AlfalfaGEDB | MsG0280011401.01

M. sativa cultivar ZhongmuNo.1 / MsG0280011401.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011401.01.T01	XP_003597896.1	79.268	164	5	1	1	164	1	135	2.20E-75	231

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011401.01.T01	Q2HUA1	79.268	164	5	1	1	164	1	135	1.05e-75	231

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048016.01	MsG0280011401.01	0.826140	3.193367e-54	2.969569e-51
MsG0080048845.01	MsG0280011401.01	0.825482	4.575423e-54	4.175553e-51
MsG0080048849.01	MsG0280011401.01	0.801622	8.254069e-49	3.960053e-46
MsG0080048938.01	MsG0280011401.01	0.852435	4.624418e-61	9.662429e-58
MsG0080049068.01	MsG0280011401.01	0.813217	2.862589e-51	1.858056e-48
MsG0080049069.01	MsG0280011401.01	0.802283	6.038410e-49	2.946349e-46
MsG0080049130.01	MsG0280011401.01	0.812558	3.991306e-51	2.545804e-48
MsG0180000114.01	MsG0280011401.01	0.858225	9.533867e-63	2.415696e-59
MsG0180000159.01	MsG0280011401.01	0.800860	1.182162e-48	5.563917e-46
MsG0180000246.01	MsG0280011401.01	0.858821	6.332317e-63	1.637404e-59
MsG0180000482.01	MsG0280011401.01	0.822077	2.872932e-53	2.379877e-50
MsG0180000599.01	MsG0280011401.01	0.849541	3.026762e-60	5.756334e-57
MsG0180000784.01	MsG0280011401.01	0.818091	2.349091e-52	1.741525e-49
MsG0180000785.01	MsG0280011401.01	0.808061	3.725629e-50	2.109194e-47
MsG0180000787.01	MsG0280011401.01	0.811360	7.280876e-51	4.497359e-48
MsG0180000814.01	MsG0280011401.01	0.822666	2.096225e-53	1.766021e-50
MsG0180000843.01	MsG0280011401.01	0.831773	1.380081e-55	1.512865e-52
MsG0180000977.01	MsG0280011401.01	0.841454	4.706055e-58	6.918868e-55
MsG0180001064.01	MsG0280011401.01	0.801794	7.609343e-49	3.666854e-46
MsG0180001100.01	MsG0280011401.01	0.901238	3.279353e-78	4.390040e-74
MsG0180001105.01	MsG0280011401.01	0.834690	2.590098e-56	3.096552e-53
MsG0180001130.01	MsG0280011401.01	0.832001	1.212462e-55	1.337934e-52
MsG0180001371.01	MsG0280011401.01	0.833981	3.901312e-56	4.567170e-53
MsG0180001594.01	MsG0280011401.01	0.803705	3.067989e-49	1.552321e-46
MsG0180001880.01	MsG0280011401.01	0.800349	1.502528e-48	6.980569e-46
MsG0180002024.01	MsG0280011401.01	0.804918	1.715397e-49	8.955519e-47
MsG0180002399.01	MsG0280011401.01	0.812116	4.984043e-51	3.141453e-48
MsG0180002700.01	MsG0280011401.01	0.807540	4.808788e-50	2.685490e-47
MsG0180003253.01	MsG0280011401.01	0.817067	3.996973e-52	2.881397e-49
MsG0180003357.01	MsG0280011401.01	0.852080	5.837319e-61	1.205942e-57
MsG0180003821.01	MsG0280011401.01	0.821430	4.054362e-53	3.297802e-50
MsG0180004025.01	MsG0280011401.01	0.822681	2.079743e-53	1.752902e-50
MsG0180004103.01	MsG0280011401.01	0.828380	9.285587e-55	9.214098e-52
MsG0180004106.01	MsG0280011401.01	0.821310	4.321816e-53	3.503515e-50
MsG0180004112.01	MsG0280011401.01	0.804436	2.162746e-49	1.115031e-46
MsG0180004246.01	MsG0280011401.01	0.847007	1.517817e-59	2.660548e-56
MsG0180004448.01	MsG0280011401.01	0.825009	5.920663e-54	5.331596e-51
MsG0180004493.01	MsG0280011401.01	0.818178	2.244934e-52	1.668409e-49
MsG0180004735.01	MsG0280011401.01	0.806307	8.767582e-50	4.742887e-47
MsG0180004934.01	MsG0280011401.01	0.818003	2.458633e-52	1.818461e-49
MsG0180005184.01	MsG0280011401.01	0.802669	5.027738e-49	2.477326e-46
MsG0180005220.01	MsG0280011401.01	0.835497	1.621624e-56	1.986501e-53
MsG0180005240.01	MsG0280011401.01	0.839947	1.167881e-57	1.638516e-54
MsG0180005292.01	MsG0280011401.01	0.811138	8.134062e-51	4.995374e-48
MsG0180005339.01	MsG0280011401.01	0.817209	3.712246e-52	2.686554e-49
MsG0180005391.01	MsG0280011401.01	0.861266	1.157415e-63	3.256031e-60
