AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039510.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039510.01.T01 MTR_7g075540 96.117 103 4 0 1 103 401 503 8.90e-69 214
MsG0780039510.01.T01 MTR_7g075600 85.859 99 14 0 1 99 403 501 3.02e-59 189
MsG0780039510.01.T01 MTR_7g075610 83.838 99 16 0 1 99 404 502 6.17e-57 183
MsG0780039510.01.T01 MTR_7g075580 83.838 99 16 0 1 99 403 501 2.59e-55 179
MsG0780039510.01.T01 MTR_7g075390 79.798 99 20 0 1 99 405 503 1.09e-54 177
MsG0780039510.01.T01 MTR_7g075570 66.000 100 20 1 1 100 137 222 1.50e-42 139
MsG0780039510.01.T01 MTR_1g103680 56.842 95 41 0 1 95 399 493 6.08e-36 127
MsG0780039510.01.T01 MTR_8g046240 52.632 95 45 0 1 95 407 501 2.94e-34 123
MsG0780039510.01.T01 MTR_5g056720 58.947 95 37 1 1 95 328 420 3.28e-34 122
MsG0780039510.01.T01 MTR_8g046210 52.632 95 45 0 1 95 407 501 5.14e-34 122
MsG0780039510.01.T01 MTR_1g031700 51.613 93 45 0 3 95 400 492 1.34e-33 121
MsG0780039510.01.T01 MTR_4g078110 52.000 100 48 0 1 100 378 477 1.69e-33 120
MsG0780039510.01.T01 MTR_5g007450 50.485 103 50 1 1 102 398 500 5.66e-33 119
MsG0780039510.01.T01 MTR_1g103670 52.688 93 44 0 3 95 400 492 6.61e-33 119
MsG0780039510.01.T01 MTR_1g037370 53.684 95 44 0 1 95 395 489 8.84e-33 119
MsG0780039510.01.T01 MTR_1g116890 53.125 96 44 1 1 95 407 502 1.60e-32 118
MsG0780039510.01.T01 MTR_1g097240 48.000 100 52 0 1 100 397 496 3.34e-32 117
MsG0780039510.01.T01 MTR_5g007550 48.544 103 52 1 1 102 398 500 1.79e-31 115
MsG0780039510.01.T01 MTR_3g024520 52.525 99 43 1 1 95 403 501 3.62e-31 114
MsG0780039510.01.T01 MTR_5g007460 48.544 103 52 1 1 102 377 479 5.82e-31 114
MsG0780039510.01.T01 MTR_3g025230 52.525 99 43 1 1 95 403 501 6.69e-31 114
MsG0780039510.01.T01 MTR_6g462640 49.474 95 48 0 1 95 402 496 9.98e-31 113
MsG0780039510.01.T01 MTR_7g103450 50.515 97 42 2 1 93 416 510 1.14e-30 113
MsG0780039510.01.T01 MTR_3g058220 51.613 93 45 0 1 93 402 494 1.21e-30 113
MsG0780039510.01.T01 MTR_3g025250 50.505 99 45 1 1 95 173 271 2.47e-30 109
MsG0780039510.01.T01 MTR_4g026030 52.577 97 46 0 1 97 245 341 2.83e-30 110
MsG0780039510.01.T01 MTR_8g020940 51.579 95 46 0 1 95 405 499 9.12e-30 110
MsG0780039510.01.T01 MTR_4g026080 50.538 93 46 0 1 93 101 193 1.16e-29 105
MsG0780039510.01.T01 MTR_3g058390 48.387 93 48 0 1 93 402 494 2.02e-29 109
MsG0780039510.01.T01 MTR_4g025940 54.217 83 38 0 4 86 78 160 3.43e-29 103
MsG0780039510.01.T01 MTR_1g442730 48.485 99 51 0 1 99 401 499 3.94e-29 108
MsG0780039510.01.T01 MTR_3g058400 49.462 93 47 0 1 93 403 495 5.33e-29 108
MsG0780039510.01.T01 MTR_8g020950 49.474 95 48 0 1 95 407 501 1.10e-28 107
MsG0780039510.01.T01 MTR_3g025260 50.505 99 45 1 1 95 403 501 1.11e-28 107
MsG0780039510.01.T01 MTR_1g035190 47.475 99 52 0 1 99 387 485 1.49e-28 107
MsG0780039510.01.T01 MTR_0059s0170 50.538 93 46 0 1 93 403 495 1.70e-28 107
MsG0780039510.01.T01 MTR_1g035140 48.980 98 50 0 1 98 401 498 1.78e-28 107
MsG0780039510.01.T01 MTR_0554s0020 48.421 95 49 0 1 95 403 497 2.12e-28 107
MsG0780039510.01.T01 MTR_3g058250 47.312 93 49 0 1 93 402 494 2.70e-28 106
MsG0780039510.01.T01 MTR_5g094500 47.312 93 49 0 1 93 38 130 3.74e-28 99.8
MsG0780039510.01.T01 MTR_3g058240 46.237 93 50 0 1 93 368 460 3.93e-28 106
MsG0780039510.01.T01 MTR_5g045770 56.627 83 36 0 4 86 400 482 4.43e-28 106
MsG0780039510.01.T01 MTR_3g058380 48.387 93 48 0 1 93 322 414 1.02e-27 104
MsG0780039510.01.T01 MTR_4g026050 49.485 97 49 0 1 97 397 493 1.36e-27 104
MsG0780039510.01.T01 MTR_3g058210 46.237 93 50 0 1 93 404 496 2.04e-27 104
MsG0780039510.01.T01 MTR_4g109470 47.423 97 47 1 1 93 400 496 2.05e-27 104
MsG0780039510.01.T01 MTR_3g057910 45.161 93 51 0 1 93 404 496 2.40e-27 104
MsG0780039510.01.T01 MTR_4g026200 50.538 93 46 0 1 93 397 489 4.71e-27 103
MsG0780039510.01.T01 MTR_7g012860 53.571 84 39 0 3 86 403 486 4.75e-27 103
MsG0780039510.01.T01 MTR_0287s0060 53.571 84 39 0 3 86 403 486 4.75e-27 103
MsG0780039510.01.T01 MTR_3g058000 45.455 99 54 0 1 99 406 504 6.06e-27 103
MsG0780039510.01.T01 MTR_2g073480 56.338 71 31 0 1 71 314 384 6.36e-27 102
MsG0780039510.01.T01 MTR_2g073440 56.338 71 31 0 1 71 381 451 9.35e-27 102
MsG0780039510.01.T01 MTR_7g012330 51.190 84 41 0 3 86 402 485 1.21e-26 102
MsG0780039510.01.T01 MTR_3g058110 44.944 89 49 0 1 89 406 494 1.31e-26 102
MsG0780039510.01.T01 MTR_3g058060 48.315 89 46 0 1 89 405 493 1.52e-26 102
