AlfalfaGEDB | MsG0580025575.01

M. sativa cultivar ZhongmuNo.1 / MsG0580025575.01

KEGG: -
GO: GO:0046983
PFAM: PF00010

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025575.01.T01	XP_003612938.1	97.659	299	5	1	1	297	1	299	0	593

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025575.01.T01	Q9LSL1	69.942	173	46	2	129	295	151	323	3.83E-70	225

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025575.01.T01	A9YWR2	97.659	299	5	1	1	297	1	299	0.0	593

TFs/TRs:

Gene ID	Type	Classification
MsG0580025575.01.T01	TF	bHLH

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080049112.01	MsG0580025575.01	0.865837	4.420511e-65	1.458757e-61
MsG0180004124.01	MsG0580025575.01	-0.823158	1.610537e-53	1.375800e-50
MsG0180004125.01	MsG0580025575.01	-0.819164	1.341135e-52	1.024159e-49
MsG0180004559.01	MsG0580025575.01	0.814459	1.524576e-51	1.023558e-48
MsG0180004731.01	MsG0580025575.01	-0.805443	1.331829e-49	7.046912e-47
MsG0280010794.01	MsG0580025575.01	0.831104	2.016807e-55	2.166953e-52
MsG0480018788.01	MsG0580025575.01	-0.806667	7.358008e-50	4.016967e-47
MsG0480023324.01	MsG0580025575.01	0.839541	1.489636e-57	2.063453e-54
MsG0580025575.01	MsG0580026160.01	0.802842	4.630808e-49	2.291983e-46
MsG0580025575.01	MsG0580028330.01	0.815971	7.030932e-52	4.918842e-49
MsG0580025575.01	MsG0580029023.01	0.811664	6.252047e-51	3.892924e-48
MsG0580025575.01	MsG0780038837.01	0.814044	1.881971e-51	1.249381e-48
MsG0580025575.01	MsG0780040266.01	0.820742	5.839140e-53	4.659252e-50
MsG0580025575.01	MsG0780040460.01	0.801111	1.050421e-48	4.975357e-46
MsG0580025575.01	MsG0880042860.01	0.833370	5.546227e-56	6.374412e-53
MsG0580025575.01	MsG0880046053.01	0.847298	1.263316e-59	2.235152e-56
MsG0580025575.01	MsG0880046947.01	0.839054	1.993125e-57	2.720147e-54
MsG0380017231.01	MsG0580025575.01	0.807411	5.120871e-50	2.850331e-47
MsG0380017730.01	MsG0580025575.01	0.844653	6.616504e-59	1.075391e-55
MsG0380017935.01	MsG0580025575.01	-0.826727	2.315129e-54	2.189063e-51
MsG0280007896.01	MsG0580025575.01	0.810751	9.864568e-51	5.996254e-48
MsG0280010173.01	MsG0580025575.01	0.805643	1.209050e-49	6.430330e-47
MsG0280010227.01	MsG0580025575.01	-0.812447	4.220715e-51	2.684421e-48
MsG0280010355.01	MsG0580025575.01	-0.810992	8.748791e-51	5.352849e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025575.01.T01	MTR_5g030770	97.659	299	5	1	1	297	1	299	0.0	593
MsG0580025575.01.T01	MTR_5g030770	95.652	299	5	2	1	297	1	293	0.0	574
MsG0580025575.01.T01	MTR_7g076840	72.054	297	17	5	5	301	2	232	3.21e-130	372
MsG0580025575.01.T01	MTR_3g111290	51.724	319	120	15	1	295	1	309	1.54e-77	241
MsG0580025575.01.T01	MTR_3g498695	47.753	178	68	5	140	295	287	461	5.58e-37	138
MsG0580025575.01.T01	MTR_7g083900	47.826	161	59	4	152	289	284	442	2.16e-36	137
MsG0580025575.01.T01	MTR_7g083900	47.826	161	59	4	152	289	284	442	2.28e-36	137
MsG0580025575.01.T01	MTR_3g498695	48.521	169	65	4	140	289	287	452	2.41e-36	137
MsG0580025575.01.T01	MTR_3g030700	44.578	166	73	6	139	289	184	345	5.09e-33	125
MsG0580025575.01.T01	MTR_7g065690	48.649	148	36	6	30	177	26	133	7.48e-33	119
MsG0580025575.01.T01	MTR_3g104100	42.675	157	71	5	152	289	193	349	2.56e-30	119
MsG0580025575.01.T01	MTR_2g081040	43.312	157	70	5	152	289	175	331	1.28e-29	116
MsG0580025575.01.T01	MTR_1g112680	54.795	73	33	0	140	212	303	375	3.28e-19	88.6
MsG0580025575.01.T01	MTR_8g064700	27.976	168	101	3	138	285	222	389	5.89e-14	72.8
MsG0580025575.01.T01	MTR_5g014640	28.758	153	103	2	140	286	140	292	6.68e-14	72.0
MsG0580025575.01.T01	MTR_2g038040	33.758	157	82	4	150	284	48	204	7.96e-14	70.5
MsG0580025575.01.T01	MTR_1g072320	30.994	171	95	4	138	286	449	618	1.13e-13	72.4
MsG0580025575.01.T01	MTR_2g084280	33.813	139	74	4	147	273	126	258	1.78e-13	70.5
MsG0580025575.01.T01	MTR_4g092700	25.818	275	159	12	32	294	60	301	1.90e-13	70.5
MsG0580025575.01.T01	MTR_4g057270	49.275	69	30	1	142	210	142	205	2.05e-13	70.5
MsG0580025575.01.T01	MTR_8g027495	29.240	171	110	4	147	311	453	618	2.30e-13	71.2
