AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010227.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010227.01.T01 MTR_2g079420 93.064 173 11 1 1 172 1 173 1.40e-115 325
MsG0280010227.01.T01 MTR_8g059015 65.385 182 47 6 1 172 1 176 2.98e-75 223
MsG0280010227.01.T01 MTR_3g089065 65.600 125 42 1 48 172 50 173 6.75e-61 186
MsG0280010227.01.T01 MTR_4g085880 53.125 96 45 0 77 172 73 168 3.50e-37 126
MsG0280010227.01.T01 MTR_2g079340 50.495 101 50 0 72 172 39 139 8.47e-34 117
MsG0280010227.01.T01 MTR_2g079400 48.039 102 53 0 69 170 34 135 7.09e-33 114
MsG0280010227.01.T01 MTR_2g079360 52.941 102 47 1 69 169 46 147 7.98e-32 112
MsG0280010227.01.T01 MTR_2g079380 53.571 84 39 0 69 152 18 101 1.85e-25 98.6
MsG0280010227.01.T01 MTR_1g114290 38.532 109 59 2 69 172 70 175 5.30e-23 90.5
MsG0280010227.01.T01 MTR_1g098660 33.981 103 68 0 67 169 60 162 4.39e-20 82.4
MsG0280010227.01.T01 MTR_5g021180 43.333 90 49 2 83 172 28 115 1.22e-16 72.4
MsG0280010227.01.T01 MTR_4g094690 42.500 80 43 2 81 158 77 155 7.68e-16 71.2
MsG0280010227.01.T01 MTR_7g009070 36.145 83 51 2 88 170 51 131 1.04e-15 70.1
MsG0280010227.01.T01 MTR_1g023140 42.254 71 40 1 88 158 31 100 1.64e-14 66.6
MsG0280010227.01.T01 MTR_8g107460 41.975 81 45 2 88 168 279 357 7.84e-14 68.6
MsG0280010227.01.T01 MTR_3g112410 40.845 71 41 1 88 158 31 100 8.52e-14 64.7
MsG0280010227.01.T01 MTR_5g084930 36.170 94 60 0 57 150 18 111 3.74e-13 66.6
MsG0280010227.01.T01 MTR_5g084930 32.990 97 63 1 60 156 151 245 1.03e-12 65.5
MsG0280010227.01.T01 MTR_2g021750 32.692 104 70 0 47 150 8 111 8.49e-11 59.7
MsG0280010227.01.T01 MTR_1g037680 30.000 90 61 1 83 170 95 184 9.23e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010227.01.T01 AT3G15360 60.510 157 58 2 20 172 35 191 1.56e-64 196
MsG0280010227.01.T01 AT1G03680 53.548 155 68 3 18 172 29 179 9.96e-56 174
MsG0280010227.01.T01 AT4G03520 52.229 157 67 4 20 172 33 185 3.49e-55 172
MsG0280010227.01.T01 AT2G15570 50.450 111 52 1 62 172 64 171 2.15e-37 127
MsG0280010227.01.T01 AT2G15570 49.550 111 54 1 62 172 64 172 3.27e-37 126
MsG0280010227.01.T01 AT4G03520 63.380 71 26 0 102 172 1 71 1.59e-29 103
MsG0280010227.01.T01 AT1G76760 36.792 106 67 0 67 172 63 168 3.98e-23 90.5
MsG0280010227.01.T01 AT1G43560 32.927 164 94 3 14 172 11 163 2.30e-22 88.6
MsG0280010227.01.T01 AT1G50320 33.577 137 76 2 38 172 53 176 3.60e-21 85.9
MsG0280010227.01.T01 AT1G19730 42.105 76 44 0 83 158 26 101 4.28e-18 75.9
MsG0280010227.01.T01 AT4G12170 40.860 93 55 0 69 161 51 143 2.57e-17 75.1
MsG0280010227.01.T01 AT3G51030 44.444 90 48 2 83 172 26 113 5.02e-17 73.2
MsG0280010227.01.T01 AT5G42980 39.773 88 51 2 83 170 25 110 1.02e-16 72.4
MsG0280010227.01.T01 AT2G35010 38.824 85 49 2 76 158 97 180 9.28e-15 68.9
MsG0280010227.01.T01 AT2G35010 38.824 85 49 2 76 158 97 180 9.28e-15 68.9
MsG0280010227.01.T01 AT5G39950 36.471 85 50 2 77 158 36 119 1.82e-14 67.0
MsG0280010227.01.T01 AT1G52990 40.741 81 47 1 82 161 223 303 5.69e-14 68.6
MsG0280010227.01.T01 AT1G45145 36.842 76 47 1 83 158 25 99 1.34e-13 64.3
MsG0280010227.01.T01 AT1G31020 35.065 77 47 2 83 157 69 144 3.32e-12 61.6
MsG0280010227.01.T01 AT2G32920 28.467 137 87 4 13 146 113 241 4.86e-12 63.5
MsG0280010227.01.T01 AT2G32920 36.585 82 52 0 69 150 32 113 6.08e-11 60.5
MsG0280010227.01.T01 AT1G04980 26.984 126 89 1 21 146 124 246 5.98e-12 63.2
MsG0280010227.01.T01 AT1G04980 36.585 82 52 0 69 150 34 115 3.90e-11 60.8
MsG0280010227.01.T01 AT3G06730 27.545 167 106 6 1 155 1 164 7.85e-12 61.2
MsG0280010227.01.T01 AT3G54960 33.010 103 68 1 68 170 100 201 8.80e-12 62.8
MsG0280010227.01.T01 AT3G54960 33.010 103 68 1 68 170 100 201 1.28e-11 62.4
MsG0280010227.01.T01 AT1G69880 33.803 71 46 1 88 158 62 131 4.97e-11 58.2
MsG0280010227.01.T01 AT1G59730 33.673 98 60 3 76 170 31 126 6.06e-11 57.4
MsG0280010227.01.T01 AT4G04950 28.750 80 56 1 83 162 19 97 9.29e-11 59.7

Find 72 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTGTGTTGGTCGAATTC+TGG 0.102485 2:+66403410 MsG0280010227.01.T01:CDS
CTTTCTTAAATAATCGTTTA+TGG 0.132258 2:+66403772 MsG0280010227.01.T01:three_prime_UTR
CGACGATTGGAGAGCGAATA+AGG 0.177500 2:-66400510 None:intergenic
CAAACTTGAGATAAGATAAT+TGG 0.228833 2:-66403740 None:intergenic
CTTTGCTAGCTCATCAACTA+TGG 0.233293 2:-66403467 None:intergenic