MsG0780039510.01.T01 MTR_6g084900 45.000 100 54 1 1 99 167 266 3.55e-26 98.2
MsG0780039510.01.T01 MTR_4g089055 46.939 98 52 0 1 98 416 513 3.98e-26 100
MsG0780039510.01.T01 MTR_6g084770 44.444 99 54 1 1 98 405 503 5.55e-26 100
MsG0780039510.01.T01 MTR_3g076530 46.392 97 52 0 1 97 404 500 6.28e-26 100
MsG0780039510.01.T01 MTR_4g025970 53.012 83 39 0 4 86 401 483 6.65e-26 100
MsG0780039510.01.T01 MTR_3g058230 45.161 93 46 1 1 93 329 416 6.97e-26 99.8
MsG0780039510.01.T01 MTR_5g094520 46.237 93 50 0 1 93 327 419 9.10e-26 99.4
MsG0780039510.01.T01 MTR_5g072980 45.263 95 52 0 3 97 405 499 1.20e-25 99.4
MsG0780039510.01.T01 MTR_5g072930 45.263 95 52 0 3 97 405 499 1.20e-25 99.4
MsG0780039510.01.T01 MTR_3g057980 45.161 93 51 0 1 93 397 489 1.20e-25 99.4
MsG0780039510.01.T01 MTR_5g095260 47.368 95 50 0 1 95 402 496 1.23e-25 99.4
MsG0780039510.01.T01 MTR_5g073320 46.237 93 50 0 1 93 402 494 1.35e-25 99.4
MsG0780039510.01.T01 MTR_4g089025 45.918 98 53 0 1 98 419 516 1.71e-25 99.0
MsG0780039510.01.T01 MTR_2g010530 47.191 89 47 0 1 89 395 483 1.85e-25 99.0
MsG0780039510.01.T01 MTR_1g055325 53.521 71 33 0 1 71 419 489 2.03e-25 99.0
MsG0780039510.01.T01 MTR_5g095290 46.316 95 51 0 1 95 401 495 2.08e-25 98.6
MsG0780039510.01.T01 MTR_2g073420 56.338 71 31 0 1 71 409 479 2.35e-25 98.6
MsG0780039510.01.T01 MTR_5g094520 46.237 93 50 0 1 93 432 524 2.56e-25 98.6
MsG0780039510.01.T01 MTR_5g094510 42.424 99 57 0 1 99 141 239 2.89e-25 95.5
MsG0780039510.01.T01 MTR_6g008640 48.936 94 43 2 4 95 425 515 2.97e-25 98.6
MsG0780039510.01.T01 MTR_5g094540 47.191 89 47 0 1 89 401 489 4.08e-25 97.8
MsG0780039510.01.T01 MTR_5g094570 46.067 89 48 0 1 89 401 489 4.55e-25 97.8
MsG0780039510.01.T01 MTR_5g070710 46.809 94 49 1 1 93 401 494 4.64e-25 97.8
MsG0780039510.01.T01 MTR_5g070920 46.809 94 49 1 1 93 403 496 4.67e-25 97.8
MsG0780039510.01.T01 MTR_4g104570 45.098 102 54 1 1 102 101 200 4.72e-25 93.6
MsG0780039510.01.T01 MTR_1g107300 46.465 99 47 2 1 93 102 200 5.13e-25 94.0
MsG0780039510.01.T01 MTR_5g094660 46.237 93 50 0 1 93 400 492 7.02e-25 97.4
MsG0780039510.01.T01 MTR_5g073250 44.086 93 52 0 1 93 401 493 7.93e-25 97.1
MsG0780039510.01.T01 MTR_5g073230 44.086 93 52 0 1 93 390 482 9.41e-25 97.1
MsG0780039510.01.T01 MTR_4g025980 55.128 78 35 0 3 80 399 476 9.71e-25 97.1
MsG0780039510.01.T01 MTR_5g073020 47.253 91 48 0 3 93 405 495 1.23e-24 96.7
MsG0780039510.01.T01 MTR_8g020960 46.875 96 50 1 1 95 406 501 1.44e-24 96.3
MsG0780039510.01.T01 MTR_4g089030 44.898 98 54 0 1 98 418 515 1.79e-24 96.3
MsG0780039510.01.T01 MTR_8g091690 44.792 96 53 0 3 98 377 472 1.98e-24 95.9
MsG0780039510.01.T01 MTR_4g089020 44.898 98 54 0 1 98 394 491 2.06e-24 95.9
MsG0780039510.01.T01 MTR_5g023680 48.810 84 43 0 3 86 375 458 2.28e-24 95.9
MsG0780039510.01.T01 MTR_6g035115 45.263 95 52 0 1 95 398 492 2.56e-24 95.9
MsG0780039510.01.T01 MTR_5g070850 46.809 94 49 1 1 93 404 497 3.01e-24 95.5
MsG0780039510.01.T01 MTR_5g018990 47.191 89 47 0 1 89 405 493 3.21e-24 95.5
MsG0780039510.01.T01 MTR_4g104610 48.980 98 47 2 1 98 402 496 3.25e-24 95.5
MsG0780039510.01.T01 MTR_3g057900 42.553 94 53 1 1 93 397 490 4.03e-24 95.1
MsG0780039510.01.T01 MTR_4g104540 45.098 102 54 1 1 102 332 431 4.29e-24 94.7
MsG0780039510.01.T01 MTR_8g104100 42.308 104 59 1 1 103 161 264 4.32e-24 92.4
MsG0780039510.01.T01 MTR_5g094460 44.086 93 52 0 1 93 284 376 4.63e-24 94.0
MsG0780039510.01.T01 MTR_3g436390 45.545 101 49 2 1 98 400 497 4.76e-24 95.1
MsG0780039510.01.T01 MTR_5g070690 45.745 94 50 1 1 93 402 495 5.21e-24 94.7
MsG0780039510.01.T01 MTR_5g070800 45.745 94 50 1 1 93 402 495 5.21e-24 94.7
MsG0780039510.01.T01 MTR_5g070700 45.263 95 51 1 1 94 404 498 5.38e-24 94.7
MsG0780039510.01.T01 MTR_3g436540 47.917 96 45 2 1 93 407 500 5.59e-24 94.7
MsG0780039510.01.T01 MTR_5g070973 42.553 94 53 1 1 93 75 168 7.10e-24 90.1
MsG0780039510.01.T01 MTR_1g090987 46.753 77 41 0 7 83 90 166 7.50e-24 89.7
MsG0780039510.01.T01 MTR_4g088420 43.000 100 52 2 1 98 131 227 8.27e-24 91.3
MsG0780039510.01.T01 MTR_4g102310 43.956 91 48 1 3 93 408 495 8.70e-24 94.4
MsG0780039510.01.T01 MTR_6g008650 47.872 94 44 2 4 95 427 517 8.82e-24 94.4
MsG0780039510.01.T01 MTR_1g107295 46.465 99 47 2 1 93 414 512 1.01e-23 94.0
MsG0780039510.01.T01 MTR_8g104030 42.308 104 59 1 1 103 180 283 1.01e-23 92.0
MsG0780039510.01.T01 MTR_1g031710 42.105 95 49 2 3 95 210 300 1.08e-23 92.0
