AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023151.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023151.01.T01 MTR_5g464500 65.854 123 42 0 1 123 1 123 4.31e-44 145
MsG0480023151.01.T01 MTR_8g088110 93.827 81 5 0 177 257 154 234 7.78e-44 148
MsG0480023151.01.T01 MTR_1g062150 58.095 105 44 0 20 124 19 123 4.03e-36 125
MsG0480023151.01.T01 MTR_1g035030 70.787 89 26 0 2 90 204 292 9.17e-35 127
MsG0480023151.01.T01 MTR_3g040600 40.541 148 82 1 2 143 34 181 1.06e-32 118
MsG0480023151.01.T01 MTR_8g024270 53.043 115 54 0 14 128 31 145 5.57e-32 119
MsG0480023151.01.T01 MTR_4g094385 44.615 130 70 1 14 143 52 179 8.23e-32 115
MsG0480023151.01.T01 MTR_5g095580 46.212 132 65 2 6 131 2 133 6.74e-31 114
MsG0480023151.01.T01 MTR_5g074450 45.390 141 71 1 2 136 367 507 1.78e-28 113
MsG0480023151.01.T01 MTR_4g060705 55.446 101 45 0 9 109 44 144 1.81e-28 106
MsG0480023151.01.T01 MTR_5g040855 53.191 94 40 1 42 131 1 94 8.63e-27 102
MsG0480023151.01.T01 MTR_6g034785 47.863 117 47 2 14 130 37 139 1.25e-26 103
MsG0480023151.01.T01 MTR_3g093740 46.457 127 62 2 2 122 140 266 6.72e-26 103
MsG0480023151.01.T01 MTR_3g065700 29.365 252 101 4 6 180 1 252 1.07e-24 99.4
MsG0480023151.01.T01 MTR_4g076130 40.580 138 76 1 1 132 33 170 1.17e-24 97.1
MsG0480023151.01.T01 MTR_2g089160 29.808 208 82 3 37 181 2 208 1.77e-23 95.1
MsG0480023151.01.T01 MTR_4g005490 54.955 111 42 2 26 128 163 273 2.83e-23 96.3
MsG0480023151.01.T01 MTR_3g081050 45.536 112 61 0 13 124 232 343 2.25e-22 95.1
MsG0480023151.01.T01 MTR_3g104590 45.312 128 64 1 2 123 27 154 8.87e-22 90.1
MsG0480023151.01.T01 MTR_1g094270 40.458 131 51 1 2 132 74 177 1.15e-21 91.7
MsG0480023151.01.T01 MTR_3g031290 50.962 104 51 0 19 122 18 121 2.83e-21 90.5
MsG0480023151.01.T01 MTR_7g081765 46.281 121 58 4 9 128 24 138 5.69e-21 88.2
MsG0480023151.01.T01 MTR_6g079500 31.064 235 126 5 11 239 35 239 1.42e-20 88.2
MsG0480023151.01.T01 MTR_7g029185 57.971 69 29 0 65 133 37 105 3.71e-20 83.2
MsG0480023151.01.T01 MTR_3g085120 77.358 53 12 0 1 53 90 142 1.00e-19 86.3
MsG0480023151.01.T01 MTR_4g028790 52.055 73 31 1 63 135 1 69 1.21e-19 82.8
MsG0480023151.01.T01 MTR_0043s0050 43.750 128 71 1 11 138 49 175 1.28e-19 84.7
MsG0480023151.01.T01 MTR_8g466580 44.444 108 60 0 17 124 7 114 6.05e-19 81.3
MsG0480023151.01.T01 MTR_3g012200 48.936 94 48 0 23 116 51 144 1.01e-18 82.0
MsG0480023151.01.T01 MTR_6g070940 47.727 88 45 1 4 90 41 128 2.29e-18 80.1
MsG0480023151.01.T01 MTR_1g068995 50.746 67 33 0 23 89 43 109 3.56e-17 75.9
MsG0480023151.01.T01 MTR_6g037960 47.619 84 39 1 4 82 12 95 4.29e-17 74.7
MsG0480023151.01.T01 MTR_3g064220 72.000 50 14 0 72 121 17 66 5.99e-17 75.1
MsG0480023151.01.T01 MTR_8g079000 54.054 74 32 1 11 82 31 104 1.33e-16 75.5
MsG0480023151.01.T01 MTR_3g434770 36.441 118 75 0 62 179 6 123 3.15e-16 73.9
MsG0480023151.01.T01 MTR_1g026690 39.286 112 62 3 14 124 205 311 3.58e-16 77.4
MsG0480023151.01.T01 MTR_3g077090 41.414 99 42 1 4 102 28 110 1.09e-15 73.9
MsG0480023151.01.T01 MTR_1g057730 53.030 66 31 0 1 66 228 293 3.02e-15 74.7
MsG0480023151.01.T01 MTR_1g070315 41.121 107 41 2 14 120 69 153 5.71e-15 72.4
MsG0480023151.01.T01 MTR_6g022740 49.333 75 38 0 43 117 113 187 8.92e-15 71.2
MsG0480023151.01.T01 MTR_3g068195 52.055 73 33 1 69 139 422 494 1.41e-14 73.2
MsG0480023151.01.T01 MTR_5g038480 32.374 139 49 2 63 157 1 138 1.65e-14 69.3
MsG0480023151.01.T01 MTR_3g462420 50.704 71 35 0 12 82 79 149 2.20e-14 69.3
MsG0480023151.01.T01 MTR_2g090750 34.615 130 73 5 2 124 460 584 1.45e-13 70.5
MsG0480023151.01.T01 MTR_4g088860 45.205 73 40 0 59 131 64 136 1.74e-13 66.6
MsG0480023151.01.T01 MTR_4g056980 42.045 88 51 0 14 101 127 214 3.03e-13 67.4
MsG0480023151.01.T01 MTR_7g052100 41.667 84 44 1 59 137 3 86 5.17e-13 67.0
MsG0480023151.01.T01 MTR_4g113395 46.575 73 33 2 2 68 128 200 6.43e-13 67.0
MsG0480023151.01.T01 MTR_1g046940 46.739 92 49 0 31 122 162 253 7.82e-13 67.4
MsG0480023151.01.T01 MTR_7g065810 46.753 77 35 1 2 72 166 242 1.40e-12 67.0
MsG0480023151.01.T01 MTR_5g464420 43.836 73 41 0 59 131 2 74 2.36e-12 63.5
MsG0480023151.01.T01 MTR_1g044185 43.750 80 38 2 2 75 79 157 2.67e-12 63.9
MsG0480023151.01.T01 MTR_1g040225 50.820 61 30 0 63 123 1 61 8.80e-12 61.2
MsG0480023151.01.T01 MTR_5g054790 35.294 119 54 4 59 157 3 118 1.40e-11 61.2
MsG0480023151.01.T01 MTR_4g415380 31.884 138 77 3 14 143 59 187 1.58e-11 62.8
MsG0480023151.01.T01 MTR_8g069860 50.000 58 29 0 17 74 81 138 1.68e-11 60.8
MsG0480023151.01.T01 MTR_6g033030 41.667 84 42 2 2 78 85 168 1.71e-11 62.8
MsG0480023151.01.T01 MTR_2g090795 63.265 49 18 0 63 111 1 49 2.32e-11 61.6
MsG0480023151.01.T01 MTR_4g079520 38.542 96 30 2 123 190 2 96 4.16e-11 58.5
MsG0480023151.01.T01 MTR_7g073570 42.105 95 52 1 1 92 281 375 6.23e-11 62.4
