+TGG | 0.507571 | contig425end:-23675 | None:intergenic |
| CATTGGCAAGCAACAATCAT+GGG | 0.510542 | contig425end:+22307 | MsG0080048761.01.T01:CDS |
| CCCTGCACTGACCATTTCCA+AGG | 0.514922 | contig425end:+23730 | MsG0080048761.01.T01:three_prime_UTR |
| CCACCAACATCATGCAGTGC+AGG | 0.515198 | contig425end:+21893 | MsG0080048761.01.T01:CDS |
| ATGGAACTCAACCATGGCAA+TGG | 0.520736 | contig425end:+24611 | MsG0080048761.01.T01:three_prime_UTR |
| CCTGCACTGCATGATGTTGG+TGG | 0.521666 | contig425end:-21893 | None:intergenic |
| CCATTGCTGTTGATGTTGGG+TGG | 0.530871 | contig425end:-23671 | None:intergenic |
| AAAACACACCACCAGCATAA+GGG | 0.532990 | contig425end:-22342 | None:intergenic |
| ATTTGAGCATGGCATCGAAA+CGG | 0.533369 | contig425end:+21837 | MsG0080048761.01.T01:CDS |
| CTGTGTCCAGCTGCGTGCGG+TGG | 0.538680 | contig425end:-24475 | None:intergenic |
| TCACCTGCACTGCATGATGT+TGG | 0.540978 | contig425end:-21896 | None:intergenic |
| CACATATGTACAAGACTGAC+AGG | 0.541007 | contig425end:+24439 | MsG0080048761.01.T01:three_prime_UTR |
| GATGCCATGCTCAAATCAAA+GGG | 0.547382 | contig425end:-21830 | None:intergenic |
| CCTGCTGATAGCCCTTATGC+TGG | 0.566650 | contig425end:+22331 | MsG0080048761.01.T01:CDS |
| CCAGCATAAGGGCTATCAGC+AGG | 0.567868 | contig425end:-22331 | None:intergenic |
| TTACATAAAACATAAATGCA+CGG | 0.568066 | contig425end:-24544 | None:intergenic |
| TGAAACATGTCCTCAGCCAC+AGG | 0.579671 | contig425end:-22286 | None:intergenic |
| GTGCAATTTCAGGCACAAGC+GGG | 0.582074 | contig425end:-24419 | None:intergenic |
| CCTTGGAAATGGTCAGTGCA+GGG | 0.590131 | contig425end:-23730 | None:intergenic |
| ATAATCAATTCCCATTGCCA+TGG | 0.591438 | contig425end:-24622 | None:intergenic |
| CTGGACACAGAAGTATGCCA+TGG | 0.597546 | contig425end:+24488 | MsG0080048761.01.T01:three_prime_UTR |
| GCAAATCCTTGAGCTCCTTG+AGG | 0.601494 | contig425end:-21862 | None:intergenic |
| ACGGTTGCATTTAACAGCGA+AGG | 0.603135 | contig425end:-24525 | None:intergenic |
| GTTGCATTTAACAGCGAAGG+AGG | 0.604567 | contig425end:-24522 | None:intergenic |
| ACGGATCCTCAAGGAGCTCA+AGG | 0.606874 | contig425end:+21856 | MsG0080048761.01.T01:CDS |
| AGGAGGAATTGGTCATCCCA+TGG | 0.622867 | contig425end:-24505 | None:intergenic |
| TCGACATTCTTAAGGAACAA+TGG | 0.626316 | contig425end:+23705 | MsG0080048761.01.T01:three_prime_UTR |
| GGAGCTCAAGGATTTGCAGA+AGG | 0.628349 | contig425end:+21868 | MsG0080048761.01.T01:CDS |
| CCACCCAACATCAACAGCAA+TGG | 0.629061 | contig425end:+23671 | MsG0080048761.01.T01:three_prime_UTR |
| GCTGATAGCCCTTATGCTGG+TGG | 0.629848 | contig425end:+22334 | MsG0080048761.01.T01:CDS |
| TTTGTTATTTATTGTCAACA+TGG | 0.637302 | contig425end:+24592 | MsG0080048761.01.T01:three_prime_UTR |
| GAAAATTGTAGTTACGAACA+TGG | 0.643887 | contig425end:+24725 | MsG0080048761.01.T01:three_prime_UTR |
| GGCATCGAAACGGATCCTCA+AGG | 0.650007 | contig425end:+21847 | MsG0080048761.01.T01:CDS |
| TGGACACAGAAGTATGCCAT+GGG | 0.652544 | contig425end:+24489 | MsG0080048761.01.T01:three_prime_UTR |
| AGGAACAACGAAACATCCAC+AGG | 0.659714 | contig425end:-24757 | None:intergenic |
| TGTGCAATTTCAGGCACAAG+CGG | 0.661456 | contig425end:-24420 | None:intergenic |
