AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017141.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017141.01.T01 MTR_3g101680 86.290 620 10 2 1 545 1 620 0.0 1078
MsG0380017141.01.T01 MTR_4g086240 66.443 447 111 6 124 545 176 608 0.0 613
MsG0380017141.01.T01 MTR_4g086240 44.248 113 44 4 1 99 1 108 1.06e-14 78.6
MsG0380017141.01.T01 MTR_3g101670 92.135 267 4 1 548 797 1 267 1.29e-173 500
MsG0380017141.01.T01 MTR_3g435460 48.544 206 81 6 608 796 56 253 8.25e-51 179
MsG0380017141.01.T01 MTR_8g023790 44.860 214 96 5 598 792 55 265 1.98e-48 172
MsG0380017141.01.T01 MTR_5g098780 44.545 220 88 7 605 792 55 272 3.79e-46 166
MsG0380017141.01.T01 MTR_5g098785 43.348 233 95 8 592 792 47 274 4.83e-46 166
MsG0380017141.01.T01 MTR_3g435460 47.150 193 77 6 621 796 8 192 1.50e-44 159
MsG0380017141.01.T01 MTR_2g042720 44.712 208 94 5 605 794 62 266 2.44e-42 155
MsG0380017141.01.T01 MTR_2g008610 42.784 194 77 7 605 765 57 249 4.11e-30 120
MsG0380017141.01.T01 MTR_6g033320 36.190 210 89 8 608 792 49 238 2.06e-28 114
MsG0380017141.01.T01 MTR_1g026550 36.667 240 98 8 596 794 103 329 5.51e-28 116
MsG0380017141.01.T01 MTR_5g098770 60.465 86 33 1 708 792 6 91 6.76e-28 108
MsG0380017141.01.T01 MTR_4g015570 32.031 256 89 6 605 795 54 289 1.06e-24 105
MsG0380017141.01.T01 MTR_5g097280 37.500 192 89 6 615 783 66 249 3.21e-24 103
MsG0380017141.01.T01 MTR_4g094605 36.598 194 92 6 613 783 65 250 2.41e-23 100
MsG0380017141.01.T01 MTR_6g011880 35.821 201 80 7 615 783 66 249 5.49e-23 99.8
MsG0380017141.01.T01 MTR_6g011870 35.821 201 80 7 615 783 66 249 6.15e-23 99.8
MsG0380017141.01.T01 MTR_6g011890 35.821 201 80 7 615 783 66 249 8.66e-23 99.4
MsG0380017141.01.T01 MTR_6g012080 34.826 201 82 7 615 783 66 249 3.43e-22 97.4
MsG0380017141.01.T01 MTR_6g012110 34.826 201 82 7 615 783 66 249 4.39e-22 97.1
MsG0380017141.01.T01 MTR_6g060175 36.275 204 85 10 615 795 91 272 4.56e-22 97.4
MsG0380017141.01.T01 MTR_6g060175 34.112 214 86 8 615 795 91 282 1.32e-21 96.3
MsG0380017141.01.T01 MTR_2g081090 34.653 202 83 8 615 783 63 248 4.06e-21 94.4
MsG0380017141.01.T01 MTR_2g081090 34.653 202 83 8 615 783 36 221 4.19e-21 93.6
MsG0380017141.01.T01 MTR_6g043600 34.054 185 89 7 613 783 48 213 2.82e-20 90.9
MsG0380017141.01.T01 MTR_2g436960 53.659 82 33 2 712 793 23 99 4.26e-17 77.8
MsG0380017141.01.T01 MTR_0003s0060 49.315 73 32 2 721 793 25 92 1.41e-13 67.4
MsG0380017141.01.T01 MTR_6g074140 57.692 52 22 0 742 793 50 101 2.02e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017141.01.T01 AT4G33400 59.794 582 150 11 40 545 55 628 0.0 674
MsG0380017141.01.T01 AT3G19240 56.401 578 161 10 49 545 63 630 0.0 616
MsG0380017141.01.T01 AT1G45474 71.304 230 42 3 586 797 33 256 1.48e-108 332
MsG0380017141.01.T01 AT1G45474 71.304 230 42 3 586 797 33 256 1.48e-108 332
MsG0380017141.01.T01 AT3G47470 48.020 202 80 6 608 792 57 250 3.06e-48 171
MsG0380017141.01.T01 AT3G61470 43.925 214 99 4 597 792 44 254 1.09e-46 167
MsG0380017141.01.T01 AT1G61520 41.880 234 98 8 591 792 43 270 5.63e-44 160
MsG0380017141.01.T01 AT1G61520 41.880 234 98 8 591 792 43 270 5.63e-44 160
MsG0380017141.01.T01 AT1G19150 41.827 208 100 5 605 794 65 269 6.16e-41 151
MsG0380017141.01.T01 AT1G61520 42.647 204 83 7 621 792 14 215 4.88e-39 144
MsG0380017141.01.T01 AT1G15820 43.000 200 80 7 599 765 48 246 2.87e-32 126
MsG0380017141.01.T01 AT3G54890 36.893 206 85 8 608 788 48 233 7.09e-27 110
MsG0380017141.01.T01 AT1G76570 34.914 232 98 8 603 794 109 327 4.92e-26 110
MsG0380017141.01.T01 AT3G08940 30.566 265 99 6 596 795 43 287 5.98e-25 106
MsG0380017141.01.T01 AT3G54890 38.043 184 79 7 608 788 48 199 2.06e-24 102
MsG0380017141.01.T01 AT2G05100 36.275 204 97 7 605 783 54 249 8.53e-24 102
MsG0380017141.01.T01 AT2G34420 37.113 194 92 5 613 783 63 249 8.77e-24 102
MsG0380017141.01.T01 AT2G34430 37.113 194 92 5 613 783 64 250 9.48e-24 102
MsG0380017141.01.T01 AT2G05070 36.979 192 90 6 615 783 66 249 1.03e-23 102
MsG0380017141.01.T01 AT3G27690 35.784 204 98 7 605 783 55 250 1.65e-23 101
MsG0380017141.01.T01 AT3G27690 32.836 268 137 9 545 783 29 282 1.86e-23 102
MsG0380017141.01.T01 AT1G29920 37.500 192 90 5 615 783 67 251 7.82e-23 99.4
MsG0380017141.01.T01 AT1G29910 37.500 192 90 5 615 783 67 251 7.82e-23 99.4
MsG0380017141.01.T01 AT4G10340 33.831 201 106 5 615 796 82 274 8.00e-23 99.8
MsG0380017141.01.T01 AT1G29930 37.500 192 90 5 615 783 67 251 8.35e-23 99.4
MsG0380017141.01.T01 AT5G54270 34.314 204 81 7 615 783 64 249 2.53e-22 97.8
MsG0380017141.01.T01 AT2G05100 29.889 271 142 10 566 796 1 263 2.41e-18 87.4
MsG0380017141.01.T01 AT5G01530 40.833 120 52 1 676 795 190 290 5.38e-18 85.9
MsG0380017141.01.T01 AT3G54890 34.320 169 67 7 608 752 48 196 3.71e-15 75.9
MsG0380017141.01.T01 AT5G28450 43.434 99 53 2 692 789 71 167 9.35e-15 73.6
MsG0380017141.01.T01 AT3G54890 61.905 42 16 0 608 649 48 89 1.45e-11 63.9

Find 197 sgRNAs with CRISPR-Local

Find 422 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGTCTGCCTGGAGATTT+TGG 0.083031 3:-92504875 MsG0380017141.01.T01:intron
GAGAACAAGCTTAAAGTTTA+TGG 0.161392 3:-92508260 MsG0380017141.01.T01:CDS
GCTAAAGAGGGTTCCTTCTT+TGG 0.210992 3:-92504157 MsG0380017141.01.T01:CDS
TTCTGTTGTTGTTGGTTCTT+TGG 0.218070 3:-92507533 MsG0380017141.01.T01:CDS
TTCTTGGATTGGATGATAAT+AGG 0.234318 3:-92507708 MsG0380017141.01.T01:CDS
ACATACCACTTTAAGCTTTC+AGG 0.257681 3:+92504824 None:intergenic
GAACTGTAATGAAAATTTAA+AGG 0.261353 3:+92503545 None:intergenic
CTTCGCGTCGCAGGAGTTAA+TGG 0.271659 3:-92504420 MsG0380017141.01.T01:CDS
CAGGCGAAAACCGCCTTTCC+TGG 0.278921 3:-92507472 MsG0380017141.01.T01:CDS
AAAATTCTTTCTTTAAGCTT+TGG 0.289874 3:-92503603 MsG0380017141.01.T01:three_prime_UTR
CCTCTTGATTCGCATCTTGC+TGG 0.308976 3:-92507268 MsG0380017141.01.T01:CDS
AAATTCTTTCTTTAAGCTTT+GGG 0.310231 3:-92503602 MsG0380017141.01.T01:three_prime_UTR
CGTTGTTCAACTACTCTTGA+TGG 0.331931 3:-92504334 MsG0380017141.01.T01:CDS
TGGCTCAGGCCTGCTGCTGC+AGG 0.332089 3:-92505096 MsG0380017141.01.T01:CDS
AAGTAAATGTATTAGTCTTA+TGG 0.334702 3:-92503648 MsG0380017141.01.T01:three_prime_UTR
TGATTGTTACCGCAGCCAAC+AGG 0.342727 3:-92505936 MsG0380017141.01.T01:CDS
GAGTTAATGGCATACCAATT+TGG 0.351396 3:-92504407 MsG0380017141.01.T01:CDS
TTAAAGAATGTTGCTGGAAA+TGG 0.353609 3:+92505163 None:intergenic
TTGAGCACCTTTACTATCAT+TGG 0.356584 3:+92507753 None:intergenic
AGGCCTGCTGCTGCAGGAAC+GGG 0.357983 3:-92505090 MsG0380017141.01.T01:CDS
GAAAATAAACTTCATTCAAC+AGG 0.360836 3:-92507865 MsG0380017141.01.T01:CDS
CCCTCTTTAGCTTGAGATCC+AGG 0.372198 3:+92504169 None:intergenic
TGGATGATAATAGGCTTTGT+AGG 0.375035 3:-92507699 MsG0380017141.01.T01:CDS
GCACCAGCTTCAAACCAAAT+TGG 0.375590 3:+92504393 None:intergenic
AACTGTAATGAAAATTTAAA+GGG 0.379683 3:+92503546 None:intergenic
GGTGATGGTTCTGTTGTTGT+TGG 0.380337 3:-92507541 MsG0380017141.01.T01:CDS
CAGGCCTGCTGCTGCAGGAA+CGG 0.383245 3:-92505091 MsG0380017141.01.T01:CDS
TGATAGTAAAGGTGCTCAAT+TGG 0.384390 3:-92507749 MsG0380017141.01.T01:CDS
GGGTTCCTTCTTTGGATTGG+AGG 0.390165 3:-92504149 MsG0380017141.01.T01:CDS
TGAGTACACCTGTGTTGAAT+TGG 0.391184 3:-92507618 MsG0380017141.01.T01:CDS
ACAGGTATGCTGAAACAAAA+AGG 0.395693 3:-92504210 MsG0380017141.01.T01:intron
AAGCTTAAGAGCTTTGAGTT+TGG 0.397722 3:+92508683 None:intergenic
AGATAAAGCTTAACGGCGTT+AGG 0.399449 3:+92508636 None:intergenic