MsG0580025575.01.T01	MTR_8g024790	29.801	151	92	4	152	290	289	437	3.94e-13	70.1
MsG0580025575.01.T01	MTR_5g030430	28.000	175	103	3	139	293	481	652	4.75e-13	70.5
MsG0580025575.01.T01	MTR_2g010450	27.778	162	101	4	144	289	161	322	6.02e-13	69.3
MsG0580025575.01.T01	MTR_2g104560	27.439	164	102	4	143	293	41	200	8.99e-13	67.4
MsG0580025575.01.T01	MTR_8g024770	30.872	149	86	4	152	285	277	423	1.30e-12	68.6
MsG0580025575.01.T01	MTR_5g014520	30.464	151	96	2	145	286	148	298	1.45e-12	67.8
MsG0580025575.01.T01	MTR_7g096350	35.789	95	59	1	151	243	352	446	1.73e-12	68.6
MsG0580025575.01.T01	MTR_7g117670	28.261	138	96	2	151	286	399	535	2.01e-12	68.2
MsG0580025575.01.T01	MTR_8g067280	28.571	175	102	5	139	293	450	621	3.72e-12	67.4
MsG0580025575.01.T01	MTR_6g047550	41.860	86	44	3	131	212	148	231	3.58e-11	63.2
MsG0580025575.01.T01	MTR_4g066460	32.500	160	92	4	141	289	142	296	4.17e-11	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580025575.01.T01	AT5G65640	69.942	173	46	2	129	295	151	323	3.90e-71	225
MsG0580025575.01.T01	AT5G10570	46.708	319	115	11	11	302	4	294	1.08e-64	207
MsG0580025575.01.T01	AT1G12860	48.750	160	67	3	152	296	265	424	3.39e-37	138
MsG0580025575.01.T01	AT1G12860	43.814	194	82	4	152	330	265	446	5.97e-37	138
MsG0580025575.01.T01	AT3G26744	47.561	164	67	2	152	296	305	468	2.29e-36	137
MsG0580025575.01.T01	AT5G65640	65.041	123	36	3	129	245	151	272	6.36e-36	132
MsG0580025575.01.T01	AT3G26744	48.408	157	62	2	152	289	305	461	9.13e-36	135
MsG0580025575.01.T01	AT3G26744	48.408	157	62	2	152	289	305	461	9.13e-36	135
MsG0580025575.01.T01	AT3G26744	48.408	157	62	2	152	289	305	461	9.13e-36	135
MsG0580025575.01.T01	AT2G16910	36.774	155	67	4	153	276	313	467	2.24e-20	92.4
MsG0580025575.01.T01	AT4G09820	32.432	148	88	2	144	291	353	488	1.11e-16	81.3
MsG0580025575.01.T01	AT4G29930	35.036	137	83	2	153	284	53	188	1.51e-15	75.1
MsG0580025575.01.T01	AT4G29930	32.620	187	102	6	153	320	53	234	1.96e-15	75.1
MsG0580025575.01.T01	AT4G29930	36.232	138	77	4	153	284	53	185	4.14e-15	73.9
MsG0580025575.01.T01	AT4G29930	51.667	60	29	0	153	212	53	112	2.77e-14	70.9
MsG0580025575.01.T01	AT5G46760	31.646	158	91	4	151	293	412	567	3.33e-14	73.9
MsG0580025575.01.T01	AT4G29930	51.667	60	29	0	153	212	53	112	5.99e-14	71.2
MsG0580025575.01.T01	AT4G29930	51.667	60	29	0	153	212	53	112	7.39e-14	70.9
MsG0580025575.01.T01	AT4G29930	51.667	60	29	0	153	212	53	112	7.39e-14	70.9
MsG0580025575.01.T01	AT2G46510	36.522	115	61	4	139	253	383	485	8.93e-14	72.4
MsG0580025575.01.T01	AT4G17880	30.120	166	98	4	139	292	404	563	9.49e-14	72.4
MsG0580025575.01.T01	AT4G37850	29.064	203	124	6	100	284	93	293	1.20e-13	71.2
MsG0580025575.01.T01	AT4G37850	29.064	203	124	6	100	284	93	293	1.20e-13	71.2
MsG0580025575.01.T01	AT2G28160	44.444	72	35	1	139	210	121	187	1.29e-12	67.8
MsG0580025575.01.T01	AT2G28160	44.444	72	35	1	139	210	121	187	1.29e-12	68.2
MsG0580025575.01.T01	AT1G63650	28.962	183	96	6	155	306	406	585	2.44e-12	68.2
MsG0580025575.01.T01	AT1G63650	28.962	183	96	6	155	306	406	585	2.44e-12	68.2
MsG0580025575.01.T01	AT1G63650	28.962	183	96	6	155	306	406	585	2.44e-12	68.2
MsG0580025575.01.T01	AT1G10610	42.308	78	43	1	149	226	229	304	5.90e-12	66.6
MsG0580025575.01.T01	AT1G10610	43.243	74	40	1	153	226	166	237	6.50e-12	66.2
MsG0580025575.01.T01	AT2G22760	28.221	163	100	5	155	302	120	280	6.86e-12	65.5
MsG0580025575.01.T01	AT5G57150	28.834	163	98	1	153	297	54	216	7.00e-12	64.7
MsG0580025575.01.T01	AT1G10610	43.243	74	40	1	153	226	263	334	8.27e-12	66.2
MsG0580025575.01.T01	AT5G57150	29.139	151	89	1	153	285	53	203	1.39e-11	63.9
MsG0580025575.01.T01	AT2G22760	28.859	149	90	4	155	289	120	266	1.63e-11	64.3
MsG0580025575.01.T01	AT4G16430	36.905	84	50	1	155	235	321	404	1.80e-11	65.5
MsG0580025575.01.T01	AT5G57150	29.139	151	89	1	153	285	54	204	1.86e-11	63.2
MsG0580025575.01.T01	AT5G57150	29.139	151	89	1	153	285	53	203	2.57e-11	63.5
MsG0580025575.01.T01	AT5G57150	29.139	151	89	1	153	285	54	204	3.48e-11	63.2
MsG0580025575.01.T01	AT1G32640	43.662	71	38	1	141	209	437	507	5.35e-11	63.9