MsG0180005397.01	MsG0280011401.01	0.808536	2.951748e-50	1.692047e-47
MsG0180005408.01	MsG0280011401.01	0.841601	4.304336e-58	6.357240e-55
MsG0180005418.01	MsG0280011401.01	0.870951	9.894143e-67	3.921132e-63
MsG0180005509.01	MsG0280011401.01	0.814541	1.461647e-51	9.835153e-49
MsG0180005568.01	MsG0280011401.01	0.800469	1.420713e-48	6.620174e-46
MsG0180005803.01	MsG0280011401.01	0.824525	7.699324e-54	6.837031e-51
MsG0180005807.01	MsG0280011401.01	0.823585	1.279490e-53	1.106293e-50
MsG0180005829.01	MsG0280011401.01	0.869755	2.441357e-66	9.264226e-63
MsG0180006054.01	MsG0280011401.01	0.816123	6.505170e-52	4.569877e-49
MsG0180006096.01	MsG0280011401.01	0.802790	4.745329e-49	2.345572e-46
MsG0180006104.01	MsG0280011401.01	0.861924	7.285565e-64	2.095377e-60
MsG0280006309.01	MsG0280011401.01	0.801932	7.128816e-49	3.447297e-46
MsG0280006360.01	MsG0280011401.01	0.822188	2.708162e-53	2.250454e-50
MsG0280010564.01	MsG0280011401.01	0.866105	3.636667e-65	1.211369e-61
MsG0280010598.01	MsG0280011401.01	0.824754	6.801564e-54	6.080274e-51
MsG0280010599.01	MsG0280011401.01	0.819135	1.361321e-52	1.038759e-49
MsG0280010645.01	MsG0280011401.01	0.806899	6.573107e-50	3.610206e-47
MsG0280010916.01	MsG0280011401.01	0.825954	3.535632e-54	3.270565e-51
MsG0280010975.01	MsG0280011401.01	0.822483	2.312338e-53	1.937961e-50
MsG0280011073.01	MsG0280011401.01	0.884451	1.897123e-71	1.251884e-67
MsG0280011255.01	MsG0280011401.01	0.820617	6.240284e-53	4.961814e-50
MsG0280011401.01	MsG0380011656.01	0.806116	9.618482e-50	5.177997e-47
MsG0280011401.01	MsG0380011669.01	0.804805	1.810762e-49	9.425765e-47
MsG0280011401.01	MsG0380011744.01	0.801229	9.937837e-49	4.720943e-46
MsG0280011401.01	MsG0380012005.01	0.849013	4.244939e-60	7.938453e-57
MsG0280011401.01	MsG0380012011.01	0.815192	1.048401e-51	7.179205e-49
MsG0280011401.01	MsG0380012184.01	0.840956	6.361693e-58	9.208302e-55
MsG0280011401.01	MsG0380012331.01	0.802619	5.147625e-49	2.533232e-46
MsG0280011401.01	MsG0380012567.01	0.811684	6.188683e-51	3.855627e-48
MsG0280011401.01	MsG0380013050.01	-0.828542	8.483079e-55	8.457656e-52
MsG0280011401.01	MsG0380013342.01	0.845621	3.623181e-59	6.073365e-56
MsG0280011401.01	MsG0380014386.01	0.807480	4.952497e-50	2.761483e-47
MsG0280011401.01	MsG0380014517.01	0.808556	2.923217e-50	1.676557e-47
MsG0280011401.01	MsG0380014538.01	0.818258	2.153581e-52	1.603937e-49
MsG0280011401.01	MsG0380014727.01	0.839407	1.614285e-57	2.227339e-54
MsG0280011401.01	MsG0380014866.01	0.838146	3.418843e-57	4.538108e-54
MsG0280011401.01	MsG0380014909.01	0.816925	4.301010e-52	3.088575e-49
MsG0280011401.01	MsG0380015372.01	0.817238	3.658655e-52	2.649781e-49
MsG0280011401.01	MsG0380015382.01	0.801893	7.262343e-49	3.508572e-46
MsG0280011401.01	MsG0380015438.01	0.829191	5.908993e-55	6.004580e-52
MsG0280011401.01	MsG0380015547.01	0.805228	1.477405e-49	7.773969e-47
MsG0280011401.01	MsG0380015745.01	0.867776	1.066352e-65	3.767737e-62
MsG0280011401.01	MsG0380015847.01	-0.853192	2.810669e-61	6.023163e-58
MsG0280011401.01	MsG0380015896.01	0.823773	1.156394e-53	1.005285e-50
MsG0280011401.01	MsG0380016057.01	0.809290	2.036116e-50	1.190779e-47
MsG0280011401.01	MsG0380016194.01	0.826001	3.445724e-54	3.191640e-51
MsG0280011401.01	MsG0380016284.01	0.817268	3.601545e-52	2.610505e-49
MsG0280011401.01	MsG0380016566.01	0.823232	1.547187e-53	1.324436e-50
MsG0280011401.01	MsG0380016740.01	0.878355	3.004361e-69	1.563907e-65
MsG0280011401.01	MsG0380016762.01	0.814994	1.160357e-51	7.903771e-49
MsG0280011401.01	MsG0380017033.01	0.815091	1.103842e-51	7.538136e-49
MsG0280011401.01	MsG0380017201.01	0.808312	3.295094e-50	1.877843e-47