TGGGAAAGTTCAGCGTGATA+TGG 0.402288 3:-92505988 MsG0380017141.01.T01:CDS
GTTACATCCACATTAGTAAC+AGG 0.405493 3:+92507439 None:intergenic
CACGCCAGTGAGAGCGAGTC+AGG 0.407606 3:-92508144 MsG0380017141.01.T01:CDS
GGATTGGAGGCTTCACTTGG+AGG 0.408465 3:-92504136 MsG0380017141.01.T01:CDS
CAGTGGTGTCCTGCTGTTGA+AGG 0.408562 3:+92505117 None:intergenic
TTTCAGTGCTTTGCTACAAC+TGG 0.410386 3:-92507562 MsG0380017141.01.T01:CDS
AAAACCGCCTTTCCTGGACT+TGG 0.418173 3:-92507466 MsG0380017141.01.T01:CDS
TTAATCAACAGCAATGTCAT+TGG 0.423067 3:-92505144 MsG0380017141.01.T01:CDS
CAACACAGGTGTACTCATAT+TGG 0.424208 3:+92507624 None:intergenic
TGACCGTCATGGAATAGTTC+AGG 0.425189 3:-92507665 MsG0380017141.01.T01:CDS
AGAGGGTTCCTTCTTTGGAT+TGG 0.425551 3:-92504152 MsG0380017141.01.T01:CDS
CACAGGGTCATCAGTTCTCT+AGG 0.426612 3:-92507594 MsG0380017141.01.T01:CDS
CAACTGGGATTCATGGAAAA+GGG 0.427004 3:-92508005 MsG0380017141.01.T01:CDS
TTTGGATTGGAGGCTTCACT+TGG 0.427397 3:-92504139 MsG0380017141.01.T01:CDS
TGATTCTCCTGAGGCTCCAT+TGG 0.428766 3:-92505825 MsG0380017141.01.T01:intron
CAGCAGCAGGCCTGAGCCAG+TGG 0.431308 3:+92505100 None:intergenic
TGTTGATTAAAGAATGTTGC+TGG 0.432156 3:+92505157 None:intergenic
GCAACTGGGATTCATGGAAA+AGG 0.436550 3:-92508006 MsG0380017141.01.T01:CDS
GTTGTGACTGAATGGAGATT+TGG 0.438659 3:-92507811 MsG0380017141.01.T01:CDS
GTTGTTGTTGGTTCTTTGGA+TGG 0.439449 3:-92507529 MsG0380017141.01.T01:CDS
GGTGACAGAGAACGGGAAAC+AGG 0.442816 3:-92506032 MsG0380017141.01.T01:CDS
CTCACTGGCGTGGCCGAACC+AGG 0.448366 3:+92508155 None:intergenic
CTTGCAATGGTAGCAATACT+TGG 0.449516 3:-92503795 MsG0380017141.01.T01:CDS
TCACTTGGAGGCTTAGAGCC+AGG 0.454641 3:-92504124 MsG0380017141.01.T01:CDS
GTTCTTTGGATGGAAAGATT+CGG 0.455797 3:-92507519 MsG0380017141.01.T01:CDS
CAAACTTGTCGTGCATAAAC+CGG 0.459612 3:+92505855 None:intergenic
GTCGTCAACGTCGAAGTTGG+TGG 0.460565 3:-92507956 MsG0380017141.01.T01:CDS
TACCAGTCTCAATATCAAAC+TGG 0.462015 3:+92507836 None:intergenic
GGGAACCACGGATACCTACT+TGG 0.466150 3:-92507395 MsG0380017141.01.T01:CDS
GGTCCTCTGCTAAATCCTCT+TGG 0.466721 3:-92503965 MsG0380017141.01.T01:CDS
ACTGCTACAAGATAGTTCTC+AGG 0.467624 3:-92505898 MsG0380017141.01.T01:CDS
TGTATTAGTCTTATGGAACT+TGG 0.467889 3:-92503641 MsG0380017141.01.T01:three_prime_UTR
CACCAGTTTGATATTGAGAC+TGG 0.469746 3:-92507838 MsG0380017141.01.T01:CDS
ACAGCGACCCACATGGCTCC+CGG 0.470053 3:-92505028 MsG0380017141.01.T01:CDS
CAGCAGGACACCACTGGCTC+AGG 0.472502 3:-92505110 MsG0380017141.01.T01:CDS
CAAGCTTAAAGTTTATGGTA+AGG 0.473983 3:-92508255 MsG0380017141.01.T01:CDS
GTTGTTCAACTACTCTTGAT+GGG 0.474147 3:-92504333 MsG0380017141.01.T01:CDS
ACATTAAAAGTGCTCGTGAA+TGG 0.476630 3:-92503931 MsG0380017141.01.T01:CDS
ACGTTCCATCAAGATAGGTC+GGG 0.483613 3:+92504995 None:intergenic
GATAAAGCTTAACGGCGTTA+GGG 0.483757 3:+92508637 None:intergenic
ACTCCCGTTCCTGCAGCAGC+AGG 0.483851 3:+92505087 None:intergenic
TTTGATGGAAAGTGGATTGT+GGG 0.483918 3:-92507415 MsG0380017141.01.T01:CDS
TGCTCCACAAGGTTATCAAT+TGG 0.488850 3:+92503738 None:intergenic
ATCGACTCATCAGCAACTTC+CGG 0.493994 3:+92508212 None:intergenic
GGGTTCGACCCACTTGGACT+TGG 0.499119 3:-92504854 MsG0380017141.01.T01:CDS
AGGTGCTCAATTGGATCCAT+CGG 0.499935 3:-92507740 MsG0380017141.01.T01:CDS
GAAACAGGAGCGACATATAG+TGG 0.501405 3:-92506017 MsG0380017141.01.T01:CDS
TTTGTTAAAACTCGTTGTGT+TGG 0.501731 3:-92508549 MsG0380017141.01.T01:CDS
TCCTGGATCTCAAGCTAAAG+AGG 0.502469 3:-92504170 MsG0380017141.01.T01:CDS
ACCTGTGTTGAATTGGGCAC+AGG 0.504500 3:-92507611 MsG0380017141.01.T01:CDS
AACTTTCAACAGGTCAAAGA+TGG 0.509696 3:-92505965 MsG0380017141.01.T01:CDS
TTCTATCAACTCTATGAGGC+AGG 0.509976 3:-92507491 MsG0380017141.01.T01:CDS
TAACTCAGGTGACAGAGAAC+GGG 0.510547 3:-92506039 MsG0380017141.01.T01:intron
CGTGATATGGAACTTTCAAC+AGG 0.512894 3:-92505975 MsG0380017141.01.T01:CDS
GTGGTATGTGCAAGCAGAGT+TGG 0.513095 3:-92504810 MsG0380017141.01.T01:intron
AAATCCTGACTCGCTCTCAC+TGG 0.514185 3:+92508140 None:intergenic
ATCAAGTCCCGGGAGCCATG+TGG 0.514514 3:+92505020 None:intergenic
GTTAAAACTCGTTGTGTTGG+TGG 0.515711 3:-92508546 MsG0380017141.01.T01:CDS
CTTCTCAAAGAGTCCTGGTT+CGG 0.515826 3:-92508168 MsG0380017141.01.T01:CDS
GATGTGAAGATAAAGCTTAA+CGG 0.516648 3:+92508629 None:intergenic
GCTATAACCAATGGAGCCTC+AGG 0.517226 3:+92505818 None:intergenic
TTTCAACAAATAGGTACCCT+GGG 0.517399 3:-92503988 MsG0380017141.01.T01:intron
CTGGTAAGGTTGTGACTGAA+TGG 0.518627 3:-92507819 MsG0380017141.01.T01:CDS
AGCAGCTCTTTAGACCCTGT+TGG 0.519333 3:+92505921 None:intergenic
ATGCAGCTACTTCGCGTCGC+AGG 0.521060 3:-92504429 MsG0380017141.01.T01:intron
CACTTGGAGGCTTAGAGCCA+GGG 0.521376 3:-92504123 MsG0380017141.01.T01:intron
TGAACAAAGTATCATGATGT+TGG 0.523991 3:+92503481 None:intergenic
GGGTTGAGCTTGAGCAACCT+TGG 0.528839 3:+92507289 None:intergenic
TCTTTAGACCCTGTTGGCTG+CGG 0.528936 3:+92505927 None:intergenic
GAGTACACCTGTGTTGAATT+GGG 0.529176 3:-92507617 MsG0380017141.01.T01:CDS
GATATCACCAATGATAGTAA+AGG 0.529897 3:-92507760 MsG0380017141.01.T01:CDS
GTAACAGGTGAACCAAGTCC+AGG 0.531965 3:+92507454 None:intergenic
CCCATCTTTATCGGTAAACA+CGG 0.532444 3:+92507360 None:intergenic
TGATAATAGGCTTTGTAGGT+GGG 0.532793 3:-92507695 MsG0380017141.01.T01:CDS
CAGCGACCCACATGGCTCCC+GGG 0.535164 3:-92505027 MsG0380017141.01.T01:CDS
TCAAGTCCCGGGAGCCATGT+GGG 0.535885 3:+92505021 None:intergenic
ACTAAGAACTAGAACTTGCA+AGG 0.536025 3:+92503679 None:intergenic
TGCTTTGCTACAACTGGTGA+TGG 0.537885 3:-92507556 MsG0380017141.01.T01:CDS
GTTTGATATTGAGACTGGTA+AGG 0.537909 3:-92507833 MsG0380017141.01.T01:CDS
ATGATAATAGGCTTTGTAGG+TGG 0.540329 3:-92507696 MsG0380017141.01.T01:CDS
TACGTTCCATCAAGATAGGT+CGG 0.542041 3:+92504994 None:intergenic
ATACCAATTTGGTTTGAAGC+TGG 0.542713 3:-92504396 MsG0380017141.01.T01:CDS
GTGGCGCTCACAGCCGCGAC+GGG 0.543026 3:-92508833 MsG0380017141.01.T01:CDS
TTCGTCGTCAACGTCGAAGT+TGG 0.543148 3:-92507959 MsG0380017141.01.T01:CDS
GGGTCGAACCCAAAATCTCC+AGG 0.547605 3:+92504866 None:intergenic
CATAAACCGGCTTTCAACGA+TGG 0.548519 3:+92505868 None:intergenic
CGTTCCATCAAGATAGGTCG+GGG 0.549545 3:+92504996 None:intergenic
TGTTACAGGGCGACTTGCAA+TGG 0.550979 3:-92503808 MsG0380017141.01.T01:intron
GGTGCTCAATTGGATCCATC+GGG 0.552449 3:-92507739 MsG0380017141.01.T01:CDS
GGCTTACGTTCCATCAAGAT+AGG 0.552815 3:+92504990 None:intergenic
AAGCTTAAAGAGATCAAGAA+TGG 0.555296 3:-92503908 MsG0380017141.01.T01:intron
ATGACTCCATCGTTGAAAGC+CGG 0.555694 3:-92505874 MsG0380017141.01.T01:CDS
TGCAGTCACTGATTCTCCTG+AGG 0.556545 3:-92505834 MsG0380017141.01.T01:CDS
CTTCAACAGCAGGACACCAC+TGG 0.557036 3:-92505116 MsG0380017141.01.T01:CDS
GGAATTGAGGAAGCTGCAAA+TGG 0.557267 3:-92508111 MsG0380017141.01.T01:intron
TGAAGCCTCCAATCCAAAGA+AGG 0.557622 3:+92504144 None:intergenic
GATAGCTTCTCAAAGAGTCC+TGG 0.557892 3:-92508173 MsG0380017141.01.T01:CDS
GGTGGCGCTCACAGCCGCGA+CGG 0.558055 3:-92508834 MsG0380017141.01.T01:CDS
GTAACTCAGGTGACAGAGAA+CGG 0.558922 3:-92506040 MsG0380017141.01.T01:intron
GTTTCAACAAATAGGTACCC+TGG 0.560016 3:-92503989 MsG0380017141.01.T01:intron
TGGGATATGCGTGACCGTCA+TGG 0.562375 3:-92507676 MsG0380017141.01.T01:CDS
TGGAGCATCTCTCAAATCCA+TGG 0.566001 3:-92503722 MsG0380017141.01.T01:CDS
AAGCTTTATCTTCACATCGG+TGG 0.566382 3:-92508624 MsG0380017141.01.T01:CDS
ACAGGGTCATCAGTTCTCTA+GGG 0.567805 3:-92507593 MsG0380017141.01.T01:CDS
CCGTGTTTACCGATAAAGAT+GGG 0.570042 3:-92507360 MsG0380017141.01.T01:CDS