MsG0480023151.01.T01 MTR_1g033430 44.286 70 39 0 63 132 1 70 8.52e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023151.01.T01 AT1G29390 57.471 87 36 1 172 257 97 183 1.12e-26 102
MsG0480023151.01.T01 AT1G29390 57.471 87 36 1 172 257 140 226 4.59e-26 102
MsG0480023151.01.T01 AT1G29395 57.317 82 34 1 172 252 139 220 4.06e-25 99.8

Find 76 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATTGATTGCGGTGTATT+TGG 0.202554 4:+81490138 MsG0480023151.01.T01:CDS
AGATAAATGGTTGTGGAGTT+TGG 0.216264 4:+81486805 MsG0480023151.01.T01:CDS
GTGTCTGCGATGTGCTCTTT+AGG 0.225813 4:+81486665 MsG0480023151.01.T01:CDS
GTTGGAATGTTGATATTATT+TGG 0.278093 4:+81490328 MsG0480023151.01.T01:three_prime_UTR
GTTATTCAATTTAGTCATAT+TGG 0.281659 4:+81487171 MsG0480023151.01.T01:CDS
ACTGGAAAATGTTACTTTGC+AGG 0.303230 4:+81486772 MsG0480023151.01.T01:CDS
CTCATGAGGCTGTGAGATTA+AGG 0.311797 4:+81489994 MsG0480023151.01.T01:CDS
ACCAAGAGTAACGCTATAAA+TGG 0.318021 4:-81489960 None:intergenic
GGCACTACGAACAGTATAAA+TGG 0.329548 4:-81486837 None:intergenic
TGTCTGCGATGTGCTCTTTA+GGG 0.349708 4:+81486666 MsG0480023151.01.T01:CDS
GACGAGGCGATCGATCTTAC+AGG 0.352122 4:+81487206 MsG0480023151.01.T01:CDS
ATGTTACTTTGCAGGTTACT+AGG 0.359772 4:+81486780 MsG0480023151.01.T01:CDS
AGGTTACTAGGGAAGATAAA+TGG 0.366536 4:+81486792 MsG0480023151.01.T01:CDS
AGATCAAGTCAGTAACCTTT+AGG 0.371788 4:+81487317 MsG0480023151.01.T01:CDS
GGTGGGTGGAGTGTCGTTAC+GGG 0.376041 4:+81486595 MsG0480023151.01.T01:CDS
TGCTACTGTGATAGATCATT+TGG 0.379678 4:+81487149 MsG0480023151.01.T01:CDS
GGAGACGTAGGTTGTTTGCT+TGG 0.384731 4:+81486717 MsG0480023151.01.T01:CDS
GGGTGGGTGGAGTGTCGTTA+CGG 0.388941 4:+81486594 MsG0480023151.01.T01:CDS
TTGATGGCGGAGCTTGGTCT+TGG 0.401589 4:+81486696 MsG0480023151.01.T01:CDS
AGTCATGTTAGTCGCTTTGT+TGG 0.404994 4:+81486536 MsG0480023151.01.T01:CDS
TATTATGTTTGATACTCAAT+TGG 0.424445 4:+81490365 MsG0480023151.01.T01:three_prime_UTR
GTTTGCTTGGGAGGAGGAGT+TGG 0.428253 4:+81486730 MsG0480023151.01.T01:CDS
GAGACGTAGGTTGTTTGCTT+GGG 0.429656 4:+81486718 MsG0480023151.01.T01:CDS
TTAAATAATGGAGTTAGAAT+CGG 0.451444 4:+81490403 MsG0480023151.01.T01:three_prime_UTR
TCACTTCCCTTCAATTATCA+TGG 0.453620 4:+81487361 MsG0480023151.01.T01:CDS
TGCGATGTGCTCTTTAGGGT+GGG 0.455673 4:+81486670 MsG0480023151.01.T01:CDS
CTTGGGAGGAGGAGTTGGTA+GGG 0.456335 4:+81486735 MsG0480023151.01.T01:CDS
AGGAGTTGGTAGGGGAACTT+AGG 0.457877 4:+81486744 MsG0480023151.01.T01:CDS
TTGTTGCTTCTCATCTGAGT+TGG 0.458098 4:+81490256 MsG0480023151.01.T01:exon
ATATGATTTGTCGATGTTGA+AGG 0.458613 4:+81486634 MsG0480023151.01.T01:CDS
ACATTTCTCAAGAACAAGCT+TGG 0.467961 4:+81490168 MsG0480023151.01.T01:CDS
GCTTGGGAGGAGGAGTTGGT+AGG 0.473474 4:+81486734 MsG0480023151.01.T01:CDS
GCCATTTATAGCGTTACTCT+TGG 0.480930 4:+81489959 MsG0480023151.01.T01:CDS
TTCAATTGTTTCCACCTTAG+CGG 0.484293 4:+81490210 MsG0480023151.01.T01:CDS
CGATGTGCTCTTTAGGGTGG+GGG 0.489716 4:+81486672 MsG0480023151.01.T01:CDS
CCACCAACCATGATAATTGA+AGG 0.490385 4:-81487368 None:intergenic
AAATGATCTATCACAGTAGC+AGG 0.491491 4:-81487147 None:intergenic
TGGACCGATGTTTGGGTGGG+TGG 0.495915 4:+81486581 MsG0480023151.01.T01:CDS
ACGTAGGTTGTTTGCTTGGG+AGG 0.495975 4:+81486721 MsG0480023151.01.T01:CDS
TAGGTTGTTTGCTTGGGAGG+AGG 0.497555 4:+81486724 MsG0480023151.01.T01:CDS
TTTCACCTTCAACCACCTAA+AGG 0.497564 4:-81487332 None:intergenic
TTAAAATTGAAATGTGGAGG+AGG 0.500951 4:+81486477 None:intergenic
TATGATTTGTCGATGTTGAA+GGG 0.500996 4:+81486635 MsG0480023151.01.T01:CDS
AGTAACCTTTAGGTGGTTGA+AGG 0.516769 4:+81487327 MsG0480023151.01.T01:CDS
TGTTACTTTGCAGGTTACTA+GGG 0.519556 4:+81486781 MsG0480023151.01.T01:CDS
CGTGATTTCTTTATTGATTG+CGG 0.531142 4:+81490129 MsG0480023151.01.T01:CDS
GTTTCCACCTTAGCGGTCAT+CGG 0.533114 4:+81490217 MsG0480023151.01.T01:CDS
GCGATGTGCTCTTTAGGGTG+GGG 0.535982 4:+81486671 MsG0480023151.01.T01:CDS
ATTCAATTTAGTCATATTGG+TGG 0.539934 4:+81487174 MsG0480023151.01.T01:CDS
CTAGGGAAGATAAATGGTTG+TGG 0.542591 4:+81486798 MsG0480023151.01.T01:CDS
CTGCGATGTGCTCTTTAGGG+TGG 0.544302 4:+81486669 MsG0480023151.01.T01:CDS
CGCAATCAATAAAGAAATCA+CGG 0.554346 4:-81490128 None:intergenic
TTGGGAGGAGGAGTTGGTAG+GGG 0.555640 4:+81486736 MsG0480023151.01.T01:CDS
TAAAATTGAAATGTGGAGGA+GGG 0.564123 4:+81486478 None:intergenic
TGATTTGTCGATGTTGAAGG+GGG 0.582042 4:+81486637 MsG0480023151.01.T01:CDS
GAACTCCACCTCTGACATGA+GGG 0.584088 4:+81490500 MsG0480023151.01.T01:three_prime_UTR
ATGATTTGTCGATGTTGAAG+GGG 0.584899 4:+81486636 MsG0480023151.01.T01:CDS
AAATTAAAATTGAAATGTGG+AGG 0.590415 4:+81486474 None:intergenic
GTTAGTCGCTTTGTTGGCGA+CGG 0.590645 4:+81486542 MsG0480023151.01.T01:CDS
TTTGCCAGGGACACAAAAGA+AGG 0.594762 4:+81490103 MsG0480023151.01.T01:intron
