AlfalfaGEDB | MsG0580024773.01

M. sativa cultivar ZhongmuNo.1 / MsG0580024773.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024773.01.T01	XP_003611645.1	82.824	262	7	1	1	262	1	224	6.79E-122	357

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024773.01.T01	Q9FPR2	55.172	87	31	5	1	87	1	79	8.26E-11	63.2

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024773.01.T01	G7K3Y3	82.824	262	7	1	1	262	1	224	3.24e-122	357

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047815.01	MsG0580024773.01	0.809628	1.722293e-50	1.016427e-47
MsG0080048258.01	MsG0580024773.01	0.813726	2.212638e-51	1.456296e-48
MsG0180000535.01	MsG0580024773.01	0.828998	6.580022e-55	6.647319e-52
MsG0180001288.01	MsG0580024773.01	0.802112	6.548793e-49	3.181278e-46
MsG0180001293.01	MsG0580024773.01	0.827192	1.792055e-54	1.717755e-51
MsG0180001588.01	MsG0580024773.01	0.834505	2.883039e-56	3.428510e-53
MsG0180001719.01	MsG0580024773.01	0.807511	4.878664e-50	2.722542e-47
MsG0180002984.01	MsG0580024773.01	0.801369	9.302663e-49	4.435002e-46
MsG0180003857.01	MsG0580024773.01	0.826716	2.329257e-54	2.201703e-51
MsG0180003905.01	MsG0580024773.01	0.829929	3.909998e-55	4.059438e-52
MsG0180004120.01	MsG0580024773.01	0.832005	1.209882e-55	1.335208e-52
MsG0180004185.01	MsG0580024773.01	0.836876	7.237268e-57	9.241661e-54
MsG0180004583.01	MsG0580024773.01	0.835025	2.132769e-56	2.575841e-53
MsG0180004804.01	MsG0580024773.01	0.809566	1.775847e-50	1.046246e-47
MsG0180004828.01	MsG0580024773.01	0.841191	5.517774e-58	8.044932e-55
MsG0180005325.01	MsG0580024773.01	0.820201	7.772393e-53	6.109775e-50
MsG0180005367.01	MsG0580024773.01	0.821510	3.886390e-53	3.167975e-50
MsG0180005553.01	MsG0580024773.01	0.816695	4.843769e-52	3.456311e-49
MsG0180005655.01	MsG0580024773.01	0.853541	2.232167e-61	4.839701e-58
MsG0180006183.01	MsG0580024773.01	0.864012	1.651410e-64	5.107682e-61
MsG0280010617.01	MsG0580024773.01	0.811050	8.496219e-51	5.205887e-48
MsG0380011846.01	MsG0580024773.01	0.866865	2.085090e-65	7.134776e-62
MsG0380012118.01	MsG0580024773.01	0.863417	2.526371e-64	7.652602e-61
MsG0380012818.01	MsG0580024773.01	0.836779	7.659176e-57	9.752117e-54
MsG0380014542.01	MsG0580024773.01	0.858590	7.421079e-63	1.903578e-59
MsG0380014544.01	MsG0580024773.01	0.887470	1.387308e-72	1.033013e-68
MsG0480018767.01	MsG0580024773.01	0.834723	2.541913e-56	3.041843e-53
MsG0480020398.01	MsG0580024773.01	0.810031	1.410993e-50	8.415423e-48
MsG0480021100.01	MsG0580024773.01	0.819784	9.683220e-53	7.524179e-50
MsG0480021456.01	MsG0580024773.01	0.813361	2.661053e-51	1.734235e-48
MsG0480021486.01	MsG0580024773.01	0.832980	6.936202e-56	7.879468e-53
MsG0480021740.01	MsG0580024773.01	0.838536	2.712451e-57	3.643877e-54
MsG0480021773.01	MsG0580024773.01	0.833773	4.398919e-56	5.117119e-53