CTTCTATTACTGATGGAAAT+TGG 0.291432 2:+66403362 MsG0280010227.01.T01:CDS
GCTTTATGATATGTCGCTAA+TGG 0.299425 2:-66403718 None:intergenic
TCCTGTGTTGGTCGAATTCT+GGG 0.312332 2:+66403411 MsG0280010227.01.T01:CDS
TTTATGGTGTTGTATAGTTA+TGG 0.316211 2:+66403788 MsG0280010227.01.T01:three_prime_UTR
CAATTATCTTATCTCAAGTT+TGG 0.319499 2:+66403741 MsG0280010227.01.T01:three_prime_UTR
ATTTGTGGTCAATGTTGCTT+TGG 0.336888 2:-66403632 None:intergenic
CTTTATGATATGTCGCTAAT+GGG 0.369840 2:-66403717 None:intergenic
GAAAAGAAAGATACAGTTAT+TGG 0.371482 2:+66403601 MsG0280010227.01.T01:CDS
GACGATTGGAGAGCGAATAA+GGG 0.423584 2:-66400509 None:intergenic
CCTTCAGTTGCTACTCGGTA+TGG 0.423871 2:+66403538 MsG0280010227.01.T01:CDS
TTATGGTGTTGTATAGTTAT+GGG 0.430717 2:+66403789 MsG0280010227.01.T01:three_prime_UTR
TTTGTGGTCAATGTTGCTTT+GGG 0.452585 2:-66403631 None:intergenic
CGCAGACGAGTGGCGGAGAC+TGG 0.459267 2:-66400586 None:intergenic
AAAATGCCAGTGATGTCAAA+TGG 0.470133 2:-66403898 None:intergenic
CGCCGCTGGTCTCTCTCACT+CGG 0.477237 2:+66400401 MsG0280010227.01.T01:five_prime_UTR
GAGGAAACGCGGCAGTGCTC+CGG 0.477586 2:-66400540 None:intergenic
CTCCAATCGTCGCTTCTCGC+CGG 0.477652 2:+66400521 MsG0280010227.01.T01:CDS
TATGGGATGCTTCCATATTG+TGG 0.480198 2:+66403806 MsG0280010227.01.T01:three_prime_UTR
TTCTTTGTCTGCCATCTCAC+AGG 0.484524 2:-66403666 None:intergenic
CGTGATAACACAGCCGTTGA+AGG 0.489745 2:+66400664 MsG0280010227.01.T01:CDS
CTCCGGCGAGAAGCGACGAT+TGG 0.491040 2:-66400523 None:intergenic
CTTCAGTTGCTACTCGGTAT+GGG 0.494438 2:+66403539 MsG0280010227.01.T01:CDS
AGCTTGAGGCCGGTGTATTG+AGG 0.508457 2:-66400559 None:intergenic
GACTGGTCGGAGCTTGAGGC+CGG 0.510218 2:-66400569 None:intergenic
CAGACAAAGAAGGCTTCAGC+TGG 0.512145 2:+66403678 MsG0280010227.01.T01:three_prime_UTR
ATTGCAGAGAATCGTAGCTC+TGG 0.518630 2:-66400457 None:intergenic
GCAGTGGCTTCTATTACTGA+TGG 0.533416 2:+66403355 MsG0280010227.01.T01:intron
TTCTTGAAGAAAATGACAGT+TGG 0.533751 2:-66403574 None:intergenic
AACCGAACCCTAACCTTCAA+CGG 0.535342 2:-66400677 None:intergenic
GCTACGATTCTCTGCAATCA+TGG 0.535366 2:+66400462 MsG0280010227.01.T01:exon
TTTGCTAGCTCATCAACTAT+GGG 0.536511 2:-66403466 None:intergenic
GGAAGATAATATTGTTTCTG+TGG 0.542760 2:-66400341 None:intergenic
CGGAGACTGGTCGGAGCTTG+AGG 0.546843 2:-66400573 None:intergenic
TATGGGATGAATCATGCGGC+AGG 0.560107 2:-66403449 None:intergenic
TGGTCGAATTCTGGGCTCCA+TGG 0.560925 2:+66403419 MsG0280010227.01.T01:CDS
AGAATCTGAGATTCCTGTGT+TGG 0.562341 2:+66403399 MsG0280010227.01.T01:CDS
TCGAATGTTGTTCGTCGCGG+TGG 0.566799 2:+66400622 MsG0280010227.01.T01:CDS
ACCGCGACGAACAACATTCG+AGG 0.568696 2:-66400620 None:intergenic
TGTGAGATGGCAGACAAAGA+AGG 0.570704 2:+66403668 MsG0280010227.01.T01:exon
CGGTGGAACCGTCGTGTGTG+AGG 0.573215 2:+66400639 MsG0280010227.01.T01:CDS
GGAGAAGGATTCGAGTTGTA+CGG 0.579686 2:-66400488 None:intergenic
GAATTCTGGGCTCCATGGTG+TGG 0.587228 2:+66403424 MsG0280010227.01.T01:CDS
AATCTCAGATTCTATGACAA+GGG 0.589830 2:-66403389 None:intergenic
GACGAGTGGCGGAGACTGGT+CGG 0.590163 2:-66400582 None:intergenic
GCCCAGAATTCGACCAACAC+AGG 0.591293 2:-66403412 None:intergenic
ATGCGGCAGGGACCACACCA+TGG 0.592003 2:-66403436 None:intergenic
CGACGAACAACATTCGAGGC+GGG 0.593567 2:-66400616 None:intergenic
CAGTCTCCGCCACTCGTCTG+CGG 0.594319 2:+66400587 MsG0280010227.01.T01:CDS
TGGAGAGCGAATAAGGGAGA+AGG 0.600317 2:-66400503 None:intergenic
TTGACTCCGCAGACGAGTGG+CGG 0.600852 2:-66400593 None:intergenic
GAGCTAGCAAAGGAATATGC+GGG 0.603263 2:+66403478 MsG0280010227.01.T01:CDS
AAAGTCCTTCAGTTGCTACT+CGG 0.607500 2:+66403533 MsG0280010227.01.T01:CDS
GGGTTGACTCCGCAGACGAG+TGG 0.610441 2:-66400596 None:intergenic
CATAGTTGATGAGCTAGCAA+AGG 0.630561 2:+66403468 MsG0280010227.01.T01:CDS
GCCTCGAATGTTGTTCGTCG+CGG 0.633957 2:+66400619 MsG0280010227.01.T01:CDS
TTCAACTTGATAAAATAGAG+CGG 0.635619 2:-66403873 None:intergenic
CCATACCGAGTAGCAACTGA+AGG 0.641503 2:-66403538 None:intergenic
ATGGGATGAATCATGCGGCA+GGG 0.655515 2:-66403448 None:intergenic
TGAGCTAGCAAAGGAATATG+CGG 0.658244 2:+66403477 MsG0280010227.01.T01:CDS
CAACTATGGGATGAATCATG+CGG 0.659788 2:-66403453 None:intergenic
GAATCTCAGATTCTATGACA+AGG 0.685810 2:-66403390 None:intergenic
ATCACGAGCCTCACACACGA+CGG 0.693040 2:-66400647 None:intergenic
GCCGGTGTATTGAGGAAACG+CGG 0.696706 2:-66400551 None:intergenic
GCCGCGTTTCCTCAATACAC+CGG 0.698489 2:+66400550 MsG0280010227.01.T01:CDS