MsG0780039510.01.T01 MTR_3g057870 39.175 97 59 0 3 99 141 237 1.33e-23 90.9
MsG0780039510.01.T01 MTR_4g102280 45.055 91 47 1 3 93 414 501 1.42e-23 93.6
MsG0780039510.01.T01 MTR_5g070830 43.434 99 55 1 1 98 514 612 1.74e-23 93.6
MsG0780039510.01.T01 MTR_5g019010 47.191 89 47 0 1 89 404 492 1.89e-23 93.2
MsG0780039510.01.T01 MTR_5g021390 45.745 94 50 1 1 93 413 506 2.20e-23 93.2
MsG0780039510.01.T01 MTR_4g104660 42.857 98 55 1 3 99 416 513 2.48e-23 92.8
MsG0780039510.01.T01 MTR_3g057970 44.681 94 51 1 1 93 391 484 2.67e-23 92.8
MsG0780039510.01.T01 MTR_5g094840 51.948 77 37 0 1 77 407 483 3.38e-23 92.4
MsG0780039510.01.T01 MTR_4g048580 43.011 93 53 0 1 93 401 493 4.99e-23 92.0
MsG0780039510.01.T01 MTR_5g018980 44.086 93 52 0 1 93 407 499 5.73e-23 92.0
MsG0780039510.01.T01 MTR_3g057860 39.175 97 59 0 3 99 405 501 6.25e-23 91.7
MsG0780039510.01.T01 MTR_5g094550 41.414 99 58 0 1 99 401 499 7.48e-23 91.7
MsG0780039510.01.T01 MTR_4g057645 43.956 91 50 1 1 90 34 124 8.60e-23 86.3
MsG0780039510.01.T01 MTR_1g023730 48.052 77 40 0 1 77 412 488 1.18e-22 91.3
MsG0780039510.01.T01 MTR_5g094560 43.011 93 53 0 1 93 401 493 1.39e-22 90.9
MsG0780039510.01.T01 MTR_1g091023 46.753 77 41 0 7 83 402 478 1.68e-22 90.5
MsG0780039510.01.T01 MTR_8g091680 45.055 91 50 0 3 93 354 444 2.45e-22 90.1
MsG0780039510.01.T01 MTR_4g071710 44.681 94 51 1 1 93 413 506 2.87e-22 90.1
MsG0780039510.01.T01 MTR_1g091010 46.753 77 41 0 7 83 401 477 2.94e-22 89.7
MsG0780039510.01.T01 MTR_8g016550 44.048 84 47 0 1 84 73 156 3.10e-22 85.1
MsG0780039510.01.T01 MTR_3g057170 44.048 84 47 0 1 84 84 167 3.55e-22 85.5
MsG0780039510.01.T01 MTR_1g091003 48.649 74 38 0 7 80 402 475 4.64e-22 89.4
MsG0780039510.01.T01 MTR_8g466180 47.297 74 39 0 1 74 402 475 5.51e-22 89.4
MsG0780039510.01.T01 MTR_5g095220 43.158 95 54 0 1 95 371 465 5.68e-22 89.0
MsG0780039510.01.T01 MTR_3g057800 38.144 97 60 0 3 99 402 498 6.13e-22 89.0
MsG0780039510.01.T01 MTR_4g062510 44.118 102 48 2 1 93 413 514 6.53e-22 89.0
MsG0780039510.01.T01 MTR_4g062500 43.137 102 49 2 1 93 409 510 7.52e-22 89.0
MsG0780039510.01.T01 MTR_6g008430 43.617 94 48 3 4 95 420 510 1.38e-21 88.2
MsG0780039510.01.T01 MTR_5g093960 41.000 100 53 2 1 100 111 204 1.77e-21 85.9
MsG0780039510.01.T01 MTR_1g023720 40.000 90 53 1 1 89 412 501 3.19e-21 87.0
MsG0780039510.01.T01 MTR_4g104550 44.444 99 54 1 1 98 393 491 3.22e-21 87.0
MsG0780039510.01.T01 MTR_6g008630 42.553 94 49 2 4 95 337 427 3.26e-21 86.7
MsG0780039510.01.T01 MTR_4g088425 44.000 100 51 2 1 98 403 499 3.30e-21 87.0
MsG0780039510.01.T01 MTR_4g104640 41.667 96 54 1 3 96 420 515 3.44e-21 87.0
MsG0780039510.01.T01 MTR_7g092620 45.263 95 48 2 1 93 405 497 4.02e-21 86.7
MsG0780039510.01.T01 MTR_7g056103 39.216 102 55 2 1 96 403 503 7.54e-21 85.9
MsG0780039510.01.T01 MTR_3g014880 44.681 94 47 2 4 95 428 518 7.68e-21 85.9
MsG0780039510.01.T01 MTR_3g076560 38.947 95 57 1 3 96 418 512 8.38e-21 85.9
MsG0780039510.01.T01 MTR_0022s0290 43.333 90 50 1 1 89 417 506 8.78e-21 85.9
MsG0780039510.01.T01 MTR_6g008530 41.237 97 52 2 1 95 428 521 1.15e-20 85.5
MsG0780039510.01.T01 MTR_0451s0010 43.956 91 51 0 3 93 225 315 1.32e-20 84.3
MsG0780039510.01.T01 MTR_6g042540 42.553 94 49 2 4 95 420 510 1.61e-20 85.1
MsG0780039510.01.T01 MTR_4g088400 41.237 97 52 2 1 95 419 512 2.24e-20 84.7
MsG0780039510.01.T01 MTR_1g023700 44.156 77 43 0 1 77 413 489 3.03e-20 84.3
MsG0780039510.01.T01 MTR_8g468780 43.750 96 48 3 1 93 336 428 7.01e-20 83.2
MsG0780039510.01.T01 MTR_8g080520 42.553 94 50 1 1 94 430 519 9.51e-20 82.8
MsG0780039510.01.T01 MTR_4g018800 43.617 94 48 2 4 95 427 517 1.07e-19 82.8
MsG0780039510.01.T01 MTR_5g070840 40.244 82 48 1 3 83 77 158 1.28e-19 79.0
MsG0780039510.01.T01 MTR_0171s0010 43.750 96 47 3 1 93 409 500 1.66e-19 82.0
MsG0780039510.01.T01 MTR_8g036185 38.614 101 52 1 3 93 411 511 1.72e-19 82.0
MsG0780039510.01.T01 MTR_0638s0020 41.758 91 53 0 3 93 332 422 1.76e-19 82.0
MsG0780039510.01.T01 MTR_2g450040 41.414 99 53 2 1 97 415 510 2.15e-19 82.0
MsG0780039510.01.T01 MTR_5g045250 39.175 97 56 1 4 100 424 517 2.21e-19 81.6
MsG0780039510.01.T01 MTR_0171s0020 42.105 95 50 2 1 93 407 498 2.26e-19 81.6
MsG0780039510.01.T01 MTR_2g065360 41.758 91 53 0 3 93 375 465 2.58e-19 81.6
MsG0780039510.01.T01 MTR_4g088405 41.237 97 52 2 1 95 333 426 5.17e-19 80.5
MsG0780039510.01.T01 MTR_6g008620 41.053 95 49 3 4 95 427 517 8.53e-19 80.1