MsG0480021902.01	MsG0580024773.01	0.806099	9.695676e-50	5.217256e-47
MsG0480022682.01	MsG0580024773.01	0.859203	4.866010e-63	1.274822e-59
MsG0480023064.01	MsG0580024773.01	0.815574	8.622409e-52	5.966960e-49
MsG0480023426.01	MsG0580024773.01	0.808668	2.765492e-50	1.590718e-47
MsG0480023626.01	MsG0580024773.01	0.801404	9.150420e-49	4.366058e-46
MsG0480023706.01	MsG0580024773.01	0.801516	8.678765e-49	4.152871e-46
MsG0480023861.01	MsG0580024773.01	0.842143	3.095457e-58	4.649920e-55
MsG0480024019.01	MsG0580024773.01	0.827672	1.374622e-54	1.336064e-51
MsG0580024773.01	MsG0580025056.01	0.812429	4.258586e-51	2.707208e-48
MsG0580024773.01	MsG0580025970.01	0.832190	1.088881e-55	1.208095e-52
MsG0580024773.01	MsG0580027854.01	0.838962	2.104793e-57	2.864485e-54
MsG0580024773.01	MsG0580028364.01	0.853998	1.649287e-61	3.630635e-58
MsG0580024773.01	MsG0580030141.01	0.875238	3.606311e-68	1.671862e-64
MsG0580024773.01	MsG0680031006.01	0.800243	1.579491e-48	7.318053e-46
MsG0580024773.01	MsG0680035905.01	0.817269	3.600279e-52	2.609662e-49
MsG0580024773.01	MsG0780038393.01	0.821733	3.451614e-53	2.831396e-50
MsG0580024773.01	MsG0780038647.01	0.831464	1.644596e-55	1.786100e-52
MsG0580024773.01	MsG0780040830.01	0.823698	1.204253e-53	1.044725e-50
MsG0580024773.01	MsG0780040899.01	0.817457	3.265647e-52	2.379552e-49
MsG0580024773.01	MsG0780040978.01	0.835281	1.838409e-56	2.237726e-53
MsG0580024773.01	MsG0780040990.01	0.817908	2.582908e-52	1.905366e-49
MsG0580024773.01	MsG0780041336.01	0.823090	1.670112e-53	1.424047e-50
MsG0580024773.01	MsG0880042392.01	0.833328	5.680794e-56	6.521179e-53
MsG0580024773.01	MsG0880043684.01	0.905443	4.269184e-80	6.906476e-76
MsG0580024773.01	MsG0880043714.01	0.871380	7.142265e-67	2.875089e-63
MsG0580024773.01	MsG0880044139.01	0.828959	6.724880e-55	6.786095e-52
MsG0580024773.01	MsG0880044437.01	0.818774	1.644230e-52	1.242293e-49
MsG0580024773.01	MsG0880045356.01	0.815239	1.023595e-51	7.018318e-49
MsG0580024773.01	MsG0880045439.01	0.833842	4.227369e-56	4.928246e-53
MsG0580024773.01	MsG0880045584.01	0.822810	1.941145e-53	1.642034e-50
MsG0580024773.01	MsG0880045612.01	0.813978	1.946751e-51	1.290001e-48
MsG0580024773.01	MsG0880045647.01	0.844735	6.287709e-59	1.024708e-55
MsG0580024773.01	MsG0880045802.01	0.819794	9.631289e-53	7.486146e-50
MsG0580024773.01	MsG0880045879.01	0.831870	1.306563e-55	1.436274e-52
MsG0580024773.01	MsG0880045963.01	0.805836	1.101393e-49	5.886940e-47
MsG0580024773.01	MsG0880046904.01	0.806264	8.951310e-50	4.837192e-47
MsG0580024773.01	MsG0880046992.01	0.809605	1.742089e-50	1.027448e-47
MsG0580024773.01	MsG0880047414.01	0.842934	1.908726e-58	2.938915e-55
MsG0580024773.01	MsG0880047649.01	0.822787	1.965111e-53	1.661237e-50
MsG0380015656.01	MsG0580024773.01	0.864508	1.156519e-64	3.639684e-61
MsG0380015954.01	MsG0580024773.01	0.836204	1.073265e-56	1.343332e-53