GCGACGAACAACATTCGAGG+CGG 0.707036 2:-66400617 None:intergenic
GAAGGATTCGAGTTGTACGG+TGG 0.711676 2:-66400485 None:intergenic
GACCGAGTGAGAGAGACCAG+CGG 0.726317 2:-66400403 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTGAAAAACATAAA+TGG - Chr2:66403174-66403193 None:intergenic 10.0%
!! ATATATATATATATATCACG+TGG + Chr2:66401489-66401508 MsG0280010227.01.T01:intron 15.0%
!!! TAGTTAAACTTATGTTTTAT+TGG + Chr2:66403327-66403346 MsG0280010227.01.T01:intron 15.0%
!! AAAAGAATGATACACTAAAA+GGG - Chr2:66400940-66400959 None:intergenic 20.0%
!! AACCTAACATTATGAATATT+AGG - Chr2:66401776-66401795 None:intergenic 20.0%
!! ACAAATACAAAGTAAGATAT+TGG - Chr2:66402845-66402864 None:intergenic 20.0%
!! ATAAAAATAAATCAGAGTTC+TGG - Chr2:66402936-66402955 None:intergenic 20.0%
!! CTAAAAATATATGTTCAAGT+TGG - Chr2:66402994-66403013 None:intergenic 20.0%
!! CTTTCTTAAATAATCGTTTA+TGG + Chr2:66403772-66403791 MsG0280010227.01.T01:three_prime_UTR 20.0%
!! TAAAAGAATGATACACTAAA+AGG - Chr2:66400941-66400960 None:intergenic 20.0%
!! TTATCTAAAAAACCACAATA+TGG - Chr2:66403821-66403840 None:intergenic 20.0%
!!! AAAAATTTAAGGCAACATAT+TGG - Chr2:66403853-66403872 None:intergenic 20.0%
!!! ATAAATATTTATTTGGAACG+TGG - Chr2:66401691-66401710 None:intergenic 20.0%
!!! TAGTATCTGTTGTTTTTATT+TGG - Chr2:66400365-66400384 None:intergenic 20.0%
!!! TTATTGAAATTAAGCCATTT+TGG + Chr2:66401707-66401726 MsG0280010227.01.T01:intron 20.0%
!!! TTTGAAACTATTAACTAGTT+AGG - Chr2:66401664-66401683 None:intergenic 20.0%
! AAATAGAGCGGAAAAATTTA+AGG - Chr2:66403864-66403883 None:intergenic 25.0%
! AGAACTTCCTTTAATAAAGA+TGG + Chr2:66402307-66402326 MsG0280010227.01.T01:intron 25.0%
! AGCTACTACCTTATTAATTT+AGG + Chr2:66402478-66402497 MsG0280010227.01.T01:intron 25.0%
! CAAACTTGAGATAAGATAAT+TGG - Chr2:66403743-66403762 None:intergenic 25.0%
! CAATTATCTTATCTCAAGTT+TGG + Chr2:66403741-66403760 MsG0280010227.01.T01:three_prime_UTR 25.0%
! CATATATGTCAGTTATTCAA+GGG - Chr2:66402156-66402175 None:intergenic 25.0%
! GAAAAGAAAGATACAGTTAT+TGG + Chr2:66403601-66403620 MsG0280010227.01.T01:CDS 25.0%
! GTACTAATACTAGTATTTGT+TGG + Chr2:66402765-66402784 MsG0280010227.01.T01:intron 25.0%
! TAACACCATAATTACTTCTA+GGG - Chr2:66402640-66402659 None:intergenic 25.0%
! TAACTAGTTAGGAATGTATT+TGG - Chr2:66401653-66401672 None:intergenic 25.0%
! TCATATATGTCAGTTATTCA+AGG - Chr2:66402157-66402176 None:intergenic 25.0%
! TTCAACTTGATAAAATAGAG+CGG - Chr2:66403876-66403895 None:intergenic 25.0%
! TTTCAATAAGCATGCTAAAA+TGG + Chr2:66402873-66402892 MsG0280010227.01.T01:intron 25.0%
!! CAGGAATTTTTCTATATTTG+TGG - Chr2:66403650-66403669 None:intergenic 25.0%
!! TTTTTGATGCATTTATCATC+TGG + Chr2:66403189-66403208 MsG0280010227.01.T01:intron 25.0%
!!! TATTAGATTTTGAAGCATTC+AGG + Chr2:66402725-66402744 MsG0280010227.01.T01:intron 25.0%
!!! TTATGGTGTTGTATAGTTAT+GGG + Chr2:66403789-66403808 MsG0280010227.01.T01:three_prime_UTR 25.0%
!!! TTTATGGTGTTGTATAGTTA+TGG + Chr2:66403788-66403807 MsG0280010227.01.T01:three_prime_UTR 25.0%
AAAAACTGCATAACATGCTT+AGG - Chr2:66401915-66401934 None:intergenic 30.0%
AAAATAACAGACCCATTAAG+TGG - Chr2:66401952-66401971 None:intergenic 30.0%
AACATTGACATTAACTGACA+GGG + Chr2:66401006-66401025 MsG0280010227.01.T01:intron 30.0%
AATCTCAGATTCTATGACAA+GGG - Chr2:66403392-66403411 None:intergenic 30.0%
ACTCTAATAGTTATGGACAA+AGG + Chr2:66401983-66402002 MsG0280010227.01.T01:intron 30.0%
ATAGAAAAATTCCTGTGAGA+TGG + Chr2:66403655-66403674 MsG0280010227.01.T01:exon 30.0%
ATTGAACATCATCACACATA+AGG + Chr2:66401829-66401848 MsG0280010227.01.T01:intron 30.0%
ATTTCATGTGTTTCGGATTA+TGG - Chr2:66401065-66401084 None:intergenic 30.0%
CAAAGTAAGATATTGGTCAA+AGG - Chr2:66402838-66402857 None:intergenic 30.0%
CATTTCCCTAGAAGTAATTA+TGG + Chr2:66402632-66402651 MsG0280010227.01.T01:intron 30.0%
CTAACACCATAATTACTTCT+AGG - Chr2:66402641-66402660 None:intergenic 30.0%
CTGAAATTTAGTGTACGTAT+TGG + Chr2:66400877-66400896 MsG0280010227.01.T01:intron 30.0%
CTGTTTATGAGTATTAGTGT+TGG + Chr2:66402363-66402382 MsG0280010227.01.T01:intron 30.0%
CTTCAATTGTAGACATTGAA+AGG + Chr2:66401230-66401249 MsG0280010227.01.T01:intron 30.0%
CTTCTATTACTGATGGAAAT+TGG + Chr2:66403362-66403381 MsG0280010227.01.T01:CDS 30.0%
CTTTATGATATGTCGCTAAT+GGG - Chr2:66403720-66403739 None:intergenic 30.0%