MsG0780039510.01.T01 MTR_4g133750 40.426 94 51 2 1 89 399 492 1.06e-18 79.7
MsG0780039510.01.T01 MTR_8g076290 42.553 94 53 1 1 93 405 498 1.20e-18 79.7
MsG0780039510.01.T01 MTR_8g469300 44.330 97 46 4 1 93 405 497 1.31e-18 79.7
MsG0780039510.01.T01 MTR_6g042610 40.426 94 51 2 4 95 421 511 1.84e-18 79.3
MsG0780039510.01.T01 MTR_6g008600 37.234 94 54 2 4 95 429 519 3.75e-18 78.2
MsG0780039510.01.T01 MTR_0181s0030 40.625 96 50 3 1 93 401 492 4.46e-18 78.2
MsG0780039510.01.T01 MTR_0408s0010 40.000 90 49 2 8 95 2 88 6.78e-18 72.4
MsG0780039510.01.T01 MTR_8g012590 38.000 100 57 2 1 98 400 496 7.33e-18 77.4
MsG0780039510.01.T01 MTR_6g022450 38.776 98 55 2 3 98 413 507 8.28e-18 77.4
MsG0780039510.01.T01 MTR_6g034965 37.634 93 54 2 1 89 396 488 1.07e-17 77.0
MsG0780039510.01.T01 MTR_6g035100 37.634 93 54 2 1 89 396 488 1.76e-17 76.3
MsG0780039510.01.T01 MTR_5g018500 37.755 98 56 2 3 98 95 189 2.26e-17 73.6
MsG0780039510.01.T01 MTR_1g097220 39.796 98 52 2 4 97 431 525 2.87e-17 75.9
MsG0780039510.01.T01 MTR_8g027040 39.394 99 56 2 1 97 446 542 5.58e-17 75.1
MsG0780039510.01.T01 MTR_4g077210 41.758 91 49 2 3 93 406 492 6.97e-17 74.7
MsG0780039510.01.T01 MTR_4g088160 37.736 106 53 3 1 93 400 505 1.09e-16 74.3
MsG0780039510.01.T01 MTR_4g088195 38.318 107 51 3 1 93 400 505 1.33e-16 73.9
MsG0780039510.01.T01 MTR_3g020780 40.187 107 57 3 1 102 408 512 1.61e-16 73.6
MsG0780039510.01.T01 MTR_6g008500 37.895 95 54 2 3 95 436 527 1.63e-16 73.6
MsG0780039510.01.T01 MTR_7g087520 36.735 98 56 2 1 93 411 507 3.46e-16 72.8
MsG0780039510.01.T01 MTR_3g077460 43.750 64 36 0 3 66 324 387 3.53e-16 72.4
MsG0780039510.01.T01 MTR_4g062530 39.000 100 51 3 4 93 328 427 5.37e-16 72.0
MsG0780039510.01.T01 MTR_4g088170 36.111 108 54 3 1 93 400 507 8.39e-16 71.6
MsG0780039510.01.T01 MTR_2g010320 37.000 100 58 3 1 98 405 501 8.93e-16 71.6
MsG0780039510.01.T01 MTR_7g092600 39.000 100 49 3 3 93 406 502 2.66e-15 70.1
MsG0780039510.01.T01 MTR_8g098565 36.000 100 60 3 1 98 407 504 3.70e-15 69.7
MsG0780039510.01.T01 MTR_1750s0010 57.143 49 21 0 1 49 102 150 5.18e-15 66.6
MsG0780039510.01.T01 MTR_1g492820 44.286 70 34 2 1 66 415 483 5.92e-15 69.3
MsG0780039510.01.T01 MTR_5g026520 32.653 98 59 3 1 94 408 502 8.07e-15 68.9
MsG0780039510.01.T01 MTR_8g063260 35.514 107 58 4 1 98 400 504 9.89e-15 68.6
MsG0780039510.01.T01 MTR_8g063280 33.663 101 62 2 1 98 398 496 1.72e-14 67.8
MsG0780039510.01.T01 MTR_2g010330 37.778 90 53 3 1 88 409 497 2.31e-14 67.4
MsG0780039510.01.T01 MTR_2g010250 38.000 100 57 4 1 98 407 503 2.47e-14 67.4
MsG0780039510.01.T01 MTR_4g094775 34.021 97 56 2 3 99 401 489 2.64e-14 67.4
MsG0780039510.01.T01 MTR_2g010300 37.624 101 56 3 1 98 391 487 2.66e-14 67.4
MsG0780039510.01.T01 MTR_5g016440 38.144 97 54 2 3 99 396 486 2.77e-14 67.4
MsG0780039510.01.T01 MTR_7g027960 34.906 106 55 3 1 93 397 501 3.55e-14 67.0
MsG0780039510.01.T01 MTR_4g095050 37.363 91 49 2 3 93 405 487 3.86e-14 67.0
MsG0780039510.01.T01 MTR_2g010380 35.000 100 60 3 1 98 411 507 4.61e-14 66.6
MsG0780039510.01.T01 MTR_5g034900 34.653 101 61 3 1 99 419 516 6.74e-14 66.2
MsG0780039510.01.T01 MTR_8g012585 36.364 99 55 3 1 95 350 444 7.66e-14 65.9
MsG0780039510.01.T01 MTR_0171s0030 35.789 95 56 2 1 93 319 410 9.60e-14 65.9
MsG0780039510.01.T01 MTR_4g094772 38.043 92 48 3 3 93 392 475 2.62e-13 64.7
MsG0780039510.01.T01 MTR_7g028020 33.962 106 56 3 1 93 397 501 5.52e-13 63.5
MsG0780039510.01.T01 MTR_4g133760 40.244 82 43 1 14 89 296 377 8.29e-13 63.2
MsG0780039510.01.T01 MTR_2g010290 36.000 100 59 3 1 98 434 530 9.09e-13 63.2
MsG0780039510.01.T01 MTR_5g094670 45.763 59 32 0 31 89 197 255 1.45e-12 62.0
MsG0780039510.01.T01 MTR_5g016410 36.264 91 50 2 3 93 401 483 2.32e-12 62.0
MsG0780039510.01.T01 MTR_2g010280 35.644 101 58 4 1 98 405 501 3.11e-12 61.6
MsG0780039510.01.T01 MTR_3g076550 35.354 99 43 3 3 98 391 471 4.26e-12 61.2
MsG0780039510.01.T01 MTR_5g075450 41.791 67 37 1 1 65 404 470 5.97e-12 60.8
MsG0780039510.01.T01 MTR_4g131830 35.211 71 42 2 1 67 406 476 8.00e-12 60.5
MsG0780039510.01.T01 MTR_4g035330 38.043 92 48 3 3 93 389 472 1.53e-11 59.7
MsG0780039510.01.T01 MTR_2g437880 35.354 99 54 3 3 100 406 495 1.72e-11 59.3
MsG0780039510.01.T01 MTR_2g097840 32.941 85 57 0 14 98 46 130 2.48e-11 56.6
MsG0780039510.01.T01 MTR_2g437840 30.526 95 58 2 1 95 399 485 5.43e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039510.01.T01 AT1G33730 58.065 93 39 0 1 93 272 364 1.81e-36 127
