Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045917.01.T01 | XP_013457459.1 | 93.627 | 408 | 24 | 1 | 1 | 408 | 1 | 406 | 0 | 723 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045917.01.T01 | Q10058 | 31.91 | 398 | 218 | 14 | 34 | 399 | 1 | 377 | 3.35E-50 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045917.01.T01 | A0A072V059 | 93.627 | 408 | 24 | 1 | 1 | 408 | 1 | 406 | 0.0 | 723 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048900.01 | MsG0880045917.01 | 0.823550 | 1.304232e-53 | 1.126492e-50 |
| MsG0080048992.01 | MsG0880045917.01 | 0.813213 | 2.868117e-51 | 1.861446e-48 |
| MsG0080049016.01 | MsG0880045917.01 | 0.830476 | 2.874730e-55 | 3.031952e-52 |
| MsG0080049018.01 | MsG0880045917.01 | 0.826542 | 2.562045e-54 | 2.409745e-51 |
| MsG0180000502.01 | MsG0880045917.01 | 0.839511 | 1.517000e-57 | 2.099647e-54 |
| MsG0180000786.01 | MsG0880045917.01 | 0.830272 | 3.223798e-55 | 3.380282e-52 |
| MsG0180001615.01 | MsG0880045917.01 | 0.815647 | 8.305275e-52 | 5.759337e-49 |
| MsG0880044453.01 | MsG0880045917.01 | 0.815234 | 1.026153e-51 | 7.034995e-49 |
| MsG0880045261.01 | MsG0880045917.01 | 0.803162 | 3.977015e-49 | 1.984424e-46 |
| MsG0880045917.01 | MsG0880045923.01 | 0.821109 | 4.808622e-53 | 3.876546e-50 |
| MsG0880045917.01 | MsG0880046288.01 | 0.800495 | 1.403337e-48 | 6.543724e-46 |
| MsG0880045917.01 | MsG0880046347.01 | 0.820226 | 7.671297e-53 | 6.034212e-50 |
| MsG0880045917.01 | MsG0880046574.01 | 0.811589 | 6.492648e-51 | 4.034829e-48 |
| MsG0880045917.01 | MsG0880046584.01 | 0.809692 | 1.668878e-50 | 9.865047e-48 |
| MsG0880045917.01 | MsG0880046639.01 | 0.805974 | 1.030142e-49 | 5.525686e-47 |
| MsG0880045917.01 | MsG0880046856.01 | 0.829389 | 5.290055e-55 | 5.406820e-52 |
| MsG0880045917.01 | MsG0880046968.01 | 0.825429 | 4.711532e-54 | 4.293104e-51 |
| MsG0880045917.01 | MsG0880046969.01 | 0.800228 | 1.590615e-48 | 7.366884e-46 |
| MsG0880045917.01 | MsG0880047076.01 | 0.835077 | 2.069942e-56 | 2.503672e-53 |
| MsG0880045917.01 | MsG0880047107.01 | 0.806582 | 7.670099e-50 | 4.178388e-47 |
| MsG0880045917.01 | MsG0880047605.01 | 0.820620 | 6.229223e-53 | 4.953385e-50 |
| MsG0880045917.01 | MsG0880047660.01 | 0.826932 | 2.067371e-54 | 1.966671e-51 |
| MsG0180002982.01 | MsG0880045917.01 | 0.803881 | 2.821299e-49 | 1.434046e-46 |
| MsG0180003268.01 | MsG0880045917.01 | 0.802355 | 5.835303e-49 | 2.852536e-46 |
| MsG0180003503.01 | MsG0880045917.01 | 0.809819 | 1.567011e-50 | 9.293921e-48 |
| MsG0180004978.01 | MsG0880045917.01 | 0.802861 | 4.588722e-49 | 2.272163e-46 |
| MsG0180004987.01 | MsG0880045917.01 | 0.809477 | 1.856469e-50 | 1.091080e-47 |
| MsG0180005516.01 | MsG0880045917.01 | 0.809029 | 2.314957e-50 | 1.344396e-47 |
| MsG0180005991.01 | MsG0880045917.01 | 0.826480 | 2.650283e-54 | 2.488375e-51 |
| MsG0180006063.01 | MsG0880045917.01 | 0.803201 | 3.903713e-49 | 1.949763e-46 |
| MsG0780040319.01 | MsG0880045917.01 | 0.803801 | 2.931628e-49 | 1.487009e-46 |
| MsG0780040350.01 | MsG0880045917.01 | 0.836044 | 1.178740e-56 | 1.467949e-53 |
| MsG0780040413.01 | MsG0880045917.01 | 0.820643 | 6.156148e-53 | 4.898370e-50 |
| MsG0780040437.01 | MsG0880045917.01 | 0.804963 | 1.678158e-49 | 8.771108e-47 |
| MsG0780041218.01 | MsG0880045917.01 | 0.808697 | 2.726861e-50 | 1.569644e-47 |
| MsG0780041617.01 | MsG0880045917.01 | 0.832983 | 6.922343e-56 | 7.864606e-53 |
| MsG0780041618.01 | MsG0880045917.01 | 0.817270 | 3.598433e-52 | 2.608408e-49 |
| MsG0780041640.01 | MsG0880045917.01 | 0.846265 | 2.421104e-59 | 4.143704e-56 |
| MsG0880042021.01 | MsG0880045917.01 | 0.821051 | 4.958678e-53 | 3.991363e-50 |
| MsG0880043515.01 | MsG0880045917.01 | 0.833200 | 6.114581e-56 | 6.991761e-53 |
| MsG0280010905.01 | MsG0880045917.01 | 0.867676 | 1.148111e-65 | 4.042245e-62 |
| MsG0280011189.01 | MsG0880045917.01 | 0.831758 | 1.392271e-55 | 1.525441e-52 |
| MsG0380012931.01 | MsG0880045917.01 | 0.809949 | 1.468997e-50 | 8.742425e-48 |
| MsG0380013501.01 | MsG0880045917.01 | 0.803614 | 3.204513e-49 | 1.617676e-46 |
| MsG0380014890.01 | MsG0880045917.01 | 0.829406 | 5.239990e-55 | 5.358349e-52 |
| MsG0680030875.01 | MsG0880045917.01 | 0.804259 | 2.353581e-49 | 1.207907e-46 |
| MsG0680030878.01 | MsG0880045917.01 | 0.803347 | 3.639979e-49 | 1.824847e-46 |
| MsG0680030879.01 | MsG0880045917.01 | 0.832037 | 1.187798e-55 | 1.312057e-52 |
| MsG0680034724.01 | MsG0880045917.01 | 0.808995 | 2.354687e-50 | 1.366204e-47 |
| MsG0680035612.01 | MsG0880045917.01 | 0.859179 | 4.945329e-63 | 1.294499e-59 |
| MsG0480018983.01 | MsG0880045917.01 | 0.815431 | 9.277678e-52 | 6.395329e-49 |
| MsG0480019693.01 | MsG0880045917.01 | 0.802407 | 5.694118e-49 | 2.787147e-46 |
| MsG0480019974.01 | MsG0880045917.01 | 0.811742 | 6.011801e-51 | 3.751340e-48 |
| MsG0480020072.01 | MsG0880045917.01 | 0.819457 | 1.149649e-52 | 8.852108e-50 |
| MsG0480020393.01 | MsG0880045917.01 | 0.811576 | 6.532724e-51 | 4.058509e-48 |
| MsG0480021420.01 | MsG0880045917.01 | 0.839542 | 1.489246e-57 | 2.062964e-54 |
| MsG0480021474.01 | MsG0880045917.01 | 0.809752 | 1.620180e-50 | 9.592657e-48 |
| MsG0480021999.01 | MsG0880045917.01 | 0.811939 | 5.447906e-51 | 3.417222e-48 |
| MsG0480022002.01 | MsG0880045917.01 | 0.805981 | 1.026692e-49 | 5.508255e-47 |
| MsG0480022626.01 | MsG0880045917.01 | 0.802084 | 6.635022e-49 | 3.221022e-46 |
| MsG0480022805.01 | MsG0880045917.01 | 0.803422 | 3.512154e-49 | 1.764243e-46 |
| MsG0480023006.01 | MsG0880045917.01 | 0.826730 | 2.311460e-54 | 2.185755e-51 |
| MsG0480023056.01 | MsG0880045917.01 | 0.828158 | 1.050453e-54 | 1.035661e-51 |
| MsG0480023151.01 | MsG0880045917.01 | 0.820603 | 6.287582e-53 | 4.997376e-50 |