TGGACTCATCAAAAGCATGC+TGG 0.574141 3:+92507894 None:intergenic
TTCTTTCTTTAAGCTTTGGG+AGG 0.576059 3:-92503599 MsG0380017141.01.T01:three_prime_UTR
TGTATTCTATCAACTCTATG+AGG 0.576757 3:-92507495 MsG0380017141.01.T01:CDS
TGGTGATGATGATGCTGATG+AGG 0.577578 3:-92508490 MsG0380017141.01.T01:CDS
GAATGGAGATTTGGTAAGGA+TGG 0.582473 3:-92507802 MsG0380017141.01.T01:CDS
CCTGTGTTGAATTGGGCACA+GGG 0.583531 3:-92507610 MsG0380017141.01.T01:CDS
ATTGGTAAACCTTCAACAGC+AGG 0.584446 3:-92505126 MsG0380017141.01.T01:CDS
CAGCACAACAGCGACCCACA+TGG 0.585644 3:-92505035 MsG0380017141.01.T01:CDS
GACTGAATGGAGATTTGGTA+AGG 0.586216 3:-92507806 MsG0380017141.01.T01:CDS
CCTGGATCTCAAGCTAAAGA+GGG 0.589518 3:-92504169 MsG0380017141.01.T01:CDS
AGGTGAACCAAGTCCAGGAA+AGG 0.590450 3:+92507459 None:intergenic
GAAATAATATTGCTGCTCCA+AGG 0.591970 3:-92507306 MsG0380017141.01.T01:CDS
TGGTTCACCTGTTACTAATG+TGG 0.593720 3:-92507446 MsG0380017141.01.T01:CDS
CCAAGAAAAGTTGAACCCGA+TGG 0.594621 3:+92507724 None:intergenic
CTGCTACAAGATAGTTCTCA+GGG 0.595736 3:-92505897 MsG0380017141.01.T01:CDS
CGACCCACTTGGACTTGGAG+AGG 0.600286 3:-92504849 MsG0380017141.01.T01:CDS
AAATACGAGTTTGCAAACAC+AGG 0.603268 3:-92504366 MsG0380017141.01.T01:CDS
AACTGGGATTCATGGAAAAG+GGG 0.604100 3:-92508004 MsG0380017141.01.T01:CDS
GGTGATGATGATGCTGATGA+GGG 0.605562 3:-92508489 MsG0380017141.01.T01:intron
CAAGCTTCAGTGACTCATGT+TGG 0.608285 3:-92503762 MsG0380017141.01.T01:CDS
ACCGTGTTTACCGATAAAGA+TGG 0.608326 3:-92507361 MsG0380017141.01.T01:CDS
AGGATCCTGAAAGCTTAAAG+TGG 0.613738 3:-92504829 MsG0380017141.01.T01:CDS
GCGACATATAGTGGCTACTG+TGG 0.614582 3:-92506008 MsG0380017141.01.T01:CDS
GATTGTTACCGCAGCCAACA+GGG 0.615563 3:-92505935 MsG0380017141.01.T01:CDS
CTGACTCGCTCTCACTGGCG+TGG 0.617306 3:+92508145 None:intergenic
TTGTTCAACTACTCTTGATG+GGG 0.618405 3:-92504332 MsG0380017141.01.T01:intron
AACAACCAAGTAGGTATCCG+TGG 0.621225 3:+92507390 None:intergenic
GTTAAGCTTTATCTTCACAT+CGG 0.621435 3:-92508627 MsG0380017141.01.T01:CDS
GACGAAGATGAAGAAGAAGA+TGG 0.623172 3:-92508510 MsG0380017141.01.T01:CDS
TCAACTTCATCTACAGATGA+CGG 0.624942 3:+92508708 None:intergenic
CCAGCAAGATGCGAATCAAG+AGG 0.625035 3:+92507268 None:intergenic
CCCTGTGCCCAATTCAACAC+AGG 0.635628 3:+92507610 None:intergenic
CAGCAAGATGCGAATCAAGA+GGG 0.636555 3:+92507269 None:intergenic
GGTACAGATAACAACCAAGT+AGG 0.636628 3:+92507381 None:intergenic
AACTTTCGAGTAACCCGTCG+CGG 0.640215 3:+92508820 None:intergenic
CGACATATAGTGGCTACTGT+GGG 0.641076 3:-92506007 MsG0380017141.01.T01:CDS
AATACGAGTTTGCAAACACA+GGG 0.642518 3:-92504365 MsG0380017141.01.T01:CDS
CTAAGAACTAGAACTTGCAA+GGG 0.646168 3:+92503680 None:intergenic
GCACAAATTTGTTTATAACG+TGG 0.647469 3:+92505060 None:intergenic
ATGTCTTTAGCTAGGCCAAG+AGG 0.649507 3:+92503950 None:intergenic
TGAACCAAGTCCAGGAAAGG+CGG 0.656718 3:+92507462 None:intergenic
GGATCCTCTCCAAGTCCAAG+TGG 0.657850 3:+92504845 None:intergenic
AAAGTGGATTGTGGGAACCA+CGG 0.666086 3:-92507407 MsG0380017141.01.T01:CDS
AGCGGATAATTAGAGAACAA+TGG 0.668449 3:-92505214 MsG0380017141.01.T01:intron
GATTTGAGAGATGCTCCACA+AGG 0.672076 3:+92503727 None:intergenic
AACTACGAAGATGCAAACGA+AGG 0.673113 3:-92508759 MsG0380017141.01.T01:CDS
TGGACCAATTGATAACCTTG+TGG 0.673898 3:-92503742 MsG0380017141.01.T01:CDS
AAAATAAACTTCATTCAACA+GGG 0.674447 3:-92507864 MsG0380017141.01.T01:CDS
GATCCTCTCCAAGTCCAAGT+GGG 0.674722 3:+92504846 None:intergenic
TCATGATACTTTGTTCACTG+TGG 0.678659 3:-92503475 MsG0380017141.01.T01:three_prime_UTR
AGGCCAAGAGGATTTAGCAG+AGG 0.679125 3:+92503962 None:intergenic
AGTTGCTGATGAGTCGATGT+GGG 0.683396 3:-92508207 MsG0380017141.01.T01:CDS
GATCCTGAACTATTCCATGA+CGG 0.683919 3:+92507662 None:intergenic
TTCAACAAATAGGTACCCTG+GGG 0.698699 3:-92503987 MsG0380017141.01.T01:intron
AAGTTGCTGATGAGTCGATG+TGG 0.703498 3:-92508208 MsG0380017141.01.T01:CDS
CAGGGTCATCAGTTCTCTAG+GGG 0.709385 3:-92507592 MsG0380017141.01.T01:CDS
AGGGTCATCAGTTCTCTAGG+GGG 0.723930 3:-92507591 MsG0380017141.01.T01:CDS
GTTCCATCAAGATAGGTCGG+GGG 0.742215 3:+92504997 None:intergenic
TCAACAAATAGGTACCCTGG+GGG 0.781200 3:-92503986 MsG0380017141.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAACGTAAATTTTATAAA+AGG + Chr3:92506749-92506768 None:intergenic 10.0%
!!! TTTGAATATGAAATTTTAAA+AGG - Chr3:92506851-92506870 MsG0380017141.01.T01:intron 10.0%
!! AAACTTTGATTATATATATG+CGG + Chr3:92507639-92507658 None:intergenic 15.0%
!! AAATAAGAGGTAAAATTATT+AGG + Chr3:92505476-92505495 None:intergenic 15.0%
!! AACTGTAATGAAAATTTAAA+GGG + Chr3:92508737-92508756 None:intergenic 15.0%
!!! AAAGAAAGAATTTTGTTTTA+TGG + Chr3:92508671-92508690 None:intergenic 15.0%
!!! ACATTACTATTGATAATATT+GGG - Chr3:92505400-92505419 MsG0380017141.01.T01:intron 15.0%
!!! ATAATCAAAGTTTTGAATAA+AGG - Chr3:92507646-92507665 MsG0380017141.01.T01:CDS 15.0%
!!! TACATTACTATTGATAATAT+TGG - Chr3:92505399-92505418 MsG0380017141.01.T01:intron 15.0%
!!! TATGTTTTCTATATCATTAT+AGG - Chr3:92508020-92508039 MsG0380017141.01.T01:CDS 15.0%
!!! TTATAATGAATTTAACTTCT+TGG - Chr3:92506218-92506237 MsG0380017141.01.T01:intron 15.0%
!! AAAATAAACTTCATTCAACA+GGG - Chr3:92504416-92504435 MsG0380017141.01.T01:CDS 20.0%
!! AAAATTCTTTCTTTAAGCTT+TGG - Chr3:92508677-92508696 MsG0380017141.01.T01:CDS 20.0%
!! AAATTATTAGGTGAAAACAT+AGG + Chr3:92505464-92505483 None:intergenic 20.0%
!! AAATTCTTTCTTTAAGCTTT+GGG - Chr3:92508678-92508697 MsG0380017141.01.T01:CDS 20.0%
!! AAGATACTTTCTTTAGATAA+TGG + Chr3:92505204-92505223 None:intergenic 20.0%
!! AGATACTTTCTTTAGATAAT+GGG + Chr3:92505203-92505222 None:intergenic 20.0%
!! GAACTGTAATGAAAATTTAA+AGG + Chr3:92508738-92508757 None:intergenic 20.0%
!! TCAAATTGTACTAGTATATT+TGG - Chr3:92506684-92506703 MsG0380017141.01.T01:intron 20.0%
!! TTTATAAAAGGTAGAATTCT+GGG + Chr3:92506737-92506756 None:intergenic 20.0%
!!! AAAACAGAGATTTTATAGTT+TGG - Chr3:92506086-92506105 MsG0380017141.01.T01:intron 20.0%
!!! AAACTGTATTTTAGAAAGAA+GGG + Chr3:92505853-92505872 None:intergenic 20.0%
!!! AACATAATGGTTTTATATTG+AGG - Chr3:92507697-92507716 MsG0380017141.01.T01:CDS 20.0%
!!! AAGTAAATGTATTAGTCTTA+TGG - Chr3:92508632-92508651 MsG0380017141.01.T01:CDS 20.0%
!!! ATAATCTTGTTTCAACAAAT+AGG - Chr3:92508283-92508302 MsG0380017141.01.T01:CDS 20.0%
!!! ATTTAAAATCATGTATACGA+TGG - Chr3:92507800-92507819 MsG0380017141.01.T01:CDS 20.0%
!!! ATTTAAAGGGAAAACATTTT+AGG + Chr3:92508724-92508743 None:intergenic 20.0%
!!! GTATACATGATTTTAAATAG+CGG + Chr3:92507798-92507817 None:intergenic 20.0%
!!! TAAACTGTATTTTAGAAAGA+AGG + Chr3:92505854-92505873 None:intergenic 20.0%
!!! TGAAAATTGGTTCAAAAATT+AGG - Chr3:92503824-92503843 MsG0380017141.01.T01:intron 20.0%
!!! TTTAAAGGGAAAACATTTTA+GGG + Chr3:92508723-92508742 None:intergenic 20.0%
!!! TTTGAAATTATGTTCTGTAT+TGG - Chr3:92505591-92505610 MsG0380017141.01.T01:intron 20.0%
!!! TTTTATAAAAGGTAGAATTC+TGG + Chr3:92506738-92506757 None:intergenic 20.0%
! AAAACAAAGATGAGAAATCA+TGG + Chr3:92506959-92506978 None:intergenic 25.0%
! AAACAAAGATGAGAAATCAT+GGG + Chr3:92506958-92506977 None:intergenic 25.0%
! AAAGATGGGAAAACTAAAAA+TGG - Chr3:92504934-92504953 MsG0380017141.01.T01:intron 25.0%
! AATACAGTTTAGTCATCTTA+AGG - Chr3:92505863-92505882 MsG0380017141.01.T01:CDS 25.0%
! ACAACATAATAATACGTATG+TGG - Chr3:92506993-92507012 MsG0380017141.01.T01:intron 25.0%
! ACGAAGAAAAAAGAAAAACA+CGG + Chr3:92508234-92508253 None:intergenic 25.0%