GATACCGATGACCGCTAAGG+TGG 0.607165 4:-81490221 None:intergenic
CACTCCACCCACCCAAACAT+CGG 0.610584 4:-81486585 None:intergenic
CTTAATCTCACAGCCTCATG+AGG 0.615359 4:-81489993 None:intergenic
AAGAACCCTCATGTCAGAGG+TGG 0.617947 4:-81490505 None:intergenic
GCAAAGAACCCTCATGTCAG+AGG 0.621006 4:-81490508 None:intergenic
TTGGAGAAATCATTTGACCA+AGG 0.622670 4:+81490187 MsG0480023151.01.T01:CDS
TCAAGTCAGTAACCTTTAGG+TGG 0.629162 4:+81487320 MsG0480023151.01.T01:CDS
GAGCTTGGTCTTGGAGACGT+AGG 0.635683 4:+81486705 MsG0480023151.01.T01:CDS
AGAACTCCACCTCTGACATG+AGG 0.635733 4:+81490499 MsG0480023151.01.T01:three_prime_UTR
AGTGATACCGATGACCGCTA+AGG 0.637419 4:-81490224 None:intergenic
CACCAACCATGATAATTGAA+GGG 0.637796 4:-81487367 None:intergenic
AACTCAGATGAGAAGCAACA+AGG 0.646149 4:-81490254 None:intergenic
AGGTGGAAACAATTGAACCT+TGG 0.646271 4:-81490204 None:intergenic
GGTGATTGTAGCTCCTCATG+AGG 0.668319 4:+81489980 MsG0480023151.01.T01:CDS
TCGGTGGGTAGGTGTATCTG+CGG 0.692846 4:+81487119 MsG0480023151.01.T01:intron
TTGGTGGTGCTACTAAGACG+AGG 0.746460 4:+81487190 MsG0480023151.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAATTAGATCAATAAA+AGG - Chr4:81488857-81488876 None:intergenic 10.0%
!! TAAATAAAAATAATACATGT+TGG + Chr4:81490310-81490329 MsG0480023151.01.T01:three_prime_UTR 10.0%
!!! ATTTTAATTTTTTTTTGAAG+AGG - Chr4:81487575-81487594 None:intergenic 10.0%
!!! TATTCTTTTTGAATATTAAT+TGG + Chr4:81489883-81489902 MsG0480023151.01.T01:intron 10.0%
!! AAAAAAGATAAAATTTCTTC+CGG + Chr4:81489906-81489925 MsG0480023151.01.T01:intron 15.0%
!! TAAACATGAGAATATAATTA+TGG - Chr4:81489464-81489483 None:intergenic 15.0%
!! TATTCAAAAAGAATAAAGAA+CGG - Chr4:81489878-81489897 None:intergenic 15.0%
!! TGTAAACAAATTCTTAAAAT+TGG + Chr4:81489553-81489572 MsG0480023151.01.T01:intron 15.0%
!!! AGAATATAATTATGGATTAT+TGG - Chr4:81489456-81489475 None:intergenic 15.0%
!!! CTTTTACATTGTAATTTATT+TGG + Chr4:81487075-81487094 MsG0480023151.01.T01:intron 15.0%
!!! CTTTTTACTTACTTAAATAA+TGG + Chr4:81490391-81490410 MsG0480023151.01.T01:three_prime_UTR 15.0%
!!! TCTAATTATTTTACACAAAT+TGG + Chr4:81488865-81488884 MsG0480023151.01.T01:intron 15.0%
!!! TTTTTTCTCATACAAAAATT+CGG + Chr4:81489527-81489546 MsG0480023151.01.T01:intron 15.0%
!! AATTTCTTAGAAAGAAATGT+AGG - Chr4:81489405-81489424 None:intergenic 20.0%
!! ATGAATATTCAAAATCTTGT+AGG + Chr4:81488587-81488606 MsG0480023151.01.T01:intron 20.0%
!! ATTTCTTAGAAAGAAATGTA+GGG - Chr4:81489404-81489423 None:intergenic 20.0%
!! CAAAATGAAAAGGAAATAAA+CGG - Chr4:81489655-81489674 None:intergenic 20.0%
!! CTCTCTCAATTTAATTATTA+TGG + Chr4:81488472-81488491 MsG0480023151.01.T01:intron 20.0%
!! GTTATTCAATTTAGTCATAT+TGG + Chr4:81487171-81487190 MsG0480023151.01.T01:CDS 20.0%
!! TAAAATCTAAATCTTCTCAA+TGG + Chr4:81489237-81489256 MsG0480023151.01.T01:intron 20.0%
!! TAATAATTAAATTGAGAGAG+AGG - Chr4:81488472-81488491 None:intergenic 20.0%
!! TATTATGTTTGATACTCAAT+TGG + Chr4:81490365-81490384 MsG0480023151.01.T01:three_prime_UTR 20.0%
!! TATTGTTTACTTCTAACTAT+TGG + Chr4:81489267-81489286 MsG0480023151.01.T01:intron 20.0%
!! TGAATATTCAAAATCTTGTA+GGG + Chr4:81488588-81488607 MsG0480023151.01.T01:intron 20.0%
!! TTTGTATGAGAAAAAATGTT+TGG - Chr4:81489523-81489542 None:intergenic 20.0%
!!! AATGGAACAATAAATGATTT+TGG - Chr4:81488643-81488662 None:intergenic 20.0%
!!! GAGAAGATTTAGATTTTAAA+TGG - Chr4:81489235-81489254 None:intergenic 20.0%
!!! TTAAATAATGGAGTTAGAAT+CGG + Chr4:81490403-81490422 MsG0480023151.01.T01:three_prime_UTR 20.0%
!!! TTCTTTTTTGCTTTTGTTTT+TGG + Chr4:81487433-81487452 MsG0480023151.01.T01:intron 20.0%
! AAAAAAAACAGAGAGAAGAT+AGG + Chr4:81487696-81487715 MsG0480023151.01.T01:intron 25.0%
! AAACAAAAATTAACCTACTG+AGG - Chr4:81487411-81487430 None:intergenic 25.0%
! AAATATATTACCACGACAAA+AGG - Chr4:81487544-81487563 None:intergenic 25.0%
! AAGAGAATAACACTTATTCT+TGG - Chr4:81488814-81488833 None:intergenic 25.0%
! ATATTAATACACTCCACATA+TGG - Chr4:81489806-81489825 None:intergenic 25.0%
! ATCCATTGTACAAAATGAAA+AGG - Chr4:81489665-81489684 None:intergenic 25.0%
! ATGAAATTTAGGAATCTTGA+GGG + Chr4:81488998-81489017 MsG0480023151.01.T01:intron 25.0%
! ATGTGGAGTGTATTAATATA+AGG + Chr4:81489807-81489826 MsG0480023151.01.T01:intron 25.0%
! ATTCAATTTAGTCATATTGG+TGG + Chr4:81487174-81487193 MsG0480023151.01.T01:CDS 25.0%
! GAACAAGAAAACAAAATACA+AGG - Chr4:81488721-81488740 None:intergenic 25.0%
! GTTGGAATGTTGATATTATT+TGG + Chr4:81490328-81490347 MsG0480023151.01.T01:three_prime_UTR 25.0%
! TCAATAGTAACACATAGTTT+GGG - Chr4:81489696-81489715 None:intergenic 25.0%
! TGTATAAGAGAATATATACC+TGG - Chr4:81488960-81488979 None:intergenic 25.0%
! TGTGGAGTGTATTAATATAA+GGG + Chr4:81489728-81489747 MsG0480023151.01.T01:intron 25.0%
! TTGATTACAGTGTTAATCTT+AGG + Chr4:81487901-81487920 MsG0480023151.01.T01:intron 25.0%