| AACATGGTGATTATTGCCTG+TGG | 0.665031 | contig425end:+24741 | MsG0080048761.01.T01:three_prime_UTR |
| TTATCCATTCAAGCCACCAA+AGG | 0.668003 | contig425end:+22388 | MsG0080048761.01.T01:three_prime_UTR |
| GTCAACATGGAACTCAACCA+TGG | 0.686063 | contig425end:+24605 | MsG0080048761.01.T01:three_prime_UTR |
| CTTCTGTGTCCAGCTGCGTG+CGG | 0.688818 | contig425end:-24478 | None:intergenic |
| ATGCCATGCTCAAATCAAAG+GGG | 0.742920 | contig425end:-21829 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAATTAATGATTTATATA+AGG | + | contig425end:23775-23794 | MsG0080048761.01.T01:intron | 10.0% |
| !! | TAAATGCTAATTATTATATT+TGG | + | contig425end:22815-22834 | MsG0080048761.01.T01:intron | 10.0% |
| !! | TATATGATAAAAGAAAAAAA+GGG | - | contig425end:21949-21968 | None:intergenic | 10.0% |
| !! | AAAAACAATAAAACAACAAA+AGG | - | contig425end:22067-22086 | None:intergenic | 15.0% |
| !! | AAAACAATAAAACAACAAAA+GGG | - | contig425end:22066-22085 | None:intergenic | 15.0% |
| !! | AACATATCTAACAAATAATT+TGG | - | contig425end:22174-22193 | None:intergenic | 15.0% |
| !! | CTATATGATAAAAGAAAAAA+AGG | - | contig425end:21950-21969 | None:intergenic | 15.0% |
| !! | GAAAACAGAAAAAAATAATA+TGG | - | contig425end:22682-22701 | None:intergenic | 15.0% |
| !! | TAGTATAAATAAGAAATTGT+AGG | - | contig425end:22999-23018 | None:intergenic | 15.0% |
| !! | TTGAAAAAAATAATGATCAT+TGG | + | contig425end:23208-23227 | MsG0080048761.01.T01:intron | 15.0% |
| !!! | ATTATTTGTTAGATATGTTA+TGG | + | contig425end:22175-22194 | MsG0080048761.01.T01:intron | 15.0% |
| !!! | ATTTTTAAAAAATCACTATG+AGG | + | contig425end:22714-22733 | MsG0080048761.01.T01:intron | 15.0% |
| !!! | TATTTTTTTCAATTAACACA+GGG | - | contig425end:23200-23219 | None:intergenic | 15.0% |
| !!! | TTATTTTTTTCAATTAACAC+AGG | - | contig425end:23201-23220 | None:intergenic | 15.0% |
| !!! | TTTGAAAGTTTTATTCTTTT+TGG | + | contig425end:22514-22533 | MsG0080048761.01.T01:intron | 15.0% |
| !!! | TTTTTATCAATGATTTGTTA+TGG | + | contig425end:22082-22101 | MsG0080048761.01.T01:intron | 15.0% |
| !! | AAAAAATAATGATCATTGGT+TGG | + | contig425end:23212-23231 | MsG0080048761.01.T01:intron | 20.0% |
| !! | ATTAAATCCTATCAATCATA+TGG | - | contig425end:24227-24246 | None:intergenic | 20.0% |
| !! | TTACATAAAACATAAATGCA+CGG | - | contig425end:24547-24566 | None:intergenic | 20.0% |
| !! | TTTGTTAATTGTTTGGAAAA+TGG | + | contig425end:23814-23833 | MsG0080048761.01.T01:intron | 20.0% |
| !!! | AAATCATGAATCATTTTCTT+GGG | - | contig425end:24034-24053 | None:intergenic | 20.0% |
| !!! | ATAATTTGTTGAGATTTGTT+TGG | + | contig425end:22455-22474 | MsG0080048761.01.T01:intron | 20.0% |
| !!! | TTTGTTATTTATTGTCAACA+TGG | + | contig425end:24592-24611 | MsG0080048761.01.T01:three_prime_UTR | 20.0% |
| ! | AACAAACATAATTCAATCTC+AGG | - | contig425end:24780-24799 | None:intergenic | 25.0% |
| ! | ATTAGGGTTGAAATTGAAAA+GGG | - | contig425end:21783-21802 | None:intergenic | 25.0% |
| ! | TTGAGATAATTAAAGAGCAA+GGG | - | contig425end:23036-23055 | None:intergenic | 25.0% |
| ! | TTTAAAAAATCACTATGAGG+AGG | + | contig425end:22717-22736 | MsG0080048761.01.T01:intron | 25.0% |