! ACTATAAACCGATAAGATTA+CGG + Chr3:92506043-92506062 None:intergenic 25.0%
! CTCAATATAAAAAACGTTAC+TGG + Chr3:92507589-92507608 None:intergenic 25.0%
! GAAAATAAACTTCATTCAAC+AGG - Chr3:92504415-92504434 MsG0380017141.01.T01:CDS 25.0%
! GTCTTGTAAATTAAGAATGA+TGG - Chr3:92505119-92505138 MsG0380017141.01.T01:CDS 25.0%
! TCAAAAATTAGGTCAAAAGT+TGG - Chr3:92503835-92503854 MsG0380017141.01.T01:intron 25.0%
! TCAAGTTATAGTAACGTTAA+GGG - Chr3:92507375-92507394 MsG0380017141.01.T01:CDS 25.0%
! TGTACTATGTAGAATGTTTA+AGG - Chr3:92506622-92506641 MsG0380017141.01.T01:intron 25.0%
!! ATTTTCTTCGTATTCTTCAT+CGG + Chr3:92503486-92503505 None:intergenic 25.0%
!! CATAGATTGATAACAAGTTT+AGG + Chr3:92507834-92507853 None:intergenic 25.0%
!! CTATTGACATCTTATTTGAA+TGG - Chr3:92505921-92505940 MsG0380017141.01.T01:CDS 25.0%
!! TAATTTCATTTTGCGAATTG+AGG - Chr3:92505519-92505538 MsG0380017141.01.T01:intron 25.0%
!! TTCAAGTTATAGTAACGTTA+AGG - Chr3:92507374-92507393 MsG0380017141.01.T01:CDS 25.0%
!! TTTATGGTAAGGATTTTCTT+GGG - Chr3:92504036-92504055 MsG0380017141.01.T01:intron 25.0%
!!! AAAACTAAAAATGGTTTTGC+TGG - Chr3:92504943-92504962 MsG0380017141.01.T01:intron 25.0%
!!! AACTGTATTTTAGAAAGAAG+GGG + Chr3:92505852-92505871 None:intergenic 25.0%
!!! TAATGGTTTTATATTGAGGT+TGG - Chr3:92507701-92507720 MsG0380017141.01.T01:CDS 25.0%
!!! TGAATAATAGTTTTATGCCA+TGG + Chr3:92508578-92508597 None:intergenic 25.0%
!!! TGGCATTTTAAGATGAATTT+AGG + Chr3:92507340-92507359 None:intergenic 25.0%
!!! TTTAGTTTTCCCATCTTTAT+CGG + Chr3:92504932-92504951 None:intergenic 25.0%
AAAATTAGGTCAAAAGTTGG+TGG - Chr3:92503838-92503857 MsG0380017141.01.T01:intron 30.0%
AAGAACAATACAGCAAGTTA+TGG + Chr3:92505500-92505519 None:intergenic 30.0%
AAGCTTAAAGAGATCAAGAA+TGG - Chr3:92508372-92508391 MsG0380017141.01.T01:intron 30.0%
AGCAAGTTATGGAAAATAAG+AGG + Chr3:92505489-92505508 None:intergenic 30.0%
AGTTGCAAATATCTTGTTAC+AGG - Chr3:92508458-92508477 MsG0380017141.01.T01:intron 30.0%
ATAATGCAATGCTATTGATG+TGG + Chr3:92505374-92505393 None:intergenic 30.0%
CAAGCTTAAAGTTTATGGTA+AGG - Chr3:92504025-92504044 MsG0380017141.01.T01:intron 30.0%
CTTAATTTACAAGACAACAG+TGG + Chr3:92505114-92505133 None:intergenic 30.0%
GAGAACAAGCTTAAAGTTTA+TGG - Chr3:92504020-92504039 MsG0380017141.01.T01:intron 30.0%
GATATCACCAATGATAGTAA+AGG - Chr3:92504520-92504539 MsG0380017141.01.T01:intron 30.0%
GATGTGAAGATAAAGCTTAA+CGG + Chr3:92503654-92503673 None:intergenic 30.0%
GTTGCAAATATCTTGTTACA+GGG - Chr3:92508459-92508478 MsG0380017141.01.T01:intron 30.0%
TAGTGAGTGAAGAAATTGAT+GGG + Chr3:92505717-92505736 None:intergenic 30.0%
TCAATGCATGATAGCATATT+TGG + Chr3:92505566-92505585 None:intergenic 30.0%
TGAATGAGCTAACTTTCATT+GGG + Chr3:92506491-92506510 None:intergenic 30.0%
TGATCTAAACTGCAACATAA+TGG - Chr3:92507684-92507703 MsG0380017141.01.T01:CDS 30.0%
TGTATTCTATCAACTCTATG+AGG - Chr3:92504785-92504804 MsG0380017141.01.T01:intron 30.0%
TTAAAGAATGTTGCTGGAAA+TGG + Chr3:92507120-92507139 None:intergenic 30.0%
TTAATCAACAGCAATGTCAT+TGG - Chr3:92507136-92507155 MsG0380017141.01.T01:intron 30.0%
TTAGTGAGTGAAGAAATTGA+TGG + Chr3:92505718-92505737 None:intergenic 30.0%
TTATTAACTTTCACTTGCAC+AGG - Chr3:92508052-92508071 MsG0380017141.01.T01:intron 30.0%
TTTGTTAAAACTCGTTGTGT+TGG - Chr3:92503731-92503750 MsG0380017141.01.T01:CDS 30.0%
! AATGTGGATGTAACTTTTGA+TGG - Chr3:92504850-92504869 MsG0380017141.01.T01:CDS 30.0%
! AATGTTTAAGGTGTAGTTGA+TGG - Chr3:92506634-92506653 MsG0380017141.01.T01:intron 30.0%
! ATGTAACTTTTGATGGAAAG+TGG - Chr3:92504857-92504876 MsG0380017141.01.T01:CDS 30.0%
! ATGTTTAAGGTGTAGTTGAT+GGG - Chr3:92506635-92506654 MsG0380017141.01.T01:intron 30.0%
! ATTTAACTTCTTGGTAACTC+AGG - Chr3:92506227-92506246 MsG0380017141.01.T01:intron 30.0%
! CACTTTTAATGTCTTTAGCT+AGG + Chr3:92508341-92508360 None:intergenic 30.0%
! GCACAAATTTGTTTATAACG+TGG + Chr3:92507223-92507242 None:intergenic 30.0%
! GTTAAGCTTTATCTTCACAT+CGG - Chr3:92503653-92503672 MsG0380017141.01.T01:three_prime_UTR 30.0%
! GTTTATGGTAAGGATTTTCT+TGG - Chr3:92504035-92504054 MsG0380017141.01.T01:intron 30.0%
! GTTTTATATTGAGGTTGGAT+TGG - Chr3:92507706-92507725 MsG0380017141.01.T01:CDS 30.0%
! TATGCTGTAACATGTGTTTT+CGG - Chr3:92505223-92505242 MsG0380017141.01.T01:intron 30.0%
! TGAACAAAGTATCATGATGT+TGG + Chr3:92508802-92508821 None:intergenic 30.0%
! TGTTGATTAAAGAATGTTGC+TGG + Chr3:92507126-92507145 None:intergenic 30.0%
! TTCTTGGATTGGATGATAAT+AGG - Chr3:92504572-92504591 MsG0380017141.01.T01:intron 30.0%
! TTGTGAAGAATTTTGCAACT+GGG - Chr3:92504260-92504279 MsG0380017141.01.T01:intron 30.0%
!! AAACAATTGATTTGTAGTCC+CGG - Chr3:92507037-92507056 MsG0380017141.01.T01:intron 30.0%
!! ACTGTATTTTAGAAAGAAGG+GGG + Chr3:92505851-92505870 None:intergenic 30.0%
!! GTAATCTTATCGGTTTATAG+TGG - Chr3:92506042-92506061 MsG0380017141.01.T01:intron 30.0%
!! TGAAGTTTATTTTCACCCAA+TGG + Chr3:92504409-92504428 None:intergenic 30.0%
!! TGTATTAGTCTTATGGAACT+TGG - Chr3:92508639-92508658 MsG0380017141.01.T01:CDS 30.0%
AAACCGATAAGATTACGGAT+TGG + Chr3:92506038-92506057 None:intergenic 35.0%
AAATACGAGTTTGCAAACAC+AGG - Chr3:92507914-92507933 MsG0380017141.01.T01:CDS 35.0%
AACAGACACAATCAAATTGC+AGG + Chr3:92506131-92506150 None:intergenic 35.0%
AACCATCATAGCGTTAAACA+AGG + Chr3:92506790-92506809 None:intergenic 35.0%
AACTTTCAACAGGTCAAAGA+TGG - Chr3:92506315-92506334 MsG0380017141.01.T01:intron 35.0%
AATACGAGTTTGCAAACACA+GGG - Chr3:92507915-92507934 MsG0380017141.01.T01:CDS 35.0%
ACAGGTATGCTGAAACAAAA+AGG - Chr3:92508070-92508089 MsG0380017141.01.T01:intron 35.0%
ACATACCACTTTAAGCTTTC+AGG + Chr3:92507459-92507478 None:intergenic 35.0%
ACTAAGAACTAGAACTTGCA+AGG + Chr3:92508604-92508623 None:intergenic 35.0%
AGCGGATAATTAGAGAACAA+TGG - Chr3:92507066-92507085 MsG0380017141.01.T01:intron 35.0%
AGTCCAATCCGTAATCTTAT+CGG - Chr3:92506032-92506051 MsG0380017141.01.T01:CDS 35.0%
AGTGAGTGAAGAAATTGATG+GGG + Chr3:92505716-92505735 None:intergenic 35.0%
ATAGAAATATCCCAGAGTCT+TGG - Chr3:92505676-92505695 MsG0380017141.01.T01:intron 35.0%
CAATGCATGTGTTAGGTTTA+GGG + Chr3:92505893-92505912 None:intergenic 35.0%
CTAAGAACTAGAACTTGCAA+GGG + Chr3:92508603-92508622 None:intergenic 35.0%
CTGAATGAGCTAACTTTCAT+TGG + Chr3:92506492-92506511 None:intergenic 35.0%
GAAAGTTCAATGCATGTGTT+AGG + Chr3:92505900-92505919 None:intergenic 35.0%
GAAATAATATTGCTGCTCCA+AGG - Chr3:92504974-92504993 MsG0380017141.01.T01:intron 35.0%
GAATGAGCTAACTTTCATTG+GGG + Chr3:92506490-92506509 None:intergenic 35.0%
GAGAAAAACAAAAGAGAAGC+AGG + Chr3:92505743-92505762 None:intergenic 35.0%
GAGTTAATGGCATACCAATT+TGG - Chr3:92507873-92507892 MsG0380017141.01.T01:CDS 35.0%
GATGAAATTCTTTACGGAAC+AGG - Chr3:92503926-92503945 MsG0380017141.01.T01:CDS 35.0%
GTTACATCCACATTAGTAAC+AGG + Chr3:92504844-92504863 None:intergenic 35.0%
GTTCTTTGGATGGAAAGATT+CGG - Chr3:92504761-92504780 MsG0380017141.01.T01:intron 35.0%
GTTGTTCAACTACTCTTGAT+GGG - Chr3:92507947-92507966 MsG0380017141.01.T01:CDS 35.0%
GTTTGATATTGAGACTGGTA+AGG - Chr3:92504447-92504466 MsG0380017141.01.T01:intron 35.0%
TACCAGTCTCAATATCAAAC+TGG + Chr3:92504447-92504466 None:intergenic 35.0%
TCAACTTCATCTACAGATGA+CGG + Chr3:92503575-92503594 None:intergenic 35.0%
TCAATGCATGTGTTAGGTTT+AGG + Chr3:92505894-92505913 None:intergenic 35.0%
TCACAATTGTAAGCTAGTTG+AGG - Chr3:92508257-92508276 MsG0380017141.01.T01:CDS 35.0%