MsG0380016143.01	MsG0580024773.01	0.816524	5.289468e-52	3.756815e-49
MsG0380016819.01	MsG0580024773.01	0.838305	3.112848e-57	4.151983e-54
MsG0380017079.01	MsG0580024773.01	0.840815	6.927201e-58	9.983806e-55
MsG0380017588.01	MsG0580024773.01	0.807426	5.085532e-50	2.831677e-47
MsG0380017696.01	MsG0580024773.01	0.835127	2.010569e-56	2.435562e-53
MsG0380017841.01	MsG0580024773.01	0.805275	1.443854e-49	7.606602e-47
MsG0380017913.01	MsG0580024773.01	0.861237	1.181545e-63	3.320244e-60
MsG0380018055.01	MsG0580024773.01	0.854402	1.261105e-61	2.812849e-58
MsG0480018111.01	MsG0580024773.01	0.847424	1.166437e-59	2.072425e-56
MsG0480018228.01	MsG0580024773.01	0.838661	2.518926e-57	3.396914e-54
MsG0480018362.01	MsG0580024773.01	0.835034	2.121894e-56	2.563353e-53
MsG0280006851.01	MsG0580024773.01	0.803978	2.692548e-49	1.372060e-46
MsG0280007408.01	MsG0580024773.01	0.856466	3.156844e-62	7.542356e-59
MsG0280007695.01	MsG0580024773.01	0.848729	5.090380e-60	9.431251e-57
MsG0280009866.01	MsG0580024773.01	0.831535	1.579652e-55	1.719304e-52
MsG0280010248.01	MsG0580024773.01	0.804375	2.226625e-49	1.146206e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024773.01.T01	MTR_5g016250	82.824	262	7	1	1	262	1	224	8.23e-126	357
MsG0580024773.01.T01	MTR_4g095280	50.746	268	65	9	1	262	1	207	1.06e-24	98.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024773.01.T01	AT4G37450	55.172	87	31	5	1	87	1	79	8.43e-12	63.2
MsG0580024773.01.T01	AT4G37450	55.172	87	31	5	1	87	70	148	9.57e-12	64.3

Find 82 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCGACTGGAGCGGGTGATTT+TGG	0.166157	5:-9519117	None:intergenic
GTCTTCTTCTTTGATTTGCT+TGG	0.233907	5:-9519411	None:intergenic
GAAGCTGGTGGTGATGATTT+TGG	0.268418	5:-9519144	None:intergenic
GAACTCACTGGAGCTGGTTT+TGG	0.271780	5:-9519276	None:intergenic
TTTGTTTCTCATATTGCTAT+TGG	0.315427	5:-9520191	None:intergenic
GTCTCCTGCTGCTCCAGTTC+CGG	0.361020	5:+9519200	MsG0580024773.01.T01:CDS
TTCTCCACCAACACCAGTTC+CGG	0.397918	5:+9519323	MsG0580024773.01.T01:CDS
GGAGCACCAACCGGTGGTGC+TGG	0.405071	5:-9519489	None:intergenic
AGGATCATTGGCATTGGGCT+TGG	0.407424	5:+9520294	MsG0580024773.01.T01:CDS
GGAGATTTAGCTACCGGAAC+TGG	0.415929	5:-9519213	None:intergenic
GCACCACCGGTTGGTGCTCC+CGG	0.426318	5:+9519492	MsG0580024773.01.T01:CDS
ACCTCGTCGGCAGCAGATGC+TGG	0.438564	5:-9519543	None:intergenic
AGAAGCATCGAGACTAGGTC+CGG	0.440004	5:-9519511	None:intergenic
AGATGCTTGCAGAAGGTGAT+AGG	0.443222	5:+9520274	MsG0580024773.01.T01:CDS
GCAGCGGGAACCTCAGCGCT+TGG	0.454674	5:-9519384	None:intergenic
TGCATTGTCTTCGCCGGCGT+CGG	0.454807	5:+9519009	MsG0580024773.01.T01:CDS
GTCGGCAGCAGATGCTGGAC+CGG	0.462175	5:-9519538	None:intergenic
GGTGGTGAACTCACTGGAGC+TGG	0.464457	5:-9519282	None:intergenic
GCAGAAGGTGATAGGATCAT+TGG	0.465728	5:+9520282	MsG0580024773.01.T01:CDS