GGCCTAATATTCATAATGTT+AGG + Chr2:66401771-66401790 MsG0280010227.01.T01:intron 30.0%
GTTGCTTACTCTAATAGTTA+TGG + Chr2:66401976-66401995 MsG0280010227.01.T01:intron 30.0%
TATAACTCATCTAATCAACG+AGG - Chr2:66402215-66402234 None:intergenic 30.0%
TGCGTATATTTCATGTGTTT+CGG - Chr2:66401072-66401091 None:intergenic 30.0%
TGGGTAAAAAATTAGCATGT+GGG - Chr2:66401560-66401579 None:intergenic 30.0%
TTAGATCTGTTGAAAGTGAT+TGG + Chr2:66400737-66400756 MsG0280010227.01.T01:intron 30.0%
TTCTTGAAGAAAATGACAGT+TGG - Chr2:66403577-66403596 None:intergenic 30.0%
TTGTGTTGAGTCTAATTACA+TGG + Chr2:66402255-66402274 MsG0280010227.01.T01:intron 30.0%
TTTCATGTGTTTCGGATTAT+GGG - Chr2:66401064-66401083 None:intergenic 30.0%
! TAAGCATGTTATGCAGTTTT+TGG + Chr2:66401914-66401933 MsG0280010227.01.T01:intron 30.0%
! TGCTAAAATGGTATAGCTTT+TGG + Chr2:66402885-66402904 MsG0280010227.01.T01:intron 30.0%
! TTCACTAAATGCCACTTAAT+GGG + Chr2:66401938-66401957 MsG0280010227.01.T01:intron 30.0%
! TTTCACTAAATGCCACTTAA+TGG + Chr2:66401937-66401956 MsG0280010227.01.T01:intron 30.0%
!! ACTAGTATTTGTTGGTAACT+TGG + Chr2:66402773-66402792 MsG0280010227.01.T01:intron 30.0%
!! GGAAGATAATATTGTTTCTG+TGG - Chr2:66400344-66400363 None:intergenic 30.0%
!! TGTTTTATTGGATATTGCAG+TGG + Chr2:66403339-66403358 MsG0280010227.01.T01:intron 30.0%
!!! ACTGTCATTTTCTTCAAGAA+CGG + Chr2:66403577-66403596 MsG0280010227.01.T01:CDS 30.0%
!!! CTTTTAAAACTCTAGCAACT+GGG - Chr2:66400857-66400876 None:intergenic 30.0%
!!! TTTTAAAACTCTAGCAACTG+GGG - Chr2:66400856-66400875 None:intergenic 30.0%
AAAGCCCCAAACCAAATATT+GGG - Chr2:66401804-66401823 None:intergenic 35.0%
AAGGTGAAGTTGTTAACCAT+GGG + Chr2:66401848-66401867 MsG0280010227.01.T01:intron 35.0%
ACATTGACATTAACTGACAG+GGG + Chr2:66401007-66401026 MsG0280010227.01.T01:intron 35.0%
AGGAGGGAAATAGAAAGAAA+GGG - Chr2:66401173-66401192 None:intergenic 35.0%
AGGATAAATTGAATGTCGAG+CGG + Chr2:66402401-66402420 MsG0280010227.01.T01:intron 35.0%
ATTCTTACTCACAGTCACAT+AGG - Chr2:66400773-66400792 None:intergenic 35.0%
CAACATTGACATTAACTGAC+AGG + Chr2:66401005-66401024 MsG0280010227.01.T01:intron 35.0%
CACGAAGGCCTAAATTAATA+AGG - Chr2:66402489-66402508 None:intergenic 35.0%
CCAATTCACATGCTCTTTAA+TGG + Chr2:66402119-66402138 MsG0280010227.01.T01:intron 35.0%
CCATGGGCAAATAGAAAAAA+TGG + Chr2:66401864-66401883 MsG0280010227.01.T01:intron 35.0%
CCTTCGTGTTATAGAAGTAA+GGG + Chr2:66402501-66402520 MsG0280010227.01.T01:intron 35.0%
GAATCTCAGATTCTATGACA+AGG - Chr2:66403393-66403412 None:intergenic 35.0%
GAGGTCACAGATTCAAATAT+TGG + Chr2:66403064-66403083 MsG0280010227.01.T01:intron 35.0%
GATTAGATGAGTTATACGAC+AGG + Chr2:66402219-66402238 MsG0280010227.01.T01:intron 35.0%
GCAAACAAACATTCAGAATG+AGG + Chr2:66400973-66400992 MsG0280010227.01.T01:intron 35.0%
GCTTTATGATATGTCGCTAA+TGG - Chr2:66403721-66403740 None:intergenic 35.0%
GTGGGTAAAAAATTAGCATG+TGG - Chr2:66401561-66401580 None:intergenic 35.0%
GTTGGAACTCTTGGAATTAA+AGG + Chr2:66402381-66402400 MsG0280010227.01.T01:intron 35.0%
TAAAGCCCCAAACCAAATAT+TGG - Chr2:66401805-66401824 None:intergenic 35.0%
TAAGGTGAAGTTGTTAACCA+TGG + Chr2:66401847-66401866 MsG0280010227.01.T01:intron 35.0%
TAGGAGGGAAATAGAAAGAA+AGG - Chr2:66401174-66401193 None:intergenic 35.0%
TATTTGAATCTGTGACCTCA+AGG - Chr2:66403063-66403082 None:intergenic 35.0%
TCATGCTAAGATACTACAGA+AGG - Chr2:66402086-66402105 None:intergenic 35.0%
TTGAAAGGCCTCTCAATTAT+AGG + Chr2:66401245-66401264 MsG0280010227.01.T01:intron 35.0%
TTTCTTTCTATTTCCCTCCT+AGG + Chr2:66401173-66401192 MsG0280010227.01.T01:intron 35.0%
TTTGCTAGCTCATCAACTAT+GGG - Chr2:66403469-66403488 None:intergenic 35.0%
! AAATGATAACTTGTGCCCTT+GGG - Chr2:66402617-66402636 None:intergenic 35.0%
! AGTATTAGTGTTGGAACTCT+TGG + Chr2:66402372-66402391 MsG0280010227.01.T01:intron 35.0%
! ATTTGTGGTCAATGTTGCTT+TGG - Chr2:66403635-66403654 None:intergenic 35.0%
! CCATTAAAGAGCATGTGAAT+TGG - Chr2:66402122-66402141 None:intergenic 35.0%
! TAGGTGACTTGCAAAACTAA+CGG - Chr2:66400823-66400842 None:intergenic 35.0%
! TTTAAAACTCTAGCAACTGG+GGG - Chr2:66400855-66400874 None:intergenic 35.0%
!! AGTTCTGGTTCTTGTTTCTT+CGG - Chr2:66402921-66402940 None:intergenic 35.0%
!! CACTGATTCTCTCAATCAAT+GGG - Chr2:66402340-66402359 None:intergenic 35.0%
!! TCACTGATTCTCTCAATCAA+TGG - Chr2:66402341-66402360 None:intergenic 35.0%
!! TTTCTTAACTTGTGCCCTAA+GGG - Chr2:66402542-66402561 None:intergenic 35.0%