TCATGATACTTTGTTCACTG+TGG - Chr3:92508805-92508824 MsG0380017141.01.T01:CDS 35.0%
TGATAGCATATTTGGCTAAC+AGG + Chr3:92505558-92505577 None:intergenic 35.0%
TGCAACTATGAAAACAAGCT+TGG + Chr3:92508445-92508464 None:intergenic 35.0%
TTGAGCACCTTTACTATCAT+TGG + Chr3:92504530-92504549 None:intergenic 35.0%
TTGCATCTTCTGTATTCTTG+TGG - Chr3:92506186-92506205 MsG0380017141.01.T01:intron 35.0%
TTGGGCGATGAAATTCTTTA+CGG - Chr3:92503920-92503939 MsG0380017141.01.T01:CDS 35.0%
TTGTTCAACTACTCTTGATG+GGG - Chr3:92507948-92507967 MsG0380017141.01.T01:CDS 35.0%
TTGTTTAACGCTATGATGGT+TGG - Chr3:92506789-92506808 MsG0380017141.01.T01:intron 35.0%
TTTCAACAAATAGGTACCCT+GGG - Chr3:92508292-92508311 MsG0380017141.01.T01:CDS 35.0%
! AAAGGGGCTTTTGTTAACTT+TGG - Chr3:92504292-92504311 MsG0380017141.01.T01:intron 35.0%
! AAATTACCCATTTTGCGTTG+GGG + Chr3:92503688-92503707 None:intergenic 35.0%
! AATTTTGCAACTGGGATTCA+TGG - Chr3:92504268-92504287 MsG0380017141.01.T01:intron 35.0%
! AGAAATTACCCATTTTGCGT+TGG + Chr3:92503690-92503709 None:intergenic 35.0%
! ATGATAATAGGCTTTGTAGG+TGG - Chr3:92504584-92504603 MsG0380017141.01.T01:intron 35.0%
! ATGCTGTAACATGTGTTTTC+GGG - Chr3:92505224-92505243 MsG0380017141.01.T01:intron 35.0%
! ATGCTTTTGATGAGTCCATT+GGG - Chr3:92504391-92504410 MsG0380017141.01.T01:CDS 35.0%
! GAAATTACCCATTTTGCGTT+GGG + Chr3:92503689-92503708 None:intergenic 35.0%
! GTTGTGAAGAATTTTGCAAC+TGG - Chr3:92504259-92504278 MsG0380017141.01.T01:intron 35.0%
! TACATGGATTTTGTTAGTCC+TGG - Chr3:92508093-92508112 MsG0380017141.01.T01:intron 35.0%
! TGATAATAGGCTTTGTAGGT+GGG - Chr3:92504585-92504604 MsG0380017141.01.T01:intron 35.0%
! TGCTGAAACAAAAAGGTACA+TGG - Chr3:92508077-92508096 MsG0380017141.01.T01:intron 35.0%
! TGGATGATAATAGGCTTTGT+AGG - Chr3:92504581-92504600 MsG0380017141.01.T01:intron 35.0%
! TGTTTAAGGTGTAGTTGATG+GGG - Chr3:92506636-92506655 MsG0380017141.01.T01:intron 35.0%
!! AAATGGTTTTGCTGGTAGAA+TGG - Chr3:92504951-92504970 MsG0380017141.01.T01:intron 35.0%
!! AACAATTGATTTGTAGTCCC+GGG - Chr3:92507038-92507057 MsG0380017141.01.T01:intron 35.0%
!! AACACATTTTTCAGCAGATG+TGG + Chr3:92506160-92506179 None:intergenic 35.0%
!! AAGCTTAAGAGCTTTGAGTT+TGG + Chr3:92503600-92503619 None:intergenic 35.0%
!! AATGGTTTTGCTGGTAGAAT+GGG - Chr3:92504952-92504971 MsG0380017141.01.T01:intron 35.0%
!! ACATTAAAAGTGCTCGTGAA+TGG - Chr3:92508349-92508368 MsG0380017141.01.T01:intron 35.0%
!! AGTTTCTTGGTTGGTGAAAA+TGG - Chr3:92504229-92504248 MsG0380017141.01.T01:intron 35.0%
!! ATACCAATTTGGTTTGAAGC+TGG - Chr3:92507884-92507903 MsG0380017141.01.T01:CDS 35.0%
!! GTACTTTTGAGAATACGCAT+GGG - Chr3:92503982-92504001 MsG0380017141.01.T01:intron 35.0%
!! TCTTGTATCGATTCAGTAGA+TGG - Chr3:92505431-92505450 MsG0380017141.01.T01:intron 35.0%
!! TGATAGTAAAGGTGCTCAAT+TGG - Chr3:92504531-92504550 MsG0380017141.01.T01:intron 35.0%
!! TGTACTTTTGAGAATACGCA+TGG - Chr3:92503981-92504000 MsG0380017141.01.T01:intron 35.0%
!! TTCTGTTGTTGTTGGTTCTT+TGG - Chr3:92504747-92504766 MsG0380017141.01.T01:intron 35.0%
!! TTCTTTCTTTAAGCTTTGGG+AGG - Chr3:92508681-92508700 MsG0380017141.01.T01:CDS 35.0%
!! TTTGATGGAAAGTGGATTGT+GGG - Chr3:92504865-92504884 MsG0380017141.01.T01:CDS 35.0%
!!! ATTTTATCGCGAAAGGTGTT+TGG - Chr3:92503901-92503920 MsG0380017141.01.T01:intron 35.0%
!!! GGGTTTTGGGTTTTGAAAAT+TGG - Chr3:92503811-92503830 MsG0380017141.01.T01:intron 35.0%
!!! TTCATGAGAAGCGTTTTCTT+AGG + Chr3:92504358-92504377 None:intergenic 35.0%
!!! TTTTATCGCGAAAGGTGTTT+GGG - Chr3:92503902-92503921 MsG0380017141.01.T01:intron 35.0%
!!! TTTTGATGGAAAGTGGATTG+TGG - Chr3:92504864-92504883 MsG0380017141.01.T01:CDS 35.0%
AAAGGTCCGCAGAAACTAAA+AGG - Chr3:92506869-92506888 MsG0380017141.01.T01:intron 40.0%
AACTACGAAGATGCAAACGA+AGG - Chr3:92503521-92503540 MsG0380017141.01.T01:three_prime_UTR 40.0%
AACTGGGATTCATGGAAAAG+GGG - Chr3:92504276-92504295 MsG0380017141.01.T01:intron 40.0%
AAGGTCCGCAGAAACTAAAA+GGG - Chr3:92506870-92506889 MsG0380017141.01.T01:intron 40.0%
ACCGTGTTTACCGATAAAGA+TGG - Chr3:92504919-92504938 MsG0380017141.01.T01:intron 40.0%
ACTGCTACAAGATAGTTCTC+AGG - Chr3:92506382-92506401 MsG0380017141.01.T01:intron 40.0%
ACTTATCCAGTGAGATCAGA+TGG + Chr3:92506932-92506951 None:intergenic 40.0%
AGAAACTAAAAGGGATGTGG+AGG - Chr3:92506879-92506898 MsG0380017141.01.T01:intron 40.0%
AGATAAAGCTTAACGGCGTT+AGG + Chr3:92503647-92503666 None:intergenic 40.0%
AGGATCCTGAAAGCTTAAAG+TGG - Chr3:92507451-92507470 MsG0380017141.01.T01:CDS 40.0%
ATCTGATCTCACTGGATAAG+TGG - Chr3:92506931-92506950 MsG0380017141.01.T01:intron 40.0%
ATTGGGGTAGCTATAACCAA+TGG + Chr3:92506474-92506493 None:intergenic 40.0%
ATTGGTAAACCTTCAACAGC+AGG - Chr3:92507154-92507173 MsG0380017141.01.T01:intron 40.0%
CAAACTTGTCGTGCATAAAC+CGG + Chr3:92506428-92506447 None:intergenic 40.0%
CAACACAGGTGTACTCATAT+TGG + Chr3:92504659-92504678 None:intergenic 40.0%
CAACTGGGATTCATGGAAAA+GGG - Chr3:92504275-92504294 MsG0380017141.01.T01:intron 40.0%
CACCAGTTTGATATTGAGAC+TGG - Chr3:92504442-92504461 MsG0380017141.01.T01:intron 40.0%
CCCATCTTTATCGGTAAACA+CGG + Chr3:92504923-92504942 None:intergenic 40.0%
CCGTGTTTACCGATAAAGAT+GGG - Chr3:92504920-92504939 MsG0380017141.01.T01:intron 40.0%
CGTGATATGGAACTTTCAAC+AGG - Chr3:92506305-92506324 MsG0380017141.01.T01:intron 40.0%
CGTTGTTCAACTACTCTTGA+TGG - Chr3:92507946-92507965 MsG0380017141.01.T01:CDS 40.0%
CTGCTACAAGATAGTTCTCA+GGG - Chr3:92506383-92506402 MsG0380017141.01.T01:intron 40.0%
CTGGATAACAGTTTCTTGGT+TGG - Chr3:92504220-92504239 MsG0380017141.01.T01:intron 40.0%
CTTGAAAAGAGAACTAGCAC+TGG + Chr3:92507360-92507379 None:intergenic 40.0%
CTTGAAAGCAAGCACATAGA+AGG + Chr3:92506825-92506844 None:intergenic 40.0%
CTTGCAATGGTAGCAATACT+TGG - Chr3:92508485-92508504 MsG0380017141.01.T01:intron 40.0%
GAACTCAAATCAGCTACCTA+CGG - Chr3:92506658-92506677 MsG0380017141.01.T01:intron 40.0%
GACGAAGATGAAGAAGAAGA+TGG - Chr3:92503770-92503789 MsG0380017141.01.T01:CDS 40.0%
GAGTACACCTGTGTTGAATT+GGG - Chr3:92504663-92504682 MsG0380017141.01.T01:intron 40.0%
GATAAAGCTTAACGGCGTTA+GGG + Chr3:92503646-92503665 None:intergenic 40.0%
GATCCTGAACTATTCCATGA+CGG + Chr3:92504621-92504640 None:intergenic 40.0%
GGTACAGATAACAACCAAGT+AGG + Chr3:92504902-92504921 None:intergenic 40.0%
GTGAGTGAAGAAATTGATGG+GGG + Chr3:92505715-92505734 None:intergenic 40.0%
GTGTGTGTTTGTACGGTTAT+CGG + Chr3:92508194-92508213 None:intergenic 40.0%
GTTAAAACTCGTTGTGTTGG+TGG - Chr3:92503734-92503753 MsG0380017141.01.T01:CDS 40.0%
GTTGTGACTGAATGGAGATT+TGG - Chr3:92504469-92504488 MsG0380017141.01.T01:intron 40.0%
GTTTCAACAAATAGGTACCC+TGG - Chr3:92508291-92508310 MsG0380017141.01.T01:CDS 40.0%
GTTTGTACGGTTATCGGAAA+TGG + Chr3:92508188-92508207 None:intergenic 40.0%
TAATTCCCCCAACGCAAAAT+GGG - Chr3:92503679-92503698 MsG0380017141.01.T01:exon 40.0%
TACGTTCCATCAAGATAGGT+CGG + Chr3:92507289-92507308 None:intergenic 40.0%
TAGAGAATCACAGCCAAACA+TGG + Chr3:92507732-92507751 None:intergenic 40.0%
TAGCCTAAAGGTGGTAGAAA+GGG + Chr3:92505786-92505805 None:intergenic 40.0%
TAGTACAATTTGACAGCCGT+AGG + Chr3:92506677-92506696 None:intergenic 40.0%
TATCGGAAATGGAAATACCC+TGG + Chr3:92508177-92508196 None:intergenic 40.0%
TCAACTCATCAACCAGAAGT+TGG + Chr3:92507995-92508014 None:intergenic 40.0%
TCTGATCTCACTGGATAAGT+GGG - Chr3:92506932-92506951 MsG0380017141.01.T01:intron 40.0%
TGAGTACACCTGTGTTGAAT+TGG - Chr3:92504662-92504681 MsG0380017141.01.T01:intron 40.0%