MsG0780039510.01.T01 AT1G33730 58.065 93 39 0 1 93 272 364 1.81e-36 127
MsG0780039510.01.T01 AT1G33720 58.065 93 39 0 1 93 276 368 1.90e-36 127
MsG0780039510.01.T01 AT1G33720 58.065 93 39 0 1 93 276 368 1.90e-36 127
MsG0780039510.01.T01 AT1G33720 58.065 93 39 0 1 93 276 368 1.90e-36 127
MsG0780039510.01.T01 AT1G33720 58.065 93 39 0 1 93 301 393 2.97e-36 127
MsG0780039510.01.T01 AT1G33720 58.065 93 39 0 1 93 408 500 1.87e-35 126
MsG0780039510.01.T01 AT3G61040 58.065 93 39 0 1 93 397 489 6.21e-35 124
MsG0780039510.01.T01 AT2G45560 53.763 93 43 0 1 93 408 500 1.29e-34 124
MsG0780039510.01.T01 AT2G45570 54.839 93 42 0 1 93 409 501 4.88e-34 122
MsG0780039510.01.T01 AT2G45550 53.763 93 43 0 1 93 408 500 1.84e-33 120
MsG0780039510.01.T01 AT2G45580 46.237 93 50 0 1 93 255 347 1.97e-29 108
MsG0780039510.01.T01 AT3G44250 48.485 99 51 0 1 99 398 496 3.14e-28 106
MsG0780039510.01.T01 AT2G45580 46.237 93 50 0 1 93 409 501 3.40e-28 106
MsG0780039510.01.T01 AT1G13080 45.263 95 52 0 1 95 284 378 4.97e-28 105
MsG0780039510.01.T01 AT5G07990 48.000 100 48 1 1 96 399 498 6.98e-28 105
MsG0780039510.01.T01 AT1G13080 45.263 95 52 0 1 95 402 496 1.55e-27 104
MsG0780039510.01.T01 AT5G25180 45.161 93 51 0 3 95 396 488 3.26e-27 103
MsG0780039510.01.T01 AT3G26180 40.594 101 60 0 1 101 268 368 3.55e-27 102
MsG0780039510.01.T01 AT5G25130 45.161 93 51 0 3 95 396 488 3.90e-27 103
MsG0780039510.01.T01 AT3G52970 47.368 95 48 2 1 93 412 506 4.43e-27 103
MsG0780039510.01.T01 AT3G52970 47.368 95 48 2 1 93 426 520 5.04e-27 103
MsG0780039510.01.T01 AT3G26200 45.918 98 53 0 1 98 399 496 7.69e-27 102
MsG0780039510.01.T01 AT5G25140 44.086 93 52 0 3 95 396 488 9.59e-27 102
MsG0780039510.01.T01 AT5G57260 47.674 86 45 0 1 86 401 486 1.34e-26 102
MsG0780039510.01.T01 AT3G26180 40.594 101 60 0 1 101 402 502 1.40e-26 102
MsG0780039510.01.T01 AT3G26170 40.594 101 60 0 1 101 402 502 2.17e-26 101
MsG0780039510.01.T01 AT5G25120 43.011 93 53 0 3 95 396 488 2.82e-26 101
MsG0780039510.01.T01 AT3G26300 44.086 93 52 0 1 93 398 490 1.13e-25 99.8
MsG0780039510.01.T01 AT3G26190 45.263 95 52 0 1 95 399 493 1.95e-25 99.0
MsG0780039510.01.T01 AT3G26290 45.161 93 51 0 1 93 398 490 2.27e-25 98.6
MsG0780039510.01.T01 AT3G26290 45.161 93 51 0 1 93 411 503 2.30e-25 98.6
MsG0780039510.01.T01 AT3G26280 45.263 95 50 1 1 95 421 513 2.43e-25 98.6
MsG0780039510.01.T01 AT3G26280 45.263 95 50 1 1 95 404 496 2.62e-25 98.6
MsG0780039510.01.T01 AT3G26230 45.263 95 50 1 1 95 400 492 2.83e-25 98.6
MsG0780039510.01.T01 AT3G53300 44.898 98 54 0 1 98 399 496 3.56e-25 98.2
MsG0780039510.01.T01 AT5G35715 43.878 98 55 0 1 98 337 434 3.75e-25 97.8
MsG0780039510.01.T01 AT4G36220 44.000 100 55 1 1 99 415 514 5.18e-25 97.8
MsG0780039510.01.T01 AT2G02580 44.086 93 52 0 1 93 398 490 5.33e-25 97.8
MsG0780039510.01.T01 AT3G26310 43.011 93 53 0 1 93 397 489 5.61e-25 97.4
MsG0780039510.01.T01 AT3G26270 44.211 95 51 1 1 95 403 495 7.57e-25 97.4
MsG0780039510.01.T01 AT2G40890 45.918 98 53 0 1 98 396 493 1.39e-24 96.7
MsG0780039510.01.T01 AT3G53280 42.857 98 56 0 1 98 397 494 2.75e-24 95.5
MsG0780039510.01.T01 AT3G53290 45.918 98 53 0 1 98 306 403 3.59e-24 94.7
MsG0780039510.01.T01 AT3G26150 41.584 101 59 0 1 101 402 502 3.63e-24 95.5
MsG0780039510.01.T01 AT3G26330 43.820 89 50 0 1 89 398 486 8.54e-24 94.4
MsG0780039510.01.T01 AT3G26320 41.573 89 52 0 1 89 398 486 2.69e-23 92.8
MsG0780039510.01.T01 AT3G26220 41.053 95 54 1 1 95 403 495 3.45e-23 92.4
MsG0780039510.01.T01 AT1G13110 40.000 95 57 0 1 95 404 498 7.56e-23 91.7
MsG0780039510.01.T01 AT4G22710 48.352 91 44 1 3 93 423 510 8.85e-23 91.7
MsG0780039510.01.T01 AT4G22690 48.352 91 44 1 3 93 454 541 8.92e-23 91.7
MsG0780039510.01.T01 AT3G26210 44.444 81 45 0 1 81 401 481 1.23e-22 90.9
MsG0780039510.01.T01 AT4G12310 43.617 94 45 3 3 93 417 505 2.63e-22 90.1
MsG0780039510.01.T01 AT4G12330 41.758 91 50 1 3 93 416 503 6.04e-22 89.0
MsG0780039510.01.T01 AT3G26160 42.000 100 53 2 1 95 402 501 8.39e-22 88.6
MsG0780039510.01.T01 AT5G44620 41.758 91 50 1 3 93 417 504 1.04e-21 88.6
MsG0780039510.01.T01 AT2G24180 39.785 93 51 1 1 93 404 491 2.29e-21 87.4
MsG0780039510.01.T01 AT4G12300 43.617 94 45 3 3 93 413 501 6.20e-21 86.3
MsG0780039510.01.T01 AT3G26830 42.857 84 47 1 1 83 398 481 1.69e-20 85.1
MsG0780039510.01.T01 AT4G12320 41.489 94 47 3 3 93 415 503 1.97e-20 84.7
MsG0780039510.01.T01 AT4G13770 39.583 96 57 1 1 95 399 494 1.97e-20 84.7