Find 63 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAATCACCTTGCTGATCTT+AGG	0.222682	5:+20743765	None:intergenic
AGGCTGTCCTTCAACCCTTT+TGG	0.223211	5:+20743863	None:intergenic
ACTCCTTAGAAATTTCTAAA+AGG	0.276635	5:+20743302	None:intergenic
CATAGATTTGAATGTCCTTA+TGG	0.286074	5:-20744107	MsG0580025575.01.T01:CDS
TTTACCACAACAAGAAAGTA+TGG	0.308343	5:-20744015	MsG0580025575.01.T01:CDS
TCATCATACCCTTATCTTGA+TGG	0.320494	5:-20744074	MsG0580025575.01.T01:CDS
CTTTCTTGTTGTGGTAAAAC+TGG	0.323789	5:+20744020	None:intergenic
TTTCTTACCATTACTTCATT+TGG	0.330225	5:+20743274	None:intergenic
CTATCAATCCGAACATGCTT+AGG	0.333337	5:+20742969	None:intergenic
CAAGAAAGTATGGAAGAGTT+TGG	0.335442	5:-20744005	MsG0580025575.01.T01:CDS
GAGTCAAAGGTCCAACCATT+AGG	0.336189	5:+20744200	None:intergenic
ATGGAAGAGTTTGGATTTGT+TGG	0.361028	5:-20743996	MsG0580025575.01.T01:CDS
CATTCAAATCTATGGTCTAA+TGG	0.372381	5:+20744116	None:intergenic
TAGTAAGTTACAAGAAGAAA+TGG	0.377782	5:-20743350	MsG0580025575.01.T01:CDS
ATTGTTAAGACTTATCTGTT+TGG	0.378758	5:-20744370	MsG0580025575.01.T01:five_prime_UTR
CAGTAACAATCCTGGCTTTG+TGG	0.397442	5:+20743099	None:intergenic
GAATCACCTTGCTGATCTTA+GGG	0.398992	5:+20743766	None:intergenic
AATGAGTTACTACTCCCTAA+TGG	0.409168	5:-20744215	MsG0580025575.01.T01:CDS
CATAAGGACATTCAAATCTA+TGG	0.410090	5:+20744108	None:intergenic
ACAGCCTTCAAAGAATCTTA+TGG	0.411193	5:-20743847	MsG0580025575.01.T01:CDS
ATGGACAGGACATCAATTCT+AGG	0.415879	5:-20743412	MsG0580025575.01.T01:CDS
ATCTGCTGTGCCACAAAGCC+AGG	0.421676	5:-20743109	MsG0580025575.01.T01:CDS
GCAAATGAAGGGTTTAAAGA+TGG	0.426120	5:+20744152	None:intergenic
GAAGAAAGCGTTTGAATGAC+AGG	0.437266	5:-20743812	MsG0580025575.01.T01:CDS
TCAGCCATAAGATTCTTTGA+AGG	0.448137	5:+20743843	None:intergenic
AGTAAAACCCTAAGCATGTT+CGG	0.453284	5:-20742977	MsG0580025575.01.T01:CDS
AGTCAAAGGTCCAACCATTA+GGG	0.456761	5:+20744201	None:intergenic
AAAATGGAACTTTCTCAACT+TGG	0.469304	5:-20744299	MsG0580025575.01.T01:CDS
TATTCATAGTTCACAAAAGT+GGG	0.479190	5:-20744334	MsG0580025575.01.T01:five_prime_UTR
ATGACAGGCTTTCCATGCTT+AGG	0.479470	5:-20743797	MsG0580025575.01.T01:CDS
GCCAAATCCAAAAGGGTTGA+AGG	0.482278	5:-20743870	MsG0580025575.01.T01:CDS
TATCAATCCGAACATGCTTA+GGG	0.484122	5:+20742970	None:intergenic
ACTGAGAATCCATCAAGATA+AGG	0.498561	5:+20744065	None:intergenic
CTGAGAATCCATCAAGATAA+GGG	0.499837	5:+20744066	None:intergenic
TAAGTTACAAGAAGAAATGG+AGG	0.505778	5:-20743347	MsG0580025575.01.T01:CDS
ACATGAAAGAGCTTCTAGAA+AGG	0.506584	5:-20743375	MsG0580025575.01.T01:CDS