GAACTCACTGGAGCAACGAC+TGG	0.467649	5:-9519249	None:intergenic
GGAGCAGCAGGAGACACTGC+TGG	0.470597	5:-9519192	None:intergenic
TTTGGAGAAGCGACTGGAGC+GGG	0.473110	5:-9519126	None:intergenic
GTGATAGGATCATTGGCATT+GGG	0.477784	5:+9520289	MsG0580024773.01.T01:CDS
GAGCAGCAGGAGACACTGCT+GGG	0.486076	5:-9519191	None:intergenic
AGTCTCGATGCTTCTTCTCC+CGG	0.489491	5:+9519519	MsG0580024773.01.T01:CDS
GATTTGCTTGGAGCTGCAGC+GGG	0.492008	5:-9519399	None:intergenic
CTAGGTCCGGGAGCACCAAC+CGG	0.498357	5:-9519498	None:intergenic
TGGTTTGGTAGGTGCTGCGA+CGG	0.499899	5:-9519097	None:intergenic
GGTGGTGAACTCACCGGAAC+TGG	0.501787	5:-9519336	None:intergenic
GGTCCTTCCAATGCCGGTGA+AGG	0.503137	5:-9519465	None:intergenic
TCCAATGCCGGTGAAGGTGC+TGG	0.505092	5:-9519459	None:intergenic
GAACTCACTGGAACTGATGC+TGG	0.506311	5:-9519303	None:intergenic
TCAAAGAAGAAGACAAAGAA+AGG	0.506653	5:+9519420	MsG0580024773.01.T01:CDS
CAGTGCACCAGCACCTTCAC+CGG	0.520558	5:+9519452	MsG0580024773.01.T01:CDS
TGATTTGCTTGGAGCTGCAG+CGG	0.520904	5:-9519400	None:intergenic
GGTGATAGGATCATTGGCAT+TGG	0.523095	5:+9520288	MsG0580024773.01.T01:CDS
GCTACCGGAACTGGAGCAGC+AGG	0.527181	5:-9519204	None:intergenic
TCGGCAGCAGATGCTGGACC+GGG	0.527515	5:-9519537	None:intergenic
TTGATCTGCATTGTCTTCGC+CGG	0.528358	5:+9519003	MsG0580024773.01.T01:CDS
GCACCTTCACCGGCATTGGA+AGG	0.540204	5:+9519462	MsG0580024773.01.T01:CDS
ACCAGCACCTTCACCGGCAT+TGG	0.543518	5:+9519458	MsG0580024773.01.T01:CDS
GGTTTGGTAGGTGCTGCGAC+GGG	0.545682	5:-9519096	None:intergenic
ACGACTGGAGGAGATGCAGC+TGG	0.548388	5:-9519234	None:intergenic
CGGAGATTGACCTCCGACGC+CGG	0.551319	5:-9519022	None:intergenic
GCTGGAGGTCCTTCCAATGC+CGG	0.555710	5:-9519471	None:intergenic
TCAGCGCTTGGTGTTACTGC+AGG	0.556013	5:-9519372	None:intergenic
GGAAGGACCTCCAGCACCAC+CGG	0.557771	5:+9519479	MsG0580024773.01.T01:CDS
CTCACCGGAACTGGTGTTGG+TGG	0.560769	5:-9519327	None:intergenic
GCACCAACCGGTGGTGCTGG+AGG	0.563991	5:-9519486	None:intergenic
ATTGTCTTCGCCGGCGTCGG+AGG	0.568773	5:+9519012	MsG0580024773.01.T01:CDS
GCAGCTGGAGATTTAGCTAC+CGG	0.570958	5:-9519219	None:intergenic
GATGCTGGTGGTGAACTCAC+TGG	0.571235	5:-9519288	None:intergenic
AGGTGCTGCGACGGGAGCAA+CGG	0.574141	5:-9519088	None:intergenic
GCTGCGACGGGAGCAACGGA+TGG	0.574941	5:-9519084	None:intergenic
GGTGTTGGTGGAGAACTCAC+TGG	0.580691	5:-9519315	None:intergenic
AACAATCAGATGCTTGCAGA+AGG	0.582391	5:+9520267	MsG0580024773.01.T01:CDS
ACGGTAGGTGGTGATGTAGT+CGG	0.583529	5:-9519054	None:intergenic
GCAACGGTGGGAGATGAAGC+TGG	0.585303	5:-9519159	None:intergenic
GGACCTCCAGCACCACCGGT+TGG	0.589410	5:+9519483	MsG0580024773.01.T01:CDS
TGCTGGGGTTACAGTTGCAA+CGG	0.591349	5:-9519175	None:intergenic
GGAGAAGAAGCATCGAGACT+AGG	0.591692	5:-9519516	None:intergenic
CTCACTGGAGCAACGACTGG+AGG	0.594054	5:-9519246	None:intergenic
GAAGCATCGAGACTAGGTCC+GGG	0.596234	5:-9519510	None:intergenic