| MsG0480023344.01 | MsG0880045917.01 | 0.805175 | 1.515542e-49 | 7.964107e-47 |
| MsG0480023371.01 | MsG0880045917.01 | 0.818439 | 1.958642e-52 | 1.466324e-49 |
| MsG0480023469.01 | MsG0880045917.01 | 0.801038 | 1.086935e-48 | 5.139024e-46 |
| MsG0480023505.01 | MsG0880045917.01 | 0.835018 | 2.142034e-56 | 2.586451e-53 |
| MsG0480023708.01 | MsG0880045917.01 | 0.861453 | 1.014837e-63 | 2.873302e-60 |
| MsG0480023850.01 | MsG0880045917.01 | 0.816333 | 5.837346e-52 | 4.124595e-49 |
| MsG0580024665.01 | MsG0880045917.01 | 0.825389 | 4.814708e-54 | 4.382283e-51 |
| MsG0580024666.01 | MsG0880045917.01 | 0.823456 | 1.371475e-53 | 1.181453e-50 |
| MsG0580024673.01 | MsG0880045917.01 | 0.819930 | 8.965889e-53 | 6.995157e-50 |
| MsG0580024763.01 | MsG0880045917.01 | 0.809835 | 1.554646e-50 | 9.224526e-48 |
| MsG0580024768.01 | MsG0880045917.01 | 0.800134 | 1.661975e-48 | 7.679138e-46 |
| MsG0380015129.01 | MsG0880045917.01 | 0.843368 | 1.462888e-58 | 2.283944e-55 |
| MsG0380016130.01 | MsG0880045917.01 | 0.822357 | 2.473661e-53 | 2.065778e-50 |
| MsG0380016492.01 | MsG0880045917.01 | 0.839741 | 1.321515e-57 | 1.841928e-54 |
| MsG0380016542.01 | MsG0880045917.01 | 0.802681 | 4.999963e-49 | 2.464372e-46 |
| MsG0380016762.01 | MsG0880045917.01 | 0.816240 | 6.122340e-52 | 4.314918e-49 |
| MsG0380017056.01 | MsG0880045917.01 | 0.817483 | 3.220789e-52 | 2.348557e-49 |
| MsG0380017353.01 | MsG0880045917.01 | 0.815643 | 8.320396e-52 | 5.769217e-49 |
| MsG0480018088.01 | MsG0880045917.01 | 0.835159 | 1.973107e-56 | 2.392688e-53 |
| MsG0480018089.01 | MsG0880045917.01 | 0.832328 | 1.006629e-55 | 1.121337e-52 |
| MsG0480018324.01 | MsG0880045917.01 | 0.813155 | 2.953713e-51 | 1.913948e-48 |
| MsG0580027098.01 | MsG0880045917.01 | 0.821907 | 3.145438e-53 | 2.593193e-50 |
| MsG0580027099.01 | MsG0880045917.01 | 0.853548 | 2.221908e-61 | 4.818643e-58 |
| MsG0580027254.01 | MsG0880045917.01 | 0.813781 | 2.150879e-51 | 1.417717e-48 |
| MsG0580028101.01 | MsG0880045917.01 | 0.804896 | 1.733476e-49 | 9.045101e-47 |
| MsG0580028853.01 | MsG0880045917.01 | 0.816791 | 4.608952e-52 | 3.297533e-49 |
| MsG0580029032.01 | MsG0880045917.01 | 0.811915 | 5.513713e-51 | 3.456191e-48 |
| MsG0580029706.01 | MsG0880045917.01 | 0.835430 | 1.685604e-56 | 2.060759e-53 |
| MsG0680030441.01 | MsG0880045917.01 | 0.808380 | 3.186296e-50 | 1.819172e-47 |
| MsG0280006531.01 | MsG0880045917.01 | 0.808382 | 3.183477e-50 | 1.817633e-47 |
| MsG0280007600.01 | MsG0880045917.01 | 0.830347 | 3.091576e-55 | 3.248728e-52 |
| MsG0280009434.01 | MsG0880045917.01 | 0.806282 | 8.873152e-50 | 4.796992e-47 |
| MsG0280009542.01 | MsG0880045917.01 | 0.826869 | 2.141190e-54 | 2.032920e-51 |
| MsG0280010461.01 | MsG0880045917.01 | 0.803783 | 2.956661e-49 | 1.499023e-46 |
| MsG0280010523.01 | MsG0880045917.01 | 0.807396 | 5.158510e-50 | 2.870198e-47 |
| MsG0780036424.01 | MsG0880045917.01 | 0.806711 | 7.202465e-50 | 3.936714e-47 |
| MsG0780036425.01 | MsG0880045917.01 | 0.810406 | 1.171238e-50 | 7.053755e-48 |
| MsG0780036584.01 | MsG0880045917.01 | 0.801803 | 7.578428e-49 | 3.652723e-46 |
| MsG0780037915.01 | MsG0880045917.01 | 0.802639 | 5.098742e-49 | 2.510402e-46 |
| MsG0780038416.01 | MsG0880045917.01 | 0.816896 | 4.365533e-52 | 3.132319e-49 |
| MsG0780038834.01 | MsG0880045917.01 | 0.813990 | 1.934975e-51 | 1.282628e-48 |
| MsG0780039508.01 | MsG0880045917.01 | 0.828192 | 1.030500e-54 | 1.016994e-51 |
| MsG0780039510.01 | MsG0880045917.01 | 0.810914 | 9.095946e-51 | 5.553332e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045917.01.T01 | MTR_4g094962 | 93.627 | 408 | 24 | 1 | 1 | 408 | 1 | 406 | 0.0 | 723 |
| MsG0880045917.01.T01 | MTR_8g072720 | 96.341 | 82 | 2 | 1 | 295 | 376 | 21 | 101 | 2.35e-50 | 165 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045917.01.T01 | AT5G67290 | 70.811 | 370 | 102 | 2 | 38 | 405 | 40 | 405 | 0.0 | 529 |
Find 163 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTCAAGGTTTAGAGTTTC+TGG | 0.052251 | 8:-66425939 | MsG0880045917.01.T01:CDS |
| CGTAATAGCATTAGCTTCTT+TGG | 0.192294 | 8:+66425887 | None:intergenic |
| TTAAATTATAAAAGTATTCT+TGG | 0.202996 | 8:+66424429 | None:intergenic |
| GGAAATTGTGATTGGGAAAT+TGG | 0.237880 | 8:-66426081 | MsG0880045917.01.T01:CDS |
| AGTTGATTGGACTTACTAAT+TGG | 0.239804 | 8:-66424274 | MsG0880045917.01.T01:three_prime_UTR |
| GGGCCCTTGGTCTAGTAAAT+TGG | 0.278810 | 8:-66425970 | MsG0880045917.01.T01:CDS |
| GTACTTCTCGAACTTGTTAC+AGG | 0.302335 | 8:+66424397 | None:intergenic |
| CTCACACACTAAATTTGATT+TGG | 0.304835 | 8:+66424301 | None:intergenic |
| TGGGCTCTAAAACAATACTA+TGG | 0.307026 | 8:+66425907 | None:intergenic |
| CGTCAGCTACTTTGCCGTCT+TGG | 0.313573 | 8:-66426220 | MsG0880045917.01.T01:CDS |
| GTTGCTGAGCTTGTACTTGA+TGG | 0.314697 | 8:-66424631 | MsG0880045917.01.T01:CDS |
| GTAATAGCATTAGCTTCTTT+GGG | 0.322290 | 8:+66425888 | None:intergenic |
| TGTAACGGAGGCACCTTTCT+TGG | 0.330519 | 8:+66426472 | None:intergenic |
| GTTTGCGGTGGCGGAGTTAT+CGG | 0.334496 | 8:-66426518 | MsG0880045917.01.T01:CDS |
| GATGATGGTGTGCCGATTAT+AGG | 0.335684 | 8:-66424739 | MsG0880045917.01.T01:CDS |
| ACTTTGCCGTCTTGGATTGA+TGG | 0.340624 | 8:-66426212 | MsG0880045917.01.T01:CDS |
| CCGCAAACAACCACTTTCTT+CGG | 0.343837 | 8:+66426533 | None:intergenic |
| TTTAGTCCTGCTAGATTTGT+TGG | 0.345510 | 8:-66424580 | MsG0880045917.01.T01:CDS |
| TGGATTGATGGGCCGGCCCA+TGG | 0.348270 | 8:-66426200 | MsG0880045917.01.T01:CDS |
| GAGGAATCCACCAGCTTTAC+CGG | 0.353302 | 8:+66426415 | None:intergenic |
| GTTTAGAGTTTCTGGGCTTA+AGG | 0.354081 | 8:-66425931 | MsG0880045917.01.T01:CDS |
| GTAGGCCGAGGGTACACTTC+TGG | 0.354479 | 8:+66425810 | None:intergenic |