MsG0780039510.01.T01 AT5G04330 42.000 100 57 1 1 99 404 503 3.07e-20 84.3
MsG0780039510.01.T01 AT1G13090 40.000 90 54 0 1 90 398 487 8.97e-20 82.8
MsG0780039510.01.T01 AT3G48320 36.000 100 63 1 1 99 389 488 9.06e-20 82.8
MsG0780039510.01.T01 AT1G13100 42.857 77 44 0 1 77 398 474 1.20e-19 82.4
MsG0780039510.01.T01 AT3G25180 43.011 93 50 1 3 95 412 501 1.40e-19 82.4
MsG0780039510.01.T01 AT1G74550 39.394 99 58 1 1 99 383 479 2.05e-19 82.0
MsG0780039510.01.T01 AT3G48310 36.000 100 63 1 1 99 389 488 7.36e-19 80.5
MsG0780039510.01.T01 AT1G11610 39.394 99 59 1 3 100 398 496 1.00e-18 80.1
MsG0780039510.01.T01 AT4G31500 38.614 101 59 2 1 98 396 496 1.01e-18 80.1
MsG0780039510.01.T01 AT4G37430 41.489 94 49 3 3 95 399 487 1.65e-18 79.3
MsG0780039510.01.T01 AT1G13710 36.842 95 56 1 4 98 420 510 1.76e-18 79.3
MsG0780039510.01.T01 AT3G48270 36.634 101 61 2 1 99 388 487 1.99e-18 79.3
MsG0780039510.01.T01 AT3G48280 36.364 99 62 1 1 98 388 486 2.40e-18 79.0
MsG0780039510.01.T01 AT2G30750 40.404 99 58 1 3 100 398 496 3.11e-18 78.6
MsG0780039510.01.T01 AT4G37310 44.211 95 45 3 3 95 407 495 4.26e-18 78.2
MsG0780039510.01.T01 AT3G48300 38.000 100 57 2 1 99 386 481 4.59e-18 78.2
MsG0780039510.01.T01 AT3G48300 38.000 100 57 2 1 99 388 483 4.60e-18 78.2
MsG0780039510.01.T01 AT1G74540 39.362 94 55 1 1 94 389 480 6.79e-18 77.8
MsG0780039510.01.T01 AT4G31950 40.625 96 51 2 3 95 408 500 7.48e-18 77.4
MsG0780039510.01.T01 AT3G53305 41.860 86 45 1 1 86 237 317 1.20e-17 76.3
MsG0780039510.01.T01 AT3G03470 42.529 87 42 3 1 82 407 490 1.82e-17 76.3
MsG0780039510.01.T01 AT3G48290 35.354 99 63 1 1 98 390 488 1.84e-17 76.3
MsG0780039510.01.T01 AT3G48290 35.354 99 63 1 1 98 416 514 1.96e-17 76.3
MsG0780039510.01.T01 AT1G11610 39.773 88 52 1 3 89 398 485 3.65e-17 75.5
MsG0780039510.01.T01 AT1G64940 35.354 99 60 2 1 98 411 506 4.81e-17 75.1
MsG0780039510.01.T01 AT2G25160 37.500 96 55 2 3 96 416 508 6.35e-17 74.7
MsG0780039510.01.T01 AT1G01190 37.864 103 58 2 1 99 435 535 6.82e-17 74.7
MsG0780039510.01.T01 AT1G01190 37.864 103 58 2 1 99 430 530 7.16e-17 74.7
MsG0780039510.01.T01 AT4G31940 38.542 96 53 2 3 95 420 512 8.75e-17 74.3
MsG0780039510.01.T01 AT2G42250 35.354 99 53 2 3 93 408 503 1.53e-16 73.9
MsG0780039510.01.T01 AT1G64950 34.343 99 61 2 1 98 410 505 1.59e-16 73.9
MsG0780039510.01.T01 AT3G61880 37.113 97 55 2 1 93 428 522 1.79e-16 73.6
MsG0780039510.01.T01 AT3G61880 37.113 97 55 2 1 93 428 522 1.99e-16 73.6
MsG0780039510.01.T01 AT4G37360 40.659 91 46 2 3 93 399 481 5.10e-16 72.4
MsG0780039510.01.T01 AT5G24950 35.417 96 61 1 1 95 396 491 1.02e-15 71.6
MsG0780039510.01.T01 AT4G37330 39.362 94 49 2 1 94 394 479 1.05e-15 71.2
MsG0780039510.01.T01 AT2G30770 36.364 99 62 1 3 100 398 496 1.05e-15 71.2
MsG0780039510.01.T01 AT4G37320 37.895 95 51 2 1 95 397 483 1.39e-15 71.2
MsG0780039510.01.T01 AT2G23220 50.000 66 28 1 1 66 412 472 1.56e-15 70.9
MsG0780039510.01.T01 AT4G31970 36.458 96 55 2 3 95 419 511 1.95e-15 70.5
MsG0780039510.01.T01 AT5G61320 33.333 102 62 3 1 99 388 486 2.09e-15 70.5
MsG0780039510.01.T01 AT1G66540 40.659 91 46 2 3 93 227 309 2.54e-15 70.1
MsG0780039510.01.T01 AT5G24960 36.170 94 59 1 3 95 399 492 2.72e-15 70.1
MsG0780039510.01.T01 AT1G66540 40.659 91 46 2 3 93 286 368 4.05e-15 69.7
MsG0780039510.01.T01 AT5G47990 35.052 97 54 2 3 94 409 501 4.71e-15 69.7
MsG0780039510.01.T01 AT5G42580 36.000 100 54 3 1 94 392 487 4.84e-15 69.7
MsG0780039510.01.T01 AT4G37410 39.130 92 52 2 3 94 396 483 4.84e-15 69.7
MsG0780039510.01.T01 AT2G46660 37.113 97 54 2 1 93 428 521 5.02e-15 69.3
MsG0780039510.01.T01 AT5G09970 37.755 98 57 2 4 100 441 535 5.87e-15 69.3
MsG0780039510.01.T01 AT2G12190 34.653 101 60 3 1 98 410 507 6.44e-15 69.3
MsG0780039510.01.T01 AT4G37370 38.462 91 47 2 3 93 398 479 7.64e-15 68.9
MsG0780039510.01.T01 AT1G64930 33.663 101 61 3 1 98 409 506 7.67e-15 68.9
MsG0780039510.01.T01 AT5G04660 44.928 69 35 2 1 66 411 479 1.18e-14 68.6
MsG0780039510.01.T01 AT5G10600 37.363 91 52 2 3 93 414 499 2.20e-14 67.8
MsG0780039510.01.T01 AT5G57220 38.043 92 49 2 3 94 394 477 2.84e-14 67.4
MsG0780039510.01.T01 AT4G13310 34.043 94 61 1 1 93 397 490 2.96e-14 67.4
MsG0780039510.01.T01 AT2G23190 48.485 66 29 1 1 66 441 501 3.02e-14 67.4
MsG0780039510.01.T01 AT3G20140 39.583 96 52 3 1 94 407 498 4.51e-14 66.6
MsG0780039510.01.T01 AT1G64900 33.663 101 61 3 1 98 404 501 5.06e-14 66.6