GAACTCACCGGAACTGGTGT+TGG	0.602828	5:-9519330	None:intergenic
GACGGGAGCAACGGATGGAG+TGG	0.607445	5:-9519079	None:intergenic
TCCAGCATCTGCTGCCGACG+AGG	0.615044	5:+9519542	MsG0580024773.01.T01:CDS
GATGGAGTGGTGACGGTAGG+TGG	0.616439	5:-9519066	None:intergenic
GGGGTTACAGTTGCAACGGT+GGG	0.618017	5:-9519171	None:intergenic
TGGGGTTACAGTTGCAACGG+TGG	0.619769	5:-9519172	None:intergenic
ACTGTCGGTGGTGAACTCAC+CGG	0.632362	5:-9519342	None:intergenic
GGTCCGGGAGCACCAACCGG+TGG	0.634066	5:-9519495	None:intergenic
ACGGATGGAGTGGTGACGGT+AGG	0.637861	5:-9519069	None:intergenic
AGCAACGGATGGAGTGGTGA+CGG	0.638689	5:-9519073	None:intergenic
GAGACATGAATGTACCTCGT+CGG	0.664516	5:-9519556	None:intergenic
GATGTAGTCGGAGCTGACGA+CGG	0.670627	5:-9519042	None:intergenic
TGCAGTAACACCAAGCGCTG+AGG	0.675143	5:+9519374	MsG0580024773.01.T01:CDS
ACTGCAGGTGTGGAAACTGT+CGG	0.683265	5:-9519357	None:intergenic
GCTTGGTGTTACTGCAGGTG+TGG	0.691588	5:-9519367	None:intergenic
CTCACTGGAACTGATGCTGG+TGG	0.701723	5:-9519300	None:intergenic
AGCAGCAGGAGACACTGCTG+GGG	0.718039	5:-9519190	None:intergenic
GCAGGTGTGGAAACTGTCGG+TGG	0.797392	5:-9519354	None:intergenic
ACGGTGGGAGATGAAGCTGG+TGG	0.830927	5:-9519156	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATAAAATAAAAACGCAAAG+AGG	-	Chr5:9519581-9519600	None:intergenic	20.0%
!!!	GAAAGAAATGTATAATGTTT+TGG	+	Chr5:9520155-9520174	MsG0580024773.01.T01:intron	20.0%
!	TTACTAGATATTGTTCTTGT+AGG	-	Chr5:9520088-9520107	None:intergenic	25.0%
!!	ATTGTAAATATTTTCACCGT+TGG	+	Chr5:9519659-9519678	MsG0580024773.01.T01:intron	25.0%
!!	TTTGTTTCTCATATTGCTAT+TGG	-	Chr5:9520194-9520213	None:intergenic	25.0%
!!!	AATGTATAATGTTTTGGTCA+TGG	+	Chr5:9520161-9520180	MsG0580024773.01.T01:intron	25.0%
!!!	TTTTTTACACATTCATGCAT+AGG	+	Chr5:9519892-9519911	MsG0580024773.01.T01:intron	25.0%
	ATATTGTTCTTGTAGGCATT+TGG	-	Chr5:9520081-9520100	None:intergenic	30.0%
	CGAGAACAATTAGTCAAATT+AGG	+	Chr5:9519929-9519948	MsG0580024773.01.T01:intron	30.0%
	TCAAAGAAGAAGACAAAGAA+AGG	+	Chr5:9519420-9519439	MsG0580024773.01.T01:CDS	30.0%
	TTAACTGCAATAACCCAATT+TGG	+	Chr5:9520045-9520064	MsG0580024773.01.T01:intron	30.0%
	TTGCAGTTAAATTTGCATTC+AGG	-	Chr5:9520035-9520054	None:intergenic	30.0%
	TTTGTGCATGTTTGATATCA+CGG	+	Chr5:9519600-9519619	MsG0580024773.01.T01:intron	30.0%
!	CTGATGCAAAATTTTACCAA+CGG	-	Chr5:9519678-9519697	None:intergenic	30.0%
!	GAATTTTCTGTATTACAGAG+TGG	+	Chr5:9520238-9520257	MsG0580024773.01.T01:CDS	30.0%
!	GTAAAATTTTGCATCAGATC+TGG	+	Chr5:9519681-9519700	MsG0580024773.01.T01:intron	30.0%
	TGGACTTCCAAAACCAAATT+GGG	-	Chr5:9520061-9520080	None:intergenic	35.0%
	TTGGACTTCCAAAACCAAAT+TGG	-	Chr5:9520062-9520081	None:intergenic	35.0%
!	GCACATTTTTGCTTCAATGT+AGG	+	Chr5:9519817-9519836	MsG0580024773.01.T01:intron	35.0%
!	TTTCCTGTCTCTCTCAATTT+TGG	-	Chr5:9519793-9519812	None:intergenic	35.0%