!! TTTGTGGTCAATGTTGCTTT+GGG - Chr2:66403634-66403653 None:intergenic 35.0%
!!! ATGCTAATTTTTTACCCACG+TGG + Chr2:66401562-66401581 MsG0280010227.01.T01:intron 35.0%
!!! CCATTTTTTCTATTTGCCCA+TGG - Chr2:66401867-66401886 None:intergenic 35.0%
!!! GCTTTTAAAACTCTAGCAAC+TGG - Chr2:66400858-66400877 None:intergenic 35.0%
AAACAAAAACATTTCGCCGC+TGG + Chr2:66400387-66400406 MsG0280010227.01.T01:five_prime_UTR 40.0%
AAAGTCCTTCAGTTGCTACT+CGG + Chr2:66403533-66403552 MsG0280010227.01.T01:CDS 40.0%
AAATAGAAAGAAAGGGGGTG+AGG - Chr2:66401166-66401185 None:intergenic 40.0%
AACAGCCTCTTGTGTAAAAC+AGG - Chr2:66401406-66401425 None:intergenic 40.0%
AATAGAAAGAAAGGGGGTGA+GGG - Chr2:66401165-66401184 None:intergenic 40.0%
AATTCCCAGCTAAGGTGAAA+TGG + Chr2:66401031-66401050 MsG0280010227.01.T01:intron 40.0%
ACATTGTTGAAGTCATGCAG+TGG - Chr2:66401588-66401607 None:intergenic 40.0%
AGGTCACAATGGTTGAATCA+AGG - Chr2:66403043-66403062 None:intergenic 40.0%
ATTCAACCATTGTGACCTTG+AGG + Chr2:66403045-66403064 MsG0280010227.01.T01:intron 40.0%
CAACTATGGGATGAATCATG+CGG - Chr2:66403456-66403475 None:intergenic 40.0%
CAACTGGGGGAAAAAAATCT+AGG - Chr2:66400842-66400861 None:intergenic 40.0%
CATTGACATTAACTGACAGG+GGG + Chr2:66401008-66401027 MsG0280010227.01.T01:intron 40.0%
CCCTTACTTCTATAACACGA+AGG - Chr2:66402504-66402523 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG - Chr2:66401374-66401393 None:intergenic 40.0%
CGTGGGACCATCTTTATTAA+AGG - Chr2:66402317-66402336 None:intergenic 40.0%
CTCTTGTGTAAAACAGGCTA+AGG - Chr2:66401400-66401419 None:intergenic 40.0%
CTTCTAAACTTGTACCCCAA+GGG + Chr2:66402599-66402618 MsG0280010227.01.T01:intron 40.0%
CTTTGCTAGCTCATCAACTA+TGG - Chr2:66403470-66403489 None:intergenic 40.0%
GAGGGAAATAGAAAGAAAGG+GGG - Chr2:66401171-66401190 None:intergenic 40.0%
GCCTTCGTGTTATAGAAGTA+AGG + Chr2:66402500-66402519 MsG0280010227.01.T01:intron 40.0%
GGAGGGAAATAGAAAGAAAG+GGG - Chr2:66401172-66401191 None:intergenic 40.0%
GTTATGGACAAAGGCTTTCT+TGG + Chr2:66401992-66402011 MsG0280010227.01.T01:intron 40.0%
GTTGCGTACAATACACCAAA+TGG - Chr2:66401378-66401397 None:intergenic 40.0%
TATGGGATGCTTCCATATTG+TGG + Chr2:66403806-66403825 MsG0280010227.01.T01:three_prime_UTR 40.0%
TCTTAAGCATACAAGCAGAG+AGG - Chr2:66403096-66403115 None:intergenic 40.0%
TCTTTACGAGCCATACAAAC+TGG + Chr2:66401611-66401630 MsG0280010227.01.T01:intron 40.0%
TGAGCTAGCAAAGGAATATG+CGG + Chr2:66403477-66403496 MsG0280010227.01.T01:CDS 40.0%
TGAGCTCCCAATATTTGGTT+TGG + Chr2:66401795-66401814 MsG0280010227.01.T01:intron 40.0%
TTACTCAGACTGCAACTGAT+GGG + Chr2:66403129-66403148 MsG0280010227.01.T01:intron 40.0%
TTCTATTTCCCTCCTAGGAT+GGG + Chr2:66401178-66401197 MsG0280010227.01.T01:intron 40.0%
TTTCTATTTCCCTCCTAGGA+TGG + Chr2:66401177-66401196 MsG0280010227.01.T01:intron 40.0%
! AATGATAACTTGTGCCCTTG+GGG - Chr2:66402616-66402635 None:intergenic 40.0%
! AGAATCTGAGATTCCTGTGT+TGG + Chr2:66403399-66403418 MsG0280010227.01.T01:CDS 40.0%
! AGCTAGAATCGCTCGAATTT+TGG - Chr2:66402019-66402038 None:intergenic 40.0%
! AGGGGAGATTTAGTTTCAAG+GGG - Chr2:66401146-66401165 None:intergenic 40.0%
! AGTGGTGGGATTTGATATGT+AGG - Chr2:66401118-66401137 None:intergenic 40.0%
! CGGAGGAACTAATTTGTCAT+TGG - Chr2:66400803-66400822 None:intergenic 40.0%
! CTTAGCCTGTTTTACACAAG+AGG + Chr2:66401398-66401417 MsG0280010227.01.T01:intron 40.0%
! GAAATGATAACTTGTGCCCT+TGG - Chr2:66402618-66402637 None:intergenic 40.0%
! GAGCTCCCAATATTTGGTTT+GGG + Chr2:66401796-66401815 MsG0280010227.01.T01:intron 40.0%
! GAGGGGAGATTTAGTTTCAA+GGG - Chr2:66401147-66401166 None:intergenic 40.0%
! GTTTGCATGTTTTGCAGTTC+AGG + Chr2:66403211-66403230 MsG0280010227.01.T01:intron 40.0%
! TAGGTTGAGCTCCCAATATT+TGG + Chr2:66401790-66401809 MsG0280010227.01.T01:intron 40.0%
! TGAGGGGAGATTTAGTTTCA+AGG - Chr2:66401148-66401167 None:intergenic 40.0%
!! AGCTCCCAATATTTGGTTTG+GGG + Chr2:66401797-66401816 MsG0280010227.01.T01:intron 40.0%
!! CATAGTTGATGAGCTAGCAA+AGG + Chr2:66403468-66403487 MsG0280010227.01.T01:CDS 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG + Chr2:66402525-66402544 MsG0280010227.01.T01:intron 40.0%
!! GTTTCTTAACTTGTGCCCTA+AGG - Chr2:66402543-66402562 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG + Chr2:66402524-66402543 MsG0280010227.01.T01:intron 40.0%