TGCACAAGTGTGTGTTTGTA+CGG + Chr3:92508201-92508220 None:intergenic 40.0%
TGCTCCACAAGGTTATCAAT+TGG + Chr3:92508545-92508564 None:intergenic 40.0%
TGGTTCACCTGTTACTAATG+TGG - Chr3:92504834-92504853 MsG0380017141.01.T01:CDS 40.0%
TGTTGTAAGCTAACGCTTGT+TGG - Chr3:92506710-92506729 MsG0380017141.01.T01:intron 40.0%
TTAGGAGTCAAAATGCAGAG+AGG + Chr3:92507322-92507341 None:intergenic 40.0%
TTCAACAAATAGGTACCCTG+GGG - Chr3:92508293-92508312 MsG0380017141.01.T01:CDS 40.0%
TTCTATCAACTCTATGAGGC+AGG - Chr3:92504789-92504808 MsG0380017141.01.T01:intron 40.0%
TTGGCTGTGATTCTCTATCA+AGG - Chr3:92507735-92507754 MsG0380017141.01.T01:CDS 40.0%
TTTCAGTGCTTTGCTACAAC+TGG - Chr3:92504718-92504737 MsG0380017141.01.T01:intron 40.0%
! AAGCTTTATCTTCACATCGG+TGG - Chr3:92503656-92503675 MsG0380017141.01.T01:three_prime_UTR 40.0%
! AATTACCCATTTTGCGTTGG+GGG + Chr3:92503687-92503706 None:intergenic 40.0%
! ATGATGCTGATGAGGGTTTT+GGG - Chr3:92503798-92503817 MsG0380017141.01.T01:CDS 40.0%
! ATGGTAAGGATTTTCTTGGG+TGG - Chr3:92504039-92504058 MsG0380017141.01.T01:intron 40.0%
! CATGCTTTTGATGAGTCCAT+TGG - Chr3:92504390-92504409 MsG0380017141.01.T01:CDS 40.0%
! CCAAAAAGCTCAGTTTTCGT+GGG - Chr3:92505050-92505069 MsG0380017141.01.T01:CDS 40.0%
! GAATGGAGATTTGGTAAGGA+TGG - Chr3:92504478-92504497 MsG0380017141.01.T01:intron 40.0%
! GACCTTGTTTAACGCTATGA+TGG - Chr3:92506785-92506804 MsG0380017141.01.T01:intron 40.0%
! GACTGAATGGAGATTTGGTA+AGG - Chr3:92504474-92504493 MsG0380017141.01.T01:intron 40.0%
! GCTTTTGTTAACTTTGGTGG+TGG - Chr3:92504298-92504317 MsG0380017141.01.T01:intron 40.0%
! GGGTTCAACTTTTCTTGGAT+TGG - Chr3:92504561-92504580 MsG0380017141.01.T01:intron 40.0%
! TCCAAAAAGCTCAGTTTTCG+TGG - Chr3:92505049-92505068 MsG0380017141.01.T01:CDS 40.0%
! TGCTCTGGATAACAGTTTCT+TGG - Chr3:92504216-92504235 MsG0380017141.01.T01:intron 40.0%
! TGGACCAATTGATAACCTTG+TGG - Chr3:92508538-92508557 MsG0380017141.01.T01:CDS 40.0%
! TGGTAAGGATTTTCTTGGGT+GGG - Chr3:92504040-92504059 MsG0380017141.01.T01:intron 40.0%
! TTAGATCATCGTAGCTTTGC+AGG + Chr3:92507672-92507691 None:intergenic 40.0%
!! ACGGATTGGACTCTTAGTAA+GGG + Chr3:92506024-92506043 None:intergenic 40.0%
!! AGGATTTTGAGGAGGAATTG+AGG - Chr3:92504156-92504175 MsG0380017141.01.T01:CDS 40.0%
!! GGTTGGTGAAAATGGTATTC+AGG - Chr3:92504237-92504256 MsG0380017141.01.T01:intron 40.0%
!! GTTGTTGTTGGTTCTTTGGA+TGG - Chr3:92504751-92504770 MsG0380017141.01.T01:intron 40.0%
!! TACGGATTGGACTCTTAGTA+AGG + Chr3:92506025-92506044 None:intergenic 40.0%
!! TGGGGTAGGATTTTAATCAC+TGG - Chr3:92507966-92507985 MsG0380017141.01.T01:CDS 40.0%
!!! CACATCCCTTTTAGTTTCTG+CGG + Chr3:92506878-92506897 None:intergenic 40.0%
AACAACCAAGTAGGTATCCG+TGG + Chr3:92504893-92504912 None:intergenic 45.0%
AAGCAAGCACATAGAAGGCA+AGG + Chr3:92506820-92506839 None:intergenic 45.0%
AAGTTGCTGATGAGTCGATG+TGG - Chr3:92504072-92504091 MsG0380017141.01.T01:intron 45.0%
AATATCCCAGAGTCTTGGAG+AGG - Chr3:92505681-92505700 MsG0380017141.01.T01:intron 45.0%
AATCTCCAGGCAGACTGAAA+AGG + Chr3:92507404-92507423 None:intergenic 45.0%
ACAGGGTCATCAGTTCTCTA+GGG - Chr3:92504687-92504706 MsG0380017141.01.T01:intron 45.0%
ACGTTCCATCAAGATAGGTC+GGG + Chr3:92507288-92507307 None:intergenic 45.0%
AGAGGGTTCCTTCTTTGGAT+TGG - Chr3:92508128-92508147 MsG0380017141.01.T01:CDS 45.0%
AGCCTAAAGGTGGTAGAAAG+GGG + Chr3:92505785-92505804 None:intergenic 45.0%
AGGTGCTCAATTGGATCCAT+CGG - Chr3:92504540-92504559 MsG0380017141.01.T01:intron 45.0%
AGTTGCTGATGAGTCGATGT+GGG - Chr3:92504073-92504092 MsG0380017141.01.T01:intron 45.0%
ATCCAACCATCTGATCTCAC+TGG - Chr3:92506923-92506942 MsG0380017141.01.T01:intron 45.0%
ATCCAGTGAGATCAGATGGT+TGG + Chr3:92506928-92506947 None:intergenic 45.0%
ATGACTCCATCGTTGAAAGC+CGG - Chr3:92506406-92506425 MsG0380017141.01.T01:intron 45.0%
ATGTCTTTAGCTAGGCCAAG+AGG + Chr3:92508333-92508352 None:intergenic 45.0%
ATTGAGGAAGCTGCAAATGG+TGG - Chr3:92504172-92504191 MsG0380017141.01.T01:CDS 45.0%
CAAGCTTCAGTGACTCATGT+TGG - Chr3:92508518-92508537 MsG0380017141.01.T01:CDS 45.0%
CACGAATTATCATCGCCTGT+TGG + Chr3:92506520-92506539 None:intergenic 45.0%
CAGCAAGATGCGAATCAAGA+GGG + Chr3:92505014-92505033 None:intergenic 45.0%
CATTCTCGCTTTGCAATGCT+TGG - Chr3:92507495-92507514 MsG0380017141.01.T01:CDS 45.0%
CCAAGAAAAGTTGAACCCGA+TGG + Chr3:92504559-92504578 None:intergenic 45.0%
CCTGGATCTCAAGCTAAAGA+GGG - Chr3:92508111-92508130 MsG0380017141.01.T01:intron 45.0%
CGACATATAGTGGCTACTGT+GGG - Chr3:92506273-92506292 MsG0380017141.01.T01:intron 45.0%
CGCAGAAACTAAAAGGGATG+TGG - Chr3:92506876-92506895 MsG0380017141.01.T01:intron 45.0%
CTAATTATCCGCTCCTATCC+CGG + Chr3:92507059-92507078 None:intergenic 45.0%
CTGGTAAGGTTGTGACTGAA+TGG - Chr3:92504461-92504480 MsG0380017141.01.T01:intron 45.0%
CTTCTCAAAGAGTCCTGGTT+CGG - Chr3:92504112-92504131 MsG0380017141.01.T01:intron 45.0%
CTTTGCAATGCTTGGAGTCT+TGG - Chr3:92507503-92507522 MsG0380017141.01.T01:CDS 45.0%
GAAACAGGAGCGACATATAG+TGG - Chr3:92506263-92506282 MsG0380017141.01.T01:intron 45.0%
GATAGCTTCTCAAAGAGTCC+TGG - Chr3:92504107-92504126 MsG0380017141.01.T01:intron 45.0%
GATTTGAGAGATGCTCCACA+AGG + Chr3:92508556-92508575 None:intergenic 45.0%
GCAACTGGGATTCATGGAAA+AGG - Chr3:92504274-92504293 MsG0380017141.01.T01:intron 45.0%
GCACCAGCTTCAAACCAAAT+TGG + Chr3:92507890-92507909 None:intergenic 45.0%
GCTAAAGAGGGTTCCTTCTT+TGG - Chr3:92508123-92508142 MsG0380017141.01.T01:CDS 45.0%
GCTGTCTGTTGCAACAGAAT+AGG - Chr3:92505648-92505667 MsG0380017141.01.T01:intron 45.0%
GGAATTGAGGAAGCTGCAAA+TGG - Chr3:92504169-92504188 MsG0380017141.01.T01:CDS 45.0%
GGCTTACGTTCCATCAAGAT+AGG + Chr3:92507293-92507312 None:intergenic 45.0%
GTAACTCAGGTGACAGAGAA+CGG - Chr3:92506240-92506259 MsG0380017141.01.T01:intron 45.0%
GTAATTCCCCCAACGCAAAA+TGG - Chr3:92503678-92503697 MsG0380017141.01.T01:exon 45.0%
GTAGCCTAAAGGTGGTAGAA+AGG + Chr3:92505787-92505806 None:intergenic 45.0%
TAACTCAGGTGACAGAGAAC+GGG - Chr3:92506241-92506260 MsG0380017141.01.T01:intron 45.0%
TAATTATCCGCTCCTATCCC+GGG + Chr3:92507058-92507077 None:intergenic 45.0%
TCAACAAATAGGTACCCTGG+GGG - Chr3:92508294-92508313 MsG0380017141.01.T01:CDS 45.0%
TCAACTACTCTTGATGGGGT+AGG - Chr3:92507952-92507971 MsG0380017141.01.T01:CDS 45.0%
TCCTGGATCTCAAGCTAAAG+AGG - Chr3:92508110-92508129 MsG0380017141.01.T01:intron 45.0%
TGAAGCCTCCAATCCAAAGA+AGG + Chr3:92508139-92508158 None:intergenic 45.0%
TGACCGTCATGGAATAGTTC+AGG - Chr3:92504615-92504634 MsG0380017141.01.T01:intron 45.0%
TGCTTTGCTACAACTGGTGA+TGG - Chr3:92504724-92504743 MsG0380017141.01.T01:intron 45.0%
TGGGAAAGTTCAGCGTGATA+TGG - Chr3:92506292-92506311 MsG0380017141.01.T01:intron 45.0%
TTGAGGAAGCTGCAAATGGT+GGG - Chr3:92504173-92504192 MsG0380017141.01.T01:CDS 45.0%
! AAATGGTGGGATTCAGAGCT+TGG - Chr3:92504186-92504205 MsG0380017141.01.T01:CDS 45.0%
! ATCGACTCATCAGCAACTTC+CGG + Chr3:92504071-92504090 None:intergenic 45.0%
! CAAAATGCAGAGAGGCGTAA+GGG + Chr3:92507314-92507333 None:intergenic 45.0%
! CATAAACCGGCTTTCAACGA+TGG + Chr3:92506415-92506434 None:intergenic 45.0%
! CCATCGGGTTCAACTTTTCT+TGG - Chr3:92504556-92504575 MsG0380017141.01.T01:intron 45.0%
! CCCACGAAAACTGAGCTTTT+TGG + Chr3:92505053-92505072 None:intergenic 45.0%
! CGTGTGGATTTTATCGCGAA+AGG - Chr3:92503894-92503913 MsG0380017141.01.T01:intron 45.0%
! GATGATGCTGATGAGGGTTT+TGG - Chr3:92503797-92503816 MsG0380017141.01.T01:CDS 45.0%