AGATACTGATTCTTGTGTCC+TGG	0.512516	5:+20743128	None:intergenic
TCTTCCATACTTTCTTGTTG+TGG	0.521400	5:+20744011	None:intergenic
ACATGGAATACTTTATCCAC+TGG	0.522465	5:-20744242	MsG0580025575.01.T01:CDS
TGATGTTGAGAGGAGAGACC+AGG	0.532244	5:-20743146	MsG0580025575.01.T01:CDS
GATGATGCATCAGTTCCATA+AGG	0.540398	5:+20744092	None:intergenic
GTTAAAGCCAAATGAAGTAA+TGG	0.545862	5:-20743281	MsG0580025575.01.T01:CDS
AGAATCTTATGGCTGAAAGA+AGG	0.549094	5:-20743836	MsG0580025575.01.T01:CDS
TTGTTGGAAGTGAGAACAAG+AGG	0.555475	5:-20743980	MsG0580025575.01.T01:CDS
AGTTACTACTCCCTAATGGT+TGG	0.559379	5:-20744211	MsG0580025575.01.T01:CDS
TTATTCATAGTTCACAAAAG+TGG	0.563281	5:-20744335	MsG0580025575.01.T01:five_prime_UTR
CAAGAAGAAATGGAGGAAGA+AGG	0.564987	5:-20743340	MsG0580025575.01.T01:CDS
GTGAACACATTAGAAGCATT+AGG	0.568569	5:-20743070	MsG0580025575.01.T01:CDS
ACTGTTGACAGTAACAATCC+TGG	0.569200	5:+20743091	None:intergenic
GTTGAGAATGAAGCAAATGA+AGG	0.578645	5:+20744140	None:intergenic
TAAAATCAGCTGCAAAGTTG+AGG	0.582223	5:-20743946	MsG0580025575.01.T01:CDS
TAACACACTGGTGAATCTCA+AGG	0.606173	5:+20743047	None:intergenic
TTGAGAATGAAGCAAATGAA+GGG	0.614806	5:+20744141	None:intergenic
AATGGTAAGAAATTCCCCTA+AGG	0.619045	5:-20743263	MsG0580025575.01.T01:intron
TGAAACTGCTTATAACACAC+TGG	0.622427	5:+20743035	None:intergenic
GGTGCTGAATCATCAAACTC+AGG	0.624297	5:+20744041	None:intergenic
AGGGACAATTGACCTAAGCA+TGG	0.627542	5:+20743785	None:intergenic
TAGTAACTCATTCAAACCAG+TGG	0.629735	5:+20744226	None:intergenic
GGAAATAAACCATACCTTAG+GGG	0.645486	5:+20743249	None:intergenic
AAACAGATAAGTCTTAACAA+TGG	0.653905	5:+20744372	None:intergenic
TAGCTCCAAGAAAAGACACA+TGG	0.656108	5:-20744259	MsG0580025575.01.T01:CDS
ATTGCAAGCATCTTGCTCAG+AGG	0.660283	5:-20743002	MsG0580025575.01.T01:CDS
AATTGTCCCTAAGATCAGCA+AGG	0.709185	5:-20743772	MsG0580025575.01.T01:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTACATTTATTCATAAACT+TGG	+	Chr5:20744080-20744099	None:intergenic	15.0%
!!	TTATGAATAAATGTAATGAA+TGG	-	Chr5:20744083-20744102	MsG0580025575.01.T01:CDS	15.0%
!!!	AAAATGTAAATTTTGTAAGA+TGG	-	Chr5:20743846-20743865	MsG0580025575.01.T01:CDS	15.0%
!!	CTGAACATAAATACATATAT+CGG	+	Chr5:20743635-20743654	None:intergenic	20.0%
!!!	AAACCTTTTAGAAATTTCTA+AGG	-	Chr5:20743972-20743991	MsG0580025575.01.T01:CDS	20.0%
!!!	CGTAGTTTTTAATAAAATGA+CGG	+	Chr5:20744361-20744380	None:intergenic	20.0%
!	AAACAGATAAGTCTTAACAA+TGG	+	Chr5:20742908-20742927	None:intergenic	25.0%
!	ACTCCTTAGAAATTTCTAAA+AGG	+	Chr5:20743978-20743997	None:intergenic	25.0%
!	ATTGTTAAGACTTATCTGTT+TGG	-	Chr5:20742907-20742926	MsG0580025575.01.T01:CDS	25.0%
!	TAGTAAGTTACAAGAAGAAA+TGG	-	Chr5:20743927-20743946	MsG0580025575.01.T01:CDS	25.0%
!	TATTCATAGTTCACAAAAGT+GGG	-	Chr5:20742943-20742962	MsG0580025575.01.T01:CDS	25.0%
!	TTATTCATAGTTCACAAAAG+TGG	-	Chr5:20742942-20742961	MsG0580025575.01.T01:CDS	25.0%
!	TTTCTTACCATTACTTCATT+TGG	+	Chr5:20744006-20744025	None:intergenic	25.0%
!!	ATTTTCATCAAATGAGTCAA+AGG	+	Chr5:20743093-20743112	None:intergenic	25.0%
	AAAATGGAACTTTCTCAACT+TGG	-	Chr5:20742978-20742997	MsG0580025575.01.T01:CDS	30.0%
	AAGGAAATAAACCATACCTT+AGG	+	Chr5:20744033-20744052	None:intergenic	30.0%
	AGAAAAAAGCCAAATCCAAA+AGG	-	Chr5:20743399-20743418	MsG0580025575.01.T01:CDS	30.0%
	AGGAAATAAACCATACCTTA+GGG	+	Chr5:20744032-20744051	None:intergenic	30.0%
	CATAAGGACATTCAAATCTA+TGG	+	Chr5:20743172-20743191	None:intergenic	30.0%
	CATAGATTTGAATGTCCTTA+TGG	-	Chr5:20743170-20743189	MsG0580025575.01.T01:intron	30.0%
	CATTCAAATCTATGGTCTAA+TGG	+	Chr5:20743164-20743183	None:intergenic	30.0%
	GAAAAAAGCCAAATCCAAAA+GGG	-	Chr5:20743400-20743419	MsG0580025575.01.T01:CDS	30.0%
	GATTATGCATTAGTTGTTCA+AGG	+	Chr5:20744052-20744071	None:intergenic	30.0%
	GTTAAAGCCAAATGAAGTAA+TGG	-	Chr5:20743996-20744015	MsG0580025575.01.T01:CDS	30.0%
	TAAGTTACAAGAAGAAATGG+AGG	-	Chr5:20743930-20743949	MsG0580025575.01.T01:CDS	30.0%
	TGGGAAAAGAGAAAGAAAAA+TGG	-	Chr5:20742962-20742981	MsG0580025575.01.T01:CDS	30.0%
	TTGAGAATGAAGCAAATGAA+GGG	+	Chr5:20743139-20743158	None:intergenic	30.0%
	TTTACCACAACAAGAAAGTA+TGG	-	Chr5:20743262-20743281	MsG0580025575.01.T01:intron	30.0%
!	CATAGTGTGTGTTCTAATTT+TGG	-	Chr5:20743724-20743743	MsG0580025575.01.T01:intron	30.0%
!	GAAACTCCAGTTTTTAACAT+GGG	-	Chr5:20743365-20743384	MsG0580025575.01.T01:CDS	30.0%
!	GTAAATTTTGTAAGATGGAC+AGG	-	Chr5:20743851-20743870	MsG0580025575.01.T01:CDS	30.0%
!	TGAAACTCCAGTTTTTAACA+TGG	-	Chr5:20743364-20743383	MsG0580025575.01.T01:CDS	30.0%
!!	TTTTTCAGTTTGATGTTGAG+AGG	-	Chr5:20744121-20744140	MsG0580025575.01.T01:CDS	30.0%
	AATGAGTTACTACTCCCTAA+TGG	-	Chr5:20743062-20743081	MsG0580025575.01.T01:CDS	35.0%
	AATGGTAAGAAATTCCCCTA+AGG	-	Chr5:20744014-20744033	MsG0580025575.01.T01:CDS	35.0%
	ACAGCCTTCAAAGAATCTTA+TGG	-	Chr5:20743430-20743449	MsG0580025575.01.T01:intron	35.0%
	ACATGGAATACTTTATCCAC+TGG	-	Chr5:20743035-20743054	MsG0580025575.01.T01:CDS	35.0%
	ACTGAGAATCCATCAAGATA+AGG	+	Chr5:20743215-20743234	None:intergenic	35.0%
	AGAATCTTATGGCTGAAAGA+AGG	-	Chr5:20743441-20743460	MsG0580025575.01.T01:intron	35.0%
	AGTAAAACCCTAAGCATGTT+CGG	-	Chr5:20744300-20744319	MsG0580025575.01.T01:exon	35.0%
	ATGGAAGAGTTTGGATTTGT+TGG	-	Chr5:20743281-20743300	MsG0580025575.01.T01:CDS	35.0%
	CACAAACCCATGTTAAAAAC+TGG	+	Chr5:20743374-20743393	None:intergenic	35.0%
	CTGAGAATCCATCAAGATAA+GGG	+	Chr5:20743214-20743233	None:intergenic	35.0%
	GCAAATGAAGGGTTTAAAGA+TGG	+	Chr5:20743128-20743147	None:intergenic	35.0%
	GGAAATAAACCATACCTTAG+GGG	+	Chr5:20744031-20744050	None:intergenic	35.0%
	GTTGAGAATGAAGCAAATGA+AGG	+	Chr5:20743140-20743159	None:intergenic	35.0%
	TAAAATCAGCTGCAAAGTTG+AGG	-	Chr5:20743331-20743350	MsG0580025575.01.T01:CDS	35.0%
	TAAGAAATTCCCCTAAGGTA+TGG	-	Chr5:20744019-20744038	MsG0580025575.01.T01:CDS	35.0%
	TAGTAACTCATTCAAACCAG+TGG	+	Chr5:20743054-20743073	None:intergenic	35.0%
	TATCAATCCGAACATGCTTA+GGG	+	Chr5:20744310-20744329	None:intergenic	35.0%
	TCAGCCATAAGATTCTTTGA+AGG	+	Chr5:20743437-20743456	None:intergenic	35.0%
	TCATCATACCCTTATCTTGA+TGG	-	Chr5:20743203-20743222	MsG0580025575.01.T01:intron	35.0%
	TCTTCCATACTTTCTTGTTG+TGG	+	Chr5:20743269-20743288	None:intergenic	35.0%
	TGAAACTGCTTATAACACAC+TGG	+	Chr5:20744245-20744264	None:intergenic	35.0%
!	AACTACGCTTTTGAGCTTTA+AGG	-	Chr5:20744374-20744393	MsG0580025575.01.T01:five_prime_UTR	35.0%
!	ACATGAAAGAGCTTCTAGAA+AGG	-	Chr5:20743902-20743921	MsG0580025575.01.T01:CDS	35.0%
!	CAAGAAAGTATGGAAGAGTT+TGG	-	Chr5:20743272-20743291	MsG0580025575.01.T01:CDS	35.0%
!	CATTGACTAGCACTTGTATT+TGG	-	Chr5:20743786-20743805	MsG0580025575.01.T01:CDS	35.0%
!	CTTTCTTGTTGTGGTAAAAC+TGG	+	Chr5:20743260-20743279	None:intergenic	35.0%
!	GTATTCCATGTGTCTTTTCT+TGG	+	Chr5:20743026-20743045	None:intergenic	35.0%
!	GTTTTTAACATGGGTTTGTG+TGG	-	Chr5:20743374-20743393	MsG0580025575.01.T01:CDS	35.0%
!!	ACTACGCTTTTGAGCTTTAA+GGG	-	Chr5:20744375-20744394	MsG0580025575.01.T01:five_prime_UTR	35.0%
!!	GTGAACACATTAGAAGCATT+AGG	-	Chr5:20744207-20744226	MsG0580025575.01.T01:CDS	35.0%
!!	TTCTCAACTTGGTTTTCTTG+AGG	-	Chr5:20742989-20743008	MsG0580025575.01.T01:CDS	35.0%
	AATTGTCCCTAAGATCAGCA+AGG	-	Chr5:20743505-20743524	MsG0580025575.01.T01:intron	40.0%
	ACTGTTGACAGTAACAATCC+TGG	+	Chr5:20744189-20744208	None:intergenic	40.0%
	AGTCAAAGGTCCAACCATTA+GGG	+	Chr5:20743079-20743098	None:intergenic	40.0%
	AGTTACTACTCCCTAATGGT+TGG	-	Chr5:20743066-20743085	MsG0580025575.01.T01:CDS	40.0%
	ATGGACAGGACATCAATTCT+AGG	-	Chr5:20743865-20743884	MsG0580025575.01.T01:CDS	40.0%
	CAAGAAGAAATGGAGGAAGA+AGG	-	Chr5:20743937-20743956	MsG0580025575.01.T01:CDS	40.0%
	CTATCAATCCGAACATGCTT+AGG	+	Chr5:20744311-20744330	None:intergenic	40.0%
	GAATCACCTTGCTGATCTTA+GGG	+	Chr5:20743514-20743533	None:intergenic	40.0%
	GATGATGCATCAGTTCCATA+AGG	+	Chr5:20743188-20743207	None:intergenic	40.0%
	TAACACACTGGTGAATCTCA+AGG	+	Chr5:20744233-20744252	None:intergenic	40.0%
	TAGCTCCAAGAAAAGACACA+TGG	-	Chr5:20743018-20743037	MsG0580025575.01.T01:CDS	40.0%
	TGAATCACCTTGCTGATCTT+AGG	+	Chr5:20743515-20743534	None:intergenic	40.0%
	TTGTTGGAAGTGAGAACAAG+AGG	-	Chr5:20743297-20743316	MsG0580025575.01.T01:CDS	40.0%
!	TCCTTCAACCCTTTTGGATT+TGG	+	Chr5:20743411-20743430	None:intergenic	40.0%
!!	AGATACTGATTCTTGTGTCC+TGG	+	Chr5:20744152-20744171	None:intergenic	40.0%
!!	GAAGAAAGCGTTTGAATGAC+AGG	-	Chr5:20743465-20743484	MsG0580025575.01.T01:intron	40.0%
	AGGGACAATTGACCTAAGCA+TGG	+	Chr5:20743495-20743514	None:intergenic	45.0%
	ATGACAGGCTTTCCATGCTT+AGG	-	Chr5:20743480-20743499	MsG0580025575.01.T01:intron	45.0%
	ATTGCAAGCATCTTGCTCAG+AGG	-	Chr5:20744275-20744294	MsG0580025575.01.T01:CDS	45.0%
	GAGTCAAAGGTCCAACCATT+AGG	+	Chr5:20743080-20743099	None:intergenic	45.0%
	GCCAAATCCAAAAGGGTTGA+AGG	-	Chr5:20743407-20743426	MsG0580025575.01.T01:CDS	45.0%
	TCGAGTATCAGTGTTCTGTC+TGG	-	Chr5:20743685-20743704	MsG0580025575.01.T01:intron	45.0%
!	GGTGCTGAATCATCAAACTC+AGG	+	Chr5:20743239-20743258	None:intergenic	45.0%
!!	CAGTAACAATCCTGGCTTTG+TGG	+	Chr5:20744181-20744200	None:intergenic	45.0%
	TGATGTTGAGAGGAGAGACC+AGG	-	Chr5:20744131-20744150	MsG0580025575.01.T01:CDS	50.0%
!	AGGCTGTCCTTCAACCCTTT+TGG	+	Chr5:20743417-20743436	None:intergenic	50.0%
	ATCTGCTGTGCCACAAAGCC+AGG	-	Chr5:20744168-20744187	MsG0580025575.01.T01:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	20742892	20744407	20742892	ID=MsG0580025575.01;Name=MsG0580025575.01
Chr5	mRNA	20742892	20744407	20742892	ID=MsG0580025575.01.T01;Parent=MsG0580025575.01;Name=MsG0580025575.01.T01;_AED=0.28;_eAED=0.28;_QI=89\|1\|0.66\|1\|1\|1\|3\|0\|331
Chr5	exon	20742892	20743170	20742892	ID=MsG0580025575.01.T01:exon:23352;Parent=MsG0580025575.01.T01
Chr5	exon	20743264	20743434	20743264	ID=MsG0580025575.01.T01:exon:23351;Parent=MsG0580025575.01.T01
Chr5	exon	20743773	20744407	20743773	ID=MsG0580025575.01.T01:exon:23350;Parent=MsG0580025575.01.T01
Chr5	five_prime_UTR	20744319	20744407	20744319	ID=MsG0580025575.01.T01:five_prime_utr;Parent=MsG0580025575.01.T01
Chr5	CDS	20743773	20744318	20743773	ID=MsG0580025575.01.T01:cds;Parent=MsG0580025575.01.T01
Chr5	CDS	20743264	20743434	20743264	ID=MsG0580025575.01.T01:cds;Parent=MsG0580025575.01.T01
Chr5	CDS	20742892	20743170	20742892	ID=MsG0580025575.01.T01:cds;Parent=MsG0580025575.01.T01