AAACACCAAGATTGGGTTCC+TGG + Chr2:66401276-66401295 MsG0280010227.01.T01:intron 45.0%
AACACAGCCGTTGAAGGTTA+GGG + Chr2:66400670-66400689 MsG0280010227.01.T01:intron 45.0%
AACCGAACCCTAACCTTCAA+CGG - Chr2:66400680-66400699 None:intergenic 45.0%
AGCATTCAGGATTGATGTGC+TGG + Chr2:66402738-66402757 MsG0280010227.01.T01:intron 45.0%
AGTGTCACCAAGACACTTCT+GGG + Chr2:66401732-66401751 MsG0280010227.01.T01:intron 45.0%
ATAGAAAGAAAGGGGGTGAG+GGG - Chr2:66401164-66401183 None:intergenic 45.0%
ATTCAGGATTGATGTGCTGG+TGG + Chr2:66402741-66402760 MsG0280010227.01.T01:intron 45.0%
ATTCTCTCAATCAATGGGCG+TGG - Chr2:66402335-66402354 None:intergenic 45.0%
ATTGCAGAGAATCGTAGCTC+TGG - Chr2:66400460-66400479 None:intergenic 45.0%
CATCAGTTGCAGTCTGAGTA+AGG - Chr2:66403130-66403149 None:intergenic 45.0%
CCTCGACACCTATAATTGAG+AGG - Chr2:66401256-66401275 None:intergenic 45.0%
CTTACTCAGACTGCAACTGA+TGG + Chr2:66403128-66403147 MsG0280010227.01.T01:intron 45.0%
CTTCAGTTGCTACTCGGTAT+GGG + Chr2:66403539-66403558 MsG0280010227.01.T01:CDS 45.0%
GACGATTGGAGAGCGAATAA+GGG - Chr2:66400512-66400531 None:intergenic 45.0%
GAGCTAGCAAAGGAATATGC+GGG + Chr2:66403478-66403497 MsG0280010227.01.T01:CDS 45.0%
GATACTACAGAAGGCTGCAA+AGG - Chr2:66402077-66402096 None:intergenic 45.0%
GCAGTGGCTTCTATTACTGA+TGG + Chr2:66403355-66403374 MsG0280010227.01.T01:intron 45.0%
GCGTAAGTTGCCAGTTTGTA+TGG - Chr2:66401624-66401643 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - Chr2:66401375-66401394 None:intergenic 45.0%
GCTACGATTCTCTGCAATCA+TGG + Chr2:66400462-66400481 MsG0280010227.01.T01:exon 45.0%
GCTTCTAAACTTGTACCCCA+AGG + Chr2:66402598-66402617 MsG0280010227.01.T01:intron 45.0%
GGTCCAATACCATCTTCAGA+GGG + Chr2:66402422-66402441 MsG0280010227.01.T01:intron 45.0%
GGTGGGATTTGATATGTAGG+TGG - Chr2:66401115-66401134 None:intergenic 45.0%
GTCCAATACCATCTTCAGAG+GGG + Chr2:66402423-66402442 MsG0280010227.01.T01:intron 45.0%
GTCGAGGAAACACCAAGATT+GGG + Chr2:66401269-66401288 MsG0280010227.01.T01:intron 45.0%
GTGGGTACAAATTCACCTGA+CGG - Chr2:66401542-66401561 None:intergenic 45.0%
TAACACAGCCGTTGAAGGTT+AGG + Chr2:66400669-66400688 MsG0280010227.01.T01:intron 45.0%
TACGTATTGGAACCCCTTTC+TGG + Chr2:66400890-66400909 MsG0280010227.01.T01:intron 45.0%
TAGTTTCAAGGGGGAGAAAG+TGG - Chr2:66401136-66401155 None:intergenic 45.0%
TATATGCACTAGACTCCTCC+TGG - Chr2:66401430-66401449 None:intergenic 45.0%
TGTCGAGGAAACACCAAGAT+TGG + Chr2:66401268-66401287 MsG0280010227.01.T01:intron 45.0%
TGTGAGATGGCAGACAAAGA+AGG + Chr2:66403668-66403687 MsG0280010227.01.T01:exon 45.0%
TTCTCTCAATCAATGGGCGT+GGG - Chr2:66402334-66402353 None:intergenic 45.0%
TTCTTTGTCTGCCATCTCAC+AGG - Chr2:66403669-66403688 None:intergenic 45.0%
! CCTCTCAATTATAGGTGTCG+AGG + Chr2:66401253-66401272 MsG0280010227.01.T01:intron 45.0%
! CTTGGTGACACTGACCAAAA+TGG - Chr2:66401724-66401743 None:intergenic 45.0%
! GGGGAGATTTAGTTTCAAGG+GGG - Chr2:66401145-66401164 None:intergenic 45.0%
! GTGACTTGCAAAACTAACGG+AGG - Chr2:66400820-66400839 None:intergenic 45.0%
! TCCTGTGTTGGTCGAATTCT+GGG + Chr2:66403411-66403430 MsG0280010227.01.T01:CDS 45.0%
! TGGTTCTTGTTTCTTCGGCT+GGG - Chr2:66402916-66402935 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + Chr2:66401409-66401428 MsG0280010227.01.T01:intron 45.0%
! TTCCTGTGTTGGTCGAATTC+TGG + Chr2:66403410-66403429 MsG0280010227.01.T01:CDS 45.0%
!! GGAGAAGGATTCGAGTTGTA+CGG - Chr2:66400491-66400510 None:intergenic 45.0%
!! AATTTCAATAAATATTTATT+TGG - Chr2:66401698-66401717 None:intergenic 5.0%
ACTCTAGTCCCATCCTAGGA+GGG - Chr2:66401189-66401208 None:intergenic 50.0%
AGCCGTTGAAGGTTAGGGTT+CGG + Chr2:66400675-66400694 MsG0280010227.01.T01:intron 50.0%
AGGAACCAGGAACCCAATCT+TGG - Chr2:66401284-66401303 None:intergenic 50.0%
AGGATGGGACTAGAGTAGCA+GGG + Chr2:66401193-66401212 MsG0280010227.01.T01:intron 50.0%
AGTGCAATGTAGACTCCACG+AGG - Chr2:66401316-66401335 None:intergenic 50.0%
ATGGGATGAATCATGCGGCA+GGG - Chr2:66403451-66403470 None:intergenic 50.0%
CAGACAAAGAAGGCTTCAGC+TGG + Chr2:66403678-66403697 MsG0280010227.01.T01:three_prime_UTR 50.0%
CAGTGTCACCAAGACACTTC+TGG + Chr2:66401731-66401750 MsG0280010227.01.T01:intron 50.0%
CATAAGCTCCCGCATACGTA+GGG - Chr2:66400917-66400936 None:intergenic 50.0%
CATACGTAGGGTCCAGAAAG+GGG - Chr2:66400905-66400924 None:intergenic 50.0%
CCATACCGAGTAGCAACTGA+AGG - Chr2:66403541-66403560 None:intergenic 50.0%