MsG0780039510.01.T01 AT3G10570 41.429 70 36 2 1 66 412 480 5.64e-14 66.6
MsG0780039510.01.T01 AT3G10560 37.755 98 54 4 1 94 412 506 5.98e-14 66.2
MsG0780039510.01.T01 AT3G28740 37.634 93 49 3 3 94 407 491 1.30e-13 65.5
MsG0780039510.01.T01 AT1G28430 36.364 99 52 3 3 94 407 501 1.50e-13 65.5
MsG0780039510.01.T01 AT4G13290 34.043 94 61 1 1 93 390 483 2.13e-13 64.7
MsG0780039510.01.T01 AT3G20080 37.374 99 52 3 3 95 273 367 2.13e-13 64.7
MsG0780039510.01.T01 AT3G20080 37.374 99 52 3 3 95 273 367 2.13e-13 64.7
MsG0780039510.01.T01 AT3G20080 37.374 99 52 3 3 95 273 367 2.13e-13 64.7
MsG0780039510.01.T01 AT3G20080 37.374 99 52 3 3 95 273 367 2.13e-13 64.7
MsG0780039510.01.T01 AT2G14100 34.653 101 58 3 3 99 410 506 2.25e-13 64.7
MsG0780039510.01.T01 AT3G20120 33.333 99 57 2 1 94 270 364 2.37e-13 64.7
MsG0780039510.01.T01 AT3G20120 33.333 99 57 2 1 94 270 364 2.37e-13 64.7
MsG0780039510.01.T01 AT3G20120 33.333 99 57 2 1 94 270 364 2.37e-13 64.7
MsG0780039510.01.T01 AT3G20120 33.333 99 57 2 1 94 406 500 2.92e-13 64.3
MsG0780039510.01.T01 AT3G20935 35.714 98 53 3 3 94 235 328 3.54e-13 63.9
MsG0780039510.01.T01 AT3G20080 37.374 99 52 3 3 95 410 504 3.59e-13 64.3
MsG0780039510.01.T01 AT3G20080 37.374 99 52 3 3 95 410 504 3.59e-13 64.3
MsG0780039510.01.T01 AT1G50520 34.375 96 54 3 4 94 413 504 3.89e-13 63.9
MsG0780039510.01.T01 AT2G27010 34.343 99 55 3 1 93 383 477 5.81e-13 63.5
MsG0780039510.01.T01 AT4G37340 40.244 82 41 2 3 84 399 472 7.27e-13 63.2
MsG0780039510.01.T01 AT5G36220 36.957 92 50 2 3 94 259 342 7.48e-13 63.2
MsG0780039510.01.T01 AT5G67310 32.653 98 58 2 3 100 410 499 9.38e-13 63.2
MsG0780039510.01.T01 AT5G42590 33.333 99 64 2 3 99 398 496 1.01e-12 62.8
MsG0780039510.01.T01 AT5G10610 35.165 91 54 2 3 93 398 483 1.08e-12 62.8
MsG0780039510.01.T01 AT4G37400 34.694 98 60 2 3 99 394 488 1.09e-12 62.8
MsG0780039510.01.T01 AT5G36220 36.957 92 50 2 3 94 405 488 1.27e-12 62.8
MsG0780039510.01.T01 AT1G11600 40.580 69 36 2 4 67 411 479 1.34e-12 62.4
MsG0780039510.01.T01 AT4G15350 37.000 100 49 4 3 94 403 496 1.51e-12 62.4
MsG0780039510.01.T01 AT3G20940 33.010 103 59 3 3 99 410 508 1.95e-12 62.0
MsG0780039510.01.T01 AT4G15380 34.343 99 55 3 3 95 405 499 2.64e-12 61.6
MsG0780039510.01.T01 AT1G01280 33.333 102 58 2 1 97 404 500 4.00e-12 61.2
MsG0780039510.01.T01 AT3G20090 32.990 97 56 3 3 94 273 365 5.03e-12 60.8
MsG0780039510.01.T01 AT3G20090 32.990 97 56 3 3 94 411 503 6.40e-12 60.5
MsG0780039510.01.T01 AT3G32047 35.366 82 46 2 3 81 408 485 8.20e-12 60.5
MsG0780039510.01.T01 AT4G15330 34.483 87 50 2 1 84 375 457 9.09e-12 60.1
MsG0780039510.01.T01 AT4G15330 34.483 87 50 2 1 84 403 485 1.11e-11 60.1
MsG0780039510.01.T01 AT2G30490 38.806 67 39 1 1 65 403 469 1.28e-11 59.7
MsG0780039510.01.T01 AT1G58260 32.530 83 50 1 1 77 417 499 3.35e-11 58.5
MsG0780039510.01.T01 AT5G04630 39.130 69 39 2 1 66 408 476 3.61e-11 58.5
MsG0780039510.01.T01 AT3G20110 34.066 91 54 2 3 93 406 490 5.07e-11 58.2

Find 28 sgRNAs with CRISPR-Local

Find 35 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCAGGCATGAACATATT+TGG 0.126014 7:+65055254 None:intergenic
AAGAGGTTGGACCCTCTTTA+AGG 0.195843 7:+65055028 None:intergenic
GGAGTGTGACATTAATTATA+AGG 0.271091 7:-65055225 MsG0780039510.01.T01:CDS
ATGAATATGGAGGAGCGATT+TGG 0.283347 7:-65055056 MsG0780039510.01.T01:CDS
TCCATTCAAAGTTGTGTAGA+AGG 0.345311 7:+65055108 None:intergenic
CCCTTCTACACAACTTTGAA+TGG 0.353084 7:-65055109 MsG0780039510.01.T01:CDS
AAAGTCAGAACAAATGAATA+TGG 0.362499 7:-65055069 MsG0780039510.01.T01:CDS
TGAATATGGAGGAGCGATTT+GGG 0.386016 7:-65055055 MsG0780039510.01.T01:CDS
CAAAGGGTATAAGCTCAAAA+TGG 0.421591 7:+65055198 None:intergenic
CAGGGTTGCCATTAGCTCAT+AGG 0.424286 7:-65055154 MsG0780039510.01.T01:CDS
GAGTGTGACATTAATTATAA+GGG 0.436470 7:-65055224 MsG0780039510.01.T01:CDS
TGCACACTCCTATGAGCTAA+TGG 0.445530 7:+65055146 None:intergenic
TGGGAAGAGATCCAACCATT+TGG 0.460907 7:-65055283 MsG0780039510.01.T01:CDS
GAGCTTATACCCTTTGGAGC+TGG 0.500690 7:-65055191 MsG0780039510.01.T01:CDS
GCTGGCAAAAGAATTTGTCC+AGG 0.534722 7:-65055173 MsG0780039510.01.T01:CDS
GATTTGGGTTATCCTTAAAG+AGG 0.556033 7:-65055040 MsG0780039510.01.T01:CDS
TAGCTTGAACTCGAAGAGGT+TGG 0.573885 7:+65055015 None:intergenic
ATTTGGGTTATCCTTAAAGA+GGG 0.578482 7:-65055039 MsG0780039510.01.T01:CDS
TTTGAATGGATACTTGCGGA+TGG 0.578847 7:-65055095 MsG0780039510.01.T01:CDS