MsG0280011401.01	MsG0380017202.01	0.802955	4.388474e-49	2.178145e-46
MsG0280011401.01	MsG0380017215.01	0.804031	2.626132e-49	1.339956e-46
MsG0280011401.01	MsG0380017293.01	0.834469	2.944259e-56	3.497433e-53
MsG0280011401.01	MsG0380017338.01	0.842385	2.670395e-58	4.042586e-55
MsG0280011401.01	MsG0380017728.01	0.814722	1.333257e-51	9.014921e-49
MsG0280011401.01	MsG0380017931.01	0.875082	4.077023e-68	1.879521e-64
MsG0280011401.01	MsG0380018037.01	0.810737	9.935447e-51	6.037055e-48
MsG0280011401.01	MsG0380018046.01	-0.816157	6.391814e-52	4.494526e-49
MsG0280011401.01	MsG0380018069.01	0.801706	7.934719e-49	3.814950e-46
MsG0280011401.01	MsG0480018402.01	0.831060	2.068079e-55	2.219204e-52
MsG0280011401.01	MsG0480018584.01	0.803214	3.878450e-49	1.937824e-46
MsG0280011401.01	MsG0480018848.01	0.806785	6.949988e-50	3.805909e-47
MsG0280011401.01	MsG0480018911.01	0.834833	2.385108e-56	2.864132e-53
MsG0280011401.01	MsG0480019007.01	0.826447	2.699850e-54	2.532629e-51
MsG0280011401.01	MsG0480019384.01	0.803509	3.369592e-49	1.696458e-46
MsG0280011401.01	MsG0480019971.01	0.805433	1.338091e-49	7.078340e-47
MsG0280011401.01	MsG0480020024.01	0.859297	4.558196e-63	1.197965e-59
MsG0280011401.01	MsG0480020229.01	0.806038	9.989206e-50	5.366828e-47
MsG0280011401.01	MsG0480021168.01	0.825643	4.191286e-54	3.842701e-51
MsG0280011401.01	MsG0480021207.01	0.842046	3.285016e-58	4.919375e-55
MsG0280011401.01	MsG0480021294.01	0.820271	7.490731e-53	5.899662e-50
MsG0280011401.01	MsG0480021406.01	0.811919	5.501406e-51	3.448947e-48
MsG0280011401.01	MsG0480021564.01	0.847811	9.129408e-60	1.642085e-56
MsG0280011401.01	MsG0480021690.01	0.826967	2.028551e-54	1.931680e-51
MsG0280011401.01	MsG0480021817.01	0.810678	1.023103e-50	6.206880e-48
MsG0280011401.01	MsG0480021825.01	0.811110	8.248243e-51	5.061769e-48
MsG0280011401.01	MsG0480022155.01	0.846137	2.623854e-59	4.471930e-56
MsG0280011401.01	MsG0480022166.01	0.820323	7.288363e-53	5.748295e-50
MsG0280011401.01	MsG0480022178.01	0.806540	7.827974e-50	4.259948e-47
MsG0280011401.01	MsG0480022239.01	0.846507	2.080377e-59	3.589050e-56
MsG0280011401.01	MsG0480022248.01	0.810923	9.055859e-51	5.530184e-48
MsG0280011401.01	MsG0480022330.01	0.837540	4.893469e-57	6.376615e-54
MsG0280011401.01	MsG0480022401.01	0.818638	1.765375e-52	1.328709e-49
MsG0280011401.01	MsG0480022535.01	0.815785	7.738746e-52	5.386810e-49
MsG0280011401.01	MsG0480022537.01	0.841681	4.101014e-58	6.071086e-55
MsG0280011401.01	MsG0480022617.01	0.845211	4.679428e-59	7.741605e-56
MsG0280011401.01	MsG0480022624.01	0.857994	1.117056e-62	2.808919e-59
MsG0280011401.01	MsG0480022918.01	0.871494	6.549891e-67	2.647732e-63
MsG0280011401.01	MsG0480023150.01	0.804489	2.107580e-49	1.088069e-46
MsG0280011401.01	MsG0480023261.01	0.801155	1.028747e-48	4.878154e-46
MsG0280011401.01	MsG0480023381.01	0.824650	7.195551e-54	6.413252e-51
MsG0280011401.01	MsG0480023384.01	0.810166	1.319538e-50	7.897259e-48
MsG0280011401.01	MsG0480023565.01	0.818899	1.540427e-52	1.167924e-49
MsG0280011401.01	MsG0480023578.01	0.823468	1.363151e-53	1.174667e-50
MsG0280011401.01	MsG0480023641.01	0.848168	7.277975e-60	1.323902e-56
MsG0280011401.01	MsG0480023877.01	0.803965	2.710182e-49	1.380528e-46
MsG0280011401.01	MsG0580024340.01	0.800876	1.173419e-48	5.524999e-46
MsG0280011401.01	MsG0580024717.01	0.868578	5.885924e-66	2.140033e-62
MsG0280011401.01	MsG0580024759.01	0.800522	1.385213e-48	6.463696e-46
MsG0280011401.01	MsG0580024775.01	0.829738	4.350801e-55	4.492752e-52
MsG0280011401.01	MsG0580024806.01	0.809069	2.270393e-50	1.319936e-47
MsG0280011401.01	MsG0580024829.01	0.865460	5.812327e-65	1.892523e-61