! GGGGCTTTTGTTAACTTTGG+TGG - Chr3:92504295-92504314 MsG0380017141.01.T01:intron 45.0%
! GGTGATGATGATGCTGATGA+GGG - Chr3:92503791-92503810 MsG0380017141.01.T01:CDS 45.0%
! GGTGATGGTTCTGTTGTTGT+TGG - Chr3:92504739-92504758 MsG0380017141.01.T01:intron 45.0%
! TAGAAAGAAGGGGGTGTAGT+AGG + Chr3:92505842-92505861 None:intergenic 45.0%
! TAGGGGTGTAAAGGTTGGAA+GGG + Chr3:92505819-92505838 None:intergenic 45.0%
! TCAAAATGCAGAGAGGCGTA+AGG + Chr3:92507315-92507334 None:intergenic 45.0%
! TCAGTCTGCCTGGAGATTTT+GGG - Chr3:92507406-92507425 MsG0380017141.01.T01:CDS 45.0%
! TGGACTCATCAAAAGCATGC+TGG + Chr3:92504389-92504408 None:intergenic 45.0%
! TGGAGCATCTCTCAAATCCA+TGG - Chr3:92508558-92508577 MsG0380017141.01.T01:CDS 45.0%
! TGGTGATGATGATGCTGATG+AGG - Chr3:92503790-92503809 MsG0380017141.01.T01:CDS 45.0%
! TGTAGTAGGTAGGGGTGTAA+AGG + Chr3:92505828-92505847 None:intergenic 45.0%
! TTCAGTCTGCCTGGAGATTT+TGG - Chr3:92507405-92507424 MsG0380017141.01.T01:CDS 45.0%
! TTTGGATTGGAGGCTTCACT+TGG - Chr3:92508141-92508160 MsG0380017141.01.T01:CDS 45.0%
!! AAAGTGGATTGTGGGAACCA+CGG - Chr3:92504873-92504892 MsG0380017141.01.T01:CDS 45.0%
!! AATCACTGGCTTCCAACTTC+TGG - Chr3:92507980-92507999 MsG0380017141.01.T01:CDS 45.0%
!! TTGATTTGTAGTCCCGGGAT+AGG - Chr3:92507043-92507062 MsG0380017141.01.T01:intron 45.0%
!!! GTTTTCGGGCTACTGACTTA+TGG - Chr3:92505238-92505257 MsG0380017141.01.T01:intron 45.0%
AAAACCGCCTTTCCTGGACT+TGG - Chr3:92504814-92504833 MsG0380017141.01.T01:CDS 50.0%
ACCCCCTTTCTACCACCTTT+AGG - Chr3:92505780-92505799 MsG0380017141.01.T01:intron 50.0%
ACCTGTGTTGAATTGGGCAC+AGG - Chr3:92504669-92504688 MsG0380017141.01.T01:intron 50.0%
AGCAGCTCTTTAGACCCTGT+TGG + Chr3:92506362-92506381 None:intergenic 50.0%
AGGCCAAGAGGATTTAGCAG+AGG + Chr3:92508321-92508340 None:intergenic 50.0%
AGGGTCATCAGTTCTCTAGG+GGG - Chr3:92504689-92504708 MsG0380017141.01.T01:intron 50.0%
AGGTGAACCAAGTCCAGGAA+AGG + Chr3:92504824-92504843 None:intergenic 50.0%
CACAGGGTCATCAGTTCTCT+AGG - Chr3:92504686-92504705 MsG0380017141.01.T01:intron 50.0%
CAGGGTCATCAGTTCTCTAG+GGG - Chr3:92504688-92504707 MsG0380017141.01.T01:intron 50.0%
CCAGCAAGATGCGAATCAAG+AGG + Chr3:92505015-92505034 None:intergenic 50.0%
CCTGTGTTGAATTGGGCACA+GGG - Chr3:92504670-92504689 MsG0380017141.01.T01:intron 50.0%
CGTTCCATCAAGATAGGTCG+GGG + Chr3:92507287-92507306 None:intergenic 50.0%
GACTTCGAGTAGCCTAAAGG+TGG + Chr3:92505795-92505814 None:intergenic 50.0%
GATTGTTACCGCAGCCAACA+GGG - Chr3:92506345-92506364 MsG0380017141.01.T01:intron 50.0%
GCCTAAAGGTGGTAGAAAGG+GGG + Chr3:92505784-92505803 None:intergenic 50.0%
GCGACATATAGTGGCTACTG+TGG - Chr3:92506272-92506291 MsG0380017141.01.T01:intron 50.0%
GCTATAACCAATGGAGCCTC+AGG + Chr3:92506465-92506484 None:intergenic 50.0%
GCTCATTCAGCATGTCCAAC+AGG - Chr3:92506502-92506521 MsG0380017141.01.T01:intron 50.0%
GGTCCTCTGCTAAATCCTCT+TGG - Chr3:92508315-92508334 MsG0380017141.01.T01:CDS 50.0%
GGTGACTTCGAGTAGCCTAA+AGG + Chr3:92505798-92505817 None:intergenic 50.0%
GGTGCTCAATTGGATCCATC+GGG - Chr3:92504541-92504560 MsG0380017141.01.T01:intron 50.0%
GTAACAGGTGAACCAAGTCC+AGG + Chr3:92504829-92504848 None:intergenic 50.0%
GTGGTATGTGCAAGCAGAGT+TGG - Chr3:92507470-92507489 MsG0380017141.01.T01:CDS 50.0%
GTTCCATCAAGATAGGTCGG+GGG + Chr3:92507286-92507305 None:intergenic 50.0%
TGAACCAAGTCCAGGAAAGG+CGG + Chr3:92504821-92504840 None:intergenic 50.0%
TGATTCTCCTGAGGCTCCAT+TGG - Chr3:92506455-92506474 MsG0380017141.01.T01:intron 50.0%
TGATTGTTACCGCAGCCAAC+AGG - Chr3:92506344-92506363 MsG0380017141.01.T01:intron 50.0%
TGTTACAGGGCGACTTGCAA+TGG - Chr3:92508472-92508491 MsG0380017141.01.T01:intron 50.0%
TTCGTCGTCAACGTCGAAGT+TGG - Chr3:92504321-92504340 MsG0380017141.01.T01:intron 50.0%
! AAATCCTGACTCGCTCTCAC+TGG + Chr3:92504143-92504162 None:intergenic 50.0%
! AACTTTCGAGTAACCCGTCG+CGG + Chr3:92503463-92503482 None:intergenic 50.0%
! AAGAAGGGGGTGTAGTAGGT+AGG + Chr3:92505838-92505857 None:intergenic 50.0%
! AGAAGGGGGTGTAGTAGGTA+GGG + Chr3:92505837-92505856 None:intergenic 50.0%
! CCTCTTGATTCGCATCTTGC+TGG - Chr3:92505012-92505031 MsG0380017141.01.T01:CDS 50.0%
! GAGAGCGAGTCAGGATTTTG+AGG - Chr3:92504145-92504164 MsG0380017141.01.T01:CDS 50.0%
! GGGTTCCTTCTTTGGATTGG+AGG - Chr3:92508131-92508150 MsG0380017141.01.T01:CDS 50.0%
! GGTAACCTTTTCAGTCTGCC+TGG - Chr3:92507396-92507415 MsG0380017141.01.T01:CDS 50.0%
! GTAGGGGTGTAAAGGTTGGA+AGG + Chr3:92505820-92505839 None:intergenic 50.0%
! GTAGGTAGGGGTGTAAAGGT+TGG + Chr3:92505824-92505843 None:intergenic 50.0%
! TCTTTAGACCCTGTTGGCTG+CGG + Chr3:92506356-92506375 None:intergenic 50.0%
! TTTTCTTGGGTGGGCGAAAC+CGG - Chr3:92504049-92504068 MsG0380017141.01.T01:intron 50.0%
!! AAAGGGGGTGTTGGAAGCAA+GGG + Chr3:92505769-92505788 None:intergenic 50.0%
!! AGCGAGTCAGGATTTTGAGG+AGG - Chr3:92504148-92504167 MsG0380017141.01.T01:CDS 50.0%
!! CCCTCTTTAGCTTGAGATCC+AGG + Chr3:92508114-92508133 None:intergenic 50.0%
!! GAGGTTGGATTGGCCATGTT+TGG - Chr3:92507716-92507735 MsG0380017141.01.T01:CDS 50.0%
!! GGATGTGGAGGCTTTAGAAG+CGG - Chr3:92506891-92506910 MsG0380017141.01.T01:intron 50.0%
!! TGCAGTCACTGATTCTCCTG+AGG - Chr3:92506446-92506465 MsG0380017141.01.T01:intron 50.0%
CACTTGGAGGCTTAGAGCCA+GGG - Chr3:92508157-92508176 MsG0380017141.01.T01:CDS 55.0%
CAGTGGTGTCCTGCTGTTGA+AGG + Chr3:92507166-92507185 None:intergenic 55.0%
CCATGCCTCTCCAAGACTCT+GGG + Chr3:92505689-92505708 None:intergenic 55.0%
CCCTGTGCCCAATTCAACAC+AGG + Chr3:92504673-92504692 None:intergenic 55.0%
CTTCAACAGCAGGACACCAC+TGG - Chr3:92507164-92507183 MsG0380017141.01.T01:intron 55.0%
CTTCGCGTCGCAGGAGTTAA+TGG - Chr3:92507860-92507879 MsG0380017141.01.T01:CDS 55.0%
GATCCCCCGACCTATCTTGA+TGG - Chr3:92507280-92507299 MsG0380017141.01.T01:CDS 55.0%
GATTTAGCAGAGGACCCCCA+GGG + Chr3:92508311-92508330 None:intergenic 55.0%
GGATTGGAGGCTTCACTTGG+AGG - Chr3:92508144-92508163 MsG0380017141.01.T01:CDS 55.0%
GGGAACCACGGATACCTACT+TGG - Chr3:92504885-92504904 MsG0380017141.01.T01:intron 55.0%
GGGTCGAACCCAAAATCTCC+AGG + Chr3:92507417-92507436 None:intergenic 55.0%
GGGTTGAGCTTGAGCAACCT+TGG + Chr3:92504994-92505013 None:intergenic 55.0%
GGTGACAGAGAACGGGAAAC+AGG - Chr3:92506248-92506267 MsG0380017141.01.T01:intron 55.0%
GTCGTCAACGTCGAAGTTGG+TGG - Chr3:92504324-92504343 MsG0380017141.01.T01:intron 55.0%
TCACTTGGAGGCTTAGAGCC+AGG - Chr3:92508156-92508175 MsG0380017141.01.T01:CDS 55.0%
TCCATGCCTCTCCAAGACTC+TGG + Chr3:92505690-92505709 None:intergenic 55.0%
TGGGATATGCGTGACCGTCA+TGG - Chr3:92504604-92504623 MsG0380017141.01.T01:intron 55.0%
TTGTAGTCCCGGGATAGGAG+CGG - Chr3:92507048-92507067 MsG0380017141.01.T01:intron 55.0%
! AGGTGGTAGAAAGGGGGTGT+TGG + Chr3:92505778-92505797 None:intergenic 55.0%
! GAAGGGGGTGTAGTAGGTAG+GGG + Chr3:92505836-92505855 None:intergenic 55.0%
!! GAAAGGGGGTGTTGGAAGCA+AGG + Chr3:92505770-92505789 None:intergenic 55.0%
ATCAAGTCCCGGGAGCCATG+TGG + Chr3:92507263-92507282 None:intergenic 60.0%
ATGCAGCTACTTCGCGTCGC+AGG - Chr3:92507851-92507870 MsG0380017141.01.T01:CDS 60.0%
CAGCACAACAGCGACCCACA+TGG - Chr3:92507245-92507264 MsG0380017141.01.T01:CDS 60.0%
CAGGCGAAAACCGCCTTTCC+TGG - Chr3:92504808-92504827 MsG0380017141.01.T01:intron 60.0%
CCACACGACGCTGATCAGCT+AGG + Chr3:92503881-92503900 None:intergenic 60.0%
CCCAGAGTCTTGGAGAGGCA+TGG - Chr3:92505686-92505705 MsG0380017141.01.T01:intron 60.0%