!! GTAAGCAAATTCATGTTTTT+GGG + Chr4:81490016-81490035 MsG0480023151.01.T01:intron 25.0%
!! TTCCTTTTCATTTTGTACAA+TGG + Chr4:81489660-81489679 MsG0480023151.01.T01:intron 25.0%
!!! GAAAACCAACATTTTGTTTT+AGG + Chr4:81489078-81489097 MsG0480023151.01.T01:intron 25.0%
!!! GTTTTCACCACTTTTAATAA+AGG - Chr4:81489064-81489083 None:intergenic 25.0%
!!! TAAGCAAATTCATGTTTTTG+GGG + Chr4:81490017-81490036 MsG0480023151.01.T01:intron 25.0%
AAAAATTAACCTACTGAGGA+TGG - Chr4:81487407-81487426 None:intergenic 30.0%
AAAAGAGTAGATGAGAATGT+AGG - Chr4:81488249-81488268 None:intergenic 30.0%
AATGAAAAGGAAATAAACGG+AGG - Chr4:81489652-81489671 None:intergenic 30.0%
AATGTTACCACTATATTACG+TGG - Chr4:81487849-81487868 None:intergenic 30.0%
ACTGTCATTCAAAAAGTTGT+AGG - Chr4:81486861-81486880 None:intergenic 30.0%
AGGTTCCTAAAACAAAATGT+TGG - Chr4:81489086-81489105 None:intergenic 30.0%
ATATTAATACACTCCACAGT+TGG - Chr4:81489726-81489745 None:intergenic 30.0%
ATCAGAGAGAGGAAATAAAA+AGG - Chr4:81488276-81488295 None:intergenic 30.0%
ATGATATCATCATCATCGTT+AGG + Chr4:81488063-81488082 MsG0480023151.01.T01:intron 30.0%
CATAAATGAAGAACGAAAGA+CGG - Chr4:81488548-81488567 None:intergenic 30.0%
CATATGGCCTTTATTAAAAG+TGG + Chr4:81489054-81489073 MsG0480023151.01.T01:intron 30.0%
CATGAAATTTAGGAATCTTG+AGG + Chr4:81488997-81489016 MsG0480023151.01.T01:intron 30.0%
CGCAATCAATAAAGAAATCA+CGG - Chr4:81490131-81490150 None:intergenic 30.0%
CTGTGGAGTGTATTAATATA+AGG + Chr4:81489727-81489746 MsG0480023151.01.T01:intron 30.0%
GAAAAGTAAAAACTGCAAAG+TGG + Chr4:81489142-81489161 MsG0480023151.01.T01:intron 30.0%
GAGTCTCAGTAATATTTACA+AGG - Chr4:81487471-81487490 None:intergenic 30.0%
GTCAATAGTAACACATAGTT+TGG - Chr4:81489697-81489716 None:intergenic 30.0%
GTGGAGTGTATTAATATAAG+GGG + Chr4:81489729-81489748 MsG0480023151.01.T01:intron 30.0%
TAAATCTCAACAACACCATA+TGG + Chr4:81489038-81489057 MsG0480023151.01.T01:intron 30.0%
TGAAATTTAGGAATCTTGAG+GGG + Chr4:81488999-81489018 MsG0480023151.01.T01:intron 30.0%
TGAATATTAGGAGTAGTGAA+AGG - Chr4:81488418-81488437 None:intergenic 30.0%
TGATATCATCATCATCGTTA+GGG + Chr4:81488064-81488083 MsG0480023151.01.T01:intron 30.0%
TGTAATGAGAAAACTTGTAC+AGG - Chr4:81489323-81489342 None:intergenic 30.0%
! AACACATAGTTTGGGTATTT+TGG - Chr4:81489688-81489707 None:intergenic 30.0%
! ATATGATTTGTCGATGTTGA+AGG + Chr4:81486634-81486653 MsG0480023151.01.T01:CDS 30.0%
! ATTGACTCTCAATTATGTGT+AGG + Chr4:81487018-81487037 MsG0480023151.01.T01:intron 30.0%
! CACTTTTAATAAAGGCCATA+TGG - Chr4:81489056-81489075 None:intergenic 30.0%
! CGTGATTTCTTTATTGATTG+CGG + Chr4:81490129-81490148 MsG0480023151.01.T01:CDS 30.0%
! CTGTTTGGAACCATATTTAT+CGG + Chr4:81487100-81487119 MsG0480023151.01.T01:intron 30.0%
! GGTAAGCAAATTCATGTTTT+TGG + Chr4:81490015-81490034 MsG0480023151.01.T01:intron 30.0%
! TAAATAGGGTAAGTTGACAA+CGG - Chr4:81490051-81490070 None:intergenic 30.0%
! TATGATTTGTCGATGTTGAA+GGG + Chr4:81486635-81486654 MsG0480023151.01.T01:CDS 30.0%
! TTTATTGATTGCGGTGTATT+TGG + Chr4:81490138-81490157 MsG0480023151.01.T01:CDS 30.0%
!! ATCTTGTAGGGTTTTAATAC+TGG + Chr4:81488600-81488619 MsG0480023151.01.T01:intron 30.0%
!! GTAATTTATTTGGCTCTGTT+TGG + Chr4:81487085-81487104 MsG0480023151.01.T01:intron 30.0%
!!! ATTTTGTTTTAGGAACCTCA+GGG + Chr4:81489088-81489107 MsG0480023151.01.T01:intron 30.0%
AAATGATCTATCACAGTAGC+AGG - Chr4:81487150-81487169 None:intergenic 35.0%
AATCTTAGGAGTTTGAGAGT+GGG + Chr4:81487915-81487934 MsG0480023151.01.T01:intron 35.0%
AATGCTAAACTCTATTTCGC+AGG + Chr4:81487285-81487304 MsG0480023151.01.T01:intron 35.0%
ACAGTTTCCTCTTGATATTG+CGG + Chr4:81486876-81486895 MsG0480023151.01.T01:intron 35.0%
ACATTTCTCAAGAACAAGCT+TGG + Chr4:81490168-81490187 MsG0480023151.01.T01:CDS 35.0%
ACCAAGAGTAACGCTATAAA+TGG - Chr4:81489963-81489982 None:intergenic 35.0%
ACCTGGAATCAAAGAATATC+CGG - Chr4:81489928-81489947 None:intergenic 35.0%
ACTCTCAATTATGTGTAGGA+GGG + Chr4:81487022-81487041 MsG0480023151.01.T01:intron 35.0%
AGATAAATGGTTGTGGAGTT+TGG + Chr4:81486805-81486824 MsG0480023151.01.T01:CDS 35.0%
AGATCAAGTCAGTAACCTTT+AGG + Chr4:81487317-81487336 MsG0480023151.01.T01:CDS 35.0%
AGGTTACTAGGGAAGATAAA+TGG + Chr4:81486792-81486811 MsG0480023151.01.T01:CDS 35.0%
ATCAATGACGTACTTTATCC+AGG - Chr4:81488698-81488717 None:intergenic 35.0%
ATTAATATAAGGGGCAACTG+TGG + Chr4:81489818-81489837 MsG0480023151.01.T01:intron 35.0%
ATTAGGAGTAGTGAAAGGAT+AGG - Chr4:81488413-81488432 None:intergenic 35.0%
CAATAACTCATCGTCGAAAA+AGG - Chr4:81486996-81487015 None:intergenic 35.0%
CACCAACCATGATAATTGAA+GGG - Chr4:81487370-81487389 None:intergenic 35.0%
CTGGAATATGAAAGAAGAGA+CGG - Chr4:81488941-81488960 None:intergenic 35.0%
GAAATTTAGGAATCTTGAGG+GGG + Chr4:81489000-81489019 MsG0480023151.01.T01:intron 35.0%