MsG0280011401.01	MsG0580024833.01	0.806637	7.466397e-50	4.073006e-47
MsG0280011401.01	MsG0580024862.01	0.818144	2.285247e-52	1.696745e-49
MsG0280011401.01	MsG0580024873.01	0.807065	6.062632e-50	3.344193e-47
MsG0280011401.01	MsG0580025625.01	0.882045	1.447554e-70	8.684217e-67
MsG0280011401.01	MsG0580025644.01	0.825257	5.173009e-54	4.691025e-51
MsG0280011401.01	MsG0580025906.01	0.822091	2.851707e-53	2.363231e-50
MsG0280011401.01	MsG0580026032.01	0.835299	1.819307e-56	2.215799e-53
MsG0280011401.01	MsG0580026067.01	0.825863	3.716257e-54	3.428863e-51
MsG0280011401.01	MsG0580026498.01	0.823237	1.542982e-53	1.321019e-50
MsG0280011401.01	MsG0580027394.01	0.813654	2.294556e-51	1.507267e-48
MsG0280011401.01	MsG0580027899.01	0.812170	4.851242e-51	3.062339e-48
MsG0280011401.01	MsG0580028024.01	0.856378	3.350779e-62	7.982003e-59
MsG0280011401.01	MsG0580028033.01	0.808802	2.589998e-50	1.494976e-47
MsG0280011401.01	MsG0580028179.01	0.803175	3.951831e-49	1.972544e-46
MsG0280011401.01	MsG0580028353.01	0.824977	6.023203e-54	5.418830e-51
MsG0280011401.01	MsG0580028925.01	0.844203	8.741922e-59	1.401059e-55
MsG0280011401.01	MsG0580029276.01	0.808932	2.428521e-50	1.406638e-47
MsG0280011401.01	MsG0580029414.01	0.850203	1.976287e-60	3.841402e-57
MsG0280011401.01	MsG0580029529.01	0.808343	3.244964e-50	1.850859e-47
MsG0280011401.01	MsG0580029734.01	0.823713	1.194565e-53	1.036750e-50
MsG0280011401.01	MsG0580029799.01	0.816698	4.836409e-52	3.451356e-49
MsG0280011401.01	MsG0580029879.01	0.807421	5.097062e-50	2.837757e-47
MsG0280011401.01	MsG0580029912.01	0.859242	4.734779e-63	1.242006e-59
MsG0280011401.01	MsG0580029914.01	0.800544	1.371265e-48	6.402158e-46
MsG0280011401.01	MsG0680030464.01	0.847978	8.211066e-60	1.484686e-56
MsG0280011401.01	MsG0680030514.01	0.818675	1.731762e-52	1.304791e-49
MsG0280011401.01	MsG0680030515.01	0.843688	1.201256e-58	1.894394e-55
MsG0280011401.01	MsG0680030680.01	0.848960	4.392274e-60	8.199122e-57
MsG0280011401.01	MsG0680030858.01	0.825051	5.786591e-54	5.216909e-51
MsG0280011401.01	MsG0680030905.01	0.801495	8.764251e-49	4.191603e-46
MsG0280011401.01	MsG0680030992.01	0.804717	1.888846e-49	9.809814e-47
MsG0280011401.01	MsG0680031377.01	-0.828515	8.615444e-55	8.582589e-52
MsG0280011401.01	MsG0680031469.01	0.803917	2.772295e-49	1.410506e-46
MsG0280011401.01	MsG0680031815.01	0.809146	2.185468e-50	1.273227e-47
MsG0280011401.01	MsG0680032006.01	0.831591	1.530499e-55	1.668591e-52
MsG0280011401.01	MsG0680032254.01	0.841128	5.734855e-58	8.344953e-55
MsG0280011401.01	MsG0680032413.01	0.823009	1.744568e-53	1.484111e-50
MsG0280011401.01	MsG0680032516.01	0.827070	1.916574e-54	1.830462e-51
MsG0280011401.01	MsG0680032827.01	0.830029	3.695294e-55	3.847440e-52
MsG0280011401.01	MsG0680032830.01	0.843621	1.252163e-58	1.970611e-55
MsG0280011401.01	MsG0680032954.01	0.828235	1.006083e-54	9.941217e-52
MsG0280011401.01	MsG0680033377.01	0.808539	2.947592e-50	1.689803e-47
MsG0280011401.01	MsG0680033465.01	0.829509	4.948443e-55	5.074893e-52
MsG0280011401.01	MsG0680034028.01	0.808652	2.788434e-50	1.603196e-47
MsG0280011401.01	MsG0680034235.01	0.856275	3.591620e-62	8.525455e-59
MsG0280011401.01	MsG0680034766.01	0.826578	2.511671e-54	2.364779e-51
MsG0280011401.01	MsG0680034767.01	0.842066	3.244759e-58	4.862346e-55
MsG0280011401.01	MsG0680035307.01	0.850468	1.664955e-60	3.264524e-57
MsG0280011401.01	MsG0680035308.01	0.803113	4.069482e-49	2.027956e-46
MsG0280011401.01	MsG0680035707.01	0.825137	5.522871e-54	4.991405e-51
MsG0280011401.01	MsG0680035731.01	0.806365	8.520797e-50	4.616193e-47
MsG0280011401.01	MsG0780036117.01	0.827272	1.714576e-54	1.647358e-51