CCTAGCTGATCAGCGTCGTG+TGG - Chr3:92503878-92503897 MsG0380017141.01.T01:intron 60.0%
GGATTTAGCAGAGGACCCCC+AGG + Chr3:92508312-92508331 None:intergenic 60.0%
GGGATTCAGAGCTTGGCGCT+TGG - Chr3:92504193-92504212 MsG0380017141.01.T01:CDS 60.0%
TAGGTCGGGGGATCAAGTCC+CGG + Chr3:92507274-92507293 None:intergenic 60.0%
TCAAGTCCCGGGAGCCATGT+GGG + Chr3:92507262-92507281 None:intergenic 60.0%
!! GGGGTGTTGGAAGCAAGGGA+AGG + Chr3:92505765-92505784 None:intergenic 60.0%
ACAGCGACCCACATGGCTCC+CGG - Chr3:92507252-92507271 MsG0380017141.01.T01:CDS 65.0%
ACTCCCGTTCCTGCAGCAGC+AGG + Chr3:92507196-92507215 None:intergenic 65.0%
AGGCCTGCTGCTGCAGGAAC+GGG - Chr3:92507190-92507209 MsG0380017141.01.T01:intron 65.0%
AGGTCGGGGGATCAAGTCCC+GGG + Chr3:92507273-92507292 None:intergenic 65.0%
CACGCCAGTGAGAGCGAGTC+AGG - Chr3:92504136-92504155 MsG0380017141.01.T01:CDS 65.0%
CAGGCCTGCTGCTGCAGGAA+CGG - Chr3:92507189-92507208 MsG0380017141.01.T01:intron 65.0%
! CTGACTCGCTCTCACTGGCG+TGG + Chr3:92504138-92504157 None:intergenic 65.0%
!! CAGCAGGACACCACTGGCTC+AGG - Chr3:92507170-92507189 MsG0380017141.01.T01:intron 65.0%
!! GAGCTTGGCGCTTGGTGCTC+TGG - Chr3:92504201-92504220 MsG0380017141.01.T01:CDS 65.0%
CAGCAGCAGGCCTGAGCCAG+TGG + Chr3:92507183-92507202 None:intergenic 70.0%
CAGCGACCCACATGGCTCCC+GGG - Chr3:92507253-92507272 MsG0380017141.01.T01:CDS 70.0%
CTCACTGGCGTGGCCGAACC+AGG + Chr3:92504128-92504147 None:intergenic 70.0%
TGGCTCAGGCCTGCTGCTGC+AGG - Chr3:92507184-92507203 MsG0380017141.01.T01:intron 70.0%
GGTGGCGCTCACAGCCGCGA+CGG - Chr3:92503446-92503465 MsG0380017141.01.T01:three_prime_UTR 75.0%
GTGGCGCTCACAGCCGCGAC+GGG - Chr3:92503447-92503466 MsG0380017141.01.T01:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 92503443 92508859 92503443 ID=MsG0380017141.01;Name=MsG0380017141.01
Chr3 mRNA 92503443 92508859 92503443 ID=MsG0380017141.01.T01;Parent=MsG0380017141.01;Name=MsG0380017141.01.T01;_AED=0.26;_eAED=0.26;_QI=0|0.55|0.4|1|1|1|10|237|797
Chr3 exon 92503443 92503822 92503443 ID=MsG0380017141.01.T01:exon:12612;Parent=MsG0380017141.01.T01
Chr3 exon 92503909 92503997 92503909 ID=MsG0380017141.01.T01:exon:12611;Parent=MsG0380017141.01.T01
Chr3 exon 92504124 92504228 92504124 ID=MsG0380017141.01.T01:exon:12610;Parent=MsG0380017141.01.T01
Chr3 exon 92504333 92504445 92504333 ID=MsG0380017141.01.T01:exon:12609;Parent=MsG0380017141.01.T01
Chr3 exon 92504811 92504892 92504811 ID=MsG0380017141.01.T01:exon:12608;Parent=MsG0380017141.01.T01
Chr3 exon 92504997 92505223 92504997 ID=MsG0380017141.01.T01:exon:12607;Parent=MsG0380017141.01.T01
Chr3 exon 92505826 92506053 92505826 ID=MsG0380017141.01.T01:exon:12606;Parent=MsG0380017141.01.T01
Chr3 exon 92507231 92508043 92507231 ID=MsG0380017141.01.T01:exon:12605;Parent=MsG0380017141.01.T01
Chr3 exon 92508112 92508335 92508112 ID=MsG0380017141.01.T01:exon:12604;Parent=MsG0380017141.01.T01
Chr3 exon 92508490 92508859 92508490 ID=MsG0380017141.01.T01:exon:12603;Parent=MsG0380017141.01.T01
Chr3 CDS 92508490 92508859 92508490 ID=MsG0380017141.01.T01:cds;Parent=MsG0380017141.01.T01
Chr3 CDS 92508112 92508335 92508112 ID=MsG0380017141.01.T01:cds;Parent=MsG0380017141.01.T01
Chr3 CDS 92507231 92508043 92507231 ID=MsG0380017141.01.T01:cds;Parent=MsG0380017141.01.T01
Chr3 CDS 92505826 92506053 92505826 ID=MsG0380017141.01.T01:cds;Parent=MsG0380017141.01.T01
Chr3 CDS 92504997 92505223 92504997 ID=MsG0380017141.01.T01:cds;Parent=MsG0380017141.01.T01
Chr3 CDS 92504811 92504892 92504811 ID=MsG0380017141.01.T01:cds;Parent=MsG0380017141.01.T01
Chr3 CDS 92504333 92504445 92504333 ID=MsG0380017141.01.T01:cds;Parent=MsG0380017141.01.T01
Chr3 CDS 92504124 92504228 92504124 ID=MsG0380017141.01.T01:cds;Parent=MsG0380017141.01.T01
Chr3 CDS 92503909 92503997 92503909 ID=MsG0380017141.01.T01:cds;Parent=MsG0380017141.01.T01
Chr3 CDS 92503680 92503822 92503680 ID=MsG0380017141.01.T01:cds;Parent=MsG0380017141.01.T01
Chr3 three_prime_UTR 92503443 92503679 92503443 ID=MsG0380017141.01.T01:three_prime_utr;Parent=MsG0380017141.01.T01
Gene Sequence

>MsG0380017141.01.T01

ATGGGTGGCGCTCACAGCCGCGACGGGTTACTCGAAAGTTCCGATGAAGAATACGAAGAAAATGAAAACGAAGAAGCGAACTACGAAGATGCAAACGAAGGAGAAGATTCAGAGAAAAGAGTGAAAACTCCGTCATCTGTAGATGAAGTTGAAGCCAAACTCAAAGCTCTTAAGCTTAAATACGCTGTTAAAAATCAAAACCCTAACGCCGTTAAGCTTTATCTTCACATCGGTGGTAATTCCCCCAACGCAAAATGGGTAATTTCTGAGAAATTTACTACTTACTCTTTTGTTAAAACTCGTTGTGTTGGTGGAAACAGCGATGATGACGAAGATGAAGAAGAAGATGGTGATGATGATGCTGATGAGGTGAAGTTTCAGAATTGTACTTTTGAGAATACGCATGGGTATGAAGCTACTGATGAGAACAAGCTTAAAGTTTATGGTAAGGATTTTCTTGGGTGGGCGAAACCGGAAGTTGCTGATGAGTCGATGTGGGAAGATGCTGATGATAGCTTCTCAAAGAGTCCTGGTTCGGCCACGCCAGTGAGAGCGAGTCAGGATTTTGAGGAGGAATTGAGGAAGCTGCAAATGGTTGTGAAGAATTTTGCAACTGGGATTCATGGAAAAGGGGCTTTTGTTAACTTTGGTGGTGGTTCGTCGTCAACGTCGAAGTTGGTGGATTGCACTCCTAAGAAAACGCTTCTCATGAAAGCTGAGACCAGCATGCTTTTGATGAGTCCATTGGGTGAAAATAAACTTCATTCAACAGGGCTTCACCAGTTTGATATTGAGACTGGTAAGGTTGTGACTGAATGGAGATTTGGTAAGGATGGTACTGAGATTACAATGAAAGATATCACCAATGATAGTAAAGGTGCTCAATTGGATCCATCGGGTTCAACTTTTCTTGGATTGGATGATAATAGGCTTTGTAGGTGGGATATGCGTGACCGTCATGGAATAGTTCAGGATCTTGCTGACTCTAACTCCAATATGAGTACACCTGTGTTGAATTGGGCACAGGGTCATCAGTTCTCTAGGGGGACAAACTTTCAGTGCTTTGCTACAACTGGTGATGGTTCTGTTGTTGTTGGTTCTTTGGATGGAAAGATTCGGCTGTATTCTATCAACTCTATGAGGCAGGCGAAAACCGCCTTTCCTGGACTTGGTTCACCTGTTACTAATGTGGATGTAACTTTTGATGGAAAGTGGATTGTGGGAACCACGGATACCTACTTGGTTGTTATCTGTACCGTGTTTACCGATAAAGATGGGAAAACTAAAAATGGTTTTGCTGGTAGAATGGGAAATAATATTGCTGCTCCAAGGTTGCTCAAGCTCAACCCTCTTGATTCGCATCTTGCTGGAGTCAATAACAAATTCCAAAAAGCTCAGTTTTCGTGGGTGACAGAGAACGGGAAACAGGAGCGACATATAGTGGCTACTGTGGGAAAGTTCAGCGTGATATGGAACTTTCAACAGGTCAAAGATGGATCTCATGATTGTTACCGCAGCCAACAGGGTCTAAAGAGCTGCTACTGCTACAAGATAGTTCTCAGGGATGACTCCATCGTTGAAAGCCGGTTTATGCACGACAAGTTTGCAGTCACTGATTCTCCTGAGGCTCCATTGAGAACAATGGTTGCACTTGCAGCAATAGCAAGAAGCTTCCATTTCCAGCAACATTCTTTAATCAACAGCAATGTCATTGGTAAACCTTCAACAGCAGGACACCACTGGCTCAGGCCTGCTGCTGCAGGAACGGGAGTCACTCCACGTTATAAACAAATTTGTGCTGCAGCACAACAGCGACCCACATGGCTCCCGGGACTTGATCCCCCGACCTATCTTGATGGAACTCTGCCTGGAGATTTTGGGTTCGACCCACTTGGACTTGGAGAGGATCCTGAAAGCTTAAAGTGGTATGTGCAAGCAGAGTTGCTACTTCGCGTCGCAGGAGTTAATGGCATACCAATTTGGTTTGAAGCTGGTGCAGTAAAATACGAGTTTGCAAACACAGGGACACTCGTCGTTGTTCAACTACTCTTGATGGGGTATGCTGAAACAAAAAGGTACATGGATTTTGTTAGTCCTGGATCTCAAGCTAAAGAGGGTTCCTTCTTTGGATTGGAGGCTTCACTTGGAGGCTTAGAGCCAGGGTACCCTGGGGGTCCTCTGCTAAATCCTCTTGGCCTAGCTAAAGACATTAAAAGTGCTCGTGAATGGAAGCTTAAAGAGATCAAGAATGGGCGACTTGCAATGGTAGCAATACTTGGTATCTTTGTACAAGCTTCAGTGACTCATGTTGGACCAATTGATAACCTTGTGGAGCATCTCTCAAATCCATGGCATAAAACTATTATTCAGACCCTTGCAAGTTCTAGTTCTTAG

Protein sequence

>MsG0380017141.01.T01

MGGAHSRDGLLESSDEEYEENENEEANYEDANEGEDSEKRVKTPSSVDEVEAKLKALKLKYAVKNQNPNAVKLYLHIGGNSPNAKWVISEKFTTYSFVKTRCVGGNSDDDEDEEEDGDDDADEVKFQNCTFENTHGYEATDENKLKVYGKDFLGWAKPEVADESMWEDADDSFSKSPGSATPVRASQDFEEELRKLQMVVKNFATGIHGKGAFVNFGGGSSSTSKLVDCTPKKTLLMKAETSMLLMSPLGENKLHSTGLHQFDIETGKVVTEWRFGKDGTEITMKDITNDSKGAQLDPSGSTFLGLDDNRLCRWDMRDRHGIVQDLADSNSNMSTPVLNWAQGHQFSRGTNFQCFATTGDGSVVVGSLDGKIRLYSINSMRQAKTAFPGLGSPVTNVDVTFDGKWIVGTTDTYLVVICTVFTDKDGKTKNGFAGRMGNNIAAPRLLKLNPLDSHLAGVNNKFQKAQFSWVTENGKQERHIVATVGKFSVIWNFQQVKDGSHDCYRSQQGLKSCYCYKIVLRDDSIVESRFMHDKFAVTDSPEAPLRTMVALAAIARSFHFQQHSLINSNVIGKPSTAGHHWLRPAAAGTGVTPRYKQICAAAQQRPTWLPGLDPPTYLDGTLPGDFGFDPLGLGEDPESLKWYVQAELLLRVAGVNGIPIWFEAGAVKYEFANTGTLVVVQLLLMGYAETKRYMDFVSPGSQAKEGSFFGLEASLGGLEPGYPGGPLLNPLGLAKDIKSAREWKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLASSSS*