Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780039258.01.T01 | XP_013449172.1 | 96.657 | 329 | 10 | 1 | 1 | 328 | 1 | 329 | 0 | 653 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780039258.01.T01 | Q8VYP0 | 59.697 | 330 | 121 | 3 | 11 | 328 | 5 | 334 | 6.71E-130 | 377 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780039258.01.T01 | A0A072U091 | 96.657 | 329 | 10 | 1 | 1 | 328 | 1 | 329 | 0.0 | 653 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048817.01 | MsG0780039258.01 | 0.813743 | 2.192882e-51 | 1.443908e-48 |
MsG0180000444.01 | MsG0780039258.01 | 0.849610 | 2.895815e-60 | 5.520563e-57 |
MsG0180000790.01 | MsG0780039258.01 | 0.862822 | 3.858477e-64 | 1.145468e-60 |
MsG0180001131.01 | MsG0780039258.01 | 0.819786 | 9.673531e-53 | 7.517054e-50 |
MsG0180001141.01 | MsG0780039258.01 | 0.837672 | 4.526358e-57 | 5.922866e-54 |
MsG0180001213.01 | MsG0780039258.01 | 0.830335 | 3.112827e-55 | 3.269886e-52 |
MsG0180002458.01 | MsG0780039258.01 | 0.847740 | 9.554085e-60 | 1.714614e-56 |
MsG0180003073.01 | MsG0780039258.01 | 0.824095 | 9.716785e-54 | 8.522784e-51 |
MsG0180003097.01 | MsG0780039258.01 | 0.825742 | 3.971003e-54 | 3.651119e-51 |
MsG0180003697.01 | MsG0780039258.01 | 0.848889 | 4.596797e-60 | 8.560481e-57 |
MsG0180003793.01 | MsG0780039258.01 | 0.817194 | 3.742411e-52 | 2.707151e-49 |
MsG0180003854.01 | MsG0780039258.01 | 0.839350 | 1.669799e-57 | 2.299891e-54 |
MsG0180004129.01 | MsG0780039258.01 | 0.808472 | 3.045066e-50 | 1.742719e-47 |
MsG0180004130.01 | MsG0780039258.01 | 0.859635 | 3.607626e-63 | 9.592391e-60 |
MsG0180004548.01 | MsG0780039258.01 | 0.853915 | 1.743000e-61 | 3.826039e-58 |
MsG0180004656.01 | MsG0780039258.01 | 0.833080 | 6.548653e-56 | 7.461922e-53 |
MsG0180004780.01 | MsG0780039258.01 | 0.807149 | 5.819769e-50 | 3.217190e-47 |
MsG0180004997.01 | MsG0780039258.01 | 0.834145 | 3.549310e-56 | 4.174651e-53 |
MsG0180005303.01 | MsG0780039258.01 | -0.816483 | 5.403677e-52 | 3.833494e-49 |
MsG0180005382.01 | MsG0780039258.01 | 0.835941 | 1.251308e-56 | 1.553359e-53 |
MsG0180005424.01 | MsG0780039258.01 | 0.820746 | 5.827137e-53 | 4.650204e-50 |
MsG0180005851.01 | MsG0780039258.01 | 0.801120 | 1.045889e-48 | 4.955044e-46 |
MsG0180005957.01 | MsG0780039258.01 | 0.862854 | 3.773138e-64 | 1.121206e-60 |
MsG0280006406.01 | MsG0780039258.01 | 0.834670 | 2.620591e-56 | 3.131328e-53 |
MsG0280010776.01 | MsG0780039258.01 | 0.840956 | 6.359743e-58 | 9.205596e-55 |
MsG0280011371.01 | MsG0780039258.01 | 0.833090 | 6.509585e-56 | 7.419644e-53 |
MsG0280011387.01 | MsG0780039258.01 | 0.862937 | 3.556273e-64 | 1.059788e-60 |
MsG0380011614.01 | MsG0780039258.01 | 0.815307 | 9.885521e-52 | 6.791103e-49 |
MsG0380011704.01 | MsG0780039258.01 | 0.855457 | 6.228362e-62 | 1.438940e-58 |
MsG0380012108.01 | MsG0780039258.01 | 0.818636 | 1.767755e-52 | 1.330427e-49 |
MsG0380012310.01 | MsG0780039258.01 | 0.815948 | 7.115497e-52 | 4.974728e-49 |
MsG0380012566.01 | MsG0780039258.01 | 0.843989 | 9.977336e-59 | 1.588315e-55 |
MsG0380012570.01 | MsG0780039258.01 | 0.807089 | 5.993362e-50 | 3.307945e-47 |
MsG0380013178.01 | MsG0780039258.01 | 0.803552 | 3.300932e-49 | 1.663743e-46 |
MsG0380014548.01 | MsG0780039258.01 | 0.800069 | 1.713624e-48 | 7.904673e-46 |
MsG0380014577.01 | MsG0780039258.01 | 0.806340 | 8.627552e-50 | 4.671021e-47 |
MsG0680031700.01 | MsG0780039258.01 | 0.836084 | 1.151002e-56 | 1.435232e-53 |
MsG0680031822.01 | MsG0780039258.01 | 0.804125 | 2.509560e-49 | 1.283584e-46 |
MsG0680032430.01 | MsG0780039258.01 | 0.815360 | 9.621393e-52 | 6.619307e-49 |
MsG0680034433.01 | MsG0780039258.01 | 0.804083 | 2.560911e-49 | 1.308448e-46 |
MsG0480018906.01 | MsG0780039258.01 | 0.812154 | 4.890459e-51 | 3.085777e-48 |
MsG0480019126.01 | MsG0780039258.01 | 0.802664 | 5.040238e-49 | 2.483122e-46 |
MsG0480019373.01 | MsG0780039258.01 | 0.807650 | 4.557088e-50 | 2.552177e-47 |
MsG0480019380.01 | MsG0780039258.01 | 0.802584 | 5.233575e-49 | 2.573221e-46 |
MsG0480021006.01 | MsG0780039258.01 | 0.801708 | 7.925899e-49 | 3.810941e-46 |
MsG0480021037.01 | MsG0780039258.01 | 0.811702 | 6.133082e-51 | 3.822889e-48 |
MsG0480021164.01 | MsG0780039258.01 | 0.818717 | 1.694233e-52 | 1.277983e-49 |
MsG0480021706.01 | MsG0780039258.01 | 0.804258 | 2.354735e-49 | 1.208471e-46 |
MsG0480021904.01 | MsG0780039258.01 | 0.826916 | 2.085606e-54 | 1.983143e-51 |
MsG0480021994.01 | MsG0780039258.01 | 0.836667 | 8.182766e-57 | 1.038234e-53 |
MsG0480022035.01 | MsG0780039258.01 | 0.822394 | 2.424896e-53 | 2.027307e-50 |
MsG0480022222.01 | MsG0780039258.01 | 0.825516 | 4.492308e-54 | 4.103684e-51 |
MsG0480022493.01 | MsG0780039258.01 | 0.804293 | 2.315251e-49 | 1.189337e-46 |
MsG0480023174.01 | MsG0780039258.01 | 0.856674 | 2.742758e-62 | 6.596509e-59 |
MsG0480023378.01 | MsG0780039258.01 | 0.825384 | 4.826795e-54 | 4.392690e-51 |
MsG0480023652.01 | MsG0780039258.01 | 0.834696 | 2.581712e-56 | 3.086998e-53 |
MsG0480023747.01 | MsG0780039258.01 | 0.827269 | 1.717187e-54 | 1.649736e-51 |
MsG0480023814.01 | MsG0780039258.01 | 0.803090 | 4.114233e-49 | 2.049001e-46 |
MsG0480023968.01 | MsG0780039258.01 | 0.808028 | 3.786331e-50 | 2.141674e-47 |
MsG0580024390.01 | MsG0780039258.01 | 0.842436 | 2.588758e-58 | 3.925406e-55 |
MsG0580024495.01 | MsG0780039258.01 | 0.822526 | 2.259258e-53 | 1.895876e-50 |
MsG0580024946.01 | MsG0780039258.01 | 0.800863 | 1.180298e-48 | 5.555543e-46 |
MsG0580025400.01 | MsG0780039258.01 | 0.895757 | 7.075661e-76 | 7.435586e-72 |
MsG0580025421.01 | MsG0780039258.01 | 0.833558 | 4.976353e-56 | 5.751667e-53 |
MsG0580025621.01 | MsG0780039258.01 | 0.807697 | 4.453838e-50 | 2.497391e-47 |
MsG0580025756.01 | MsG0780039258.01 | 0.800779 | 1.227697e-48 | 5.766028e-46 |
MsG0380015027.01 | MsG0780039258.01 | 0.839383 | 1.637635e-57 | 2.257885e-54 |
MsG0380015216.01 | MsG0780039258.01 | 0.839716 | 1.341727e-57 | 1.868683e-54 |
MsG0380015818.01 | MsG0780039258.01 | 0.825712 | 4.037108e-54 | 3.708623e-51 |
MsG0380015964.01 | MsG0780039258.01 | 0.859742 | 3.349931e-63 | 8.940454e-60 |
MsG0380015965.01 | MsG0780039258.01 | 0.856381 | 3.344309e-62 | 7.967399e-59 |
MsG0380016992.01 | MsG0780039258.01 | 0.800891 | 1.165018e-48 | 5.487658e-46 |
MsG0380017023.01 | MsG0780039258.01 | 0.807629 | 4.604152e-50 | 2.577185e-47 |
MsG0380017866.01 | MsG0780039258.01 | 0.845857 | 3.126760e-59 | 5.282225e-56 |
MsG0580026301.01 | MsG0780039258.01 | 0.821751 | 3.417616e-53 | 2.804945e-50 |
MsG0580027034.01 | MsG0780039258.01 | 0.805979 | 1.027805e-49 | 5.513854e-47 |
MsG0580027039.01 | MsG0780039258.01 | 0.819137 | 1.360191e-52 | 1.037932e-49 |
MsG0580027361.01 | MsG0780039258.01 | 0.800440 | 1.439810e-48 | 6.704513e-46 |
MsG0580028044.01 | MsG0780039258.01 | 0.803384 | 3.576217e-49 | 1.794611e-46 |
MsG0580028606.01 | MsG0780039258.01 | 0.802515 | 5.408597e-49 | 2.654512e-46 |
MsG0580028901.01 | MsG0780039258.01 | 0.808536 | 2.951727e-50 | 1.692039e-47 |
MsG0580029014.01 | MsG0780039258.01 | 0.822307 | 2.540221e-53 | 2.118299e-50 |
MsG0580029283.01 | MsG0780039258.01 | 0.820727 | 5.886102e-53 | 4.694724e-50 |
MsG0580029355.01 | MsG0780039258.01 | 0.817644 | 2.963799e-52 | 2.170534e-49 |
MsG0580029717.01 | MsG0780039258.01 | 0.816825 | 4.529613e-52 | 3.243725e-49 |
MsG0580030080.01 | MsG0780039258.01 | 0.800644 | 1.308558e-48 | 6.124909e-46 |
MsG0680030285.01 | MsG0780039258.01 | 0.800448 | 1.434292e-48 | 6.680115e-46 |
MsG0680030414.01 | MsG0780039258.01 | 0.837775 | 4.258635e-57 | 5.590331e-54 |
MsG0680030636.01 | MsG0780039258.01 | 0.805794 | 1.124159e-49 | 6.002162e-47 |
MsG0280007222.01 | MsG0780039258.01 | 0.822110 | 2.822245e-53 | 2.340135e-50 |
MsG0280007714.01 | MsG0780039258.01 | 0.823857 | 1.105382e-53 | 9.631591e-51 |
MsG0280007763.01 | MsG0780039258.01 | 0.805177 | 1.514116e-49 | 7.956915e-47 |
MsG0280007847.01 | MsG0780039258.01 | 0.804629 | 1.970714e-49 | 1.021092e-46 |
MsG0280008613.01 | MsG0780039258.01 | 0.812869 | 3.411771e-51 | 2.193905e-48 |
MsG0280009230.01 | MsG0780039258.01 | 0.873145 | 1.844151e-67 | 7.919251e-64 |
MsG0280009716.01 | MsG0780039258.01 | 0.824078 | 9.804875e-54 | 8.596235e-51 |
MsG0280010013.01 | MsG0780039258.01 | 0.815210 | 1.038718e-51 | 7.116413e-49 |
MsG0680035704.01 | MsG0780039258.01 | 0.822181 | 2.717594e-53 | 2.257862e-50 |
MsG0680035854.01 | MsG0780039258.01 | 0.830852 | 2.324884e-55 | 2.479489e-52 |
MsG0780036240.01 | MsG0780039258.01 | 0.803804 | 2.927465e-49 | 1.485002e-46 |
MsG0780036705.01 | MsG0780039258.01 | 0.885543 | 7.430068e-72 | 5.120859e-68 |
MsG0780036813.01 | MsG0780039258.01 | 0.831895 | 1.287970e-55 | 1.416914e-52 |
MsG0780036964.01 | MsG0780039258.01 | 0.815165 | 1.062950e-51 | 7.273420e-49 |
MsG0780038400.01 | MsG0780039258.01 | 0.819310 | 1.242257e-52 | 9.524666e-50 |
MsG0780039258.01 | MsG0780039943.01 | 0.806634 | 7.480092e-50 | 4.080088e-47 |
MsG0780039258.01 | MsG0780040734.01 | 0.807138 | 5.852438e-50 | 3.234255e-47 |
MsG0780039258.01 | MsG0780041137.01 | 0.865001 | 8.103067e-65 | 2.595866e-61 |
MsG0780039258.01 | MsG0780041223.01 | 0.810707 | 1.008049e-50 | 6.120493e-48 |
MsG0780039258.01 | MsG0780041294.01 | 0.836510 | 8.969696e-57 | 1.132774e-53 |
MsG0780039258.01 | MsG0780041345.01 | 0.817985 | 2.482268e-52 | 1.834968e-49 |
MsG0780039258.01 | MsG0780041729.01 | -0.810403 | 1.173094e-50 | 7.064308e-48 |
MsG0780039258.01 | MsG0880042581.01 | 0.851108 | 1.100170e-60 | 2.202957e-57 |
MsG0780039258.01 | MsG0880045124.01 | 0.807462 | 4.994717e-50 | 2.783825e-47 |
MsG0780039258.01 | MsG0880046285.01 | 0.816740 | 4.732369e-52 | 3.381039e-49 |
MsG0780039258.01 | MsG0880046321.01 | 0.860449 | 2.049039e-63 | 5.603352e-60 |
MsG0780039258.01 | MsG0880046328.01 | 0.814573 | 1.438464e-51 | 9.687235e-49 |
MsG0780039258.01 | MsG0880046575.01 | 0.866705 | 2.344784e-65 | 7.978821e-62 |
MsG0780039258.01 | MsG0880047038.01 | 0.821274 | 4.404712e-53 | 3.566976e-50 |
MsG0780039258.01 | MsG0880047427.01 | 0.823483 | 1.352179e-53 | 1.165741e-50 |
MsG0780039258.01 | MsG0880047428.01 | 0.811443 | 6.984169e-51 | 4.323946e-48 |
MsG0780039258.01 | MsG0880047448.01 | 0.831912 | 1.275622e-55 | 1.404020e-52 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780039258.01.T01 | MTR_7g069070 | 96.657 | 329 | 10 | 1 | 1 | 328 | 1 | 329 | 0.0 | 653 |
MsG0780039258.01.T01 | MTR_8g090295 | 38.308 | 201 | 117 | 2 | 125 | 323 | 71 | 266 | 2.24e-47 | 161 |
MsG0780039258.01.T01 | MTR_8g090295 | 35.714 | 126 | 74 | 2 | 125 | 248 | 71 | 191 | 2.98e-23 | 95.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780039258.01.T01 | AT3G08950 | 59.697 | 330 | 121 | 3 | 11 | 328 | 5 | 334 | 6.84e-131 | 377 |
MsG0780039258.01.T01 | AT4G39740 | 43.312 | 157 | 89 | 0 | 167 | 323 | 115 | 271 | 1.14e-43 | 151 |
Find 80 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAATGGACATTGATGTATTT+TGG | 0.139865 | 7:+60865040 | MsG0780039258.01.T01:CDS |
TAGATTGAGAAGCAAGTTTA+TGG | 0.154943 | 7:+60863489 | MsG0780039258.01.T01:intron |
TCAAACAGTGATTCTGATTC+TGG | 0.240238 | 7:+60863609 | MsG0780039258.01.T01:CDS |
AGTTCCTCGGGACAGATATC+TGG | 0.248240 | 7:-60865076 | None:intergenic |
GAGATATTGTCATTGAATTT+AGG | 0.255902 | 7:+60867024 | MsG0780039258.01.T01:three_prime_UTR |
CCAAAGTTGATTGGATTAAC+TGG | 0.296210 | 7:+60865946 | MsG0780039258.01.T01:CDS |
AATCTCCAAAATTATCTAAA+AGG | 0.303425 | 7:-60867099 | None:intergenic |
CGAGCATGTTACTTATTATA+CGG | 0.311040 | 7:-60866968 | None:intergenic |
ACTTGCTGATGGAGTAATTA+AGG | 0.318558 | 7:+60866937 | MsG0780039258.01.T01:CDS |
ATAAGGACTTCATGGGTAAA+TGG | 0.323446 | 7:+60865023 | MsG0780039258.01.T01:CDS |
AATTCTTTCCAGATACTTGA+TGG | 0.323856 | 7:+60866862 | MsG0780039258.01.T01:intron |
CTATCAGACGGTGGTTTATT+CGG | 0.331931 | 7:-60863579 | None:intergenic |
AGAAGAGAGGAAGTGGGTTT+GGG | 0.332337 | 7:-60863290 | None:intergenic |
AAGAAGAGAGGAAGTGGGTT+TGG | 0.336158 | 7:-60863291 | None:intergenic |
TAAAATGACATACATGACTA+TGG | 0.350804 | 7:-60866061 | None:intergenic |
AGAAGCAAGTTTATGGTAAT+GGG | 0.356500 | 7:+60863496 | MsG0780039258.01.T01:CDS |
CTGCGGGAAAAGCTGCGATT+GGG | 0.363194 | 7:+60864957 | MsG0780039258.01.T01:CDS |
GTAGCGGAAGAGGTTGGTTT+TGG | 0.370329 | 7:-60863231 | None:intergenic |
GTCATTGAATTTAGGCTTTG+TGG | 0.376294 | 7:+60867032 | MsG0780039258.01.T01:three_prime_UTR |
TGGGTTTGGGATTGCGAAGA+AGG | 0.378633 | 7:-60863277 | None:intergenic |
GAATTTCATCCAAAGTTGAT+TGG | 0.378707 | 7:+60865937 | MsG0780039258.01.T01:intron |
TAACATGCTCGCCTTGCTAT+TGG | 0.385843 | 7:+60866980 | MsG0780039258.01.T01:exon |
GAGAAGCAAGTTTATGGTAA+TGG | 0.410270 | 7:+60863495 | MsG0780039258.01.T01:CDS |
CTCCTTACAGAGGAGAAATC+TGG | 0.412185 | 7:+60865742 | MsG0780039258.01.T01:intron |
TGTAACTGATAAGGACTTCA+TGG | 0.424704 | 7:+60865015 | MsG0780039258.01.T01:CDS |
CCAGTTAATCCAATCAACTT+TGG | 0.424864 | 7:-60865946 | None:intergenic |
TGATGATTCGTAAGCTCAAA+TGG | 0.436005 | 7:-60864983 | None:intergenic |
AGCGAGAAGCGTAGCGGAAG+AGG | 0.436565 | 7:-60863241 | None:intergenic |
TGGTGAAAGAAGAGAGGAAG+TGG | 0.447234 | 7:-60863297 | None:intergenic |
TAATTGACGTCATTGTTCAA+TGG | 0.462850 | 7:+60867158 | MsG0780039258.01.T01:three_prime_UTR |
TGTTTCAGAGGTAGTTAAGC+AGG | 0.465407 | 7:+60864928 | MsG0780039258.01.T01:CDS |
TCTGCGGGAAAAGCTGCGAT+TGG | 0.466176 | 7:+60864956 | MsG0780039258.01.T01:CDS |
AGTGATTCTGATTCTGGTAA+AGG | 0.468239 | 7:+60863615 | MsG0780039258.01.T01:CDS |
ACAAAGCTCAACCAAGCAAC+CGG | 0.468889 | 7:-60863987 | None:intergenic |
CCAAGTCTAAAATAATTTGA+AGG | 0.469623 | 7:+60867070 | MsG0780039258.01.T01:three_prime_UTR |
CAGACGGTGGTTTATTCGGT+GGG | 0.472687 | 7:-60863575 | None:intergenic |
TACTAACTTCTGTAGTTCCT+CGG | 0.474104 | 7:-60865089 | None:intergenic |
GAAAAGAAACGACATATAGA+AGG | 0.474838 | 7:+60864056 | MsG0780039258.01.T01:CDS |
TCTGGTAAAGGAAAAGAGTC+TGG | 0.482957 | 7:+60863627 | MsG0780039258.01.T01:CDS |
TCTTTCACACCAACCTCGCC+AGG | 0.487138 | 7:+60863334 | MsG0780039258.01.T01:CDS |
AACTTCACAAATCCCATGTC+AGG | 0.490485 | 7:-60866887 | None:intergenic |
CGGGAAACGTGTAACTGATA+AGG | 0.502114 | 7:+60865006 | MsG0780039258.01.T01:CDS |
GAGAATGAACCTGGCGAGGT+TGG | 0.505718 | 7:-60863343 | None:intergenic |
TGCGGGAAAAGCTGCGATTG+GGG | 0.507996 | 7:+60864958 | MsG0780039258.01.T01:CDS |
ATACTTGATGGCACCTGACA+TGG | 0.521774 | 7:+60866874 | MsG0780039258.01.T01:CDS |
GTGTGTTGCAGCCGGTTGCT+TGG | 0.531202 | 7:+60863976 | MsG0780039258.01.T01:intron |
TGTTCAACAGTATCCCTCTC+AGG | 0.533850 | 7:-60865799 | None:intergenic |
GTTAAGCAGGGACCTTCTGC+GGG | 0.534373 | 7:+60864941 | MsG0780039258.01.T01:CDS |
TTATCTCTGTTGATCCTGAG+AGG | 0.545683 | 7:+60865785 | MsG0780039258.01.T01:CDS |
GTTCCTCGGGACAGATATCT+GGG | 0.552780 | 7:-60865075 | None:intergenic |
ACTAACTTCTGTAGTTCCTC+GGG | 0.554513 | 7:-60865088 | None:intergenic |
GAGTGATGGTGAAAGAAGAG+AGG | 0.554818 | 7:-60863303 | None:intergenic |
AGAAGCGTAGCGGAAGAGGT+TGG | 0.556250 | 7:-60863237 | None:intergenic |
GGTGAAAGAAGAGAGGAAGT+GGG | 0.558612 | 7:-60863296 | None:intergenic |
TATCTCTGTTGATCCTGAGA+GGG | 0.559192 | 7:+60865786 | MsG0780039258.01.T01:CDS |
GGTCGTTGATGCTGCATCAG+AGG | 0.573749 | 7:+60863517 | MsG0780039258.01.T01:CDS |
AGTTAAGCAGGGACCTTCTG+CGG | 0.574559 | 7:+60864940 | MsG0780039258.01.T01:CDS |
GATGTTGACTCACTTGCTGA+TGG | 0.579983 | 7:+60866926 | MsG0780039258.01.T01:CDS |
TCAGACGGTGGTTTATTCGG+TGG | 0.582076 | 7:-60863576 | None:intergenic |
CCTTCATTTCATCAAACACA+TGG | 0.590970 | 7:+60863193 | None:intergenic |
GAAGACAGCAGAGGAAGACT+CGG | 0.592685 | 7:+60866020 | MsG0780039258.01.T01:CDS |
TTTGATGAATTACTATCAGA+CGG | 0.595613 | 7:-60863591 | None:intergenic |
TTGAGCTTACGAATCATCAC+GGG | 0.601003 | 7:+60864987 | MsG0780039258.01.T01:CDS |
AGACGGTGGTTTATTCGGTG+GGG | 0.604822 | 7:-60863574 | None:intergenic |
GTAACTGATAAGGACTTCAT+GGG | 0.605698 | 7:+60865016 | MsG0780039258.01.T01:CDS |
AAGAAGTACTACCAATAGCA+AGG | 0.609770 | 7:-60866991 | None:intergenic |
GCGGGAAAAGCTGCGATTGG+GGG | 0.610060 | 7:+60864959 | MsG0780039258.01.T01:CDS |
GTTTCAGAGGTAGTTAAGCA+GGG | 0.611915 | 7:+60864929 | MsG0780039258.01.T01:CDS |
TTTGAGCTTACGAATCATCA+CGG | 0.614612 | 7:+60864986 | MsG0780039258.01.T01:CDS |
TACTTGATGGCACCTGACAT+GGG | 0.617481 | 7:+60866875 | MsG0780039258.01.T01:CDS |
AGAGAGAGCGAGAAGCGTAG+CGG | 0.620758 | 7:-60863247 | None:intergenic |
AGAAGAGAATGAACCTGGCG+AGG | 0.623470 | 7:-60863347 | None:intergenic |
GAAAGATGACGATAGAGTGA+TGG | 0.637253 | 7:-60863317 | None:intergenic |
AGATATACAAAATGTTTCAG+AGG | 0.642439 | 7:+60864916 | MsG0780039258.01.T01:intron |
GAGGGATACTGTTGAACAAG+TGG | 0.649326 | 7:+60865804 | MsG0780039258.01.T01:CDS |
TTATTATATGAAGACAGCAG+AGG | 0.675812 | 7:+60866011 | MsG0780039258.01.T01:CDS |
CTGCCCAGATATCTGTCCCG+AGG | 0.677827 | 7:+60865072 | MsG0780039258.01.T01:CDS |
CAAGTGGCTGAATATGTCAA+AGG | 0.681667 | 7:+60865820 | MsG0780039258.01.T01:CDS |
GATGAATTACTATCAGACGG+TGG | 0.700809 | 7:-60863588 | None:intergenic |
ATTGGTATATTACTATGACA+AGG | 0.715806 | 7:+60864034 | MsG0780039258.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTCATATATATTATACTATT+TGG | + | Chr7:60866091-60866110 | MsG0780039258.01.T01:intron | 10.0% |
!! | AAAACAATTTATAGCTAATA+TGG | - | Chr7:60865500-60865519 | None:intergenic | 15.0% |
!! | ATTGTACTTAAAAAAAGATT+AGG | + | Chr7:60867186-60867205 | MsG0780039258.01.T01:three_prime_UTR | 15.0% |
!! | TAGTATAATATATATGAAGT+AGG | - | Chr7:60866089-60866108 | None:intergenic | 15.0% |
!! | TTATTTAAAAATACAAGTAG+AGG | - | Chr7:60864471-60864490 | None:intergenic | 15.0% |
!! | TTGTACTTAAAAAAAGATTA+GGG | + | Chr7:60867187-60867206 | MsG0780039258.01.T01:three_prime_UTR | 15.0% |
!! | TTTATTCTTACATTTCAATT+GGG | + | Chr7:60863424-60863443 | MsG0780039258.01.T01:intron | 15.0% |
!!! | AATAAGATGGATATATTTTT+AGG | - | Chr7:60866695-60866714 | None:intergenic | 15.0% |
!!! | TAATATGATTTTTATGAGTT+CGG | + | Chr7:60863911-60863930 | MsG0780039258.01.T01:intron | 15.0% |
!!! | TAATTCCTTTTAGATAATTT+TGG | + | Chr7:60867094-60867113 | MsG0780039258.01.T01:three_prime_UTR | 15.0% |
!!! | TTATGATATCTAATCTTTTT+TGG | + | Chr7:60864353-60864372 | MsG0780039258.01.T01:intron | 15.0% |
!!! | TTTTATTCTTACATTTCAAT+TGG | + | Chr7:60863423-60863442 | MsG0780039258.01.T01:intron | 15.0% |
!! | AAATTATATGTAACTGACAT+AGG | + | Chr7:60866797-60866816 | MsG0780039258.01.T01:intron | 20.0% |
!! | AATCTCCAAAATTATCTAAA+AGG | - | Chr7:60867102-60867121 | None:intergenic | 20.0% |
!! | AATTACAATGTGAAAAAAAC+TGG | - | Chr7:60866305-60866324 | None:intergenic | 20.0% |
!! | AATTATATGTAACTGACATA+GGG | + | Chr7:60866798-60866817 | MsG0780039258.01.T01:intron | 20.0% |
!! | AGTAATTCGTCAAAAATATA+AGG | + | Chr7:60864698-60864717 | MsG0780039258.01.T01:intron | 20.0% |
!! | GAATAAAACAATGAAATTAG+AGG | - | Chr7:60863411-60863430 | None:intergenic | 20.0% |
!! | TAATATATAAGTATCCTTGT+AGG | + | Chr7:60866598-60866617 | MsG0780039258.01.T01:intron | 20.0% |
!! | TCCATTAATTGAAAAATCAA+TGG | - | Chr7:60866227-60866246 | None:intergenic | 20.0% |
!! | TGACTTATTTAAGCTTATAT+TGG | - | Chr7:60865604-60865623 | None:intergenic | 20.0% |
!! | TGATTGAATTTCAAATAGTT+TGG | + | Chr7:60864320-60864339 | MsG0780039258.01.T01:intron | 20.0% |
!! | TTTGCATTTAATTGTTAAAC+TGG | + | Chr7:60864543-60864562 | MsG0780039258.01.T01:intron | 20.0% |
!!! | ATGTTAATTGTATGTCTTTT+TGG | + | Chr7:60864156-60864175 | MsG0780039258.01.T01:intron | 20.0% |
!!! | ATTTTTAGGAATAGAAGTTT+AGG | - | Chr7:60866681-60866700 | None:intergenic | 20.0% |
!!! | CAATTTTCTCAGATTATTTT+TGG | + | Chr7:60863802-60863821 | MsG0780039258.01.T01:intron | 20.0% |
!!! | GAGATTTGACATTTTTAATA+GGG | + | Chr7:60867116-60867135 | MsG0780039258.01.T01:three_prime_UTR | 20.0% |
!!! | GGAATTTATTTTAGATGAAA+AGG | - | Chr7:60866262-60866281 | None:intergenic | 20.0% |
!!! | TGTTAATTGTATGTCTTTTT+GGG | + | Chr7:60864157-60864176 | MsG0780039258.01.T01:intron | 20.0% |
!!! | TTTGTTTTTCTGATTTTAAC+TGG | + | Chr7:60864005-60864024 | MsG0780039258.01.T01:CDS | 20.0% |
!!! | TTTTTAGGAATAGAAGTTTA+GGG | - | Chr7:60866680-60866699 | None:intergenic | 20.0% |
! | ACATACAATTAACATAGACA+TGG | - | Chr7:60864151-60864170 | None:intergenic | 25.0% |
! | AGATATACAAAATGTTTCAG+AGG | + | Chr7:60864916-60864935 | MsG0780039258.01.T01:intron | 25.0% |
! | AGGAAAAAATGAGATAGTAT+AGG | + | Chr7:60866128-60866147 | MsG0780039258.01.T01:intron | 25.0% |
! | ATATAGAAGGTAGATTACTA+TGG | + | Chr7:60864069-60864088 | MsG0780039258.01.T01:intron | 25.0% |
! | ATTGGTATATTACTATGACA+AGG | + | Chr7:60864034-60864053 | MsG0780039258.01.T01:CDS | 25.0% |
! | CTTCAAAGTTATGAATAAGA+TGG | - | Chr7:60866708-60866727 | None:intergenic | 25.0% |
! | GAATACAAAATTACTTGATC+TGG | - | Chr7:60864599-60864618 | None:intergenic | 25.0% |
! | GAGATATTGTCATTGAATTT+AGG | + | Chr7:60867024-60867043 | MsG0780039258.01.T01:three_prime_UTR | 25.0% |
! | TAAAATGACATACATGACTA+TGG | - | Chr7:60866064-60866083 | None:intergenic | 25.0% |
! | TAAGAAAATAATAAAGGGAC+AGG | - | Chr7:60864666-60864685 | None:intergenic | 25.0% |
! | TATAAACACTGCAAATTCAA+TGG | + | Chr7:60864573-60864592 | MsG0780039258.01.T01:intron | 25.0% |
! | TGAAATTAGAGGTAAAAAAG+TGG | - | Chr7:60863400-60863419 | None:intergenic | 25.0% |
! | TTAAATAAGTCAATCCAAAC+AGG | + | Chr7:60865612-60865631 | MsG0780039258.01.T01:intron | 25.0% |
! | TTGAAATATATCCATGCAAA+GGG | + | Chr7:60866404-60866423 | MsG0780039258.01.T01:intron | 25.0% |
! | TTGTTCACTGTATTATTGTT+TGG | + | Chr7:60864186-60864205 | MsG0780039258.01.T01:intron | 25.0% |
! | TTTGATGAATTACTATCAGA+CGG | - | Chr7:60863594-60863613 | None:intergenic | 25.0% |
!! | AAATGGACATTGATGTATTT+TGG | + | Chr7:60865040-60865059 | MsG0780039258.01.T01:CDS | 25.0% |
!! | CCAAGTCTAAAATAATTTGA+AGG | + | Chr7:60867070-60867089 | MsG0780039258.01.T01:three_prime_UTR | 25.0% |
!! | GATTTTATAGAATCTTAGCA+GGG | + | Chr7:60864735-60864754 | MsG0780039258.01.T01:intron | 25.0% |
!! | GGAGATTTGACATTTTTAAT+AGG | + | Chr7:60867115-60867134 | MsG0780039258.01.T01:three_prime_UTR | 25.0% |
!! | GGTTTTTATGATCAAATTGA+AGG | - | Chr7:60863379-60863398 | None:intergenic | 25.0% |
!! | TAGCTATAAATTGTTTTCAC+AGG | + | Chr7:60865503-60865522 | MsG0780039258.01.T01:intron | 25.0% |
!! | TGATTTTATAGAATCTTAGC+AGG | + | Chr7:60864734-60864753 | MsG0780039258.01.T01:intron | 25.0% |
!! | TTTGAAATATATCCATGCAA+AGG | + | Chr7:60866403-60866422 | MsG0780039258.01.T01:intron | 25.0% |
!!! | AATCTTTTTTGGTGTAAACT+GGG | + | Chr7:60864364-60864383 | MsG0780039258.01.T01:intron | 25.0% |
!!! | ACACTTTTTATATCTCATGT+TGG | + | Chr7:60865867-60865886 | MsG0780039258.01.T01:intron | 25.0% |
!!! | ACTAGTGTTTTAGATCTTAA+TGG | + | Chr7:60865661-60865680 | MsG0780039258.01.T01:intron | 25.0% |
!!! | CCTTCAAATTATTTTAGACT+TGG | - | Chr7:60867073-60867092 | None:intergenic | 25.0% |
!!! | GCCATTGATTTTTCAATTAA+TGG | + | Chr7:60866223-60866242 | MsG0780039258.01.T01:intron | 25.0% |
!!! | TAATCTTTTTTGGTGTAAAC+TGG | + | Chr7:60864363-60864382 | MsG0780039258.01.T01:intron | 25.0% |
!!! | TTATTTTAGATGAAAAGGTG+AGG | - | Chr7:60866257-60866276 | None:intergenic | 25.0% |
!!! | TTTTAGGAATAGAAGTTTAG+GGG | - | Chr7:60866679-60866698 | None:intergenic | 25.0% |
AAAAAAGAAGAGAATGAACC+TGG | - | Chr7:60863355-60863374 | None:intergenic | 30.0% | |
AATAAGTAAGTGTTTGTTCG+TGG | + | Chr7:60865126-60865145 | MsG0780039258.01.T01:intron | 30.0% | |
AATTCTTTCCAGATACTTGA+TGG | + | Chr7:60866862-60866881 | MsG0780039258.01.T01:intron | 30.0% | |
AGAAGCAAGTTTATGGTAAT+GGG | + | Chr7:60863496-60863515 | MsG0780039258.01.T01:CDS | 30.0% | |
CGGTGTTTGATATCTAATAA+CGG | + | Chr7:60864444-60864463 | MsG0780039258.01.T01:intron | 30.0% | |
GAAAAGAAACGACATATAGA+AGG | + | Chr7:60864056-60864075 | MsG0780039258.01.T01:CDS | 30.0% | |
GAAATTCAATCAGCATTATC+AGG | - | Chr7:60864312-60864331 | None:intergenic | 30.0% | |
GAGTTTATAGACATGTCATA+AGG | + | Chr7:60865536-60865555 | MsG0780039258.01.T01:intron | 30.0% | |
TAATTGACGTCATTGTTCAA+TGG | + | Chr7:60867158-60867177 | MsG0780039258.01.T01:three_prime_UTR | 30.0% | |
TAGATTGAGAAGCAAGTTTA+TGG | + | Chr7:60863489-60863508 | MsG0780039258.01.T01:intron | 30.0% | |
TCAAATTCATAGACAGAAAC+TGG | - | Chr7:60866342-60866361 | None:intergenic | 30.0% | |
TTATTATATGAAGACAGCAG+AGG | + | Chr7:60866011-60866030 | MsG0780039258.01.T01:CDS | 30.0% | |
TTTCACATTGTAATTGCTCT+TGG | + | Chr7:60866310-60866329 | MsG0780039258.01.T01:intron | 30.0% | |
TTTGGACATTCAATGAATCT+AGG | + | Chr7:60864204-60864223 | MsG0780039258.01.T01:intron | 30.0% | |
! | ATGGGATTTGTGAAGTTTTT+CGG | + | Chr7:60866893-60866912 | MsG0780039258.01.T01:CDS | 30.0% |
! | CACATTTCTCACATTTGTTA+AGG | + | Chr7:60866535-60866554 | MsG0780039258.01.T01:intron | 30.0% |
! | CGAGCATGTTACTTATTATA+CGG | - | Chr7:60866971-60866990 | None:intergenic | 30.0% |
! | GAATTTCATCCAAAGTTGAT+TGG | + | Chr7:60865937-60865956 | MsG0780039258.01.T01:intron | 30.0% |
!! | CAACACTTTTTATCTCATCT+GGG | - | Chr7:60865975-60865994 | None:intergenic | 30.0% |
!! | GGAATGAGGTTATTTGTTTT+TGG | + | Chr7:60863949-60863968 | MsG0780039258.01.T01:intron | 30.0% |
!! | GTTGTTTCTTAGTGATATCA+TGG | + | Chr7:60864855-60864874 | MsG0780039258.01.T01:intron | 30.0% |
!!! | ATTTGGCTTTCACTTTTAAC+AGG | + | Chr7:60866108-60866127 | MsG0780039258.01.T01:intron | 30.0% |
!!! | GTTTTTCTGATTTTAACTGG+AGG | + | Chr7:60864008-60864027 | MsG0780039258.01.T01:CDS | 30.0% |
AAAAACCAATTGACACGTCA+TGG | - | Chr7:60864521-60864540 | None:intergenic | 35.0% | |
AATTAATCCCCATCATGTCA+AGG | + | Chr7:60866446-60866465 | MsG0780039258.01.T01:intron | 35.0% | |
ACCACCAAGAAACAAAGATT+TGG | - | Chr7:60864812-60864831 | None:intergenic | 35.0% | |
AGTGATTCTGATTCTGGTAA+AGG | + | Chr7:60863615-60863634 | MsG0780039258.01.T01:CDS | 35.0% | |
ATAAGGACTTCATGGGTAAA+TGG | + | Chr7:60865023-60865042 | MsG0780039258.01.T01:CDS | 35.0% | |