| GTGGATTCCTCGCTTTAGAT+TGG | 0.369347 | 8:-66426403 | MsG0880045917.01.T01:CDS |
| CCACCATTGTTGATCTTAAA+CGG | 0.372685 | 8:-66424603 | MsG0880045917.01.T01:CDS |
| CGCAAACAACCACTTTCTTC+GGG | 0.379429 | 8:+66426534 | None:intergenic |
| TCACTTTCTCAAGAGCTTAA+CGG | 0.385115 | 8:-66426326 | MsG0880045917.01.T01:CDS |
| GTGGAAATGCGTATTCTGTT+TGG | 0.389369 | 8:+66426605 | None:intergenic |
| GCTCAAGGTTTAGAGTTTCT+GGG | 0.393881 | 8:-66425938 | MsG0880045917.01.T01:CDS |
| ACCATTGCTTGTGCCGCTTC+CGG | 0.396774 | 8:-66426434 | MsG0880045917.01.T01:CDS |
| CACGAGCGAGGTGTTCCATT+GGG | 0.400060 | 8:+66426369 | None:intergenic |
| CACTTTCTTCGGGTGATCCA+TGG | 0.400502 | 8:+66426544 | None:intergenic |
| AAGAGGGGTCCTTCGATTAG+AGG | 0.409881 | 8:+66425836 | None:intergenic |
| GTGTGTGAGCCTTAGTTGAT+TGG | 0.410635 | 8:-66424287 | MsG0880045917.01.T01:three_prime_UTR |
| GCCCATGGGCCTAAAACAAT+TGG | 0.415627 | 8:-66426185 | MsG0880045917.01.T01:CDS |
| GCCGTCTTGGATTGATGGGC+CGG | 0.417639 | 8:-66426207 | MsG0880045917.01.T01:CDS |
| GGATTGATGGGCCGGCCCAT+GGG | 0.421402 | 8:-66426199 | MsG0880045917.01.T01:CDS |
| AAAGTGGTTGTTTGCGGTGG+CGG | 0.424230 | 8:-66426527 | MsG0880045917.01.T01:CDS |
| CCGATTATAGGAGAGATTCC+TGG | 0.427774 | 8:-66424727 | MsG0880045917.01.T01:CDS |
| TCGTTACCCCGTATCTCCTC+TGG | 0.428366 | 8:+66424862 | None:intergenic |
| GGGTGTTGTGGATGCGGATG+CGG | 0.429173 | 8:-66426006 | MsG0880045917.01.T01:CDS |
| CCAGGAATCTCTCCTATAAT+CGG | 0.432508 | 8:+66424727 | None:intergenic |
| CTTTGCCGTCTTGGATTGAT+GGG | 0.436410 | 8:-66426211 | MsG0880045917.01.T01:CDS |
| TAGCGACGGGACATAGTTGC+TGG | 0.440683 | 8:-66424687 | MsG0880045917.01.T01:CDS |
| ATTCTCAATGGTCCTGCCAC+TGG | 0.441042 | 8:-66424661 | MsG0880045917.01.T01:CDS |
| CTGATGATCCAGAGGAGATA+CGG | 0.442639 | 8:-66424870 | MsG0880045917.01.T01:CDS |
| TTAGTCCTGCTAGATTTGTT+GGG | 0.447933 | 8:-66424579 | MsG0880045917.01.T01:CDS |
| GCTTAGTCACTCTTGGTAGA+TGG | 0.453602 | 8:-66424547 | MsG0880045917.01.T01:exon |
| CGTATCTCCTCTGGATCATC+AGG | 0.456119 | 8:+66424871 | None:intergenic |
| GCAACAGCAGCTCCAGTGGC+AGG | 0.457894 | 8:+66424649 | None:intergenic |
| GAAGTGTACCCTCGGCCTAC+AGG | 0.459094 | 8:-66425807 | MsG0880045917.01.T01:intron |
| TACGGTGTGGAAATTGTGAT+TGG | 0.463322 | 8:-66426089 | MsG0880045917.01.T01:CDS |
| AGACCGTATCAAGCCATCTC+GGG | 0.465287 | 8:-66424807 | MsG0880045917.01.T01:CDS |
| GTTGAATCGGTGGTTCTAGA+AGG | 0.466838 | 8:-66426032 | MsG0880045917.01.T01:CDS |
| CCGAAGAAAGTGGTTGTTTG+CGG | 0.469061 | 8:-66426533 | MsG0880045917.01.T01:CDS |
| TATGATGTATATATAACTGT+TGG | 0.472642 | 8:-66424481 | MsG0880045917.01.T01:three_prime_UTR |
| TCACGAGCGAGGTGTTCCAT+TGG | 0.474056 | 8:+66426368 | None:intergenic |
| TGTGCCGCTTCCGGTAAAGC+TGG | 0.485821 | 8:-66426425 | MsG0880045917.01.T01:CDS |
| AGATTGAACTGAATTGATAG+TGG | 0.491685 | 8:+66426586 | None:intergenic |
| GCTTACTTTCTCGCCAAGAA+AGG | 0.496186 | 8:-66426485 | MsG0880045917.01.T01:CDS |
| TCCACCAGCTTTACCGGAAG+CGG | 0.498128 | 8:+66426421 | None:intergenic |
| CTCGCTTTAGATTGGTGTGA+CGG | 0.499242 | 8:-66426395 | MsG0880045917.01.T01:CDS |
| TCAAGCCATCTCGGGGAAGA+AGG | 0.503074 | 8:-66424799 | MsG0880045917.01.T01:CDS |
| GATTGGGAAATTGGAGAAGT+TGG | 0.503420 | 8:-66426072 | MsG0880045917.01.T01:CDS |
| TCACTCCTTCTTCCCCGAGA+TGG | 0.503688 | 8:+66424794 | None:intergenic |
| CAGGGGAGGTGTATGTGTGT+GGG | 0.503912 | 8:-66424915 | MsG0880045917.01.T01:CDS |
| AATTGGAGTTGTTGAGCTCA+AGG | 0.504811 | 8:-66425953 | MsG0880045917.01.T01:CDS |
| TGTTGAGTCAACAATGGAAA+AGG | 0.507911 | 8:+66424363 | None:intergenic |
| TTAGTAAGTCCAATCAACTA+AGG | 0.508098 | 8:+66424278 | None:intergenic |
| CGATTATAGGAGAGATTCCT+GGG | 0.510562 | 8:-66424726 | MsG0880045917.01.T01:CDS |
| TACCAAGGCTTAGTCACTCT+TGG | 0.511449 | 8:-66424554 | MsG0880045917.01.T01:exon |
| GAGAAGTTGGTGGTGGAAGG+AGG | 0.512798 | 8:-66426059 | MsG0880045917.01.T01:CDS |
| AATGACCATATTATACTAGT+TGG | 0.513748 | 8:-66426720 | None:intergenic |
| TGATGATCCAGAGGAGATAC+GGG | 0.515059 | 8:-66424869 | MsG0880045917.01.T01:CDS |
| TTGGAGAAGTTGGTGGTGGA+AGG | 0.521275 | 8:-66426062 | MsG0880045917.01.T01:CDS |
| AAGACCGTATCAAGCCATCT+CGG | 0.521544 | 8:-66424808 | MsG0880045917.01.T01:CDS |
| CTCAGCAACAGCAGCTCCAG+TGG | 0.525546 | 8:+66424645 | None:intergenic |
| TCAGGGGAGGTGTATGTGTG+TGG | 0.526444 | 8:-66424916 | MsG0880045917.01.T01:intron |
| GTGTCCGTGTAAACATTTGC+GGG | 0.527352 | 8:+66426135 | None:intergenic |
| ACCGGAAGCGGCACAAGCAA+TGG | 0.527375 | 8:+66426433 | None:intergenic |
| GAGAACGCGGTGGAGAAGTA+CGG | 0.529700 | 8:-66426107 | MsG0880045917.01.T01:CDS |
| ACTTTCTTCGGGTGATCCAT+GGG | 0.531163 | 8:+66426545 | None:intergenic |
| TTCCCCGAGATGGCTTGATA+CGG | 0.532681 | 8:+66424804 | None:intergenic |
| ATCGGTGGTTCTAGAAGGTG+GGG | 0.534614 | 8:-66426027 | MsG0880045917.01.T01:CDS |
| GTCACTCTTGGTAGATGGTG+TGG | 0.535643 | 8:-66424542 | MsG0880045917.01.T01:three_prime_UTR |
| GGAGAGATTCCTGGGGTGAA+AGG | 0.540724 | 8:-66424718 | MsG0880045917.01.T01:CDS |
| AATCGGTGGTTCTAGAAGGT+GGG | 0.541985 | 8:-66426028 | MsG0880045917.01.T01:CDS |
| TGGGAAATTGGAGAAGTTGG+TGG | 0.544163 | 8:-66426069 | MsG0880045917.01.T01:CDS |
| GAAATTGGAGAAGTTGGTGG+TGG | 0.545179 | 8:-66426066 | MsG0880045917.01.T01:CDS |
| GGAAGGAGGAAAAGTTGAAT+CGG | 0.546489 | 8:-66426045 | MsG0880045917.01.T01:CDS |
| GCCGCTTCCGGTAAAGCTGG+TGG | 0.546489 | 8:-66426422 | MsG0880045917.01.T01:CDS |
| TGGGATGTCAAAGGAGGAAG+AGG | 0.547600 | 8:-66424896 | MsG0880045917.01.T01:CDS |
| TACCAAGAGTGACTAAGCCT+TGG | 0.547773 | 8:+66424552 | None:intergenic |
| AAGAAAGTGGTTGTTTGCGG+TGG | 0.550857 | 8:-66426530 | MsG0880045917.01.T01:CDS |
| GACCATATTATACTAGTTGG+CGG | 0.551011 | 8:-66426717 | None:intergenic |
| AGTTGCTGGGGTATTCTCAA+TGG | 0.554810 | 8:-66424673 | MsG0880045917.01.T01:CDS |
| GATCGATAACCGTATGATTG+TGG | 0.557749 | 8:+66426302 | None:intergenic |
| AATCAATTGCGATGCTGAAG+AGG | 0.563061 | 8:-66424837 | MsG0880045917.01.T01:CDS |
| AAAGGTTGTTATATAGCGAC+GGG | 0.565958 | 8:-66424700 | MsG0880045917.01.T01:CDS |
| AGCGACGGGACATAGTTGCT+GGG | 0.567430 | 8:-66424686 | MsG0880045917.01.T01:CDS |
| GTACGCCCAACAAATCTAGC+AGG | 0.574585 | 8:+66424574 | None:intergenic |
| GGGCTCTAAAACAATACTAT+GGG | 0.575399 | 8:+66425908 | None:intergenic |
| GATTGAAGCTTTCACGAGCG+AGG | 0.576524 | 8:+66426357 | None:intergenic |
| AGTGTCCGTGTAAACATTTG+CGG | 0.578489 | 8:+66426134 | None:intergenic |
| TTGGTGTGACGGAGGCCCAA+TGG | 0.578735 | 8:-66426384 | MsG0880045917.01.T01:CDS |
| TTGATCCAGAAGTGTACCCT+CGG | 0.583741 | 8:-66425815 | MsG0880045917.01.T01:CDS |
| CATGGATCACCCGAAGAAAG+TGG | 0.588077 | 8:-66426543 | MsG0880045917.01.T01:CDS |
| GAAATGCGTATTCTGTTTGG+AGG | 0.589634 | 8:+66426608 | None:intergenic |
| CGATATTGTTGAGTCAACAA+TGG | 0.590300 | 8:+66424357 | None:intergenic |
| ACAATCATACTTCATGAACT+AGG | 0.591496 | 8:-66424331 | MsG0880045917.01.T01:three_prime_UTR |
| ATCAATTGCGATGCTGAAGA+GGG | 0.593161 | 8:-66424836 | MsG0880045917.01.T01:CDS |
| AACACATGAAACGACGGCGC+AGG | 0.595682 | 8:-66426162 | MsG0880045917.01.T01:CDS |
| AAATTCTCAATCATCGCCCA+TGG | 0.597393 | 8:-66426561 | MsG0880045917.01.T01:CDS |
| GAAAGGTTGTTATATAGCGA+CGG | 0.598399 | 8:-66424701 | MsG0880045917.01.T01:CDS |
| TAGATTTGTTGGGCGTACCA+AGG | 0.600268 | 8:-66424569 | MsG0880045917.01.T01:CDS |
| ACGGTGTGGAAATTGTGATT+GGG | 0.603421 | 8:-66426088 | MsG0880045917.01.T01:CDS |
| GGGTACACTTCTGGATCAAG+AGG | 0.609222 | 8:+66425819 | None:intergenic |
| AGAGGTACCTGATGATCCAG+AGG | 0.611459 | 8:-66424878 | MsG0880045917.01.T01:CDS |
| GAATCGGTGGTTCTAGAAGG+TGG | 0.612809 | 8:-66426029 | MsG0880045917.01.T01:CDS |
| GGAAGCGGCACAAGCAATGG+TGG | 0.615498 | 8:+66426436 | None:intergenic |
| ATATAACAACCTTTCACCCC+AGG | 0.618069 | 8:+66424709 | None:intergenic |
| AACTCCAATTTACTAGACCA+AGG | 0.620795 | 8:+66425966 | None:intergenic |
| GGATTTCTCAATGAGTGTAA+CGG | 0.624743 | 8:+66426457 | None:intergenic |
| GGGTCCTTCGATTAGAGGCA+CGG | 0.625148 | 8:+66425841 | None:intergenic |
| TTGATTCTTCAGTTACGGTG+AGG | 0.625754 | 8:+66426264 | None:intergenic |
| CGGGGAAGAAGGAGTGAAGG+TGG | 0.626528 | 8:-66424788 | MsG0880045917.01.T01:CDS |
| TGCACCCGCAAATGTTTACA+CGG | 0.626532 | 8:-66426139 | MsG0880045917.01.T01:CDS |
| ACATGCATACCTGTAGGCCG+AGG | 0.628125 | 8:+66425798 | None:intergenic |
| GACCGTATCAAGCCATCTCG+GGG | 0.629690 | 8:-66424806 | MsG0880045917.01.T01:CDS |
| CTTAACGGTCCACAATCATA+CGG | 0.634820 | 8:-66426311 | MsG0880045917.01.T01:CDS |
| GGTACACTTCTGGATCAAGA+GGG | 0.635457 | 8:+66425820 | None:intergenic |
| CCGTTTAAGATCAACAATGG+TGG | 0.636811 | 8:+66424603 | None:intergenic |
| AAACCGTTTAAGATCAACAA+TGG | 0.639170 | 8:+66424600 | None:intergenic |
| GCCGGCCCATCAATCCAAGA+CGG | 0.640743 | 8:+66426206 | None:intergenic |
| GCTTTAGATTGGTGTGACGG+AGG | 0.647295 | 8:-66426392 | MsG0880045917.01.T01:CDS |
| TAAGCTCTTGAGAAAGTGAA+CGG | 0.649924 | 8:+66426330 | None:intergenic |
| TCTCGGGGAAGAAGGAGTGA+AGG | 0.650707 | 8:-66424791 | MsG0880045917.01.T01:CDS |
| TTTCTTGGCGAGAAAGTAAG+CGG | 0.651174 | 8:+66426487 | None:intergenic |
| TAGTTCATGAAGTATGATTG+TGG | 0.651181 | 8:+66424333 | None:intergenic |
| GTATGTGTGTGGGATGTCAA+AGG | 0.654645 | 8:-66424905 | MsG0880045917.01.T01:CDS |
| ACTCCAATTTACTAGACCAA+GGG | 0.659722 | 8:+66425967 | None:intergenic |
| CGCGGTGGAGAAGTACGGTG+TGG | 0.659962 | 8:-66426102 | MsG0880045917.01.T01:CDS |
| AGGAGGAAAAGTTGAATCGG+TGG | 0.662075 | 8:-66426042 | MsG0880045917.01.T01:CDS |
| GCTACCGTGCCTCTAATCGA+AGG | 0.663877 | 8:-66425845 | MsG0880045917.01.T01:CDS |
| AATTGGAACACATGAAACGA+CGG | 0.667048 | 8:-66426168 | MsG0880045917.01.T01:CDS |
| CATGCATACCTGTAGGCCGA+GGG | 0.669805 | 8:+66425799 | None:intergenic |
| GCGACGGGACATAGTTGCTG+GGG | 0.671793 | 8:-66424685 | MsG0880045917.01.T01:CDS |
| GCTAATCTGTATGAATCTAG+CGG | 0.674534 | 8:-66426639 | MsG0880045917.01.T01:CDS |
| CGTCACACCAATCTAAAGCG+AGG | 0.676382 | 8:+66426396 | None:intergenic |
| AGACGGCAAAGTAGCTGACG+AGG | 0.677945 | 8:+66426223 | None:intergenic |
| CGGCAAAGTAGCTGACGAGG+AGG | 0.678972 | 8:+66426226 | None:intergenic |
| TGTGTGTGGGATGTCAAAGG+AGG | 0.686845 | 8:-66424902 | MsG0880045917.01.T01:CDS |
| GGCACACCATCATCAGTACA+CGG | 0.689638 | 8:+66424748 | None:intergenic |
| GACACTGATTGAGAACGCGG+TGG | 0.698796 | 8:-66426117 | MsG0880045917.01.T01:CDS |
| AGTTACGGTGAGGCTGAGAG+CGG | 0.699730 | 8:+66426274 | None:intergenic |
| TCGGTGGTTCTAGAAGGTGG+GGG | 0.701122 | 8:-66426026 | MsG0880045917.01.T01:CDS |
| TTTCTCAATGAGTGTAACGG+AGG | 0.702173 | 8:+66426460 | None:intergenic |
| GTACACTTCTGGATCAAGAG+GGG | 0.705861 | 8:+66425821 | None:intergenic |
| ACGGACACTGATTGAGAACG+CGG | 0.711223 | 8:-66426120 | MsG0880045917.01.T01:CDS |
| TGACGAGGAGGAAGAAACAG+TGG | 0.711480 | 8:+66426238 | None:intergenic |
| GCTCTTGAGAAAGTGAACGG+TGG | 0.727863 | 8:+66426333 | None:intergenic |
| AATCTGTATGAATCTAGCGG+CGG | 0.733075 | 8:-66426636 | MsG0880045917.01.T01:CDS |
| GATTATAGGAGAGATTCCTG+GGG | 0.781423 | 8:-66424725 | MsG0880045917.01.T01:CDS |
| GATGATCCAGAGGAGATACG+GGG | 0.782160 | 8:-66424868 | MsG0880045917.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAATTAA+GGG | - | Chr8:66425644-66425663 | MsG0880045917.01.T01:intron | 0.0% |
| !! | TAAAAAAAAAAAAAAAATTA+AGG | - | Chr8:66425643-66425662 | MsG0880045917.01.T01:intron | 0.0% |
| !!! | AATTTTTTTTTTTTTTTTAT+AGG | + | Chr8:66425642-66425661 | None:intergenic | 0.0% |
| !! | AATTTAAAAATCAAAGATAT+CGG | + | Chr8:66425254-66425273 | None:intergenic | 10.0% |
| !!! | TATCTTTGATTTTTAAATTT+AGG | - | Chr8:66425255-66425274 | MsG0880045917.01.T01:intron | 10.0% |
| !!! | TATTTTATTTTAAACAATGT+TGG | - | Chr8:66425289-66425308 | MsG0880045917.01.T01:intron | 10.0% |
| !!! | TTAAATTATAAAAGTATTCT+TGG | + | Chr8:66426543-66426562 | None:intergenic | 10.0% |
| !! | AAAAAAATGAAAAACTAAAG+AGG | - | Chr8:66424275-66424294 | MsG0880045917.01.T01:three_prime_UTR | 15.0% |
| !!! | TATAATTTACAAACGTATTT+TGG | - | Chr8:66425486-66425505 | MsG0880045917.01.T01:intron | 15.0% |
| !! | TAAACATCAGTATCTATTAA+TGG | + | Chr8:66426025-66426044 | None:intergenic | 20.0% |
| !! | TATGATGTATATATAACTGT+TGG | - | Chr8:66426488-66426507 | MsG0880045917.01.T01:CDS | 20.0% |
| !! | TCACAGAAAACTATTTATTT+AGG | - | Chr8:66425212-66425231 | MsG0880045917.01.T01:intron | 20.0% |
| !! | TTGTTGTATTTATATGCATT+TGG | - | Chr8:66425759-66425778 | MsG0880045917.01.T01:intron | 20.0% |
| !!! | CAAGAATTTCTAAAAACATT+TGG | + | Chr8:66425742-66425761 | None:intergenic | 20.0% |
| !!! | TGATGTTTATTTTCTTATCA+GGG | - | Chr8:66426036-66426055 | MsG0880045917.01.T01:CDS | 20.0% |
| !!! | TTCTTTAAAAACACTTAGTT+TGG | + | Chr8:66425671-66425690 | None:intergenic | 20.0% |
| ! | AAATGGTTTGATCCAATTTA+TGG | + | Chr8:66425810-66425829 | None:intergenic | 25.0% |
| ! | AACCAAGAAATCTATGAATA+AGG | + | Chr8:66425787-66425806 | None:intergenic | 25.0% |
| ! | AATGTTGGTCACTTAAATTA+TGG | - | Chr8:66425304-66425323 | MsG0880045917.01.T01:intron | 25.0% |
| ! | ATCCTTATTCATAGATTTCT+TGG | - | Chr8:66425782-66425801 | MsG0880045917.01.T01:intron | 25.0% |
| ! | CAAATGTTAGTAATTACTTC+TGG | + | Chr8:66425619-66425638 | None:intergenic | 25.0% |
| ! | GAGTCTCTTAAATTCATTAT+GGG | + | Chr8:66425513-66425532 | None:intergenic | 25.0% |
| ! | TGAGTCTCTTAAATTCATTA+TGG | + | Chr8:66425514-66425533 | None:intergenic | 25.0% |
| ! | TTTAAAGAAGCAAAATGGAA+AGG | - | Chr8:66425682-66425701 | MsG0880045917.01.T01:intron | 25.0% |
| !! | TTTTCAAATTCGAGAAATGT+TGG | - | Chr8:66425840-66425859 | MsG0880045917.01.T01:CDS | 25.0% |
| !!! | ACTTAAGCTTTTTTGTCATT+TGG | - | Chr8:66425334-66425353 | MsG0880045917.01.T01:intron | 25.0% |
| !!! | CAGATTAGCATTTTTAGAAT+CGG | + | Chr8:66424319-66424338 | None:intergenic | 25.0% |
| !!! | CTGATGTTTATTTTCTTATC+AGG | - | Chr8:66426035-66426054 | MsG0880045917.01.T01:CDS | 25.0% |
| !!! | CTTAAGCTTTTTTGTCATTT+GGG | - | Chr8:66425335-66425354 | MsG0880045917.01.T01:intron | 25.0% |
| !!! | GATGTTTATTTTCTTATCAG+GGG | - | Chr8:66426037-66426056 | MsG0880045917.01.T01:CDS | 25.0% |
| !!! | GTGTTTTTAAAGAAGCAAAA+TGG | - | Chr8:66425677-66425696 | MsG0880045917.01.T01:intron | 25.0% |
| AACACCACTTGAAAATGAAA+TGG | - | Chr8:66425715-66425734 | MsG0880045917.01.T01:intron | 30.0% | |
| ACAATCATACTTCATGAACT+AGG | - | Chr8:66426638-66426657 | MsG0880045917.01.T01:CDS | 30.0% | |
| AGATTGAACTGAATTGATAG+TGG | + | Chr8:66424386-66424405 | None:intergenic | 30.0% | |
| AGTTGATTGGACTTACTAAT+TGG | - | Chr8:66426695-66426714 | MsG0880045917.01.T01:five_prime_UTR | 30.0% | |
| ATTGGATCAAACCATTTCTT+TGG | - | Chr8:66425813-66425832 | MsG0880045917.01.T01:CDS | 30.0% | |
| CTCACACACTAAATTTGATT+TGG | + | Chr8:66426671-66426690 | None:intergenic | 30.0% | |
| CTGTGACTAAGATATTTGAT+TGG | + | Chr8:66425198-66425217 | None:intergenic | 30.0% | |
| GAGTTTAAAAGATGATGTCA+TGG | - | Chr8:66425585-66425604 | MsG0880045917.01.T01:intron | 30.0% | |
| GATTTCTTGGTTCCATAAAT+TGG | - | Chr8:66425795-66425814 | MsG0880045917.01.T01:intron | 30.0% | |
| GTCACTTAAATTATGGACTT+TGG | - | Chr8:66425311-66425330 | MsG0880045917.01.T01:intron | 30.0% | |
| TAGTTCATGAAGTATGATTG+TGG | + | Chr8:66426639-66426658 | None:intergenic | 30.0% | |
| TTAGTAAGTCCAATCAACTA+AGG | + | Chr8:66426694-66426713 | None:intergenic | 30.0% | |
| TTGAAAAGAGTCCAAAGAAA+TGG | + | Chr8:66425827-66425846 | None:intergenic | 30.0% | |
| TTGATTGTGTGCTTACTTAT+AGG | - | Chr8:66425863-66425882 | MsG0880045917.01.T01:CDS | 30.0% | |
| ! | AAACCGTTTAAGATCAACAA+TGG | + | Chr8:66426372-66426391 | None:intergenic | 30.0% |
| ! | GACTATAGTGTGTAAGTTTT+AGG | + | Chr8:66425386-66425405 | None:intergenic | 30.0% |
| ! | GTAATAGCATTAGCTTCTTT+GGG | + | Chr8:66425084-66425103 | None:intergenic | 30.0% |
| ! | TCATGTGTTCCAATTGTTTT+AGG | + | Chr8:66424796-66424815 | None:intergenic | 30.0% |
| !! | GGTTTTTGATTCTTCAGTTA+CGG | + | Chr8:66424713-66424732 | None:intergenic | 30.0% |
| AAAGGTTGTTATATAGCGAC+GGG | - | Chr8:66426269-66426288 | MsG0880045917.01.T01:CDS | 35.0% | |
| AACTCCAATTTACTAGACCA+AGG | + | Chr8:66425006-66425025 | None:intergenic | 35.0% | |
| AATTGGAACACATGAAACGA+CGG | - | Chr8:66424801-66424820 | MsG0880045917.01.T01:CDS | 35.0% | |
| ACCTGGAACATGTAATTCAA+AGG | + | Chr8:66425922-66425941 | None:intergenic | 35.0% | |
| ACCTTTGAATTACATGTTCC+AGG | - | Chr8:66425918-66425937 | MsG0880045917.01.T01:CDS | 35.0% | |
| ACTCCAATTTACTAGACCAA+GGG | + | Chr8:66425005-66425024 | None:intergenic | 35.0% | |
| CCACCATTGTTGATCTTAAA+CGG | - | Chr8:66426366-66426385 | MsG0880045917.01.T01:CDS | 35.0% | |
| CGATATTGTTGAGTCAACAA+TGG | + | Chr8:66426615-66426634 | None:intergenic | 35.0% | |
| GAAAGGTTGTTATATAGCGA+CGG | - | Chr8:66426268-66426287 | MsG0880045917.01.T01:CDS | 35.0% | |
| GCTAATCTGTATGAATCTAG+CGG | - | Chr8:66424330-66424349 | MsG0880045917.01.T01:three_prime_UTR | 35.0% | |
| GGAAATTGTGATTGGGAAAT+TGG | - | Chr8:66424888-66424907 | MsG0880045917.01.T01:CDS | 35.0% | |
| GGATTTCTCAATGAGTGTAA+CGG | + | Chr8:66424515-66424534 | None:intergenic | 35.0% | |
| TAAGCTCTTGAGAAAGTGAA+CGG | + | Chr8:66424642-66424661 | None:intergenic | 35.0% | |
| TACCAATGAAGCTACCTATA+GGG | + | Chr8:66425547-66425566 | None:intergenic | 35.0% | |
| TCAACATTGTTAGTTGAGCT+AGG | - | Chr8:66425427-66425446 | MsG0880045917.01.T01:intron | 35.0% | |
| TCACTTTCTCAAGAGCTTAA+CGG | - | Chr8:66424643-66424662 | MsG0880045917.01.T01:CDS | 35.0% | |
| TGTTGAGTCAACAATGGAAA+AGG | + | Chr8:66426609-66426628 | None:intergenic | 35.0% | |
| TTACCAATGAAGCTACCTAT+AGG | + | Chr8:66425548-66425567 | None:intergenic | 35.0% | |
| TTTAGTCCTGCTAGATTTGT+TGG | - | Chr8:66426389-66426408 | MsG0880045917.01.T01:CDS | 35.0% | |
| ! | CGTAATAGCATTAGCTTCTT+TGG | + | Chr8:66425085-66425104 | None:intergenic | 35.0% |
| ! | TAGCTAAGAAAAAGAGCATG+TGG | + | Chr8:66425108-66425127 | None:intergenic | 35.0% |
| ! | TTAGTCCTGCTAGATTTGTT+GGG | - | Chr8:66426390-66426409 | MsG0880045917.01.T01:CDS | 35.0% |
| !! | AGATTTCACTTTTGTGCCAA+TGG | + | Chr8:66425947-66425966 | None:intergenic | 35.0% |
| !! | GATTTCACTTTTGTGCCAAT+GGG | + | Chr8:66425946-66425965 | None:intergenic | 35.0% |
| !! | GGGCTCTAAAACAATACTAT+GGG | + | Chr8:66425064-66425083 | None:intergenic | 35.0% |
| !! | GTTTATTTTCTTATCAGGGG+AGG | - | Chr8:66426040-66426059 | MsG0880045917.01.T01:CDS | 35.0% |
| !! | TGGACCATTTCATTTTCAAG+TGG | + | Chr8:66425722-66425741 | None:intergenic | 35.0% |
| !! | TGGGCTCTAAAACAATACTA+TGG | + | Chr8:66425065-66425084 | None:intergenic | 35.0% |
| AAATTCTCAATCATCGCCCA+TGG | - | Chr8:66424408-66424427 | MsG0880045917.01.T01:three_prime_UTR | 40.0% | |
| AATCAATTGCGATGCTGAAG+AGG | - | Chr8:66426132-66426151 | MsG0880045917.01.T01:CDS | 40.0% | |
| AATCTGTATGAATCTAGCGG+CGG | - | Chr8:66424333-66424352 | MsG0880045917.01.T01:three_prime_UTR | 40.0% | |
| AATTGGAGTTGTTGAGCTCA+AGG | - | Chr8:66425016-66425035 | MsG0880045917.01.T01:intron | 40.0% | |
| ACCAATGAAGCTACCTATAG+GGG | + | Chr8:66425546-66425565 | None:intergenic | 40.0% | |
| ACGGTGTGGAAATTGTGATT+GGG | - | Chr8:66424881-66424900 | MsG0880045917.01.T01:CDS | 40.0% | |
| AGTGTCCGTGTAAACATTTG+CGG | + | Chr8:66424838-66424857 | None:intergenic | 40.0% | |
| ATATAACAACCTTTCACCCC+AGG | + | Chr8:66426263-66426282 | None:intergenic | 40.0% | |
| ATCAATTGCGATGCTGAAGA+GGG | - | Chr8:66426133-66426152 | MsG0880045917.01.T01:CDS | 40.0% | |
| ATTGGTACATGCATACCTGT+AGG | + | Chr8:66425180-66425199 | None:intergenic | 40.0% | |
| CCAGGAATCTCTCCTATAAT+CGG | + | Chr8:66426245-66426264 | None:intergenic | 40.0% | |
| CGATTATAGGAGAGATTCCT+GGG | - | Chr8:66426243-66426262 | MsG0880045917.01.T01:CDS | 40.0% | |
| CTTAACGGTCCACAATCATA+CGG | - | Chr8:66424658-66424677 | MsG0880045917.01.T01:CDS | 40.0% | |
| GAAATGCGTATTCTGTTTGG+AGG | + | Chr8:66424364-66424383 | None:intergenic | 40.0% | |
| GATCGATAACCGTATGATTG+TGG | + | Chr8:66424670-66424689 | None:intergenic | 40.0% | |
| GATTATAGGAGAGATTCCTG+GGG | - | Chr8:66426244-66426263 | MsG0880045917.01.T01:CDS | 40.0% | |
| GATTATCACCACTTCGTCTA+CGG | + | Chr8:66425362-66425381 | None:intergenic | 40.0% | |
| GATTGGGAAATTGGAGAAGT+TGG | - | Chr8:66424897-66424916 | MsG0880045917.01.T01:CDS | 40.0% | |
| GGAAGGAGGAAAAGTTGAAT+CGG | - | Chr8:66424924-66424943 | MsG0880045917.01.T01:intron | 40.0% | |
| GTGGAAATGCGTATTCTGTT+TGG | + | Chr8:66424367-66424386 | None:intergenic | 40.0% | |
| TACGGTGTGGAAATTGTGAT+TGG | - | Chr8:66424880-66424899 | MsG0880045917.01.T01:CDS | 40.0% | |
| TTGATTCTTCAGTTACGGTG+AGG | + | Chr8:66424708-66424727 | None:intergenic | 40.0% | |
| TTTCTCAATGAGTGTAACGG+AGG | + | Chr8:66424512-66424531 | None:intergenic | 40.0% | |
| TTTCTTGGCGAGAAAGTAAG+CGG | + | Chr8:66424485-66424504 | None:intergenic | 40.0% | |
| ! | AGCTCAAGGTTTAGAGTTTC+TGG | - | Chr8:66425030-66425049 | MsG0880045917.01.T01:intron | 40.0% |
| ! | CCGTTTAAGATCAACAATGG+TGG | + | Chr8:66426369-66426388 | None:intergenic | 40.0% |
| ! | GCTCAAGGTTTAGAGTTTCT+GGG | - | Chr8:66425031-66425050 | MsG0880045917.01.T01:intron | 40.0% |
| ! | GTTTAGAGTTTCTGGGCTTA+AGG | - | Chr8:66425038-66425057 | MsG0880045917.01.T01:intron | 40.0% |
| !! | GATGCGGTGATTTTAGCATT+GGG | - | Chr8:66424979-66424998 | MsG0880045917.01.T01:intron | 40.0% |
| !! | GTACTTCTCGAACTTGTTAC+AGG | + | Chr8:66426575-66426594 | None:intergenic | 40.0% |
| !! | TTTTTGCCGTGTACTGATGA+TGG | - | Chr8:66426215-66426234 | MsG0880045917.01.T01:CDS | 40.0% |
| !!! | TCCAATTGTTTTAGGCCCAT+GGG | + | Chr8:66424788-66424807 | None:intergenic | 40.0% |
| !!! | TTCCAATTGTTTTAGGCCCA+TGG | + | Chr8:66424789-66424808 | None:intergenic | 40.0% |
| AAGAAAGTGGTTGTTTGCGG+TGG | - | Chr8:66424439-66424458 | MsG0880045917.01.T01:three_prime_UTR | 45.0% | |
| AAGACCGTATCAAGCCATCT+CGG | - | Chr8:66426161-66426180 | MsG0880045917.01.T01:CDS | 45.0% | |
| ACTTTCTTCGGGTGATCCAT+GGG | + | Chr8:66424427-66424446 | None:intergenic | 45.0% | |
| ACTTTGCCGTCTTGGATTGA+TGG | - | Chr8:66424757-66424776 | MsG0880045917.01.T01:CDS | 45.0% | |
| AGGAGGAAAAGTTGAATCGG+TGG | - | Chr8:66424927-66424946 | MsG0880045917.01.T01:intron | 45.0% | |
| CAATGAAGCTACCTATAGGG+GGG | + | Chr8:66425544-66425563 | None:intergenic | 45.0% | |
| CCAATGAAGCTACCTATAGG+GGG | + | Chr8:66425545-66425564 | None:intergenic | 45.0% | |
| CCGAAGAAAGTGGTTGTTTG+CGG | - | Chr8:66424436-66424455 | MsG0880045917.01.T01:three_prime_UTR | 45.0% | |
| CCGATTATAGGAGAGATTCC+TGG | - | Chr8:66426242-66426261 | MsG0880045917.01.T01:CDS | 45.0% | |
| CCGCAAACAACCACTTTCTT+CGG | + | Chr8:66424439-66424458 | None:intergenic | 45.0% | |
| CGCAAACAACCACTTTCTTC+GGG | + | Chr8:66424438-66424457 | None:intergenic | 45.0% | |
| CTCAAATGAAACCCCCCTAT+AGG | - | Chr8:66425530-66425549 | MsG0880045917.01.T01:intron | 45.0% | |