GATCGATCTTACAGGTTATT+TGG + Chr4:81487214-81487233 MsG0480023151.01.T01:intron 35.0%
GTAGAGATCCACTGAATATT+AGG - Chr4:81488430-81488449 None:intergenic 35.0%
GTATTAATATAAGGGCAACC+CGG + Chr4:81489736-81489755 MsG0480023151.01.T01:intron 35.0%
TAAAACACTTGAAACACTCC+TGG + Chr4:81489593-81489612 MsG0480023151.01.T01:intron 35.0%
TAATACACTCCACATATGGT+GGG - Chr4:81489802-81489821 None:intergenic 35.0%
TAATCTTAGGAGTTTGAGAG+TGG + Chr4:81487914-81487933 MsG0480023151.01.T01:intron 35.0%
TACACAAATTGGACATACAG+AGG + Chr4:81488876-81488895 MsG0480023151.01.T01:intron 35.0%
TCACTACTCCTAATATTCAG+TGG + Chr4:81488419-81488438 MsG0480023151.01.T01:intron 35.0%
TCACTTCCCTTCAATTATCA+TGG + Chr4:81487361-81487380 MsG0480023151.01.T01:CDS 35.0%
TCATCAGCACATAACAGATT+TGG - Chr4:81488571-81488590 None:intergenic 35.0%
TGCATTTACAGTTGAAGTTG+AGG - Chr4:81488106-81488125 None:intergenic 35.0%
TGCTACTGTGATAGATCATT+TGG + Chr4:81487149-81487168 MsG0480023151.01.T01:CDS 35.0%
TTAATACACTCCACATATGG+TGG - Chr4:81489803-81489822 None:intergenic 35.0%
TTAGGAGTAGTGAAAGGATA+GGG - Chr4:81488412-81488431 None:intergenic 35.0%
TTCAATTGTTTCCACCTTAG+CGG + Chr4:81490210-81490229 MsG0480023151.01.T01:CDS 35.0%
TTCCCTTCAATTATCATGGT+TGG + Chr4:81487365-81487384 MsG0480023151.01.T01:intron 35.0%
TTGCAACAACGTGAGAAATA+CGG + Chr4:81487238-81487257 MsG0480023151.01.T01:intron 35.0%
TTGGAACCATATTTATCGGT+GGG + Chr4:81487104-81487123 MsG0480023151.01.T01:intron 35.0%
TTGGAGAAATCATTTGACCA+AGG + Chr4:81490187-81490206 MsG0480023151.01.T01:CDS 35.0%
! ACGGTAAAAATACGCTCTTT+TGG + Chr4:81486561-81486580 MsG0480023151.01.T01:CDS 35.0%
! ATGATTTGTCGATGTTGAAG+GGG + Chr4:81486636-81486655 MsG0480023151.01.T01:CDS 35.0%
! ATTTGTATTTTGCGTGAGGA+GGG + Chr4:81486503-81486522 MsG0480023151.01.T01:CDS 35.0%
! GAGACTCTCTTTGTGATTTT+TGG + Chr4:81487484-81487503 MsG0480023151.01.T01:intron 35.0%
! TAAGGATGTTCCTTTGAAGA+TGG + Chr4:81486921-81486940 MsG0480023151.01.T01:intron 35.0%
! TAGCATAAGCCTTTTATGCT+AGG + Chr4:81489168-81489187 MsG0480023151.01.T01:intron 35.0%
! TCTACTCTCTTTTCCACAAT+AGG + Chr4:81489371-81489390 MsG0480023151.01.T01:intron 35.0%
! TTTGGAACCATATTTATCGG+TGG + Chr4:81487103-81487122 MsG0480023151.01.T01:intron 35.0%
!! ACTGGAAAATGTTACTTTGC+AGG + Chr4:81486772-81486791 MsG0480023151.01.T01:CDS 35.0%
!! AGGGTTTTAATACTGGCAAA+GGG + Chr4:81488607-81488626 MsG0480023151.01.T01:intron 35.0%
!! ATGATGATGGATCTGTTGTT+CGG - Chr4:81488161-81488180 None:intergenic 35.0%
!! ATGTTACTTTGCAGGTTACT+AGG + Chr4:81486780-81486799 MsG0480023151.01.T01:CDS 35.0%
!! TAGGGTTTTAATACTGGCAA+AGG + Chr4:81488606-81488625 MsG0480023151.01.T01:intron 35.0%
!! TGTTACTTTGCAGGTTACTA+GGG + Chr4:81486781-81486800 MsG0480023151.01.T01:CDS 35.0%
!!! AGGAGTGTTTCAAGTGTTTT+AGG - Chr4:81489594-81489613 None:intergenic 35.0%
!!! CATTTTGTTTTAGGAACCTC+AGG + Chr4:81489087-81489106 MsG0480023151.01.T01:intron 35.0%
AACCATATTTATCGGTGGGT+AGG + Chr4:81487108-81487127 MsG0480023151.01.T01:intron 40.0%
AACTCAGATGAGAAGCAACA+AGG - Chr4:81490257-81490276 None:intergenic 40.0%
AAGTCCAAAACTACCACCAA+CGG + Chr4:81488361-81488380 MsG0480023151.01.T01:intron 40.0%
ACATCCTTATGCCAAAAGGA+AGG - Chr4:81486910-81486929 None:intergenic 40.0%
ACATCGTTATTCTCTTTGCC+AGG + Chr4:81490089-81490108 MsG0480023151.01.T01:intron 40.0%
AGATCCTTCACTCGTCATTA+CGG + Chr4:81488322-81488341 MsG0480023151.01.T01:intron 40.0%
AGGAACATCCTTATGCCAAA+AGG - Chr4:81486914-81486933 None:intergenic 40.0%
AGGTGGAAACAATTGAACCT+TGG - Chr4:81490207-81490226 None:intergenic 40.0%
AGTAACCTTTAGGTGGTTGA+AGG + Chr4:81487327-81487346 MsG0480023151.01.T01:CDS 40.0%
CATCGTTATTCTCTTTGCCA+GGG + Chr4:81490090-81490109 MsG0480023151.01.T01:intron 40.0%
CCACCAACCATGATAATTGA+AGG - Chr4:81487371-81487390 None:intergenic 40.0%
CCTTCAATTATCATGGTTGG+TGG + Chr4:81487368-81487387 MsG0480023151.01.T01:intron 40.0%
CGTCTCTTCTTTCATATTCC+AGG + Chr4:81488939-81488958 MsG0480023151.01.T01:intron 40.0%
CTAGGGAAGATAAATGGTTG+TGG + Chr4:81486798-81486817 MsG0480023151.01.T01:CDS 40.0%
GACTCTCAATTATGTGTAGG+AGG + Chr4:81487021-81487040 MsG0480023151.01.T01:intron 40.0%
GCAAACAACACCATCTTCAA+AGG - Chr4:81486934-81486953 None:intergenic 40.0%
GCCATTTATAGCGTTACTCT+TGG + Chr4:81489959-81489978 MsG0480023151.01.T01:CDS 40.0%
GGCACTACGAACAGTATAAA+TGG - Chr4:81486840-81486859 None:intergenic 40.0%
TAATCCCTGCCTAGCATAAA+AGG - Chr4:81489180-81489199 None:intergenic 40.0%
TAGATGAGAATGTAGGTACC+AGG - Chr4:81488242-81488261 None:intergenic 40.0%
TATTCCGTAATGACGAGTGA+AGG - Chr4:81488329-81488348 None:intergenic 40.0%
TCAAGTCAGTAACCTTTAGG+TGG + Chr4:81487320-81487339 MsG0480023151.01.T01:CDS 40.0%
TCCGGATATTCTTTGATTCC+AGG + Chr4:81489924-81489943 MsG0480023151.01.T01:intron 40.0%
TGGACATACAGAGGTAGATA+TGG + Chr4:81488885-81488904 MsG0480023151.01.T01:intron 40.0%
TTTCACCTTCAACCACCTAA+AGG - Chr4:81487335-81487354 None:intergenic 40.0%
! AGTCATGTTAGTCGCTTTGT+TGG + Chr4:81486536-81486555 MsG0480023151.01.T01:CDS 40.0%
! AGTGAAAAGAGTGCATCAGA+TGG - Chr4:81489296-81489315 None:intergenic 40.0%
! ATAAGCCTTTTATGCTAGGC+AGG + Chr4:81489172-81489191 MsG0480023151.01.T01:intron 40.0%
! CATTTGTATTTTGCGTGAGG+AGG + Chr4:81486502-81486521 MsG0480023151.01.T01:CDS 40.0%
! CTGATCGTGTTTCTGTTGTT+TGG + Chr4:81488291-81488310 MsG0480023151.01.T01:intron 40.0%
! GGACATTTGTATTTTGCGTG+AGG + Chr4:81486499-81486518 MsG0480023151.01.T01:CDS 40.0%
! GTAAGTTGACAACGGTTCAA+AGG - Chr4:81490043-81490062 None:intergenic 40.0%
! TAAGCCTTTTATGCTAGGCA+GGG + Chr4:81489173-81489192 MsG0480023151.01.T01:intron 40.0%
! TGATTTGTCGATGTTGAAGG+GGG + Chr4:81486637-81486656 MsG0480023151.01.T01:CDS 40.0%
! TTGTTGCTTCTCATCTGAGT+TGG + Chr4:81490256-81490275 MsG0480023151.01.T01:exon 40.0%
! TTTGTATTTTGCGTGAGGAG+GGG + Chr4:81486504-81486523 MsG0480023151.01.T01:CDS 40.0%
!! TGATGATGGATCTGTTGTTC+GGG - Chr4:81488160-81488179 None:intergenic 40.0%
!!! AAATCCGTTGGTGGTAGTTT+TGG - Chr4:81488368-81488387 None:intergenic 40.0%
AAACACACGAAATCCGTTGG+TGG - Chr4:81488377-81488396 None:intergenic 45.0%
AAACTCTATTTCGCAGGTGG+TGG + Chr4:81487291-81487310 MsG0480023151.01.T01:intron 45.0%
AATGGCAACTCAAGTTCACC+TGG - Chr4:81489945-81489964 None:intergenic 45.0%
ACAGAAACACGATCAGAGAG+AGG - Chr4:81488287-81488306 None:intergenic 45.0%
ACAGAGGTAGATATGGTGTG+TGG + Chr4:81488892-81488911 MsG0480023151.01.T01:intron 45.0%
ACCATGGGAATCAAGTGAGA+TGG - Chr4:81489624-81489643 None:intergenic 45.0%
AGTACACCAGTTGGCACAAA+GGG + Chr4:81487823-81487842 MsG0480023151.01.T01:intron 45.0%
ATCCAGGAAAAAACAGCTGC+AGG - Chr4:81488682-81488701 None:intergenic 45.0%
CAAAGGGCCACGTAATATAG+TGG + Chr4:81487839-81487858 MsG0480023151.01.T01:intron 45.0%
CACCTACCCACCGATAAATA+TGG - Chr4:81487113-81487132 None:intergenic 45.0%
CCAGCTCCAAAATTGAGAAG+TGG + Chr4:81487787-81487806 MsG0480023151.01.T01:intron 45.0%
CGCATGAGCGCATGAAATTT+AGG + Chr4:81488987-81489006 MsG0480023151.01.T01:intron 45.0%
CTCATGAGGCTGTGAGATTA+AGG + Chr4:81489994-81490013 MsG0480023151.01.T01:CDS 45.0%
CTCCTGTCCTGAGTTTAACT+GGG + Chr4:81487940-81487959 MsG0480023151.01.T01:intron 45.0%
CTTAATCTCACAGCCTCATG+AGG - Chr4:81489996-81490015 None:intergenic 45.0%
GAATCTTGAGGGGGTAACAA+TGG + Chr4:81489009-81489028 MsG0480023151.01.T01:intron 45.0%
GAGACGTAGGTTGTTTGCTT+GGG + Chr4:81486718-81486737 MsG0480023151.01.T01:CDS 45.0%
GATCTACCCCAGTTAAACTC+AGG - Chr4:81487950-81487969 None:intergenic 45.0%
GCTAAACTCTATTTCGCAGG+TGG + Chr4:81487288-81487307 MsG0480023151.01.T01:intron 45.0%
GGAAAACACACGAAATCCGT+TGG - Chr4:81488380-81488399 None:intergenic 45.0%
GGGGCTTGCAAAGCAAATAA+TGG - Chr4:81488661-81488680 None:intergenic 45.0%
GTCTGTTTACCATCCTCAGT+AGG + Chr4:81487395-81487414 MsG0480023151.01.T01:intron 45.0%
TAAGCACATCTTGTGCTAGG+AGG + Chr4:81487517-81487536 MsG0480023151.01.T01:intron 45.0%
TAGAATCAGTATGTGCCCTG+AGG - Chr4:81489106-81489125 None:intergenic 45.0%
TATGCCAAAAGGAAGGTAGC+TGG - Chr4:81486903-81486922 None:intergenic 45.0%
TCAAGTGAGATGGATGAACC+AGG - Chr4:81489614-81489633 None:intergenic 45.0%
TCATGATAGACTCTCCACCA+AGG + Chr4:81486966-81486985 MsG0480023151.01.T01:intron 45.0%
TCCAGGAAAAAACAGCTGCA+GGG - Chr4:81488681-81488700 None:intergenic 45.0%
TCCATCTCACTTGATTCCCA+TGG + Chr4:81489620-81489639 MsG0480023151.01.T01:intron 45.0%
TCCTAAGCACATCTTGTGCT+AGG + Chr4:81487514-81487533 MsG0480023151.01.T01:intron 45.0%
TCCTAGCACAAGATGTGCTT+AGG - Chr4:81487518-81487537 None:intergenic 45.0%
TCCTGTCCTGAGTTTAACTG+GGG + Chr4:81487941-81487960 MsG0480023151.01.T01:intron 45.0%
TCGAAAAAGGTTGTCCTTGG+TGG - Chr4:81486983-81487002 None:intergenic 45.0%
TCGTCGAAAAAGGTTGTCCT+TGG - Chr4:81486986-81487005 None:intergenic 45.0%
TGTCTGCGATGTGCTCTTTA+GGG + Chr4:81486666-81486685 MsG0480023151.01.T01:CDS 45.0%
TTTGCCAGGGACACAAAAGA+AGG + Chr4:81490103-81490122 MsG0480023151.01.T01:intron 45.0%
! AAGGAGAGCGATGATGATGA+TGG - Chr4:81488174-81488193 None:intergenic 45.0%
! AGGGGAACTTAGGCTTTTAC+TGG + Chr4:81486754-81486773 MsG0480023151.01.T01:CDS 45.0%
! ATAAACGGAGGTGCAAACCA+TGG - Chr4:81489640-81489659 None:intergenic 45.0%
! GCTACCTTCCTTTTGGCATA+AGG + Chr4:81486903-81486922 MsG0480023151.01.T01:intron 45.0%
! GCTCTTTTGGACCGATGTTT+GGG + Chr4:81486574-81486593 MsG0480023151.01.T01:CDS 45.0%
! TAAACGGAGGTGCAAACCAT+GGG - Chr4:81489639-81489658 None:intergenic 45.0%
! TATTGACTGCAAGCCAACTG+TGG + Chr4:81489710-81489729 MsG0480023151.01.T01:intron 45.0%
! TCACGGCCACTTCTCAATTT+TGG - Chr4:81487796-81487815 None:intergenic 45.0%
! TTTTGGACCGATGTTTGGGT+GGG + Chr4:81486578-81486597 MsG0480023151.01.T01:CDS 45.0%
!! TGAAGATGGTGTTGTTTGCG+TGG + Chr4:81486935-81486954 MsG0480023151.01.T01:intron 45.0%
!!! CCACTTCTCAATTTTGGAGC+TGG - Chr4:81487790-81487809 None:intergenic 45.0%
!!! GGTGGTAGTTTTGGACTTGT+CGG - Chr4:81488359-81488378 None:intergenic 45.0%
!!! AGTTTTTTATTTTAATAAAT+AGG - Chr4:81490066-81490085 None:intergenic 5.0%
!!! GTTTTTTATTTTAATAAATA+GGG - Chr4:81490065-81490084 None:intergenic 5.0%
AAGAACCCTCATGTCAGAGG+TGG - Chr4:81490508-81490527 None:intergenic 50.0%
ACCCCAGTTAAACTCAGGAC+AGG - Chr4:81487945-81487964 None:intergenic 50.0%
ACGTAGGTTGTTTGCTTGGG+AGG + Chr4:81486721-81486740 MsG0480023151.01.T01:CDS 50.0%
ACTAAAGCTCCCACATACGC+AGG + Chr4:81489762-81489781 MsG0480023151.01.T01:intron 50.0%
AGAACTCCACCTCTGACATG+AGG + Chr4:81490499-81490518 MsG0480023151.01.T01:three_prime_UTR 50.0%
AGCTGGACCGCAATATCAAG+AGG - Chr4:81486886-81486905 None:intergenic 50.0%
AGTGATACCGATGACCGCTA+AGG - Chr4:81490227-81490246 None:intergenic 50.0%
ATGGATCTGTTGTTCGGGTG+CGG - Chr4:81488155-81488174 None:intergenic 50.0%
ATGTAGGTACCAGGTACCTG+AGG - Chr4:81488233-81488252 None:intergenic 50.0%
CAGTACACCAGTTGGCACAA+AGG + Chr4:81487822-81487841 MsG0480023151.01.T01:intron 50.0%
CCAGGAAAAAACAGCTGCAG+GGG - Chr4:81488680-81488699 None:intergenic 50.0%
CCAGTTAAACTCAGGACAGG+AGG - Chr4:81487942-81487961 None:intergenic 50.0%
CCTCCTGTCCTGAGTTTAAC+TGG + Chr4:81487939-81487958 MsG0480023151.01.T01:intron 50.0%
CTAAAGCTCCCACATACGCA+GGG + Chr4:81489763-81489782 MsG0480023151.01.T01:intron 50.0%
GAACTCCACCTCTGACATGA+GGG + Chr4:81490500-81490519 MsG0480023151.01.T01:three_prime_UTR 50.0%
GCAAAGAACCCTCATGTCAG+AGG - Chr4:81490511-81490530 None:intergenic 50.0%
GGAGACGTAGGTTGTTTGCT+TGG + Chr4:81486717-81486736 MsG0480023151.01.T01:CDS 50.0%
GGTGATTGTAGCTCCTCATG+AGG + Chr4:81489980-81489999 MsG0480023151.01.T01:CDS 50.0%
GTCAGCATTCTTGGCACTTC+TGG + Chr4:81488914-81488933 MsG0480023151.01.T01:intron 50.0%
GTGTCTGCGATGTGCTCTTT+AGG + Chr4:81486665-81486684 MsG0480023151.01.T01:CDS 50.0%
GTTTCCACCTTAGCGGTCAT+CGG + Chr4:81490217-81490236 MsG0480023151.01.T01:CDS 50.0%
TACCAGGTACCTGAGGCATA+GGG - Chr4:81488226-81488245 None:intergenic 50.0%
TAGGTTGTTTGCTTGGGAGG+AGG + Chr4:81486724-81486743 MsG0480023151.01.T01:CDS 50.0%
TGGTGTGTGGTCAGCATTCT+TGG + Chr4:81488905-81488924 MsG0480023151.01.T01:intron 50.0%
! ATGTGGGAGCTTTAGTGCAC+CGG - Chr4:81489758-81489777 None:intergenic 50.0%
! ATGTGTAGGAGGGTGTGAGT+TGG + Chr4:81487032-81487051 MsG0480023151.01.T01:intron 50.0%
! CGCTCTTTTGGACCGATGTT+TGG + Chr4:81486573-81486592 MsG0480023151.01.T01:CDS 50.0%
! CTTTTGGACCGATGTTTGGG+TGG + Chr4:81486577-81486596 MsG0480023151.01.T01:CDS 50.0%
! GAAAGGATAGGGAGCGTAAG+AGG - Chr4:81488401-81488420 None:intergenic 50.0%
! GTTAGTCGCTTTGTTGGCGA+CGG + Chr4:81486542-81486561 MsG0480023151.01.T01:CDS 50.0%
!! AGGAGTTGGTAGGGGAACTT+AGG + Chr4:81486744-81486763 MsG0480023151.01.T01:CDS 50.0%
!! TCTTTAGGGTGGGGGATTGA+TGG + Chr4:81486680-81486699 MsG0480023151.01.T01:CDS 50.0%
!! TGCGATGTGCTCTTTAGGGT+GGG + Chr4:81486670-81486689 MsG0480023151.01.T01:CDS 50.0%
!! TTGGTGGTGCTACTAAGACG+AGG + Chr4:81487190-81487209 MsG0480023151.01.T01:CDS 50.0%
ACCAGGTACCTGAGGCATAG+GGG - Chr4:81488225-81488244 None:intergenic 55.0%
CACTCCACCCACCCAAACAT+CGG - Chr4:81486588-81486607 None:intergenic 55.0%
CCTGAGGCATAGGGGATTGA+AGG - Chr4:81488217-81488236 None:intergenic 55.0%
CCTTCAATCCCCTATGCCTC+AGG + Chr4:81488214-81488233 MsG0480023151.01.T01:intron 55.0%
GACCAGCACAGTACACCAGT+TGG + Chr4:81487814-81487833 MsG0480023151.01.T01:intron 55.0%
GACGAGGCGATCGATCTTAC+AGG + Chr4:81487206-81487225 MsG0480023151.01.T01:CDS 55.0%
GATACCGATGACCGCTAAGG+TGG - Chr4:81490224-81490243 None:intergenic 55.0%
GGAAGAGGTCCCACCATATG+TGG + Chr4:81489790-81489809 MsG0480023151.01.T01:intron 55.0%
GTACCAGGTACCTGAGGCAT+AGG - Chr4:81488227-81488246 None:intergenic 55.0%
GTAGGGTGACGCACCTATTG+TGG - Chr4:81489387-81489406 None:intergenic 55.0%
GTTTGCTTGGGAGGAGGAGT+TGG + Chr4:81486730-81486749 MsG0480023151.01.T01:CDS 55.0%
TCGGTGGGTAGGTGTATCTG+CGG + Chr4:81487119-81487138 MsG0480023151.01.T01:intron 55.0%
TGCCAACTGGTGTACTGTGC+TGG - Chr4:81487819-81487838 None:intergenic 55.0%
TTAGGGTGGGGGATTGATGG+CGG + Chr4:81486683-81486702 MsG0480023151.01.T01:CDS 55.0%
! CATATGGTGGGACCTCTTCC+CGG - Chr4:81489790-81489809 None:intergenic 55.0%
! CGGTCCAGCTACCTTCCTTT+TGG + Chr4:81486896-81486915 MsG0480023151.01.T01:intron 55.0%
! CTGCGATGTGCTCTTTAGGG+TGG + Chr4:81486669-81486688 MsG0480023151.01.T01:CDS 55.0%
! CTGGTGTACTGTGCTGGTCA+CGG - Chr4:81487813-81487832 None:intergenic 55.0%
! GATTGAAGGTGCGAGTGCGA+GGG - Chr4:81488203-81488222 None:intergenic 55.0%
! GCTAGGAGGACCTTTTGTCG+TGG + Chr4:81487531-81487550 MsG0480023151.01.T01:intron 55.0%