| !! | ATCCTAACATTCACTATTTT+AGG | + | contig425end:24350-24369 | MsG0080048761.01.T01:intron | 25.0% |
| !! | CAAATCATGAATCATTTTCT+TGG | - | contig425end:24035-24054 | None:intergenic | 25.0% |
| !! | GATGATGATTTTTGTGTTTT+AGG | + | contig425end:22262-22281 | MsG0080048761.01.T01:intron | 25.0% |
| !! | TTATGGATCTGTTATTTGAA+GGG | + | contig425end:22099-22118 | MsG0080048761.01.T01:intron | 25.0% |
| !!! | ATAGAGAACTGTGATTTTTT+TGG | + | contig425end:24078-24097 | MsG0080048761.01.T01:intron | 25.0% |
| AAAAATAATATGGTCCCTGT+CGG | - | contig425end:22672-22691 | None:intergenic | 30.0% | |
| AACATAAAACTATGTTCAGG+TGG | - | contig425end:23470-23489 | None:intergenic | 30.0% | |
| AAGTTGACCATATGATTGAT+AGG | + | contig425end:24217-24236 | MsG0080048761.01.T01:intron | 30.0% | |
| AATCGAAAGAAGGGATAATA+AGG | - | contig425end:21735-21754 | None:intergenic | 30.0% | |
| ACAACAACTAAATCAAACCT+TGG | - | contig425end:23750-23769 | None:intergenic | 30.0% | |
| ACTAAATCAAACCTTGGAAA+TGG | - | contig425end:23744-23763 | None:intergenic | 30.0% | |
| ACTATTATCAAGTCCTTACT+TGG | - | contig425end:22963-22982 | None:intergenic | 30.0% | |
| AGAAGAAGAAAATCGAAAGA+AGG | - | contig425end:21745-21764 | None:intergenic | 30.0% | |
| AGATCAGTGGAAAACAAAAA+AGG | - | contig425end:23261-23280 | None:intergenic | 30.0% | |
| ATAATTAAAGAGCAAGGGAA+TGG | - | contig425end:23031-23050 | None:intergenic | 30.0% | |
| ATGTTATGGTTTATGAAGCT+AGG | + | contig425end:22189-22208 | MsG0080048761.01.T01:intron | 30.0% | |
| CACCTAAAATAGTGAATGTT+AGG | - | contig425end:24355-24374 | None:intergenic | 30.0% | |
| CCTAACATAAAACTATGTTC+AGG | - | contig425end:23473-23492 | None:intergenic | 30.0% | |
| CTTGAGATAATTAAAGAGCA+AGG | - | contig425end:23037-23056 | None:intergenic | 30.0% | |
| GAAAATTGTAGTTACGAACA+TGG | + | contig425end:24725-24744 | MsG0080048761.01.T01:three_prime_UTR | 30.0% | |
| GAAGAAGAAAATCGAAAGAA+GGG | - | contig425end:21744-21763 | None:intergenic | 30.0% | |
| GATTAGGGTTGAAATTGAAA+AGG | - | contig425end:21784-21803 | None:intergenic | 30.0% | |
| GGTTGTTTACATGAAACTTT+AGG | + | contig425end:22145-22164 | MsG0080048761.01.T01:intron | 30.0% | |
| GTCAATATTAACAACATCCA+CGG | - | contig425end:23441-23460 | None:intergenic | 30.0% | |
| GTGAAAATTCTTAAGACATC+TGG | + | contig425end:24651-24670 | MsG0080048761.01.T01:three_prime_UTR | 30.0% | |
| GTTTGCAAACTCAATTAAAC+CGG | - | contig425end:23562-23581 | None:intergenic | 30.0% | |
| TATTTGTCTCGACATTCTTA+AGG | + | contig425end:23697-23716 | MsG0080048761.01.T01:three_prime_UTR | 30.0% | |
| TTGTACATATGTGCAATTTC+AGG | - | contig425end:24432-24451 | None:intergenic | 30.0% | |
| TTTGCAAACATCATGTAGTT+TGG | + | contig425end:23573-23592 | MsG0080048761.01.T01:intron | 30.0% | |
| TTTGTTGATGTCATTCTTGT+GGG | + | contig425end:23973-23992 | MsG0080048761.01.T01:intron | 30.0% | |
| ! | AGCTTGATCGATAATTTTGA+CGG | - | contig425end:22843-22862 | None:intergenic | 30.0% |
| ! | ATTTTCTTTTCTTGCTGATG+AGG | + | contig425end:23496-23515 | MsG0080048761.01.T01:intron | 30.0% |
| ! | GTTATGGATCTGTTATTTGA+AGG | + | contig425end:22098-22117 | MsG0080048761.01.T01:intron | 30.0% |
| ! | TTTGAGGTGATTTGGATTTA+GGG | + | contig425end:22124-22143 | MsG0080048761.01.T01:intron | 30.0% |
| ! | TTTTGTTGATGTCATTCTTG+TGG | + | contig425end:23972-23991 | MsG0080048761.01.T01:intron | 30.0% |
| !! | GACAAGCTTTGTTAATTGTT+TGG | + | contig425end:23807-23826 | MsG0080048761.01.T01:intron | 30.0% |
| !! | TGTTATTTGAAGGGTTTTTG+AGG | + | contig425end:22108-22127 | MsG0080048761.01.T01:intron | 30.0% |
| !!! | CCTGAACATAGTTTTATGTT+AGG | + | contig425end:23470-23489 | MsG0080048761.01.T01:intron | 30.0% |
| !!! | TTTTGAGGTGATTTGGATTT+AGG | + | contig425end:22123-22142 | MsG0080048761.01.T01:intron | 30.0% |
| AAAATAATATGGTCCCTGTC+GGG | - | contig425end:22671-22690 | None:intergenic | 35.0% | |
| AACAACAACATTCCAAATGC+AGG | - | contig425end:24290-24309 | None:intergenic | 35.0% | |
| ACAGATCATACATACAAGCT+AGG | - | contig425end:22423-22442 | None:intergenic | 35.0% | |
| ATAATCAATTCCCATTGCCA+TGG | - | contig425end:24625-24644 | None:intergenic | 35.0% | |
| ATCTTCTCTGTTTGTCGTAA+TGG | - | contig425end:21657-21676 | None:intergenic | 35.0% | |
| CAGATCATACATACAAGCTA+GGG | - | contig425end:22422-22441 | None:intergenic | 35.0% | |
| GAGAGAGAATGAGAGAAAAA+GGG | - | contig425end:21713-21732 | None:intergenic | 35.0% | |
| TATTTGTGTTGCAACTTGCA+AGG | + | contig425end:23110-23129 | MsG0080048761.01.T01:intron | 35.0% | |
| TCGACATTCTTAAGGAACAA+TGG | + | contig425end:23705-23724 | MsG0080048761.01.T01:three_prime_UTR | 35.0% | |
| TTATTGTCTTGCAATACTGC+AGG | + | contig425end:23626-23645 | MsG0080048761.01.T01:intron | 35.0% | |
| TTCATTTATCATCGCTGCTT+GGG | - | contig425end:24708-24727 | None:intergenic | 35.0% | |
| TTTCATTTATCATCGCTGCT+TGG | - | contig425end:24709-24728 | None:intergenic | 35.0% | |
| ! | AGAGAAGCAAACTTTTCTGA+AGG | - | contig425end:22869-22888 | None:intergenic | 35.0% |
| ! | GTTGTTGTTCTTATGTGTCA+TGG | + | contig425end:24301-24320 | MsG0080048761.01.T01:intron | 35.0% |
| ! | TGTCGTAATGGAATGTGTTT+GGG | - | contig425end:21645-21664 | None:intergenic | 35.0% |
| ! | TTGTCGTAATGGAATGTGTT+TGG | - | contig425end:21646-21665 | None:intergenic | 35.0% |
| !! | GCTTGATCGATAATTTTGAC+GGG | - | contig425end:22842-22861 | None:intergenic | 35.0% |
| !! | TTTTTGTGTTTTAGGTCCTG+TGG | + | contig425end:22270-22289 | MsG0080048761.01.T01:intron | 35.0% |
| AAAAACACACCACCAGCATA+AGG | - | contig425end:22346-22365 | None:intergenic | 40.0% | |
| AAAACACACCACCAGCATAA+GGG | - | contig425end:22345-22364 | None:intergenic | 40.0% | |
| AACATGGTGATTATTGCCTG+TGG | + | contig425end:24741-24760 | MsG0080048761.01.T01:three_prime_UTR | 40.0% | |
| AACTGGGACAAAAAGATCAG+TGG | - | contig425end:23274-23293 | None:intergenic | 40.0% | |
| ACAACATCCACGGATTTCAT+TGG | - | contig425end:23431-23450 | None:intergenic | 40.0% | |
| ACACACGCAAACTATATCTC+AGG | - | contig425end:24188-24207 | None:intergenic | 40.0% | |
| AGAATGAGAGAAAAAGGGAC+AGG | - | contig425end:21708-21727 | None:intergenic | 40.0% | |
| AGAGAGAGAGAGAGAGATTA+GGG | - | contig425end:21799-21818 | None:intergenic | 40.0% | |
| AGCTAGGGTTTCAATACCTT+TGG | - | contig425end:22407-22426 | None:intergenic | 40.0% | |
| ATCAAATCTATCTAGCCGTG+CGG | + | contig425end:22600-22619 | MsG0080048761.01.T01:intron | 40.0% | |
| ATCTCAAGCAAACAAGCTAG+TGG | + | contig425end:23049-23068 | MsG0080048761.01.T01:intron | 40.0% | |
| ATGCCATGCTCAAATCAAAG+GGG | - | contig425end:21832-21851 | None:intergenic | 40.0% | |
| CAAATGCAGGTCGTTAAACA+CGG | - | contig425end:24277-24296 | None:intergenic | 40.0% | |
| CAACAGTTTGCAATACACTC+AGG | - | contig425end:23169-23188 | None:intergenic | 40.0% | |
| CAATACTGCAGGTTGCATTT+AGG | + | contig425end:23637-23656 | MsG0080048761.01.T01:intron | 40.0% | |
| CACATATGTACAAGACTGAC+AGG | + | contig425end:24439-24458 | MsG0080048761.01.T01:three_prime_UTR | 40.0% | |
| CATTGGCAAGCAACAATCAT+GGG | + | contig425end:22307-22326 | MsG0080048761.01.T01:CDS | 40.0% | |
| CCAAGTACAGTATACTTGTC+CGG | + | contig425end:23540-23559 | MsG0080048761.01.T01:intron | 40.0% | |
| GATGCCATGCTCAAATCAAA+GGG | - | contig425end:21833-21852 | None:intergenic | 40.0% | |
| GCAATGAAAGCTTTGCATCT+TGG | - | contig425end:22791-22810 | None:intergenic | 40.0% | |
| GGAGAGAGAATGAGAGAAAA+AGG | - | contig425end:21714-21733 | None:intergenic | 40.0% | |
| GTCAATCTGCTCATTGTTGA+CGG | + | contig425end:24380-24399 | MsG0080048761.01.T01:three_prime_UTR | 40.0% | |
| TAGGGTTTCAATACCTTTGG+TGG | - | contig425end:22404-22423 | None:intergenic | 40.0% | |
| TCATTGGCAAGCAACAATCA+TGG | + | contig425end:22306-22325 | MsG0080048761.01.T01:CDS | 40.0% | |
| TCTCAAACCAATGAAATCCG+TGG | + | contig425end:23421-23440 | MsG0080048761.01.T01:intron | 40.0% | |
| TCTCAAGCAAACAAGCTAGT+GGG | + | contig425end:23050-23069 | MsG0080048761.01.T01:intron | 40.0% | |
| TTATCCATTCAAGCCACCAA+AGG | + | contig425end:22388-22407 | MsG0080048761.01.T01:three_prime_UTR | 40.0% | |
| TTGATGTCATTCTTGTGGGA+AGG | + | contig425end:23977-23996 | MsG0080048761.01.T01:intron | 40.0% | |
| TTTAACAGCGAAGGAGGAAT+TGG | - | contig425end:24519-24538 | None:intergenic | 40.0% | |
| ! | AATACCTTTGGTGGCTTGAA+TGG | - | contig425end:22395-22414 | None:intergenic | 40.0% |
| ! | ACTTCCATTGCTGTTGATGT+TGG | - | contig425end:23678-23697 | None:intergenic | 40.0% |
| ! | ATTTGAGCATGGCATCGAAA+CGG | + | contig425end:21837-21856 | MsG0080048761.01.T01:CDS | 40.0% |
| ! | CTTCCATTGCTGTTGATGTT+GGG | - | contig425end:23677-23696 | None:intergenic | 40.0% |
| ! | GACATCTGGTGCAAATTTTC+TGG | + | contig425end:24665-24684 | MsG0080048761.01.T01:three_prime_UTR | 40.0% |
| !! | GAAGCAAACTTTTCTGAAGG+CGG | - | contig425end:22866-22885 | None:intergenic | 40.0% |
| !!! | GAAGGGTTTTTGAGGTGATT+TGG | + | contig425end:22116-22135 | MsG0080048761.01.T01:intron | 40.0% |
| !!! | TATGCTGGTGGTGTGTTTTT+TGG | + | contig425end:22346-22365 | MsG0080048761.01.T01:CDS | 40.0% |
| !!! | TGTTTTGAGGGGTGAATGTT+TGG | + | contig425end:22633-22652 | MsG0080048761.01.T01:intron | 40.0% |
| AAATAGCCTGAGGCTTCTTG+AGG | - | contig425end:23095-23114 | None:intergenic | 45.0% | |
| ACATGCATGCAAGCGAAACT+GGG | - | contig425end:23290-23309 | None:intergenic | 45.0% | |
| ACGGTTGCATTTAACAGCGA+AGG | - | contig425end:24528-24547 | None:intergenic | 45.0% | |