| CTGATGATCCAGAGGAGATA+CGG | - | Chr8:66426099-66426118 | MsG0880045917.01.T01:CDS | 45.0% | |
| CTTTGCCGTCTTGGATTGAT+GGG | - | Chr8:66424758-66424777 | MsG0880045917.01.T01:CDS | 45.0% | |
| GCTTACTTTCTCGCCAAGAA+AGG | - | Chr8:66424484-66424503 | MsG0880045917.01.T01:three_prime_UTR | 45.0% | |
| GCTTAGTCACTCTTGGTAGA+TGG | - | Chr8:66426422-66426441 | MsG0880045917.01.T01:CDS | 45.0% | |
| GGTACACTTCTGGATCAAGA+GGG | + | Chr8:66425152-66425171 | None:intergenic | 45.0% | |
| GTACACTTCTGGATCAAGAG+GGG | + | Chr8:66425151-66425170 | None:intergenic | 45.0% | |
| GTATGTGTGTGGGATGTCAA+AGG | - | Chr8:66426064-66426083 | MsG0880045917.01.T01:CDS | 45.0% | |
| GTGTCCGTGTAAACATTTGC+GGG | + | Chr8:66424837-66424856 | None:intergenic | 45.0% | |
| GTGTGTGAGCCTTAGTTGAT+TGG | - | Chr8:66426682-66426701 | MsG0880045917.01.T01:five_prime_UTR | 45.0% | |
| GTTGCTGAGCTTGTACTTGA+TGG | - | Chr8:66426338-66426357 | MsG0880045917.01.T01:CDS | 45.0% | |
| TACATGTTCCAGGTTCCCAT+TGG | - | Chr8:66425928-66425947 | MsG0880045917.01.T01:CDS | 45.0% | |
| TACCAAGAGTGACTAAGCCT+TGG | + | Chr8:66426420-66426439 | None:intergenic | 45.0% | |
| TACCAAGGCTTAGTCACTCT+TGG | - | Chr8:66426415-66426434 | MsG0880045917.01.T01:CDS | 45.0% | |
| TGATGATCCAGAGGAGATAC+GGG | - | Chr8:66426100-66426119 | MsG0880045917.01.T01:CDS | 45.0% | |
| TGCACCCGCAAATGTTTACA+CGG | - | Chr8:66424830-66424849 | MsG0880045917.01.T01:CDS | 45.0% | |
| TGGGAAATTGGAGAAGTTGG+TGG | - | Chr8:66424900-66424919 | MsG0880045917.01.T01:CDS | 45.0% | |
| ! | AGTTGCTGGGGTATTCTCAA+TGG | - | Chr8:66426296-66426315 | MsG0880045917.01.T01:CDS | 45.0% |
| ! | CTCGCTTTAGATTGGTGTGA+CGG | - | Chr8:66424574-66424593 | MsG0880045917.01.T01:CDS | 45.0% |
| ! | GTGGATTCCTCGCTTTAGAT+TGG | - | Chr8:66424566-66424585 | MsG0880045917.01.T01:CDS | 45.0% |
| ! | TTGATCCAGAAGTGTACCCT+CGG | - | Chr8:66425154-66425173 | MsG0880045917.01.T01:intron | 45.0% |
| !! | AATCGGTGGTTCTAGAAGGT+GGG | - | Chr8:66424941-66424960 | MsG0880045917.01.T01:intron | 45.0% |
| !! | GAAATTGGAGAAGTTGGTGG+TGG | - | Chr8:66424903-66424922 | MsG0880045917.01.T01:CDS | 45.0% |
| !! | GATGATGGTGTGCCGATTAT+AGG | - | Chr8:66426230-66426249 | MsG0880045917.01.T01:CDS | 45.0% |
| !! | GGATGCGGTGATTTTAGCAT+TGG | - | Chr8:66424978-66424997 | MsG0880045917.01.T01:intron | 45.0% |
| !! | GTTGAATCGGTGGTTCTAGA+AGG | - | Chr8:66424937-66424956 | MsG0880045917.01.T01:intron | 45.0% |
| !! | TAGATTTGTTGGGCGTACCA+AGG | - | Chr8:66426400-66426419 | MsG0880045917.01.T01:CDS | 45.0% |
| !! | TGATTTTAGCATTGGGCCCT+TGG | - | Chr8:66424986-66425005 | MsG0880045917.01.T01:intron | 45.0% |
| !! | TTAAAATAAAATAAAATTGA+AGG | + | Chr8:66425282-66425301 | None:intergenic | 5.0% |
| AAAGTGGTTGTTTGCGGTGG+CGG | - | Chr8:66424442-66424461 | MsG0880045917.01.T01:three_prime_UTR | 50.0% | |
| AAGAGGGGTCCTTCGATTAG+AGG | + | Chr8:66425136-66425155 | None:intergenic | 50.0% | |
| AGACCGTATCAAGCCATCTC+GGG | - | Chr8:66426162-66426181 | MsG0880045917.01.T01:CDS | 50.0% | |
| ATTCTCAATGGTCCTGCCAC+TGG | - | Chr8:66426308-66426327 | MsG0880045917.01.T01:CDS | 50.0% | |
| ATTTGGGTCCGTAGACGAAG+TGG | - | Chr8:66425351-66425370 | MsG0880045917.01.T01:intron | 50.0% | |
| CACTTTCTTCGGGTGATCCA+TGG | + | Chr8:66424428-66424447 | None:intergenic | 50.0% | |
| CATGGATCACCCGAAGAAAG+TGG | - | Chr8:66424426-66424445 | MsG0880045917.01.T01:three_prime_UTR | 50.0% | |
| CCCCCTATAGGTAGCTTCAT+TGG | - | Chr8:66425542-66425561 | MsG0880045917.01.T01:intron | 50.0% | |
| CGTATCTCCTCTGGATCATC+AGG | + | Chr8:66426101-66426120 | None:intergenic | 50.0% | |
| GAGGAATCCACCAGCTTTAC+CGG | + | Chr8:66424557-66424576 | None:intergenic | 50.0% | |
| GATGATCCAGAGGAGATACG+GGG | - | Chr8:66426101-66426120 | MsG0880045917.01.T01:CDS | 50.0% | |
| GATTGAAGCTTTCACGAGCG+AGG | + | Chr8:66424615-66424634 | None:intergenic | 50.0% | |
| GCCCATGGGCCTAAAACAAT+TGG | - | Chr8:66424784-66424803 | MsG0880045917.01.T01:CDS | 50.0% | |
| GCTCTTGAGAAAGTGAACGG+TGG | + | Chr8:66424639-66424658 | None:intergenic | 50.0% | |
| GGCACACCATCATCAGTACA+CGG | + | Chr8:66426224-66426243 | None:intergenic | 50.0% | |
| GGGCCCTTGGTCTAGTAAAT+TGG | - | Chr8:66424999-66425018 | MsG0880045917.01.T01:intron | 50.0% | |
| GGGTACACTTCTGGATCAAG+AGG | + | Chr8:66425153-66425172 | None:intergenic | 50.0% | |
| GTACGCCCAACAAATCTAGC+AGG | + | Chr8:66426398-66426417 | None:intergenic | 50.0% | |
| GTCACTCTTGGTAGATGGTG+TGG | - | Chr8:66426427-66426446 | MsG0880045917.01.T01:CDS | 50.0% | |
| TGACGAGGAGGAAGAAACAG+TGG | + | Chr8:66424734-66424753 | None:intergenic | 50.0% | |
| TGGGATGTCAAAGGAGGAAG+AGG | - | Chr8:66426073-66426092 | MsG0880045917.01.T01:CDS | 50.0% | |
| TGTGTGTGGGATGTCAAAGG+AGG | - | Chr8:66426067-66426086 | MsG0880045917.01.T01:CDS | 50.0% | |
| TTCCCCGAGATGGCTTGATA+CGG | + | Chr8:66426168-66426187 | None:intergenic | 50.0% | |
| ! | ACGGACACTGATTGAGAACG+CGG | - | Chr8:66424849-66424868 | MsG0880045917.01.T01:CDS | 50.0% |
| ! | CGTCACACCAATCTAAAGCG+AGG | + | Chr8:66424576-66424595 | None:intergenic | 50.0% |
| ! | CTTTTGTGCCAATGGGAACC+TGG | + | Chr8:66425939-66425958 | None:intergenic | 50.0% |
| ! | GCTTTAGATTGGTGTGACGG+AGG | - | Chr8:66424577-66424596 | MsG0880045917.01.T01:CDS | 50.0% |
| !! | AGAGGTACCTGATGATCCAG+AGG | - | Chr8:66426091-66426110 | MsG0880045917.01.T01:CDS | 50.0% |
| !! | ATCGGTGGTTCTAGAAGGTG+GGG | - | Chr8:66424942-66424961 | MsG0880045917.01.T01:intron | 50.0% |
| !! | GAATCGGTGGTTCTAGAAGG+TGG | - | Chr8:66424940-66424959 | MsG0880045917.01.T01:intron | 50.0% |
| !! | TGTAACGGAGGCACCTTTCT+TGG | + | Chr8:66424500-66424519 | None:intergenic | 50.0% |