CCATTCAAAGTTGTGTAGAA+GGG 0.585707 7:+65055109 None:intergenic
GAAGTAGCTTGAACTCGAAG+AGG 0.591441 7:+65055011 None:intergenic
TTGAATGGATACTTGCGGAT+GGG 0.593650 7:-65055094 MsG0780039510.01.T01:CDS
CTATGAGCTAATGGCAACCC+TGG 0.594504 7:+65055155 None:intergenic
CAAGCTACTTCAATCAAGCA+TGG 0.601980 7:-65054999 MsG0780039510.01.T01:CDS
CAACTTTGAATGGATACTTG+CGG 0.616344 7:-65055099 MsG0780039510.01.T01:CDS
GTCAGAACAAATGAATATGG+AGG 0.629734 7:-65055066 MsG0780039510.01.T01:CDS
CTGGCAAAAGAATTTGTCCA+GGG 0.636733 7:-65055172 MsG0780039510.01.T01:CDS
TAGGAGTGTGCACTTAATCG+TGG 0.666910 7:-65055135 MsG0780039510.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAAGTCAGAACAAATGAATA+TGG - Chr7:65055210-65055229 MsG0780039510.01.T01:CDS 25.0%
! GAGTGTGACATTAATTATAA+GGG - Chr7:65055055-65055074 MsG0780039510.01.T01:CDS 25.0%
!! CATATTTGGATTTTTCCAAA+TGG + Chr7:65055014-65055033 None:intergenic 25.0%
GGAGTGTGACATTAATTATA+AGG - Chr7:65055054-65055073 MsG0780039510.01.T01:CDS 30.0%
! ATTTGGGTTATCCTTAAAGA+GGG - Chr7:65055240-65055259 MsG0780039510.01.T01:CDS 30.0%
! TTTGGATTTTTCCAAATGGT+TGG + Chr7:65055010-65055029 None:intergenic 30.0%
CAACTTTGAATGGATACTTG+CGG - Chr7:65055180-65055199 MsG0780039510.01.T01:CDS 35.0%
CCATTCAAAGTTGTGTAGAA+GGG + Chr7:65055173-65055192 None:intergenic 35.0%
CTTTCAGGCATGAACATATT+TGG + Chr7:65055028-65055047 None:intergenic 35.0%
GTCAGAACAAATGAATATGG+AGG - Chr7:65055213-65055232 MsG0780039510.01.T01:CDS 35.0%
TCACACTCCAAAAATCTTTC+AGG + Chr7:65055043-65055062 None:intergenic 35.0%
TCCATTCAAAGTTGTGTAGA+AGG + Chr7:65055174-65055193 None:intergenic 35.0%
! CAAAGGGTATAAGCTCAAAA+TGG + Chr7:65055084-65055103 None:intergenic 35.0%
! CATTTTGAGCTTATACCCTT+TGG - Chr7:65055082-65055101 MsG0780039510.01.T01:CDS 35.0%
! GATTTGGGTTATCCTTAAAG+AGG - Chr7:65055239-65055258 MsG0780039510.01.T01:CDS 35.0%
! GTTCATGCCTGAAAGATTTT+TGG - Chr7:65055033-65055052 MsG0780039510.01.T01:CDS 35.0%
ATGAATATGGAGGAGCGATT+TGG - Chr7:65055223-65055242 MsG0780039510.01.T01:CDS 40.0%
CAAGCTACTTCAATCAAGCA+TGG - Chr7:65055280-65055299 MsG0780039510.01.T01:CDS 40.0%
CCCTTCTACACAACTTTGAA+TGG - Chr7:65055170-65055189 MsG0780039510.01.T01:CDS 40.0%
CTGGCAAAAGAATTTGTCCA+GGG - Chr7:65055107-65055126 MsG0780039510.01.T01:CDS 40.0%
TGAATATGGAGGAGCGATTT+GGG - Chr7:65055224-65055243 MsG0780039510.01.T01:CDS 40.0%
TTGAATGGATACTTGCGGAT+GGG - Chr7:65055185-65055204 MsG0780039510.01.T01:CDS 40.0%
TTTGAATGGATACTTGCGGA+TGG - Chr7:65055184-65055203 MsG0780039510.01.T01:CDS 40.0%
! AATTCTTTTGCCAGCTCCAA+AGG + Chr7:65055101-65055120 None:intergenic 40.0%
! ATTCTTTTGCCAGCTCCAAA+GGG + Chr7:65055100-65055119 None:intergenic 40.0%
AAGAGGTTGGACCCTCTTTA+AGG + Chr7:65055254-65055273 None:intergenic 45.0%
GAAGTAGCTTGAACTCGAAG+AGG + Chr7:65055271-65055290 None:intergenic 45.0%
GCTGGCAAAAGAATTTGTCC+AGG - Chr7:65055106-65055125 MsG0780039510.01.T01:CDS 45.0%
TAGCTTGAACTCGAAGAGGT+TGG + Chr7:65055267-65055286 None:intergenic 45.0%
TGCACACTCCTATGAGCTAA+TGG + Chr7:65055136-65055155 None:intergenic 45.0%
TGGGAAGAGATCCAACCATT+TGG - Chr7:65054996-65055015 MsG0780039510.01.T01:CDS 45.0%
! TAGGAGTGTGCACTTAATCG+TGG - Chr7:65055144-65055163 MsG0780039510.01.T01:CDS 45.0%
CAGGGTTGCCATTAGCTCAT+AGG - Chr7:65055125-65055144 MsG0780039510.01.T01:CDS 50.0%
CTATGAGCTAATGGCAACCC+TGG + Chr7:65055127-65055146 None:intergenic 50.0%
!! GAGCTTATACCCTTTGGAGC+TGG - Chr7:65055088-65055107 MsG0780039510.01.T01:CDS 50.0%
Chromosome Type Strat End Strand Name
Chr7 gene 65054995 65055306 65054995 ID=MsG0780039510.01;Name=MsG0780039510.01
Chr7 mRNA 65054995 65055306 65054995 ID=MsG0780039510.01.T01;Parent=MsG0780039510.01;Name=MsG0780039510.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|103
Chr7 exon 65054995 65055306 65054995 ID=MsG0780039510.01.T01:exon:10103;Parent=MsG0780039510.01.T01
Chr7 CDS 65054995 65055306 65054995 ID=MsG0780039510.01.T01:cds;Parent=MsG0780039510.01.T01
Gene Sequence

>MsG0780039510.01.T01

ATGGGAAGAGATCCAACCATTTGGAAAAATCCAAATATGTTCATGCCTGAAAGATTTTTGGAGTGTGACATTAATTATAAGGGCAACCATTTTGAGCTTATACCCTTTGGAGCTGGCAAAAGAATTTGTCCAGGGTTGCCATTAGCTCATAGGAGTGTGCACTTAATCGTGGCATCCCTTCTACACAACTTTGAATGGATACTTGCGGATGGGCTAAAGTCAGAACAAATGAATATGGAGGAGCGATTTGGGTTATCCTTAAAGAGGGTCCAACCTCTTCGAGTTCAAGCTACTTCAATCAAGCATGGTTAA

Protein sequence

>MsG0780039510.01.T01

MGRDPTIWKNPNMFMPERFLECDINYKGNHFELIPFGAGKRICPGLPLAHRSVHLIVASLLHNFEWILADGLKSEQMNMEERFGLSLKRVQPLRVQATSIKHG*