! GGCACCTTCTTTTGTGTCCC+TGG - Chr4:81490110-81490129 None:intergenic 55.0%
! GTATTTTGCGTGAGGAGGGG+TGG + Chr4:81486507-81486526 MsG0480023151.01.T01:CDS 55.0%
! TGTAGGAGGGTGTGAGTTGG+TGG + Chr4:81487035-81487054 MsG0480023151.01.T01:intron 55.0%
! TGTGGGAGCTTTAGTGCACC+GGG - Chr4:81489757-81489776 None:intergenic 55.0%
!! CGATGTGCTCTTTAGGGTGG+GGG + Chr4:81486672-81486691 MsG0480023151.01.T01:CDS 55.0%
!! CTTGGGAGGAGGAGTTGGTA+GGG + Chr4:81486735-81486754 MsG0480023151.01.T01:CDS 55.0%
!! GAGCTTGGTCTTGGAGACGT+AGG + Chr4:81486705-81486724 MsG0480023151.01.T01:CDS 55.0%
!! GCGATGTGCTCTTTAGGGTG+GGG + Chr4:81486671-81486690 MsG0480023151.01.T01:CDS 55.0%
!! TTGATGGCGGAGCTTGGTCT+TGG + Chr4:81486696-81486715 MsG0480023151.01.T01:CDS 55.0%
!! TTGGGAGGAGGAGTTGGTAG+GGG + Chr4:81486736-81486755 MsG0480023151.01.T01:CDS 55.0%
!!! CCCCTGCAGCTGTTTTTTCC+TGG + Chr4:81488677-81488696 MsG0480023151.01.T01:intron 55.0%
ACGTGGCCCTTTGTGCCAAC+TGG - Chr4:81487832-81487851 None:intergenic 60.0%
AGTGACGCGTGTGCGATCGT+AGG + Chr4:81487874-81487893 MsG0480023151.01.T01:intron 60.0%
CTGTTGTTCGGGTGCGGTTG+AGG - Chr4:81488149-81488168 None:intergenic 60.0%
TCCCCTATGCCTCAGGTACC+TGG + Chr4:81488221-81488240 MsG0480023151.01.T01:intron 60.0%
TGGACCGATGTTTGGGTGGG+TGG + Chr4:81486581-81486600 MsG0480023151.01.T01:CDS 60.0%
TTCCCGGACCCTGCGTATGT+GGG - Chr4:81489774-81489793 None:intergenic 60.0%
! GCTTGGGAGGAGGAGTTGGT+AGG + Chr4:81486734-81486753 MsG0480023151.01.T01:CDS 60.0%
! GGATTGAAGGTGCGAGTGCG+AGG - Chr4:81488204-81488223 None:intergenic 60.0%
!! GGGTGGGTGGAGTGTCGTTA+CGG + Chr4:81486594-81486613 MsG0480023151.01.T01:CDS 60.0%
!! GGTGGGTGGAGTGTCGTTAC+GGG + Chr4:81486595-81486614 MsG0480023151.01.T01:CDS 60.0%
CATACGCAGGGTCCGGGAAG+AGG + Chr4:81489775-81489794 MsG0480023151.01.T01:intron 65.0%
CTCCCACATACGCAGGGTCC+GGG + Chr4:81489769-81489788 MsG0480023151.01.T01:intron 65.0%
CTTCCCGGACCCTGCGTATG+TGG - Chr4:81489775-81489794 None:intergenic 65.0%
GCGAGTGCGAGGGTGAGAGA+AGG - Chr4:81488193-81488212 None:intergenic 65.0%
GCTCCCACATACGCAGGGTC+CGG + Chr4:81489768-81489787 MsG0480023151.01.T01:intron 65.0%
!! GGGGGATTGATGGCGGAGCT+TGG + Chr4:81486690-81486709 MsG0480023151.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 81486488 81490578 81486488 ID=MsG0480023151.01;Name=MsG0480023151.01
Chr4 mRNA 81486488 81490578 81486488 ID=MsG0480023151.01.T01;Parent=MsG0480023151.01;Name=MsG0480023151.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0.25|0.4|1|0.75|0.8|5|305|257
Chr4 exon 81486488 81486854 81486488 ID=MsG0480023151.01.T01:exon:5521;Parent=MsG0480023151.01.T01
Chr4 exon 81487130 81487227 81487130 ID=MsG0480023151.01.T01:exon:5522;Parent=MsG0480023151.01.T01
Chr4 exon 81487307 81487382 81487307 ID=MsG0480023151.01.T01:exon:5523;Parent=MsG0480023151.01.T01
Chr4 exon 81489946 81490015 81489946 ID=MsG0480023151.01.T01:exon:5524;Parent=MsG0480023151.01.T01
Chr4 exon 81490111 81490578 81490111 ID=MsG0480023151.01.T01:exon:5525;Parent=MsG0480023151.01.T01
Chr4 CDS 81486488 81486854 81486488 ID=MsG0480023151.01.T01:cds;Parent=MsG0480023151.01.T01
Chr4 CDS 81487130 81487227 81487130 ID=MsG0480023151.01.T01:cds;Parent=MsG0480023151.01.T01
Chr4 CDS 81487307 81487382 81487307 ID=MsG0480023151.01.T01:cds;Parent=MsG0480023151.01.T01
Chr4 CDS 81489946 81490015 81489946 ID=MsG0480023151.01.T01:cds;Parent=MsG0480023151.01.T01
Chr4 CDS 81490111 81490273 81490111 ID=MsG0480023151.01.T01:cds;Parent=MsG0480023151.01.T01
Chr4 three_prime_UTR 81490274 81490578 81490274 ID=MsG0480023151.01.T01:three_prime_utr;Parent=MsG0480023151.01.T01
Gene Sequence

>MsG0480023151.01.T01

ATGTGGAGGAGGGACATTTGTATTTTGCGTGAGGAGGGGTGGTTTAATAGTCATGTTAGTCGCTTTGTTGGCGACGGTAAAAATACGCTCTTTTGGACCGATGTTTGGGTGGGTGGAGTGTCGTTACGGGATATGTTTAATAGATTATATGATTTGTCGATGTTGAAGGGGGAGTCAGTGTCTGCGATGTGCTCTTTAGGGTGGGGGATTGATGGCGGAGCTTGGTCTTGGAGACGTAGGTTGTTTGCTTGGGAGGAGGAGTTGGTAGGGGAACTTAGGCTTTTACTGGAAAATGTTACTTTGCAGGTTACTAGGGAAGATAAATGGTTGTGGAGTTTGGATTCATCTTCCATTTATACTGTTCGTAGTGTATCTGCGGTCATGCCTGCTACTGTGATAGATCATTTGGTTATTCAATTTAGTCATATTGGTGGTGCTACTAAGACGAGGCGATCGATCTTACAGGTGGTGGACAAGATCAAGTCAGTAACCTTTAGGTGGTTGAAGGTGAAACTCGCTTCACTTCCCTTCAATTATCATGGTGAACTTGAGTTGCCATTTATAGCGTTACTCTTGGTGATTGTAGCTCCTCATGAGGCTGTGAGATTAAGGGACACAAAAGAAGGTGCCGTGATTTCTTTATTGATTGCGGTGTATTTGGCTTTTCAACATTTCTCAAGAACAAGCTTGGAGAAATCATTTGACCAAGGTTCAATTGTTTCCACCTTAGCGGTCATCGGTATCACTGTTGCATCCTTGTTGCTTCTCATCTGA
Protein sequence

>MsG0480023151.01.T01

MWRRDICILREEGWFNSHVSRFVGDGKNTLFWTDVWVGGVSLRDMFNRLYDLSMLKGESVSAMCSLGWGIDGGAWSWRRRLFAWEEELVGELRLLLENVTLQVTREDKWLWSLDSSSIYTVRSVSAVMPATVIDHLVIQFSHIGGATKTRRSILQVVDKIKSVTFRWLKVKLASLPFNYHGELELPFIALLLVIVAPHEAVRLRDTKEGAVISLLIAVYLAFQHFSRTSLEKSFDQGSIVSTLAVIGITVASLLLLI*