!!	GCAATAACCCAATTTGGTTT+TGG	+	Chr5:9520051-9520070	MsG0580024773.01.T01:intron	35.0%
!!	GTCTTCTTCTTTGATTTGCT+TGG	-	Chr5:9519414-9519433	None:intergenic	35.0%
	AACAATCAGATGCTTGCAGA+AGG	+	Chr5:9520267-9520286	MsG0580024773.01.T01:CDS	40.0%
	GTGATAGGATCATTGGCATT+GGG	+	Chr5:9520289-9520308	MsG0580024773.01.T01:CDS	40.0%
	TAGCCAAAATTGAGAGAGAC+AGG	+	Chr5:9519787-9519806	MsG0580024773.01.T01:intron	40.0%
	AGATGCTTGCAGAAGGTGAT+AGG	+	Chr5:9520274-9520293	MsG0580024773.01.T01:CDS	45.0%
	GAGACATGAATGTACCTCGT+CGG	-	Chr5:9519559-9519578	None:intergenic	45.0%
	GCAGAAGGTGATAGGATCAT+TGG	+	Chr5:9520282-9520301	MsG0580024773.01.T01:CDS	45.0%
	GGTGATAGGATCATTGGCAT+TGG	+	Chr5:9520288-9520307	MsG0580024773.01.T01:CDS	45.0%
	TTGATCTGCATTGTCTTCGC+CGG	+	Chr5:9519003-9519022	MsG0580024773.01.T01:CDS	45.0%
!!	GAAGCTGGTGGTGATGATTT+TGG	-	Chr5:9519147-9519166	None:intergenic	45.0%
!!	GATGATTTTGGAGAAGCGAC+TGG	-	Chr5:9519135-9519154	None:intergenic	45.0%
!!	GTATTTAATTAAAATTTAAA+CGG	+	Chr5:9519980-9519999	MsG0580024773.01.T01:intron	5.0%
	ACTGCAGGTGTGGAAACTGT+CGG	-	Chr5:9519360-9519379	None:intergenic	50.0%
	AGTCTCGATGCTTCTTCTCC+CGG	+	Chr5:9519519-9519538	MsG0580024773.01.T01:CDS	50.0%
	GAACTCACTGGAACTGATGC+TGG	-	Chr5:9519306-9519325	None:intergenic	50.0%
	GCAGCTGGAGATTTAGCTAC+CGG	-	Chr5:9519222-9519241	None:intergenic	50.0%
	GGAGATTTAGCTACCGGAAC+TGG	-	Chr5:9519216-9519235	None:intergenic	50.0%
	TGCTGGGGTTACAGTTGCAA+CGG	-	Chr5:9519178-9519197	None:intergenic	50.0%
	TTCTCCACCAACACCAGTTC+CGG	+	Chr5:9519323-9519342	MsG0580024773.01.T01:CDS	50.0%
!	ACGGTAGGTGGTGATGTAGT+CGG	-	Chr5:9519057-9519076	None:intergenic	50.0%
!	AGGATCATTGGCATTGGGCT+TGG	+	Chr5:9520294-9520313	MsG0580024773.01.T01:CDS	50.0%
!!	AGAAGCATCGAGACTAGGTC+CGG	-	Chr5:9519514-9519533	None:intergenic	50.0%
!!	GAACTCACTGGAGCTGGTTT+TGG	-	Chr5:9519279-9519298	None:intergenic	50.0%
!!	GGAGAAGAAGCATCGAGACT+AGG	-	Chr5:9519519-9519538	None:intergenic	50.0%
!!	TGATTTGCTTGGAGCTGCAG+CGG	-	Chr5:9519403-9519422	None:intergenic	50.0%
!!	TTTTGGAGAAGCGACTGGAG+CGG	-	Chr5:9519130-9519149	None:intergenic	50.0%
!!!	GCGGGTGATTTTGGTTTGGT+AGG	-	Chr5:9519111-9519130	None:intergenic	50.0%
!!!	GGTTTTGGTGGTGAACTCAC+TGG	-	Chr5:9519264-9519283	None:intergenic	50.0%
!!!	TGGAGCGGGTGATTTTGGTT+TGG	-	Chr5:9519115-9519134	None:intergenic	50.0%
	ACTGTCGGTGGTGAACTCAC+CGG	-	Chr5:9519345-9519364	None:intergenic	55.0%
	AGCAACGGATGGAGTGGTGA+CGG	-	Chr5:9519076-9519095	None:intergenic	55.0%
	CTCACTGGAACTGATGCTGG+TGG	-	Chr5:9519303-9519322	None:intergenic	55.0%
	GAACTCACCGGAACTGGTGT+TGG	-	Chr5:9519333-9519352	None:intergenic	55.0%
	GAACTCACTGGAGCAACGAC+TGG	-	Chr5:9519252-9519271	None:intergenic	55.0%
	GATGTAGTCGGAGCTGACGA+CGG	-	Chr5:9519045-9519064	None:intergenic	55.0%
	GGGGTTACAGTTGCAACGGT+GGG	-	Chr5:9519174-9519193	None:intergenic	55.0%