ATTAATCCCCATCATGTCAA+GGG | + | Chr7:60866447-60866466 | MsG0780039258.01.T01:intron | 35.0% | |
ATTCACAAGAGATACATGTG+TGG | + | Chr7:60865260-60865279 | MsG0780039258.01.T01:intron | 35.0% | |
CACATGTTTCAGTATCATGT+CGG | - | Chr7:60863765-60863784 | None:intergenic | 35.0% | |
CCAGTTAATCCAATCAACTT+TGG | - | Chr7:60865949-60865968 | None:intergenic | 35.0% | |
GAGAAGCAAGTTTATGGTAA+TGG | + | Chr7:60863495-60863514 | MsG0780039258.01.T01:CDS | 35.0% | |
GATTACCAAAAATCTCTTCG+CGG | + | Chr7:60863672-60863691 | MsG0780039258.01.T01:CDS | 35.0% | |
GATTTAACTACTCTAGATCG+AGG | - | Chr7:60866283-60866302 | None:intergenic | 35.0% | |
GGATCAACAGAGATAAAAAC+TGG | - | Chr7:60865781-60865800 | None:intergenic | 35.0% | |
GTAACTGATAAGGACTTCAT+GGG | + | Chr7:60865016-60865035 | MsG0780039258.01.T01:CDS | 35.0% | |
GTCATTGAATTTAGGCTTTG+TGG | + | Chr7:60867032-60867051 | MsG0780039258.01.T01:three_prime_UTR | 35.0% | |
GTGGATAAGATATATGCATG+TGG | + | Chr7:60864111-60864130 | MsG0780039258.01.T01:intron | 35.0% | |
TAATAAAGGGACAGGATCAT+AGG | - | Chr7:60864658-60864677 | None:intergenic | 35.0% | |
TACTAACTTCTGTAGTTCCT+CGG | - | Chr7:60865092-60865111 | None:intergenic | 35.0% | |
TCAAACAGTGATTCTGATTC+TGG | + | Chr7:60863609-60863628 | MsG0780039258.01.T01:CDS | 35.0% | |
TGATGATTCGTAAGCTCAAA+TGG | - | Chr7:60864986-60865005 | None:intergenic | 35.0% | |
TGTAACTGATAAGGACTTCA+TGG | + | Chr7:60865015-60865034 | MsG0780039258.01.T01:CDS | 35.0% | |
TTCACAAGAGATACATGTGT+GGG | + | Chr7:60865261-60865280 | MsG0780039258.01.T01:intron | 35.0% | |
TTTGAGCTTACGAATCATCA+CGG | + | Chr7:60864986-60865005 | MsG0780039258.01.T01:CDS | 35.0% | |
! | ACTTGCTGATGGAGTAATTA+AGG | + | Chr7:60866937-60866956 | MsG0780039258.01.T01:CDS | 35.0% |
! | ATTGTTTTCACAGGCTATCA+TGG | + | Chr7:60865512-60865531 | MsG0780039258.01.T01:intron | 35.0% |
! | CATGCCAAATCTTTGTTTCT+TGG | + | Chr7:60864805-60864824 | MsG0780039258.01.T01:intron | 35.0% |
! | CCAAAGTTGATTGGATTAAC+TGG | + | Chr7:60865946-60865965 | MsG0780039258.01.T01:CDS | 35.0% |
! | CTCACATTTGTTAAGGACTT+GGG | + | Chr7:60866542-60866561 | MsG0780039258.01.T01:intron | 35.0% |
! | TCTCACATTTGTTAAGGACT+TGG | + | Chr7:60866541-60866560 | MsG0780039258.01.T01:intron | 35.0% |
! | TGAGTTAGTTGAGTGTTTTG+TGG | + | Chr7:60864092-60864111 | MsG0780039258.01.T01:intron | 35.0% |
!! | AAGAAGTACTACCAATAGCA+AGG | - | Chr7:60866994-60867013 | None:intergenic | 35.0% |
!! | ACACTGACACTTTTGATTGA+AGG | + | Chr7:60863734-60863753 | MsG0780039258.01.T01:intron | 35.0% |
!! | ATTAGTCTTTGCAGTTGTAG+CGG | - | Chr7:60864396-60864415 | None:intergenic | 35.0% |
!! | GAAAGAGAATCAGTTGATAG+AGG | - | Chr7:60866751-60866770 | None:intergenic | 35.0% |
!! | GCAACACTTTTTATCTCATC+TGG | - | Chr7:60865976-60865995 | None:intergenic | 35.0% |
!! | TTTGAGTTGTACTTGGAATG+AGG | + | Chr7:60863935-60863954 | MsG0780039258.01.T01:intron | 35.0% |
!!! | TTTCTGATTTTAACTGGAGG+TGG | + | Chr7:60864011-60864030 | MsG0780039258.01.T01:CDS | 35.0% |
AAATTGAGTCACAGCTCACA+GGG | - | Chr7:60866655-60866674 | None:intergenic | 40.0% | |
AACTTCACAAATCCCATGTC+AGG | - | Chr7:60866890-60866909 | None:intergenic | 40.0% | |
ACTAACTTCTGTAGTTCCTC+GGG | - | Chr7:60865091-60865110 | None:intergenic | 40.0% | |
ATATCAAACACCGCCCATTT+GGG | - | Chr7:60864437-60864456 | None:intergenic | 40.0% | |
ATGCATTCCCTTGACATGAT+GGG | - | Chr7:60866457-60866476 | None:intergenic | 40.0% | |
CAAGTGGCTGAATATGTCAA+AGG | + | Chr7:60865820-60865839 | MsG0780039258.01.T01:CDS | 40.0% | |
CACTAGTATGCTTTCTCATG+TGG | - | Chr7:60865648-60865667 | None:intergenic | 40.0% | |
CTATCAGACGGTGGTTTATT+CGG | - | Chr7:60863582-60863601 | None:intergenic | 40.0% | |
GAAAGATGACGATAGAGTGA+TGG | - | Chr7:60863320-60863339 | None:intergenic | 40.0% | |
GATGAATTACTATCAGACGG+TGG | - | Chr7:60863591-60863610 | None:intergenic | 40.0% | |
GCTTTCTCATGTGGTCTTTA+AGG | - | Chr7:60865639-60865658 | None:intergenic | 40.0% | |
GGGTTAGATGGCAATAATGA+TGG | + | Chr7:60865288-60865307 | MsG0780039258.01.T01:intron | 40.0% | |
GTTTCAGAGGTAGTTAAGCA+GGG | + | Chr7:60864929-60864948 | MsG0780039258.01.T01:CDS | 40.0% | |
TAACACCACTGAGACTGTTT+GGG | - | Chr7:60865578-60865597 | None:intergenic | 40.0% | |
TAATGCCATGACGTGTCAAT+TGG | + | Chr7:60864513-60864532 | MsG0780039258.01.T01:intron | 40.0% | |
TACAAAGCTTACCCTTTGCA+TGG | - | Chr7:60866418-60866437 | None:intergenic | 40.0% | |
TATCTCTGTTGATCCTGAGA+GGG | + | Chr7:60865786-60865805 | MsG0780039258.01.T01:CDS | 40.0% | |
TATGCATTCCCTTGACATGA+TGG | - | Chr7:60866458-60866477 | None:intergenic | 40.0% | |
TCTGGTAAAGGAAAAGAGTC+TGG | + | Chr7:60863627-60863646 | MsG0780039258.01.T01:CDS | 40.0% | |
TGAAGCTTCAAGTGCTTTGT+TGG | + | Chr7:60865314-60865333 | MsG0780039258.01.T01:intron | 40.0% | |
TGCATGAGTTGTCAGAACTT+AGG | + | Chr7:60865387-60865406 | MsG0780039258.01.T01:intron | 40.0% | |
TGTCTTACGTCAGCATATGT+TGG | + | Chr7:60866490-60866509 | MsG0780039258.01.T01:intron | 40.0% | |
TGTTTCAGAGGTAGTTAAGC+AGG | + | Chr7:60864928-60864947 | MsG0780039258.01.T01:CDS | 40.0% | |
TTAACACCACTGAGACTGTT+TGG | - | Chr7:60865579-60865598 | None:intergenic | 40.0% | |