| !! | TTGGAGAAGTTGGTGGTGGA+AGG | - | Chr8:66424907-66424926 | MsG0880045917.01.T01:CDS | 50.0% |
| !!! | ATTGTTTTAGGCCCATGGGC+CGG | + | Chr8:66424784-66424803 | None:intergenic | 50.0% |
| AACACATGAAACGACGGCGC+AGG | - | Chr8:66424807-66424826 | MsG0880045917.01.T01:CDS | 55.0% | |
| ACATGCATACCTGTAGGCCG+AGG | + | Chr8:66425174-66425193 | None:intergenic | 55.0% | |
| AGACGGCAAAGTAGCTGACG+AGG | + | Chr8:66424749-66424768 | None:intergenic | 55.0% | |
| AGCGACGGGACATAGTTGCT+GGG | - | Chr8:66426283-66426302 | MsG0880045917.01.T01:CDS | 55.0% | |
| AGTTACGGTGAGGCTGAGAG+CGG | + | Chr8:66424698-66424717 | None:intergenic | 55.0% | |
| CATGCATACCTGTAGGCCGA+GGG | + | Chr8:66425173-66425192 | None:intergenic | 55.0% | |
| GACCGTATCAAGCCATCTCG+GGG | - | Chr8:66426163-66426182 | MsG0880045917.01.T01:CDS | 55.0% | |
| GAGAACGCGGTGGAGAAGTA+CGG | - | Chr8:66424862-66424881 | MsG0880045917.01.T01:CDS | 55.0% | |
| GCTACCGTGCCTCTAATCGA+AGG | - | Chr8:66425124-66425143 | MsG0880045917.01.T01:intron | 55.0% | |
| GGAGAGATTCCTGGGGTGAA+AGG | - | Chr8:66426251-66426270 | MsG0880045917.01.T01:CDS | 55.0% | |
| GGGTCCTTCGATTAGAGGCA+CGG | + | Chr8:66425131-66425150 | None:intergenic | 55.0% | |
| TAGCGACGGGACATAGTTGC+TGG | - | Chr8:66426282-66426301 | MsG0880045917.01.T01:CDS | 55.0% | |
| TCAAGCCATCTCGGGGAAGA+AGG | - | Chr8:66426170-66426189 | MsG0880045917.01.T01:CDS | 55.0% | |
| TCACTCCTTCTTCCCCGAGA+TGG | + | Chr8:66426178-66426197 | None:intergenic | 55.0% | |
| TCCACCAGCTTTACCGGAAG+CGG | + | Chr8:66424551-66424570 | None:intergenic | 55.0% | |
| TCGTTACCCCGTATCTCCTC+TGG | + | Chr8:66426110-66426129 | None:intergenic | 55.0% | |
| TCTCGGGGAAGAAGGAGTGA+AGG | - | Chr8:66426178-66426197 | MsG0880045917.01.T01:CDS | 55.0% | |
| ! | CACGAGCGAGGTGTTCCATT+GGG | + | Chr8:66424603-66424622 | None:intergenic | 55.0% |
| ! | CAGGGGAGGTGTATGTGTGT+GGG | - | Chr8:66426054-66426073 | MsG0880045917.01.T01:CDS | 55.0% |
| ! | CGTCAGCTACTTTGCCGTCT+TGG | - | Chr8:66424749-66424768 | MsG0880045917.01.T01:CDS | 55.0% |
| ! | GACACTGATTGAGAACGCGG+TGG | - | Chr8:66424852-66424871 | MsG0880045917.01.T01:CDS | 55.0% |
| ! | TCACGAGCGAGGTGTTCCAT+TGG | + | Chr8:66424604-66424623 | None:intergenic | 55.0% |
| ! | TCAGGGGAGGTGTATGTGTG+TGG | - | Chr8:66426053-66426072 | MsG0880045917.01.T01:CDS | 55.0% |
| !! | ACCATTGCTTGTGCCGCTTC+CGG | - | Chr8:66424535-66424554 | MsG0880045917.01.T01:three_prime_UTR | 55.0% |
| !! | GAGAAGTTGGTGGTGGAAGG+AGG | - | Chr8:66424910-66424929 | MsG0880045917.01.T01:CDS | 55.0% |
| !! | GTTTGCGGTGGCGGAGTTAT+CGG | - | Chr8:66424451-66424470 | MsG0880045917.01.T01:three_prime_UTR | 55.0% |
| !! | TCGGTGGTTCTAGAAGGTGG+GGG | - | Chr8:66424943-66424962 | MsG0880045917.01.T01:intron | 55.0% |
| !! | TCTAGAAGGTGGGGGTGTTG+TGG | - | Chr8:66424951-66424970 | MsG0880045917.01.T01:intron | 55.0% |
| ACCGGAAGCGGCACAAGCAA+TGG | + | Chr8:66424539-66424558 | None:intergenic | 60.0% | |
| CGGCAAAGTAGCTGACGAGG+AGG | + | Chr8:66424746-66424765 | None:intergenic | 60.0% | |
| CGGGGAAGAAGGAGTGAAGG+TGG | - | Chr8:66426181-66426200 | MsG0880045917.01.T01:CDS | 60.0% | |
| CTCAGCAACAGCAGCTCCAG+TGG | + | Chr8:66426327-66426346 | None:intergenic | 60.0% | |
| GAAGTGTACCCTCGGCCTAC+AGG | - | Chr8:66425162-66425181 | MsG0880045917.01.T01:intron | 60.0% | |
| GCCGGCCCATCAATCCAAGA+CGG | + | Chr8:66424766-66424785 | None:intergenic | 60.0% | |
| GCGACGGGACATAGTTGCTG+GGG | - | Chr8:66426284-66426303 | MsG0880045917.01.T01:CDS | 60.0% | |
| GGAAGCGGCACAAGCAATGG+TGG | + | Chr8:66424536-66424555 | None:intergenic | 60.0% | |
| ! | GCCGTCTTGGATTGATGGGC+CGG | - | Chr8:66424762-66424781 | MsG0880045917.01.T01:CDS | 60.0% |
| ! | GGGTGTTGTGGATGCGGATG+CGG | - | Chr8:66424963-66424982 | MsG0880045917.01.T01:intron | 60.0% |
| ! | GTAGGCCGAGGGTACACTTC+TGG | + | Chr8:66425162-66425181 | None:intergenic | 60.0% |
| ! | TTGGTGTGACGGAGGCCCAA+TGG | - | Chr8:66424585-66424604 | MsG0880045917.01.T01:CDS | 60.0% |
| !! | AGGTGGGGGTGTTGTGGATG+CGG | - | Chr8:66424957-66424976 | MsG0880045917.01.T01:intron | 60.0% |
| !! | TGTGCCGCTTCCGGTAAAGC+TGG | - | Chr8:66424544-66424563 | MsG0880045917.01.T01:three_prime_UTR | 60.0% |
| GCAACAGCAGCTCCAGTGGC+AGG | + | Chr8:66426323-66426342 | None:intergenic | 65.0% | |
| GCCGCTTCCGGTAAAGCTGG+TGG | - | Chr8:66424547-66424566 | MsG0880045917.01.T01:exon | 65.0% | |
| ! | CGCGGTGGAGAAGTACGGTG+TGG | - | Chr8:66424867-66424886 | MsG0880045917.01.T01:CDS | 65.0% |
| ! | GGATTGATGGGCCGGCCCAT+GGG | - | Chr8:66424770-66424789 | MsG0880045917.01.T01:CDS | 65.0% |
| ! | TGGATTGATGGGCCGGCCCA+TGG | - | Chr8:66424769-66424788 | MsG0880045917.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 66424258 | 66426733 | 66424258 | ID=MsG0880045917.01;Name=MsG0880045917.01 |
| Chr8 | mRNA | 66424258 | 66426733 | 66424258 | ID=MsG0880045917.01.T01;Parent=MsG0880045917.01;Name=MsG0880045917.01.T01;_AED=0.20;_eAED=0.20;_QI=70|1|1|1|1|1|2|306|408 |
| Chr8 | exon | 66424258 | 66424934 | 66424258 | ID=MsG0880045917.01.T01:exon:13768;Parent=MsG0880045917.01.T01 |
| Chr8 | exon | 66425808 | 66426733 | 66425808 | ID=MsG0880045917.01.T01:exon:13767;Parent=MsG0880045917.01.T01 |
| Chr8 | five_prime_UTR | 66426664 | 66426733 | 66426664 | ID=MsG0880045917.01.T01:five_prime_utr;Parent=MsG0880045917.01.T01 |
| Chr8 | CDS | 66425808 | 66426663 | 66425808 | ID=MsG0880045917.01.T01:cds;Parent=MsG0880045917.01.T01 |
| Chr8 | CDS | 66424564 | 66424934 | 66424564 | ID=MsG0880045917.01.T01:cds;Parent=MsG0880045917.01.T01 |
| Chr8 | three_prime_UTR | 66424258 | 66424563 | 66424258 | ID=MsG0880045917.01.T01:three_prime_utr;Parent=MsG0880045917.01.T01 |
| Gene Sequence |
| Protein sequence |