MsG0280011401.01	MsG0780036263.01	0.872357	3.383414e-67	1.411682e-63
MsG0280011401.01	MsG0780036567.01	0.825321	4.996174e-54	4.539052e-51
MsG0280011401.01	MsG0780036800.01	0.819051	1.422956e-52	1.083348e-49
MsG0280011401.01	MsG0780036803.01	0.850003	2.248269e-60	4.341751e-57
MsG0280011401.01	MsG0780037105.01	0.804657	1.944528e-49	1.008280e-46
MsG0280011401.01	MsG0780037330.01	0.882101	1.381373e-70	8.305138e-67
MsG0280011401.01	MsG0780037399.01	0.856707	2.682386e-62	6.458211e-59
MsG0280011401.01	MsG0780037662.01	0.829414	5.218548e-55	5.337434e-52
MsG0280011401.01	MsG0780037701.01	0.871646	5.831738e-67	2.370420e-63
MsG0280011401.01	MsG0780037946.01	0.805887	1.074417e-49	5.750264e-47
MsG0280011401.01	MsG0780039336.01	0.800001	1.768762e-48	8.144865e-46
MsG0280011401.01	MsG0780039435.01	0.826685	2.369193e-54	2.237520e-51
MsG0280011401.01	MsG0780039438.01	0.820800	5.665318e-53	4.527914e-50
MsG0280011401.01	MsG0780039439.01	0.830606	2.670810e-55	2.827821e-52
MsG0280011401.01	MsG0780039806.01	0.808607	2.850312e-50	1.636867e-47
MsG0280011401.01	MsG0780039964.01	0.854022	1.623302e-61	3.576502e-58
MsG0280011401.01	MsG0780039975.01	0.830882	2.285911e-55	2.440128e-52
MsG0280011401.01	MsG0780039994.01	0.820886	5.411697e-53	4.335798e-50
MsG0280011401.01	MsG0780040278.01	0.827254	1.731982e-54	1.663183e-51
MsG0280011401.01	MsG0780040343.01	0.819902	9.101546e-53	7.095264e-50
MsG0280011401.01	MsG0780040559.01	-0.801997	6.914400e-49	3.349107e-46
MsG0280011401.01	MsG0780040700.01	0.820252	7.565987e-53	5.955856e-50
MsG0280011401.01	MsG0780040794.01	0.805924	1.055499e-49	5.654311e-47
MsG0280011401.01	MsG0780041004.01	0.833553	4.992819e-56	5.769826e-53
MsG0280011401.01	MsG0780041091.01	0.842391	2.661114e-58	4.029262e-55
MsG0280011401.01	MsG0780041159.01	0.814318	1.637690e-51	1.095343e-48
MsG0280011401.01	MsG0780041187.01	0.830618	2.653717e-55	2.810660e-52
MsG0280011401.01	MsG0780041191.01	0.806140	9.504544e-50	5.119850e-47
MsG0280011401.01	MsG0780041262.01	0.801122	1.044817e-48	4.950254e-46
MsG0280011401.01	MsG0780041301.01	0.834436	3.000809e-56	3.561062e-53
MsG0280011401.01	MsG0780041482.01	0.804146	2.485196e-49	1.271797e-46
MsG0280011401.01	MsG0780041729.01	-0.838181	3.350283e-57	4.451779e-54
MsG0280011401.01	MsG0780041734.01	-0.801162	1.025686e-48	4.864404e-46
MsG0280011401.01	MsG0780041747.01	0.822684	2.076104e-53	1.749981e-50
MsG0280011401.01	MsG0880041852.01	0.844367	7.900097e-59	1.272473e-55
MsG0280011401.01	MsG0880042000.01	0.821523	3.859415e-53	3.147190e-50
MsG0280011401.01	MsG0880042022.01	0.823837	1.117355e-53	9.730273e-51
MsG0280011401.01	MsG0880042086.01	0.811224	7.790836e-51	4.795440e-48
MsG0280011401.01	MsG0880042558.01	0.801969	7.006064e-49	3.390974e-46
MsG0280011401.01	MsG0880042560.01	0.814980	1.168449e-51	7.955628e-49
MsG0280011401.01	MsG0880042622.01	0.818736	1.677865e-52	1.266297e-49
MsG0280011401.01	MsG0880042689.01	0.826362	2.828446e-54	2.646880e-51
MsG0280011401.01	MsG0880042876.01	0.818107	2.329054e-52	1.727505e-49
MsG0280011401.01	MsG0880043014.01	0.833211	6.074189e-56	6.948204e-53
MsG0280011401.01	MsG0880043107.01	0.815198	1.045531e-51	7.160696e-49
MsG0280011401.01	MsG0880043250.01	0.828410	9.133459e-55	9.071113e-52
MsG0280011401.01	MsG0880043278.01	0.824481	7.884173e-54	6.992109e-51
MsG0280011401.01	MsG0880043648.01	0.803830	2.890878e-49	1.467461e-46
MsG0280011401.01	MsG0880044105.01	0.826376	2.806880e-54	2.627846e-51
MsG0280011401.01	MsG0880044487.01	0.812900	3.359251e-51	2.162010e-48
MsG0280011401.01	MsG0880044884.01	0.812516	4.076431e-51	2.597254e-48