TTATCTCTGTTGATCCTGAG+AGG | + | Chr7:60865785-60865804 | MsG0780039258.01.T01:CDS | 40.0% | |
TTCCAGATTTCTCCTCTGTA+AGG | - | Chr7:60865747-60865766 | None:intergenic | 40.0% | |
TTGAGCTTACGAATCATCAC+GGG | + | Chr7:60864987-60865006 | MsG0780039258.01.T01:CDS | 40.0% | |
! | ACTAATCCCTTGAGCTTTGT+GGG | + | Chr7:60864410-60864429 | MsG0780039258.01.T01:intron | 40.0% |
! | CAGGGTCAATTCTTGTTTGA+GGG | + | Chr7:60864753-60864772 | MsG0780039258.01.T01:intron | 40.0% |
! | CGGTGTGTATCTGAAACTAT+TGG | + | Chr7:60863697-60863716 | MsG0780039258.01.T01:intron | 40.0% |
! | CTCATGTTGGTTATTTGCTG+CGG | + | Chr7:60865880-60865899 | MsG0780039258.01.T01:intron | 40.0% |
! | GCCAAATCTTTGTTTCTTGG+TGG | + | Chr7:60864808-60864827 | MsG0780039258.01.T01:intron | 40.0% |
! | TCTCTTTTGTCTCCTTACAG+AGG | + | Chr7:60865732-60865751 | MsG0780039258.01.T01:intron | 40.0% |
! | TGAGTTGAATTCCTACCAAC+TGG | - | Chr7:60866517-60866536 | None:intergenic | 40.0% |
!! | GAGATAGTATAGGTGTTGAC+TGG | + | Chr7:60866138-60866157 | MsG0780039258.01.T01:intron | 40.0% |
!! | GTTCGGATTTGAGTTGTACT+TGG | + | Chr7:60863928-60863947 | MsG0780039258.01.T01:intron | 40.0% |
!!! | GATTTTAACTGGAGGTGGAT+TGG | + | Chr7:60864016-60864035 | MsG0780039258.01.T01:CDS | 40.0% |
!!! | GTTGGTTTTGGTGGATATCA+TGG | - | Chr7:60863222-60863241 | None:intergenic | 40.0% |
AAGAGATACATGTGTGGGCT+TGG | + | Chr7:60865266-60865285 | MsG0780039258.01.T01:intron | 45.0% | |
ACAAAGCTCAACCAAGCAAC+CGG | - | Chr7:60863990-60864009 | None:intergenic | 45.0% | |
AGACTGTTTGGGAGAGCTTA+TGG | - | Chr7:60865567-60865586 | None:intergenic | 45.0% | |
AGAGATACATGTGTGGGCTT+GGG | + | Chr7:60865267-60865286 | MsG0780039258.01.T01:intron | 45.0% | |
AGGCTCAGAAAACACCTACA+AGG | - | Chr7:60866615-60866634 | None:intergenic | 45.0% | |
CAAATTGAGTCACAGCTCAC+AGG | - | Chr7:60866656-60866675 | None:intergenic | 45.0% | |
CATATGTTGGTCCAGTTGGT+AGG | + | Chr7:60866503-60866522 | MsG0780039258.01.T01:intron | 45.0% | |
CCAAAAATCTCTTCGCGGAT+CGG | + | Chr7:60863677-60863696 | MsG0780039258.01.T01:CDS | 45.0% | |
CGGGAAACGTGTAACTGATA+AGG | + | Chr7:60865006-60865025 | MsG0780039258.01.T01:CDS | 45.0% | |
CTCCTTACAGAGGAGAAATC+TGG | + | Chr7:60865742-60865761 | MsG0780039258.01.T01:intron | 45.0% | |
GACTAATCCCTTGAGCTTTG+TGG | + | Chr7:60864409-60864428 | MsG0780039258.01.T01:intron | 45.0% | |
GAGGGATACTGTTGAACAAG+TGG | + | Chr7:60865804-60865823 | MsG0780039258.01.T01:CDS | 45.0% | |
GATATCAAACACCGCCCATT+TGG | - | Chr7:60864438-60864457 | None:intergenic | 45.0% | |
GGTGAAAGAAGAGAGGAAGT+GGG | - | Chr7:60863299-60863318 | None:intergenic | 45.0% | |
TCAGCATATGTTGGTCCAGT+TGG | + | Chr7:60866499-60866518 | MsG0780039258.01.T01:intron | 45.0% | |
TGCATTCCCTTGACATGATG+GGG | - | Chr7:60866456-60866475 | None:intergenic | 45.0% | |
TGGGTTTCAATCTCCTTGTG+AGG | + | Chr7:60866561-60866580 | MsG0780039258.01.T01:intron | 45.0% | |
TGGTGAAAGAAGAGAGGAAG+TGG | - | Chr7:60863300-60863319 | None:intergenic | 45.0% | |
TGTTCAACAGTATCCCTCTC+AGG | - | Chr7:60865802-60865821 | None:intergenic | 45.0% | |
TTGGTATTGTGTGTTGCAGC+CGG | + | Chr7:60863968-60863987 | MsG0780039258.01.T01:intron | 45.0% | |
! | AAGAAGAGAGGAAGTGGGTT+TGG | - | Chr7:60863294-60863313 | None:intergenic | 45.0% |
! | AGAAGAGAGGAAGTGGGTTT+GGG | - | Chr7:60863293-60863312 | None:intergenic | 45.0% |
! | ATACTTGATGGCACCTGACA+TGG | + | Chr7:60866874-60866893 | MsG0780039258.01.T01:CDS | 45.0% |
! | GAGTGATGGTGAAAGAAGAG+AGG | - | Chr7:60863306-60863325 | None:intergenic | 45.0% |
! | GCAGGGTCAATTCTTGTTTG+AGG | + | Chr7:60864752-60864771 | MsG0780039258.01.T01:intron | 45.0% |
! | GTCAGAACTTAGGCACTGTT+TGG | + | Chr7:60865397-60865416 | MsG0780039258.01.T01:intron | 45.0% |
! | GTGGTCTTTAAGGACCTGTT+TGG | - | Chr7:60865629-60865648 | None:intergenic | 45.0% |
! | TAACATGCTCGCCTTGCTAT+TGG | + | Chr7:60866980-60866999 | MsG0780039258.01.T01:exon | 45.0% |
! | TACTTGATGGCACCTGACAT+GGG | + | Chr7:60866875-60866894 | MsG0780039258.01.T01:CDS | 45.0% |
! | TAGGTGTTTTCTGAGCCTTG+AGG | + | Chr7:60866617-60866636 | MsG0780039258.01.T01:intron | 45.0% |
!! | GATGTTGACTCACTTGCTGA+TGG | + | Chr7:60866926-60866945 | MsG0780039258.01.T01:CDS | 45.0% |
!! | ATAATATAAGAAAATAATAA+AGG | - | Chr7:60864672-60864691 | None:intergenic | 5.0% |
!! | TAATATAAGAAAATAATAAA+GGG | - | Chr7:60864671-60864690 | None:intergenic | 5.0% |
AGAAGAGAATGAACCTGGCG+AGG | - | Chr7:60863350-60863369 | None:intergenic | 50.0% | |
AGTCTTTGCAGTTGTAGCGG+AGG | - | Chr7:60864393-60864412 | None:intergenic | 50.0% | |
AGTTAAGCAGGGACCTTCTG+CGG | + | Chr7:60864940-60864959 | MsG0780039258.01.T01:CDS | 50.0% | |
AGTTCCTCGGGACAGATATC+TGG | - | Chr7:60865079-60865098 | None:intergenic | 50.0% | |
CAGACGGTGGTTTATTCGGT+GGG | - | Chr7:60863578-60863597 | None:intergenic | 50.0% | |
GAAGACAGCAGAGGAAGACT+CGG | + | Chr7:60866020-60866039 | MsG0780039258.01.T01:CDS | 50.0% | |
GAGATACATGTGTGGGCTTG+GGG | + | Chr7:60865268-60865287 | MsG0780039258.01.T01:intron | 50.0% | |
GTTCCTCGGGACAGATATCT+GGG | - | Chr7:60865078-60865097 | None:intergenic | 50.0% | |