| AGACGACAATTGTGAACGTG+TGG | - | contig425end:23319-23338 | None:intergenic | 45.0% | |
| AGGAACAACGAAACATCCAC+AGG | - | contig425end:24760-24779 | None:intergenic | 45.0% | |
| ATGGAACTCAACCATGGCAA+TGG | + | contig425end:24611-24630 | MsG0080048761.01.T01:three_prime_UTR | 45.0% | |
| CATAAAATCGATCCTCTGCG+AGG | + | contig425end:22932-22951 | MsG0080048761.01.T01:intron | 45.0% | |
| CCGGACAAGTATACTGTACT+TGG | - | contig425end:23543-23562 | None:intergenic | 45.0% | |
| CGATGCCATGCTCAAATCAA+AGG | - | contig425end:21834-21853 | None:intergenic | 45.0% | |
| CGTGTTTAACGACCTGCATT+TGG | + | contig425end:24275-24294 | MsG0080048761.01.T01:intron | 45.0% | |
| CTCAAGCAAACAAGCTAGTG+GGG | + | contig425end:23051-23070 | MsG0080048761.01.T01:intron | 45.0% | |
| GAGAGAGAGAGAGAGAGATT+AGG | - | contig425end:21800-21819 | None:intergenic | 45.0% | |
| GGTGGCTTGAATGGATAATC+AGG | - | contig425end:22386-22405 | None:intergenic | 45.0% | |
| GTCAACATGGAACTCAACCA+TGG | + | contig425end:24605-24624 | MsG0080048761.01.T01:three_prime_UTR | 45.0% | |
| GTTGCAACACAAATAGCCTG+AGG | - | contig425end:23105-23124 | None:intergenic | 45.0% | |
| GTTGCATTTAACAGCGAAGG+AGG | - | contig425end:24525-24544 | None:intergenic | 45.0% | |
| TCTTGAGGCAGGTTTATGCT+AGG | - | contig425end:23080-23099 | None:intergenic | 45.0% | |
| TGGAACTCAACCATGGCAAT+GGG | + | contig425end:24612-24631 | MsG0080048761.01.T01:three_prime_UTR | 45.0% | |
| TGGCTGAGGACATGTTTCAT+TGG | + | contig425end:22290-22309 | MsG0080048761.01.T01:CDS | 45.0% | |
| TGTGCAATTTCAGGCACAAG+CGG | - | contig425end:24423-24442 | None:intergenic | 45.0% | |
| TTGCAATACACTCAGGCTCT+CGG | - | contig425end:23162-23181 | None:intergenic | 45.0% | |
| ! | GCAGGTTGCATTTAGGACTA+AGG | + | contig425end:23644-23663 | MsG0080048761.01.T01:intron | 45.0% |
| ! | TGGACACAGAAGTATGCCAT+GGG | + | contig425end:24489-24508 | MsG0080048761.01.T01:three_prime_UTR | 45.0% |
| !! | CTCGCAGAGGATCGATTTTA+TGG | - | contig425end:22934-22953 | None:intergenic | 45.0% |
| !! | TCTCCCCTTTGATTTGAGCA+TGG | + | contig425end:21826-21845 | MsG0080048761.01.T01:CDS | 45.0% |
| !!! | ATGATTTATTTTTTAAATTA+TGG | + | contig425end:22037-22056 | MsG0080048761.01.T01:intron | 5.0% |
| !!! | TGATTTATTTTTTAAATTAT+GGG | + | contig425end:22038-22057 | MsG0080048761.01.T01:intron | 5.0% |
| AAATCTATCTAGCCGTGCGG+TGG | + | contig425end:22603-22622 | MsG0080048761.01.T01:intron | 50.0% | |
| ACCTTACCTCAATGCCGAAG+TGG | + | contig425end:23136-23155 | MsG0080048761.01.T01:intron | 50.0% | |
| ACCTTGGAAATGGTCAGTGC+AGG | - | contig425end:23734-23753 | None:intergenic | 50.0% | |
| AGAGCAAGGGAATGGACGAA+TGG | - | contig425end:23023-23042 | None:intergenic | 50.0% | |
| AGGAGGAATTGGTCATCCCA+TGG | - | contig425end:24508-24527 | None:intergenic | 50.0% | |
| CACATGCATGCAAGCGAAAC+TGG | - | contig425end:23291-23310 | None:intergenic | 50.0% | |
| CCACCCAACATCAACAGCAA+TGG | + | contig425end:23671-23690 | MsG0080048761.01.T01:three_prime_UTR | 50.0% | |
| CCTTGGAAATGGTCAGTGCA+GGG | - | contig425end:23733-23752 | None:intergenic | 50.0% | |
| CTATGAGGAGGTTCGAACCA+TGG | + | contig425end:22729-22748 | MsG0080048761.01.T01:intron | 50.0% | |