MsG0280011401.01	MsG0880045044.01	0.809561	1.780654e-50	1.048911e-47
MsG0280011401.01	MsG0880045285.01	0.822365	2.462583e-53	2.057098e-50
MsG0280011401.01	MsG0880045387.01	0.819670	1.028207e-52	7.963734e-50
MsG0280011401.01	MsG0880045558.01	0.804139	2.493207e-49	1.275670e-46
MsG0280011401.01	MsG0880045617.01	0.804847	1.774687e-49	9.247892e-47
MsG0280011401.01	MsG0880045771.01	0.807244	5.557471e-50	3.079912e-47
MsG0280011401.01	MsG0880045783.01	0.812403	4.314328e-51	2.740749e-48
MsG0280011401.01	MsG0880045992.01	0.816985	4.169669e-52	2.999334e-49
MsG0280011401.01	MsG0880046533.01	0.809360	1.966478e-50	1.152248e-47
MsG0280011401.01	MsG0880046723.01	0.813679	2.265309e-51	1.489058e-48
MsG0280011401.01	MsG0880046736.01	0.800401	1.466157e-48	6.820561e-46
MsG0280011401.01	MsG0880046765.01	0.800707	1.270069e-48	5.954028e-46
MsG0280011401.01	MsG0880047046.01	0.845578	3.721820e-59	6.230183e-56
MsG0280011401.01	MsG0880047152.01	0.888132	7.741419e-73	5.921209e-69
MsG0280011401.01	MsG0880047267.01	0.817424	3.322399e-52	2.418693e-49
MsG0280011401.01	MsG0880047306.01	0.817092	3.944968e-52	2.845814e-49
MsG0280011401.01	MsG0880047394.01	0.839390	1.630445e-57	2.248452e-54
MsG0280011401.01	MsG0880047451.01	0.814413	1.560404e-51	1.046377e-48
MsG0280011401.01	MsG0880047519.01	0.828583	8.294127e-55	8.278838e-52
MsG0280011401.01	MsG0880047614.01	0.849864	2.459226e-60	4.727278e-57
MsG0280011401.01	MsG0880047696.01	0.831088	2.035477e-55	2.185990e-52
MsG0280006465.01	MsG0280011401.01	0.808752	2.653452e-50	1.529669e-47
MsG0280006634.01	MsG0280011401.01	0.825530	4.456975e-54	4.073082e-51
MsG0280006669.01	MsG0280011401.01	0.878189	3.434888e-69	1.776427e-65
MsG0280006753.01	MsG0280011401.01	-0.813206	2.878874e-51	1.868068e-48
MsG0280006914.01	MsG0280011401.01	0.806529	7.870106e-50	4.281601e-47
MsG0280007118.01	MsG0280011401.01	0.808956	2.400336e-50	1.391230e-47
MsG0280007575.01	MsG0280011401.01	0.820326	7.276996e-53	5.739770e-50
MsG0280007756.01	MsG0280011401.01	0.842628	2.303031e-58	3.512315e-55
MsG0280008098.01	MsG0280011401.01	0.842519	2.461011e-58	3.741062e-55
MsG0280008113.01	MsG0280011401.01	0.841738	3.960724e-58	5.873903e-55
MsG0280008419.01	MsG0280011401.01	0.824367	8.386940e-54	7.413502e-51
MsG0280008709.01	MsG0280011401.01	0.816820	4.540796e-52	3.251329e-49
MsG0280008738.01	MsG0280011401.01	0.838572	2.656140e-57	3.572190e-54
MsG0280008928.01	MsG0280011401.01	0.838825	2.284782e-57	3.096533e-54
MsG0280008929.01	MsG0280011401.01	0.861179	1.230513e-63	3.450758e-60
MsG0280008932.01	MsG0280011401.01	0.905362	4.651115e-80	7.494918e-76
MsG0280009256.01	MsG0280011401.01	0.834106	3.630750e-56	4.265951e-53
MsG0280009350.01	MsG0280011401.01	0.810863	9.328376e-51	5.687417e-48
MsG0280009435.01	MsG0280011401.01	0.816232	6.150610e-52	4.333696e-49
MsG0280009436.01	MsG0280011401.01	0.810340	1.209881e-50	7.274071e-48
MsG0280009507.01	MsG0280011401.01	0.851696	7.499327e-61	1.530541e-57
MsG0280009685.01	MsG0280011401.01	0.815472	9.085499e-52	6.270345e-49
MsG0280009691.01	MsG0280011401.01	0.819841	9.395355e-53	7.312065e-50
MsG0280009708.01	MsG0280011401.01	0.824705	6.982610e-54	6.233538e-51
MsG0280009756.01	MsG0280011401.01	0.824327	8.572038e-54	7.568299e-51
MsG0280009757.01	MsG0280011401.01	0.869278	3.489343e-66	1.301870e-62
MsG0280009953.01	MsG0280011401.01	0.804375	2.226985e-49	1.146381e-46
MsG0280010216.01	MsG0280011401.01	0.812859	3.429604e-51	2.204785e-48
MsG0280010257.01	MsG0280011401.01	0.833564	4.960490e-56	5.734161e-53
MsG0280010288.01	MsG0280011401.01	0.821328	4.281333e-53	3.472502e-50