CCTTCAGTTGCTACTCGGTA+TGG + Chr2:66403538-66403557 MsG0280010227.01.T01:CDS 50.0%
CGACGATTGGAGAGCGAATA+AGG - Chr2:66400513-66400532 None:intergenic 50.0%
CGGTCCAATACCATCTTCAG+AGG + Chr2:66402421-66402440 MsG0280010227.01.T01:intron 50.0%
CGTGATAACACAGCCGTTGA+AGG + Chr2:66400664-66400683 MsG0280010227.01.T01:CDS 50.0%
CTGTGACCTCAAGGTCACAA+TGG - Chr2:66403054-66403073 None:intergenic 50.0%
CTTTCTGGACCCTACGTATG+CGG + Chr2:66400905-66400924 MsG0280010227.01.T01:intron 50.0%
GCATACGTAGGGTCCAGAAA+GGG - Chr2:66400906-66400925 None:intergenic 50.0%
GTGTTTCGGATTATGGGCCT+GGG - Chr2:66401058-66401077 None:intergenic 50.0%
TAAGAGCTCCCGCATATGCA+GGG + Chr2:66401335-66401354 MsG0280010227.01.T01:intron 50.0%
TACTCTAGTCCCATCCTAGG+AGG - Chr2:66401190-66401209 None:intergenic 50.0%
TAGGATGGGACTAGAGTAGC+AGG + Chr2:66401192-66401211 MsG0280010227.01.T01:intron 50.0%
TATGGGATGAATCATGCGGC+AGG - Chr2:66403452-66403471 None:intergenic 50.0%
TCACCAAGACACTTCTGGGT+GGG + Chr2:66401736-66401755 MsG0280010227.01.T01:intron 50.0%
TGCTACTCTAGTCCCATCCT+AGG - Chr2:66401193-66401212 None:intergenic 50.0%
TGGAGAGCGAATAAGGGAGA+AGG - Chr2:66400506-66400525 None:intergenic 50.0%
TGGGTTCCTGGTTCCTATCA+TGG + Chr2:66401288-66401307 MsG0280010227.01.T01:intron 50.0%
TGTGTTTCGGATTATGGGCC+TGG - Chr2:66401059-66401078 None:intergenic 50.0%
TGTTTCGGATTATGGGCCTG+GGG - Chr2:66401057-66401076 None:intergenic 50.0%
TTCAAGGGGGAGAAAGTGGT+GGG - Chr2:66401132-66401151 None:intergenic 50.0%
TTTCAAGGGGGAGAAAGTGG+TGG - Chr2:66401133-66401152 None:intergenic 50.0%
TTTCTGGACCCTACGTATGC+GGG + Chr2:66400906-66400925 MsG0280010227.01.T01:intron 50.0%
! CAACACCTCGTGAAAGGCAT+TGG - Chr2:66401516-66401535 None:intergenic 50.0%
! CTCCCCTCTGAAGATGGTAT+TGG - Chr2:66402428-66402447 None:intergenic 50.0%
! CTGGGTGGGTTCACAATATC+TGG + Chr2:66401750-66401769 MsG0280010227.01.T01:intron 50.0%
! CTGGTTCTTGTTTCTTCGGC+TGG - Chr2:66402917-66402936 None:intergenic 50.0%
!! GAAGGATTCGAGTTGTACGG+TGG - Chr2:66400488-66400507 None:intergenic 50.0%
AAGTCATGCAGTGGCCACGT+GGG - Chr2:66401579-66401598 None:intergenic 55.0%
ACAGGGGGAATTCCCAGCTA+AGG + Chr2:66401023-66401042 MsG0280010227.01.T01:intron 55.0%
ACCGCGACGAACAACATTCG+AGG - Chr2:66400623-66400642 None:intergenic 55.0%
ACTCCACGAGGCTCCATGAT+AGG - Chr2:66401304-66401323 None:intergenic 55.0%
AGCTAAGGTGAAATGGCCCC+AGG + Chr2:66401038-66401057 MsG0280010227.01.T01:intron 55.0%
AGCTCCTTGTCTTCTCGGGA+AGG + Chr2:66402446-66402465 MsG0280010227.01.T01:intron 55.0%
AGCTTGAGGCCGGTGTATTG+AGG - Chr2:66400562-66400581 None:intergenic 55.0%
AGGGGAGCTCCTTGTCTTCT+CGG + Chr2:66402441-66402460 MsG0280010227.01.T01:intron 55.0%
ATCACGAGCCTCACACACGA+CGG - Chr2:66400650-66400669 None:intergenic 55.0%
CGACGAACAACATTCGAGGC+GGG - Chr2:66400619-66400638 None:intergenic 55.0%
CGCATACGTAGGGTCCAGAA+AGG - Chr2:66400907-66400926 None:intergenic 55.0%
CGGTGACAACACCTCGTGAA+AGG - Chr2:66401522-66401541 None:intergenic 55.0%
CTAAGAGCTCCCGCATATGC+AGG + Chr2:66401334-66401353 MsG0280010227.01.T01:intron 55.0%
CTACCCTTCCCGAGAAGACA+AGG - Chr2:66402453-66402472 None:intergenic 55.0%
GAATTCTGGGCTCCATGGTG+TGG + Chr2:66403424-66403443 MsG0280010227.01.T01:CDS 55.0%
GACTGCAACTGATGGGAGCT+TGG + Chr2:66403136-66403155 MsG0280010227.01.T01:intron 55.0%
GAGGCTCCATGATAGGAACC+AGG - Chr2:66401297-66401316 None:intergenic 55.0%
GCATAAGCTCCCGCATACGT+AGG - Chr2:66400918-66400937 None:intergenic 55.0%
GCCCAGAATTCGACCAACAC+AGG - Chr2:66403415-66403434 None:intergenic 55.0%
GCCGCGTTTCCTCAATACAC+CGG + Chr2:66400550-66400569 MsG0280010227.01.T01:CDS 55.0%
GCCGGTGTATTGAGGAAACG+CGG - Chr2:66400554-66400573 None:intergenic 55.0%
GCCTCGAATGTTGTTCGTCG+CGG + Chr2:66400619-66400638 MsG0280010227.01.T01:CDS 55.0%
GCGACGAACAACATTCGAGG+CGG - Chr2:66400620-66400639 None:intergenic 55.0%
GCTCCTTGTCTTCTCGGGAA+GGG + Chr2:66402447-66402466 MsG0280010227.01.T01:intron 55.0%
GGGGCCATTTCACCTTAGCT+GGG - Chr2:66401038-66401057 None:intergenic 55.0%
GTCACCAAGACACTTCTGGG+TGG + Chr2:66401735-66401754 MsG0280010227.01.T01:intron 55.0%
GTGGACCAATGCCTTTCACG+AGG + Chr2:66401508-66401527 MsG0280010227.01.T01:intron 55.0%
GTTCCTATCATGGAGCCTCG+TGG + Chr2:66401298-66401317 MsG0280010227.01.T01:intron 55.0%
TCGAATGTTGTTCGTCGCGG+TGG + Chr2:66400622-66400641 MsG0280010227.01.T01:CDS 55.0%