| GAGAGAAAAAGGGACAGGCA+AGG | - | contig425end:21703-21722 | None:intergenic | 50.0% | |
| GAGCAAGGGAATGGACGAAT+GGG | - | contig425end:23022-23041 | None:intergenic | 50.0% | |
| GCAAATCCTTGAGCTCCTTG+AGG | - | contig425end:21865-21884 | None:intergenic | 50.0% | |
| GGAGCTCAAGGATTTGCAGA+AGG | + | contig425end:21868-21887 | MsG0080048761.01.T01:CDS | 50.0% | |
| GTCGTGGTATTACAGCGCAT+CGG | - | contig425end:22767-22786 | None:intergenic | 50.0% | |
| GTGCAATTTCAGGCACAAGC+GGG | - | contig425end:24422-24441 | None:intergenic | 50.0% | |
| TCACCTGCACTGCATGATGT+TGG | - | contig425end:21899-21918 | None:intergenic | 50.0% | |
| TGAAACATGTCCTCAGCCAC+AGG | - | contig425end:22289-22308 | None:intergenic | 50.0% | |
| TTGAGGGGTGAATGTTTGGC+AGG | + | contig425end:22637-22656 | MsG0080048761.01.T01:intron | 50.0% | |
| ! | CCATTGCTGTTGATGTTGGG+TGG | - | contig425end:23674-23693 | None:intergenic | 50.0% |
| ! | CTGGACACAGAAGTATGCCA+TGG | + | contig425end:24488-24507 | MsG0080048761.01.T01:three_prime_UTR | 50.0% |
| !! | TGTTTTAGGTCCTGTGGCTG+AGG | + | contig425end:22276-22295 | MsG0080048761.01.T01:intron | 50.0% |
| AACCTGCCTCAAGAAGCCTC+AGG | + | contig425end:23086-23105 | MsG0080048761.01.T01:intron | 55.0% | |
| ACAAGCGGGTCATCGGGATT+GGG | - | contig425end:24408-24427 | None:intergenic | 55.0% | |
| ACGGATCCTCAAGGAGCTCA+AGG | + | contig425end:21856-21875 | MsG0080048761.01.T01:CDS | 55.0% | |
| AGCTTTGCATCTTGGCGTCG+TGG | - | contig425end:22783-22802 | None:intergenic | 55.0% | |
| CCACCAACATCATGCAGTGC+AGG | + | contig425end:21893-21912 | MsG0080048761.01.T01:CDS | 55.0% | |
| CCAGCATAAGGGCTATCAGC+AGG | - | contig425end:22334-22353 | None:intergenic | 55.0% | |
| CCTGCACTGCATGATGTTGG+TGG | - | contig425end:21896-21915 | None:intergenic | 55.0% | |
| CCTGCTGATAGCCCTTATGC+TGG | + | contig425end:22331-22350 | MsG0080048761.01.T01:CDS | 55.0% | |
| CTGCGAGGTCGTACCAAGTA+AGG | + | contig425end:22947-22966 | MsG0080048761.01.T01:intron | 55.0% | |
| GCTGATAGCCCTTATGCTGG+TGG | + | contig425end:22334-22353 | MsG0080048761.01.T01:CDS | 55.0% | |
| TACTTGGTACGACCTCGCAG+AGG | - | contig425end:22947-22966 | None:intergenic | 55.0% | |
| TTCAGGCACAAGCGGGTCAT+CGG | - | contig425end:24415-24434 | None:intergenic | 55.0% | |
| ! | ATCGGTTTACCTCGCGTCCA+TGG | - | contig425end:22749-22768 | None:intergenic | 55.0% |
| ! | CCCTGCACTGACCATTTCCA+AGG | + | contig425end:23730-23749 | MsG0080048761.01.T01:three_prime_UTR | 55.0% |
| ! | GCCACTTCGGCATTGAGGTA+AGG | - | contig425end:23140-23159 | None:intergenic | 55.0% |
| ! | GGCATCGAAACGGATCCTCA+AGG | + | contig425end:21847-21866 | MsG0080048761.01.T01:CDS | 55.0% |
| ACTCAGGCTCTCGGCCACTT+CGG | - | contig425end:23153-23172 | None:intergenic | 60.0% | |
| AGCCTGAGGCTTCTTGAGGC+AGG | - | contig425end:23091-23110 | None:intergenic | 60.0% | |
| AGGTTCGAACCATGGACGCG+AGG | + | contig425end:22737-22756 | MsG0080048761.01.T01:intron | 60.0% | |
| CACAAGCGGGTCATCGGGAT+TGG | - | contig425end:24409-24428 | None:intergenic | 60.0% | |
| CTTCTGTGTCCAGCTGCGTG+CGG | - | contig425end:24481-24500 | None:intergenic | 60.0% | |