MsG0280010517.01	MsG0280011401.01	0.809464	1.868278e-50	1.097660e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011401.01.T01	MTR_2g103750	79.268	164	5	1	1	164	1	135	2.66e-79	231
MsG0280011401.01.T01	MTR_4g010530	40.244	164	56	5	1	163	1	123	1.58e-23	90.1
MsG0280011401.01.T01	MTR_4g114600	33.714	175	71	8	1	162	1	143	6.16e-11	57.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011401.01.T01	AT1G52565	35.882	170	52	5	3	164	6	126	1.63e-13	64.3
MsG0280011401.01.T01	AT3G15760	32.778	180	57	8	1	164	1	132	5.45e-11	57.8

Find 23 sgRNAs with CRISPR-Local

Find 44 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACCCATCATTTCAAATTCT+TGG	0.191389	2:+83479099	MsG0280011401.01.T01:CDS
GAGCGCAAAATTTGTGTGTT+AGG	0.249902	2:-83479141	None:intergenic
TACAAAGCCATTCTATTTGC+AGG	0.298881	2:-83479720	None:intergenic
TTGCGCTCTTGTTTATATTC+AGG	0.300388	2:+83479156	MsG0280011401.01.T01:CDS
CTTCCAAGAATTTGAAATGA+TGG	0.348228	2:-83479102	None:intergenic
TGATGGGTTAATCTTGTGTT+TGG	0.357672	2:-83479085	None:intergenic
ATAGAATGGCTTTGTATAAC+GGG	0.410953	2:+83479727	MsG0280011401.01.T01:CDS
GTTGTTCTTGACAAAGTGTA+AGG	0.413473	2:-83479475	None:intergenic
AGCGCAAAATTTGTGTGTTA+GGG	0.441560	2:-83479140	None:intergenic
AATAGAATGGCTTTGTATAA+CGG	0.457196	2:+83479726	MsG0280011401.01.T01:CDS
TTCCAAGAATTTGAAATGAT+GGG	0.463098	2:-83479101	None:intergenic
TTGAGTTGACTTGACTAGAA+AGG	0.495722	2:-83478956	None:intergenic
AAAATACACACAATATAGTA+AGG	0.497693	2:-83479513	None:intergenic
ACAAATGACTTCTCTCTCAC+AGG	0.497730	2:+83479005	MsG0280011401.01.T01:exon
TAGATTTGAAGAAAGTGTGA+AGG	0.513088	2:+83479596	MsG0280011401.01.T01:CDS
ATAGTAAGGACTAAGAACTA+AGG	0.525231	2:-83479499	None:intergenic
TGGAATTCCTGCAAATAGAA+TGG	0.533064	2:+83479713	MsG0280011401.01.T01:CDS
TTTCTCAGAGGAAAAGAAGA+GGG	0.546313	2:+83479536	MsG0280011401.01.T01:CDS
GTTAATTAGATATATAGATG+TGG	0.561719	2:-83478926	None:intergenic
TTAATTAGATATATAGATGT+GGG	0.565743	2:-83478925	None:intergenic
CAAATGACTTCTCTCTCACA+GGG	0.592780	2:+83479006	MsG0280011401.01.T01:exon
AGATATATAGATGTGGGTGT+AGG	0.594837	2:-83478919	None:intergenic
AGTGAAACAACGAAAACTCG+TGG	0.634965	2:+83479693	MsG0280011401.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATCGATATTGATATTAATTA+AGG	-	Chr2:83479420-83479439	None:intergenic	15.0%
!!	TTAATTAGATATATAGATGT+GGG	-	Chr2:83478928-83478947	None:intergenic	15.0%
!!	AAAATACACACAATATAGTA+AGG	-	Chr2:83479516-83479535	None:intergenic	20.0%
!!	AATATCAATATCGATATTGT+CGG	+	Chr2:83479425-83479444	MsG0280011401.01.T01:intron	20.0%
!!	ATATCGATATTGATATTGTT+AGG	-	Chr2:83479325-83479344	None:intergenic	20.0%
!!	GTTAATTAGATATATAGATG+TGG	-	Chr2:83478929-83478948	None:intergenic	20.0%
!!	TCTACATACAAAATAAAGTA+AGG	-	Chr2:83479209-83479228	None:intergenic	20.0%
!!!	TTACTTTATTTTGTATGTAG+AGG	+	Chr2:83479208-83479227	MsG0280011401.01.T01:intron	20.0%
!!	TCATTTGTTGAAGAAAAAGA+AGG	-	Chr2:83478993-83479012	None:intergenic	25.0%
!!	TTCCAAGAATTTGAAATGAT+GGG	-	Chr2:83479104-83479123	None:intergenic	25.0%
!!!	AATAGAATGGCTTTGTATAA+CGG	+	Chr2:83479726-83479745	MsG0280011401.01.T01:CDS	25.0%
!!!	TTTTTTATGACCTAACTCAA+CGG	-	Chr2:83479366-83479385	None:intergenic	25.0%
	AACCCATCATTTCAAATTCT+TGG	+	Chr2:83479099-83479118	MsG0280011401.01.T01:CDS	30.0%
	ATAGTAAGGACTAAGAACTA+AGG	-	Chr2:83479502-83479521	None:intergenic	30.0%
	TAGCAAAAAAAGAGAAACAG+AGG	+	Chr2:83479640-83479659	MsG0280011401.01.T01:CDS	30.0%
!	CTTCCAAGAATTTGAAATGA+TGG	-	Chr2:83479105-83479124	None:intergenic	30.0%
!	TAGATTTGAAGAAAGTGTGA+AGG	+	Chr2:83479596-83479615	MsG0280011401.01.T01:CDS	30.0%
!!	ATAGAATGGCTTTGTATAAC+GGG	+	Chr2:83479727-83479746	MsG0280011401.01.T01:CDS	30.0%
!!	TTTGTATAACGGGATTTTGA+GGG	+	Chr2:83479737-83479756	MsG0280011401.01.T01:CDS	30.0%
!!!	TGTGTGTATTTTTTTCTCAG+AGG	+	Chr2:83479524-83479543	MsG0280011401.01.T01:CDS	30.0%
	AGCGCAAAATTTGTGTGTTA+GGG	-	Chr2:83479143-83479162	None:intergenic	35.0%
	AGGTTAATCAAAAGAAGAGC+TGG	-	Chr2:83479189-83479208	None:intergenic	35.0%
	GGAAAAAGCTAGATAAAGCA+TGG	-	Chr2:83479067-83479086	None:intergenic	35.0%
	GTTGTTCTTGACAAAGTGTA+AGG	-	Chr2:83479396-83479415	None:intergenic	35.0%
	TACAAAGCCATTCTATTTGC+AGG	-	Chr2:83479723-83479742	None:intergenic	35.0%
	TGGAATTCCTGCAAATAGAA+TGG	+	Chr2:83479713-83479732	MsG0280011401.01.T01:CDS	35.0%
	TTTCTCAGAGGAAAAGAAGA+GGG	+	Chr2:83479536-83479555	MsG0280011401.01.T01:CDS	35.0%
!	TTGCGCTCTTGTTTATATTC+AGG	+	Chr2:83479156-83479175	MsG0280011401.01.T01:CDS	35.0%
!	TTTTCTCAGAGGAAAAGAAG+AGG	+	Chr2:83479535-83479554	MsG0280011401.01.T01:CDS	35.0%
!!	CTTTGTATAACGGGATTTTG+AGG	+	Chr2:83479736-83479755	MsG0280011401.01.T01:CDS	35.0%
!!	TGATGGGTTAATCTTGTGTT+TGG	-	Chr2:83479088-83479107	None:intergenic	35.0%
!!	TTGAGTTGACTTGACTAGAA+AGG	-	Chr2:83478959-83478978	None:intergenic	35.0%
	ACAAATGACTTCTCTCTCAC+AGG	+	Chr2:83479005-83479024	MsG0280011401.01.T01:exon	40.0%
	AGTGAAACAACGAAAACTCG+TGG	+	Chr2:83479693-83479712	MsG0280011401.01.T01:CDS	40.0%
	CAAATGACTTCTCTCTCACA+GGG	+	Chr2:83479006-83479025	MsG0280011401.01.T01:exon	40.0%
	GAGCGCAAAATTTGTGTGTT+AGG	-	Chr2:83479144-83479163	None:intergenic	40.0%
	TACTGAAACTCACACGCATA+AGG	+	Chr2:83479242-83479261	MsG0280011401.01.T01:intron	40.0%
	TCGATATTGTCCGTTGAGTT+AGG	+	Chr2:83479353-83479372	MsG0280011401.01.T01:intron	40.0%
!	TCGATATTGTCGGTTAAGCT+AGG	+	Chr2:83479435-83479454	MsG0280011401.01.T01:intron	40.0%
	ACACACAACTGTGTGGTACA+GGG	+	Chr2:83479274-83479293	MsG0280011401.01.T01:intron	45.0%
!!	TTTTGAGGGATCGTGTGCAT+AGG	+	Chr2:83479751-83479770	MsG0280011401.01.T01:CDS	45.0%
	CACACACAACTGTGTGGTAC+AGG	+	Chr2:83479273-83479292	MsG0280011401.01.T01:intron	50.0%
	CGAACTCACACACAACTGTG+TGG	+	Chr2:83479267-83479286	MsG0280011401.01.T01:intron	50.0%
	TGTGGTACAGGGTTCGAACT+CGG	+	Chr2:83479285-83479304	MsG0280011401.01.T01:intron	50.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	83478922	83479782	83478922	ID=MsG0280011401.01;Name=MsG0280011401.01
Chr2	mRNA	83478922	83479782	83478922	ID=MsG0280011401.01.T01;Parent=MsG0280011401.01;Name=MsG0280011401.01.T01;_AED=0.50;_eAED=0.56;_QI=87\|0\|0.5\|1\|0\|0\|2\|0\|164
Chr2	exon	83478922	83479177	83478922	ID=MsG0280011401.01.T01:exon:12749;Parent=MsG0280011401.01.T01
Chr2	exon	83479457	83479782	83479457	ID=MsG0280011401.01.T01:exon:12750;Parent=MsG0280011401.01.T01
Chr2	five_prime_UTR	83478922	83479008	83478922	ID=MsG0280011401.01.T01:five_prime_utr;Parent=MsG0280011401.01.T01
Chr2	CDS	83479009	83479177	83479009	ID=MsG0280011401.01.T01:cds;Parent=MsG0280011401.01.T01
Chr2	CDS	83479457	83479782	83479457	ID=MsG0280011401.01.T01:cds;Parent=MsG0280011401.01.T01

Gene Sequence

>MsG0280011401.01.T01

ATGACTTCTCTCTCACAGGGTCTTGTTTTCACTACAGCTATGCTTGTATCAAGCACCATGCTTTATCTAGCTTTTTCCAAACACAAGATTAACCCATCATTTCAAATTCTTGGAAGTCACGTTTCTCATGACCCTAACACACAAATTTTGCGCTCTTGTTTATATTCAGGTCATATAAATTTTTTAACCTTACACTTTGTCAAGAACAACTCCTTAGTTCTTAGTCCTTACTATATTGTGTGTATTTTTTTCTCAGAGGAAAAGAAGAGGGAGAGAAAGATGAATACAAAGAAAAATAAAAAGAAAGTTAGATTTGAAGAAAGTGTGAAGGAAGTAAGAGAAAAGAGTGAGATAGCAAAAAAAGAGAAACAGAGGAAACGAAACAGAGTACATAGCAACTGCAGAAGTGAAACAACGAAAACTCGTGGAATTCCTGCAAATAGAATGGCTTTGTATAACGGGATTTTGAGGGATCGTGTGCATAGGATTGAGTGA

Protein sequence

>MsG0280011401.01.T01

MTSLSQGLVFTTAMLVSSTMLYLAFSKHKINPSFQILGSHVSHDPNTQILRSCLYSGHINFLTLHFVKNNSLVLSPYYIVCIFFSEEKKRERKMNTKKNKKKVRFEESVKEVREKSEIAKKEKQRKRNRVHSNCRSETTKTRGIPANRMALYNGILRDRVHRIE*