	TGGGGTTACAGTTGCAACGG+TGG	-	Chr5:9519175-9519194	None:intergenic	55.0%
	TTTGGAGAAGCGACTGGAGC+GGG	-	Chr5:9519129-9519148	None:intergenic	55.0%
!	GATGCTGGTGGTGAACTCAC+TGG	-	Chr5:9519291-9519310	None:intergenic	55.0%
!	GATTTGCTTGGAGCTGCAGC+GGG	-	Chr5:9519402-9519421	None:intergenic	55.0%
!	TGCAGTAACACCAAGCGCTG+AGG	+	Chr5:9519374-9519393	MsG0580024773.01.T01:CDS	55.0%
!!	GAAGCATCGAGACTAGGTCC+GGG	-	Chr5:9519513-9519532	None:intergenic	55.0%
!!	GCTTGGTGTTACTGCAGGTG+TGG	-	Chr5:9519370-9519389	None:intergenic	55.0%
!!	GGTGTTGGTGGAGAACTCAC+TGG	-	Chr5:9519318-9519337	None:intergenic	55.0%
!!	TCAGCGCTTGGTGTTACTGC+AGG	-	Chr5:9519375-9519394	None:intergenic	55.0%
!!	TGGTTTGGTAGGTGCTGCGA+CGG	-	Chr5:9519100-9519119	None:intergenic	55.0%
!!!	CTCACTGGAGCTGGTTTTGG+TGG	-	Chr5:9519276-9519295	None:intergenic	55.0%
	ACCAGCACCTTCACCGGCAT+TGG	+	Chr5:9519458-9519477	MsG0580024773.01.T01:CDS	60.0%
	ACGACTGGAGGAGATGCAGC+TGG	-	Chr5:9519237-9519256	None:intergenic	60.0%
	ACGGTGGGAGATGAAGCTGG+TGG	-	Chr5:9519159-9519178	None:intergenic	60.0%
	AGCAGCAGGAGACACTGCTG+GGG	-	Chr5:9519193-9519212	None:intergenic	60.0%
	CAGTGCACCAGCACCTTCAC+CGG	+	Chr5:9519452-9519471	MsG0580024773.01.T01:CDS	60.0%
	CTCACTGGAGCAACGACTGG+AGG	-	Chr5:9519249-9519268	None:intergenic	60.0%
	GAGCAGCAGGAGACACTGCT+GGG	-	Chr5:9519194-9519213	None:intergenic	60.0%
	GCAACGGTGGGAGATGAAGC+TGG	-	Chr5:9519162-9519181	None:intergenic	60.0%
	GCAGGTGTGGAAACTGTCGG+TGG	-	Chr5:9519357-9519376	None:intergenic	60.0%
	GCTGGAGGTCCTTCCAATGC+CGG	-	Chr5:9519474-9519493	None:intergenic	60.0%
	GGTCCTTCCAATGCCGGTGA+AGG	-	Chr5:9519468-9519487	None:intergenic	60.0%
	GGTGGTGAACTCACCGGAAC+TGG	-	Chr5:9519339-9519358	None:intergenic	60.0%
	GGTGGTGAACTCACTGGAGC+TGG	-	Chr5:9519258-9519277	None:intergenic	60.0%
	GTCTCCTGCTGCTCCAGTTC+CGG	+	Chr5:9519200-9519219	MsG0580024773.01.T01:CDS	60.0%
	TGCATTGTCTTCGCCGGCGT+CGG	+	Chr5:9519009-9519028	MsG0580024773.01.T01:CDS	60.0%
!	CTCACCGGAACTGGTGTTGG+TGG	-	Chr5:9519330-9519349	None:intergenic	60.0%
!	GCACCTTCACCGGCATTGGA+AGG	+	Chr5:9519462-9519481	MsG0580024773.01.T01:CDS	60.0%
!	GCGACTGGAGCGGGTGATTT+TGG	-	Chr5:9519120-9519139	None:intergenic	60.0%
!	GGTTTGGTAGGTGCTGCGAC+GGG	-	Chr5:9519099-9519118	None:intergenic	60.0%
!	TCCAATGCCGGTGAAGGTGC+TGG	-	Chr5:9519462-9519481	None:intergenic	60.0%
!!	ACGGATGGAGTGGTGACGGT+AGG	-	Chr5:9519072-9519091	None:intergenic	60.0%
!!	GATGGAGTGGTGACGGTAGG+TGG	-	Chr5:9519069-9519088	None:intergenic	60.0%
	ACCTCGTCGGCAGCAGATGC+TGG	-	Chr5:9519546-9519565	None:intergenic	65.0%
	CGGAGATTGACCTCCGACGC+CGG	-	Chr5:9519025-9519044	None:intergenic	65.0%
	GACGGGAGCAACGGATGGAG+TGG	-	Chr5:9519082-9519101	None:intergenic	65.0%
	GCTACCGGAACTGGAGCAGC+AGG	-	Chr5:9519207-9519226	None:intergenic	65.0%
	GGAAGGACCTCCAGCACCAC+CGG	+	Chr5:9519479-9519498	MsG0580024773.01.T01:CDS	65.0%