TCACAGCTCACAGGGCTATA+GGG | - | Chr7:60866647-60866666 | None:intergenic | 50.0% | |
TCAGACGGTGGTTTATTCGG+TGG | - | Chr7:60863579-60863598 | None:intergenic | 50.0% | |
TCTCCTTGTGAGGAACTCGT+TGG | + | Chr7:60866571-60866590 | MsG0780039258.01.T01:intron | 50.0% | |
TTGGGTCCCACAAAGCTCAA+GGG | - | Chr7:60864419-60864438 | None:intergenic | 50.0% | |
TTTGGGTCCCACAAAGCTCA+AGG | - | Chr7:60864420-60864439 | None:intergenic | 50.0% | |
! | AGACGGTGGTTTATTCGGTG+GGG | - | Chr7:60863577-60863596 | None:intergenic | 50.0% |
! | CCGATCCGCGAAGAGATTTT+TGG | - | Chr7:60863680-60863699 | None:intergenic | 50.0% |
! | GAGCTTTGTGGGACCCAAAT+GGG | + | Chr7:60864421-60864440 | MsG0780039258.01.T01:intron | 50.0% |
! | GTCAGGTGCCATCAAGTATC+TGG | - | Chr7:60866873-60866892 | None:intergenic | 50.0% |
! | TGAGCTTTGTGGGACCCAAA+TGG | + | Chr7:60864420-60864439 | MsG0780039258.01.T01:intron | 50.0% |
! | TGGGTTTGGGATTGCGAAGA+AGG | - | Chr7:60863280-60863299 | None:intergenic | 50.0% |
!!! | GTAGCGGAAGAGGTTGGTTT+TGG | - | Chr7:60863234-60863253 | None:intergenic | 50.0% |
CACAGCTCACAGGGCTATAG+GGG | - | Chr7:60866646-60866665 | None:intergenic | 55.0% | |
CTGCCAACGAGTTCCTCACA+AGG | - | Chr7:60866577-60866596 | None:intergenic | 55.0% | |
CTGCGGGAAAAGCTGCGATT+GGG | + | Chr7:60864957-60864976 | MsG0780039258.01.T01:CDS | 55.0% | |
CTTTGTGGGACCCAAATGGG+CGG | + | Chr7:60864424-60864443 | MsG0780039258.01.T01:intron | 55.0% | |
GAGAATGAACCTGGCGAGGT+TGG | - | Chr7:60863346-60863365 | None:intergenic | 55.0% | |
GCTCTCCCAAACAGTCTCAG+TGG | + | Chr7:60865570-60865589 | MsG0780039258.01.T01:intron | 55.0% | |
GGTCGTTGATGCTGCATCAG+AGG | + | Chr7:60863517-60863536 | MsG0780039258.01.T01:CDS | 55.0% | |
GTCACAGCTCACAGGGCTAT+AGG | - | Chr7:60866648-60866667 | None:intergenic | 55.0% | |
GTTAAGCAGGGACCTTCTGC+GGG | + | Chr7:60864941-60864960 | MsG0780039258.01.T01:CDS | 55.0% | |
TCTGCGGGAAAAGCTGCGAT+TGG | + | Chr7:60864956-60864975 | MsG0780039258.01.T01:CDS | 55.0% | |
TCTTTCACACCAACCTCGCC+AGG | + | Chr7:60863334-60863353 | MsG0780039258.01.T01:CDS | 55.0% | |
TGCGGGAAAAGCTGCGATTG+GGG | + | Chr7:60864958-60864977 | MsG0780039258.01.T01:CDS | 55.0% | |
TGTGTGGGCTTGGGGTTAGA+TGG | + | Chr7:60865276-60865295 | MsG0780039258.01.T01:intron | 55.0% | |
! | AGAAGCGTAGCGGAAGAGGT+TGG | - | Chr7:60863240-60863259 | None:intergenic | 55.0% |
! | AGAGAGAGCGAGAAGCGTAG+CGG | - | Chr7:60863250-60863269 | None:intergenic | 55.0% |
! | ATCGCAGCTTTTCCCGCAGA+AGG | - | Chr7:60864956-60864975 | None:intergenic | 55.0% |
!!! | GCGGAAGAGGTTGGTTTTGG+TGG | - | Chr7:60863231-60863250 | None:intergenic | 55.0% |
CTGCCCAGATATCTGTCCCG+AGG | + | Chr7:60865072-60865091 | MsG0780039258.01.T01:CDS | 60.0% | |
GCGGGAAAAGCTGCGATTGG+GGG | + | Chr7:60864959-60864978 | MsG0780039258.01.T01:CDS | 60.0% | |
GGGCTATAGGGGAAGCCTCA+AGG | - | Chr7:60866635-60866654 | None:intergenic | 60.0% | |
GTGTGTTGCAGCCGGTTGCT+TGG | + | Chr7:60863976-60863995 | MsG0780039258.01.T01:intron | 60.0% | |
! | AGCGAGAAGCGTAGCGGAAG+AGG | - | Chr7:60863244-60863263 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 60863203 | 60867267 | 60863203 | ID=MsG0780039258.01;Name=MsG0780039258.01 |
Chr7 | mRNA | 60863203 | 60867267 | 60863203 | ID=MsG0780039258.01.T01;Parent=MsG0780039258.01;Name=MsG0780039258.01.T01;_AED=0.35;_eAED=0.35;_QI=9|1|1|1|1|1|7|285|328 |
Chr7 | exon | 60863203 | 60863355 | 60863203 | ID=MsG0780039258.01.T01:exon:8551;Parent=MsG0780039258.01.T01 |
Chr7 | exon | 60863492 | 60863698 | 60863492 | ID=MsG0780039258.01.T01:exon:8552;Parent=MsG0780039258.01.T01 |
Chr7 | exon | 60863987 | 60864077 | 60863987 | ID=MsG0780039258.01.T01:exon:8553;Parent=MsG0780039258.01.T01 |
Chr7 | exon | 60864918 | 60865130 | 60864918 | ID=MsG0780039258.01.T01:exon:8554;Parent=MsG0780039258.01.T01 |
Chr7 | exon | 60865752 | 60865841 | 60865752 | ID=MsG0780039258.01.T01:exon:8555;Parent=MsG0780039258.01.T01 |
Chr7 | exon | 60865938 | 60866070 | 60865938 | ID=MsG0780039258.01.T01:exon:8556;Parent=MsG0780039258.01.T01 |
Chr7 | exon | 60866874 | 60867267 | 60866874 | ID=MsG0780039258.01.T01:exon:8557;Parent=MsG0780039258.01.T01 |
Chr7 | five_prime_UTR | 60863203 | 60863211 | 60863203 | ID=MsG0780039258.01.T01:five_prime_utr;Parent=MsG0780039258.01.T01 |
Chr7 | CDS | 60863212 | 60863355 | 60863212 | ID=MsG0780039258.01.T01:cds;Parent=MsG0780039258.01.T01 |
Chr7 | CDS | 60863492 | 60863698 | 60863492 | ID=MsG0780039258.01.T01:cds;Parent=MsG0780039258.01.T01 |
Chr7 | CDS | 60863987 | 60864077 | 60863987 | ID=MsG0780039258.01.T01:cds;Parent=MsG0780039258.01.T01 |
Chr7 | CDS | 60864918 | 60865130 | 60864918 | ID=MsG0780039258.01.T01:cds;Parent=MsG0780039258.01.T01 |
Chr7 | CDS | 60865752 | 60865841 | 60865752 | ID=MsG0780039258.01.T01:cds;Parent=MsG0780039258.01.T01 |
Chr7 | CDS | 60865938 | 60866070 | 60865938 | ID=MsG0780039258.01.T01:cds;Parent=MsG0780039258.01.T01 |
Chr7 | CDS | 60866874 | 60866982 | 60866874 | ID=MsG0780039258.01.T01:cds;Parent=MsG0780039258.01.T01 |
Chr7 | three_prime_UTR | 60866983 | 60867267 | 60866983 | ID=MsG0780039258.01.T01:three_prime_utr;Parent=MsG0780039258.01.T01 |
Gene Sequence |
Protein sequence |