| GCGTGCGGTGGCTTCATACT+TGG | - | contig425end:24466-24485 | None:intergenic | 60.0% | |
| TCAGGCACAAGCGGGTCATC+GGG | - | contig425end:24414-24433 | None:intergenic | 60.0% | |
| TCTATCTAGCCGTGCGGTGG+CGG | + | contig425end:22606-22625 | MsG0080048761.01.T01:intron | 60.0% | |
| TCTCGGCCACTTCGGCATTG+AGG | - | contig425end:23145-23164 | None:intergenic | 60.0% | |
| !! | GTGGCGGGGTCTGTTTTGAG+GGG | + | contig425end:22622-22641 | MsG0080048761.01.T01:intron | 60.0% |
| !!! | GGTGGCGGGGTCTGTTTTGA+GGG | + | contig425end:22621-22640 | MsG0080048761.01.T01:intron | 60.0% |
| AAACAGACCCCGCCACCGCA+CGG | - | contig425end:22618-22637 | None:intergenic | 65.0% | |
| ATGAAGCCACCGCACGCAGC+TGG | + | contig425end:24469-24488 | MsG0080048761.01.T01:three_prime_UTR | 65.0% | |
| CTATCTAGCCGTGCGGTGGC+GGG | + | contig425end:22607-22626 | MsG0080048761.01.T01:intron | 65.0% | |
| GCAGGCAGTCGATCCCGACA+GGG | + | contig425end:22655-22674 | MsG0080048761.01.T01:intron | 65.0% | |
| TATCTAGCCGTGCGGTGGCG+GGG | + | contig425end:22608-22627 | MsG0080048761.01.T01:intron | 65.0% | |
| !!! | CGGTGGCGGGGTCTGTTTTG+AGG | + | contig425end:22620-22639 | MsG0080048761.01.T01:intron | 65.0% |
| CTGTGTCCAGCTGCGTGCGG+TGG | - | contig425end:24478-24497 | None:intergenic | 70.0% | |
| GGCAGGCAGTCGATCCCGAC+AGG | + | contig425end:22654-22673 | MsG0080048761.01.T01:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| contig425end | gene | 21638 | 24804 | 21638 | ID=MsG0080048761.01;Name=MsG0080048761.01 |
| contig425end | mRNA | 21638 | 24804 | 21638 | ID=MsG0080048761.01.T01;Parent=MsG0080048761.01;Name=MsG0080048761.01.T01;_AED=0.49;_eAED=0.49;_QI=0|1|1|1|0|0|4|559|126 |
| contig425end | exon | 24372 | 24804 | 24372 | ID=MsG0080048761.01.T01:exon:13046;Parent=MsG0080048761.01.T01 |
| contig425end | exon | 23648 | 23751 | 23648 | ID=MsG0080048761.01.T01:exon:13045;Parent=MsG0080048761.01.T01 |
| contig425end | exon | 22284 | 22409 | 22284 | ID=MsG0080048761.01.T01:exon:13044;Parent=MsG0080048761.01.T01 |
| contig425end | exon | 21638 | 21914 | 21638 | ID=MsG0080048761.01.T01:exon:13043;Parent=MsG0080048761.01.T01 |
| contig425end | CDS | 21638 | 21914 | 21638 | ID=MsG0080048761.01.T01:cds;Parent=MsG0080048761.01.T01 |
| contig425end | CDS | 22284 | 22387 | 22284 | ID=MsG0080048761.01.T01:cds;Parent=MsG0080048761.01.T01 |
| contig425end | three_prime_UTR | 22388 | 22409 | 22388 | ID=MsG0080048761.01.T01:three_prime_utr;Parent=MsG0080048761.01.T01 |
| contig425end | three_prime_UTR | 23648 | 23751 | 23648 | ID=MsG0080048761.01.T01:three_prime_utr;Parent=MsG0080048761.01.T01 |
| contig425end | three_prime_UTR | 24372 | 24804 | 24372 | ID=MsG0080048761.01.T01:three_prime_utr;Parent=MsG0080048761.01.T01 |
| contig425end | mRNA | 24415 | 24537 | 24415 | ID=MsG0080048761.01.T02;Parent=MsG0080048761.01;Name=MsG0080048761.01.T02;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|40 |
| contig425end | exon | 24415 | 24537 | 24415 | ID=MsG0080048761.01.T02:exon:13047;Parent=MsG0080048761.01.T02 |
| contig425end | CDS | 24415 | 24537 | 24415 | ID=MsG0080048761.01.T02:cds;Parent=MsG0080048761.01.T02 |
| Gene Sequence |
| Protein sequence |