	GGAGCAGCAGGAGACACTGC+TGG	-	Chr5:9519195-9519214	None:intergenic	65.0%
	GTCGGCAGCAGATGCTGGAC+CGG	-	Chr5:9519541-9519560	None:intergenic	65.0%
	TCCAGCATCTGCTGCCGACG+AGG	+	Chr5:9519542-9519561	MsG0580024773.01.T01:CDS	65.0%
	TCGGCAGCAGATGCTGGACC+GGG	-	Chr5:9519540-9519559	None:intergenic	65.0%
!	AGGTGCTGCGACGGGAGCAA+CGG	-	Chr5:9519091-9519110	None:intergenic	65.0%
!	ATTGTCTTCGCCGGCGTCGG+AGG	+	Chr5:9519012-9519031	MsG0580024773.01.T01:CDS	65.0%
!!	CTAGGTCCGGGAGCACCAAC+CGG	-	Chr5:9519501-9519520	None:intergenic	65.0%
	GCAGCGGGAACCTCAGCGCT+TGG	-	Chr5:9519387-9519406	None:intergenic	70.0%
	GCTGCGACGGGAGCAACGGA+TGG	-	Chr5:9519087-9519106	None:intergenic	70.0%
	GGACCTCCAGCACCACCGGT+TGG	+	Chr5:9519483-9519502	MsG0580024773.01.T01:CDS	70.0%
!	GCACCAACCGGTGGTGCTGG+AGG	-	Chr5:9519489-9519508	None:intergenic	70.0%
!	GCACCACCGGTTGGTGCTCC+CGG	+	Chr5:9519492-9519511	MsG0580024773.01.T01:CDS	70.0%
!	GGAGCACCAACCGGTGGTGC+TGG	-	Chr5:9519492-9519511	None:intergenic	70.0%
!!	GGTCCGGGAGCACCAACCGG+TGG	-	Chr5:9519498-9519517	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	9518973	9520339	9518973	ID=MsG0580024773.01;Name=MsG0580024773.01
Chr5	mRNA	9518973	9520339	9518973	ID=MsG0580024773.01.T01;Parent=MsG0580024773.01;Name=MsG0580024773.01.T01;_AED=0.27;_eAED=0.34;_QI=0\|0\|0\|1\|0\|0\|2\|0\|262
Chr5	exon	9518973	9519608	9518973	ID=MsG0580024773.01.T01:exon:26473;Parent=MsG0580024773.01.T01
Chr5	exon	9520187	9520339	9520187	ID=MsG0580024773.01.T01:exon:26474;Parent=MsG0580024773.01.T01
Chr5	CDS	9518973	9519608	9518973	ID=MsG0580024773.01.T01:cds;Parent=MsG0580024773.01.T01
Chr5	CDS	9520187	9520339	9520187	ID=MsG0580024773.01.T01:cds;Parent=MsG0580024773.01.T01

Gene Sequence

>MsG0580024773.01.T01

ATGGATCGTAAAAACGTTCTCTCACTCGCATTGATCTGCATTGTCTTCGCCGGCGTCGGAGGTCAATCTCCGTCGTCAGCTCCGACTACATCACCACCTACCGTCACCACTCCATCCGTTGCTCCCGTCGCAGCACCTACCAAACCAAAATCACCCGCTCCAGTCGCTTCTCCAAAATCATCACCACCAGCTTCATCTCCCACCGTTGCAACTGTAACCCCAGCAGTGTCTCCTGCTGCTCCAGTTCCGGTAGCTAAATCTCCAGCTGCATCTCCTCCAGTCGTTGCTCCAGTGAGTTCACCACCAAAACCAGCTCCAGTGAGTTCACCACCAGCATCAGTTCCAGTGAGTTCTCCACCAACACCAGTTCCGGTGAGTTCACCACCGACAGTTTCCACACCTGCAGTAACACCAAGCGCTGAGGTTCCCGCTGCAGCTCCAAGCAAATCAAAGAAGAAGACAAAGAAAGGTAAGAAACACAGTGCACCAGCACCTTCACCGGCATTGGAAGGACCTCCAGCACCACCGGTTGGTGCTCCCGGACCTAGTCTCGATGCTTCTTCTCCCGGTCCAGCATCTGCTGCCGACGAGGTACATTCATGTCTCCTCTTTGCGTTTTTATTTTATTTTGTGCATATTGCCAATAGCAATATGAGAAACAAAATAATTGAGTCAATACTGAGATCTGAATTTTCTGTATTACAGAGTGGAGCAGAAACAATCAGATGCTTGCAGAAGGTGATAGGATCATTGGCATTGGGCTTGGCTAGCCTTGTTTTTATGTTCTAG

Protein sequence

>MsG0580024773.01.T01

MDRKNVLSLALICIVFAGVGGQSPSSAPTTSPPTVTTPSVAPVAAPTKPKSPAPVASPKSSPPASSPTVATVTPAVSPAAPVPVAKSPAASPPVVAPVSSPPKPAPVSSPPASVPVSSPPTPVPVSSPPTVSTPAVTPSAEVPAAAPSKSKKKTKKGKKHSAPAPSPALEGPPAPPVGAPGPSLDASSPGPASAADEVHSCLLFAFLFYFVHIANSNMRNKIIESILRSEFSVLQSGAETIRCLQKVIGSLALGLASLVFMF*