TGGGGCCATTTCACCTTAGC+TGG - Chr2:66401039-66401058 None:intergenic 55.0%
TGGTCGAATTCTGGGCTCCA+TGG + Chr2:66403419-66403438 MsG0280010227.01.T01:CDS 55.0%
! AAGGAGCTCCCCTCTGAAGA+TGG - Chr2:66402434-66402453 None:intergenic 55.0%
! CACAAGAGGCTGTTTCCAGG+AGG + Chr2:66401412-66401431 MsG0280010227.01.T01:intron 55.0%
!! GAACCCACCCAGAAGTGTCT+TGG - Chr2:66401742-66401761 None:intergenic 55.0%
CATATGCAGGGTCCGGGAAG+GGG + Chr2:66401347-66401366 MsG0280010227.01.T01:intron 60.0%
CTCCAATCGTCGCTTCTCGC+CGG + Chr2:66400521-66400540 MsG0280010227.01.T01:CDS 60.0%
CTTCCCGGACCCTGCATATG+CGG - Chr2:66401347-66401366 None:intergenic 60.0%
GAAGTCATGCAGTGGCCACG+TGG - Chr2:66401580-66401599 None:intergenic 60.0%
GACCGAGTGAGAGAGACCAG+CGG - Chr2:66400406-66400425 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + Chr2:66401346-66401365 MsG0280010227.01.T01:intron 60.0%
GGACTAGAGTAGCAGGGCAC+GGG + Chr2:66401199-66401218 MsG0280010227.01.T01:intron 60.0%
GGGACTAGAGTAGCAGGGCA+CGG + Chr2:66401198-66401217 MsG0280010227.01.T01:intron 60.0%
GGGGAGCTCCTTGTCTTCTC+GGG + Chr2:66402442-66402461 MsG0280010227.01.T01:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG - Chr2:66401346-66401365 None:intergenic 60.0%
TTGACTCCGCAGACGAGTGG+CGG - Chr2:66400596-66400615 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - Chr2:66401362-66401381 None:intergenic 60.0%
!! CACGAGGTGTTGTCACCGTC+AGG + Chr2:66401524-66401543 MsG0280010227.01.T01:intron 60.0%
ATGCGGCAGGGACCACACCA+TGG - Chr2:66403439-66403458 None:intergenic 65.0%
CAGTCTCCGCCACTCGTCTG+CGG + Chr2:66400587-66400606 MsG0280010227.01.T01:CDS 65.0%
CGCATATGCAGGGTCCGGGA+AGG + Chr2:66401345-66401364 MsG0280010227.01.T01:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + Chr2:66401360-66401379 MsG0280010227.01.T01:intron 65.0%
CGGTGGAACCGTCGTGTGTG+AGG + Chr2:66400639-66400658 MsG0280010227.01.T01:CDS 65.0%
CTCCCGCATATGCAGGGTCC+GGG + Chr2:66401341-66401360 MsG0280010227.01.T01:intron 65.0%
CTCCGGCGAGAAGCGACGAT+TGG - Chr2:66400526-66400545 None:intergenic 65.0%
GAGGAAACGCGGCAGTGCTC+CGG - Chr2:66400543-66400562 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + Chr2:66401340-66401359 MsG0280010227.01.T01:intron 65.0%
! CGCCGCTGGTCTCTCTCACT+CGG + Chr2:66400401-66400420 MsG0280010227.01.T01:five_prime_UTR 65.0%
! CGGAGACTGGTCGGAGCTTG+AGG - Chr2:66400576-66400595 None:intergenic 65.0%
! GACGAGTGGCGGAGACTGGT+CGG - Chr2:66400585-66400604 None:intergenic 65.0%
! GACTGGTCGGAGCTTGAGGC+CGG - Chr2:66400572-66400591 None:intergenic 65.0%
! GGGTTGACTCCGCAGACGAG+TGG - Chr2:66400599-66400618 None:intergenic 65.0%
! CGCAGACGAGTGGCGGAGAC+TGG - Chr2:66400589-66400608 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 66400339 66403908 66400339 ID=MsG0280010227.01;Name=MsG0280010227.01
Chr2 mRNA 66400339 66403908 66400339 ID=MsG0280010227.01.T01;Parent=MsG0280010227.01;Name=MsG0280010227.01.T01;_AED=0.49;_eAED=0.49;_QI=142|1|1|1|1|1|2|236|172
Chr2 exon 66400339 66400685 66400339 ID=MsG0280010227.01.T01:exon:18218;Parent=MsG0280010227.01.T01
Chr2 exon 66403359 66403908 66403359 ID=MsG0280010227.01.T01:exon:18219;Parent=MsG0280010227.01.T01
Chr2 five_prime_UTR 66400339 66400480 66400339 ID=MsG0280010227.01.T01:five_prime_utr;Parent=MsG0280010227.01.T01
Chr2 CDS 66400481 66400685 66400481 ID=MsG0280010227.01.T01:cds;Parent=MsG0280010227.01.T01
Chr2 CDS 66403359 66403672 66403359 ID=MsG0280010227.01.T01:cds;Parent=MsG0280010227.01.T01
Chr2 three_prime_UTR 66403673 66403908 66403673 ID=MsG0280010227.01.T01:three_prime_utr;Parent=MsG0280010227.01.T01
Gene Sequence

>MsG0280010227.01.T01

ATGGCCACCGTACAACTCGAATCCTTCTCCCTTATTCGCTCTCCAATCGTCGCTTCTCGCCGGAGCACTGCCGCGTTTCCTCAATACACCGGCCTCAAGCTCCGACCAGTCTCCGCCACTCGTCTGCGGAGTCAACCCGCCTCGAATGTTGTTCGTCGCGGTGGAACCGTCGTGTGTGAGGCTCGTGATAACACAGCCGTTGAAGTGGCTTCTATTACTGATGGAAATTGGCAATCCCTTGTCATAGAATCTGAGATTCCTGTGTTGGTCGAATTCTGGGCTCCATGGTGTGGTCCCTGCCGCATGATTCATCCCATAGTTGATGAGCTAGCAAAGGAATATGCGGGTAAGCTCAAGTGTTACAAACTCAATACTGATGAAAGTCCTTCAGTTGCTACTCGGTATGGGATTCGAAGTATTCCAACTGTCATTTTCTTCAAGAACGGTGAAAAGAAAGATACAGTTATTGGTGCTGTGCCCAAAGCAACATTGACCACAAATATAGAAAAATTCCTGTGA

Protein sequence

>MsG0280010227.01.T01

MATVQLESFSLIRSPIVASRRSTAAFPQYTGLKLRPVSATRLRSQPASNVVRRGGTVVCEARDNTAVEVASITDGNWQSLVIESEIPVLVEFWAPWCGPCRMIHPIVDELAKEYAGKLKCYKLNTDESPSVATRYGIRSIPTVIFFKNGEKKDTVIGAVPKATLTTNIEKFL*