Gene Sequence

>MsG0580025575.01.T01

ATGGAACTTTCTCAACTTGGTTTTCTTGAGGAGCTACTAGCTCCAAGAAAAGACACATGGAATACTTTATCCACTGGTTTGAATGAGTTACTACTCCCTAATGGTTGGACCTTTGACTCATTTGATGAAAATCTTCTCATCAATCCATCTTTAAACCCTTCATTTGCTTCATTCTCAACACCATTAGACCATAGATTTGAATGTCCTTATGGAACTGATGCATCATCATACCCTTATCTTGATGGATTCTCAGTTCCTGAGTTTGATGATTCAGCACCAGTTTTACCACAACAAGAAAGTATGGAAGAGTTTGGATTTGTTGGAAGTGAGAACAAGAGGTTTGAAGAGAGTAAAATCAGCTGCAAAGTTGAGGAACAAGTTAGTGAAACTCCAGTTTTTAACATGGGTTTGTGTGGTGAGAAAAAAGCCAAATCCAAAAGGGTTGAAGGACAGCCTTCAAAGAATCTTATGGCTGAAAGAAGGAGAAGAAAGCGTTTGAATGACAGGCTTTCCATGCTTAGGTCAATTGTCCCTAAGATCAGCAAGATGGACAGGACATCAATTCTAGGAGATACAATTGATTACATGAAAGAGCTTCTAGAAAGGATTAGTAAGTTACAAGAAGAAATGGAGGAAGAAGGAACAAATCAGATAAACCTTTTAGAAATTTCTAAGGAGTTAAAGCCAAATGAAGTAATGGTAAGAAATTCCCCTAAGTTTGATGTTGAGAGGAGAGACCAGGACACAAGAATCAGTATCTGCTGTGCCACAAAGCCAGGATTGTTACTGTCAACAGTGAACACATTAGAAGCATTAGGCCTTGAGATTCACCAGTGTGTTATAAGCAGTTTCAATGATTTTTCATTGCAAGCATCTTGCTCAGAGGTTAGTAAAACCCTAAGCATGTTCGGATTGATAGCGAATTTGTCAGAATTACATTGTGTCGCCGTCATTTTATTAAAAACTACGCTTTTGAGCTTTAAGGGTTATAATTGA

Protein sequence

>MsG0580025575.01.T01

MELSQLGFLEELLAPRKDTWNTLSTGLNELLLPNGWTFDSFDENLLINPSLNPSFASFSTPLDHRFECPYGTDASSYPYLDGFSVPEFDDSAPVLPQQESMEEFGFVGSENKRFEESKISCKVEEQVSETPVFNMGLCGEKKAKSKRVEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLERISKLQEEMEEEGTNQINLLEISKELKPNEVMVRNSPKFDVERRDQDTRISICCATKPGLLLSTVNTLEALGLEIHQCVISSFNDFSLQASCSEVSKTLSMFGLIANLSELHCVAVILLKTTLLSFKGYN*