Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010794.01.T01 | XP_013465182.1 | 99.535 | 215 | 1 | 0 | 1 | 215 | 1 | 215 | 6.10E-155 | 438 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010794.01.T01 | Q40521 | 81.429 | 210 | 39 | 0 | 5 | 214 | 8 | 217 | 3.22E-127 | 360 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048150.01 | MsG0280010794.01 | 0.817313 | 3.518034e-52 | 2.553192e-49 |
| MsG0080049059.01 | MsG0280010794.01 | 0.825540 | 4.433151e-54 | 4.052422e-51 |
| MsG0180000799.01 | MsG0280010794.01 | 0.807858 | 4.115454e-50 | 2.317367e-47 |
| MsG0180003409.01 | MsG0280010794.01 | 0.829329 | 5.470105e-55 | 5.581547e-52 |
| MsG0180004761.01 | MsG0280010794.01 | -0.831972 | 1.232376e-55 | 1.358760e-52 |
| MsG0180005272.01 | MsG0280010794.01 | 0.820883 | 5.421077e-53 | 4.342894e-50 |
| MsG0180005781.01 | MsG0280010794.01 | 0.814591 | 1.425094e-51 | 9.602063e-49 |
| MsG0180006226.01 | MsG0280010794.01 | -0.836211 | 1.068866e-56 | 1.338078e-53 |
| MsG0280006424.01 | MsG0280010794.01 | 0.801402 | 9.158290e-49 | 4.369620e-46 |
| MsG0280010633.01 | MsG0280010794.01 | 0.811205 | 7.866245e-51 | 4.839324e-48 |
| MsG0280010794.01 | MsG0280011149.01 | 0.820162 | 7.933244e-53 | 6.229764e-50 |
| MsG0280010794.01 | MsG0380014575.01 | -0.811293 | 7.526764e-51 | 4.641088e-48 |
| MsG0280010794.01 | MsG0380015630.01 | 0.827971 | 1.164852e-54 | 1.142232e-51 |
| MsG0280010794.01 | MsG0380015793.01 | -0.849117 | 3.973217e-60 | 7.455245e-57 |
| MsG0280010794.01 | MsG0380017881.01 | 0.800339 | 1.509657e-48 | 7.011913e-46 |
| MsG0280010794.01 | MsG0380017935.01 | -0.840699 | 7.429082e-58 | 1.066844e-54 |
| MsG0280010794.01 | MsG0380018007.01 | 0.816753 | 4.700995e-52 | 3.359899e-49 |
| MsG0280010794.01 | MsG0480018788.01 | -0.821829 | 3.279055e-53 | 2.697392e-50 |
| MsG0280010794.01 | MsG0480019038.01 | 0.823908 | 1.075131e-53 | 9.381344e-51 |
| MsG0280010794.01 | MsG0480020372.01 | 0.824616 | 7.329614e-54 | 6.526536e-51 |
| MsG0280010794.01 | MsG0480022167.01 | 0.815033 | 1.137194e-51 | 7.754110e-49 |
| MsG0280010794.01 | MsG0480022909.01 | 0.837782 | 4.242513e-57 | 5.570199e-54 |
| MsG0280010794.01 | MsG0480023447.01 | 0.807265 | 5.500699e-50 | 3.050093e-47 |
| MsG0280010794.01 | MsG0580025575.01 | 0.831104 | 2.016807e-55 | 2.166953e-52 |
| MsG0280010794.01 | MsG0580026157.01 | 0.833016 | 6.791598e-56 | 7.723744e-53 |
| MsG0280010794.01 | MsG0680030315.01 | 0.833266 | 5.885709e-56 | 6.743212e-53 |
| MsG0280010794.01 | MsG0680030436.01 | 0.804263 | 2.349666e-49 | 1.206006e-46 |
| MsG0280010794.01 | MsG0680034061.01 | 0.861310 | 1.122178e-63 | 3.161914e-60 |
| MsG0280010794.01 | MsG0680034392.01 | 0.822421 | 2.390874e-53 | 2.000281e-50 |
| MsG0280010794.01 | MsG0680034395.01 | 0.834973 | 2.198339e-56 | 2.651137e-53 |
| MsG0280010794.01 | MsG0680035777.01 | 0.807424 | 5.088435e-50 | 2.833198e-47 |
| MsG0280010794.01 | MsG0780038837.01 | 0.846604 | 1.957054e-59 | 3.386737e-56 |
| MsG0280010794.01 | MsG0780038945.01 | 0.815301 | 9.918042e-52 | 6.812144e-49 |
| MsG0280010794.01 | MsG0780039950.01 | 0.811242 | 7.721132e-51 | 4.754740e-48 |
| MsG0280010794.01 | MsG0780040338.01 | 0.804703 | 1.901975e-49 | 9.873947e-47 |
| MsG0280010794.01 | MsG0780040543.01 | 0.812342 | 4.450211e-51 | 2.822297e-48 |
| MsG0280010794.01 | MsG0780040861.01 | 0.830476 | 2.874310e-55 | 3.031528e-52 |
| MsG0280010794.01 | MsG0780041295.01 | 0.809579 | 1.764583e-50 | 1.039994e-47 |
| MsG0280010794.01 | MsG0880042494.01 | 0.832569 | 8.771682e-56 | 9.842702e-53 |
| MsG0280010794.01 | MsG0880042604.01 | 0.811874 | 5.627511e-51 | 3.523796e-48 |
| MsG0280010794.01 | MsG0880042811.01 | 0.822462 | 2.338215e-53 | 1.958468e-50 |
| MsG0280010794.01 | MsG0880042860.01 | 0.847786 | 9.274900e-60 | 1.666860e-56 |
| MsG0280010794.01 | MsG0880044792.01 | 0.832532 | 8.959348e-56 | 1.004199e-52 |
| MsG0280010794.01 | MsG0880045054.01 | 0.807208 | 5.655174e-50 | 3.131102e-47 |
| MsG0280010794.01 | MsG0880045631.01 | 0.821706 | 3.501840e-53 | 2.870549e-50 |
| MsG0280010794.01 | MsG0880046177.01 | 0.819055 | 1.419993e-52 | 1.081198e-49 |
| MsG0280010794.01 | MsG0880046364.01 | 0.800366 | 1.490939e-48 | 6.929637e-46 |
| MsG0280010794.01 | MsG0880046444.01 | 0.802178 | 6.346447e-49 | 3.088177e-46 |
| MsG0280010794.01 | MsG0880046933.01 | 0.826777 | 2.251817e-54 | 2.132242e-51 |
| MsG0280010794.01 | MsG0880046947.01 | 0.805372 | 1.377883e-49 | 7.277376e-47 |
| MsG0280010794.01 | MsG0880047455.01 | -0.800212 | 1.602078e-48 | 7.417067e-46 |
| MsG0280010794.01 | MsG0880047531.01 | 0.860163 | 2.502038e-63 | 6.776008e-60 |
| MsG0280010794.01 | MsG0880047607.01 | 0.812164 | 4.866449e-51 | 3.071425e-48 |
| MsG0280007133.01 | MsG0280010794.01 | -0.800974 | 1.120578e-48 | 5.289411e-46 |
| MsG0280007790.01 | MsG0280010794.01 | 0.804859 | 1.764133e-49 | 9.195999e-47 |
| MsG0280007876.01 | MsG0280010794.01 | 0.836403 | 9.553569e-57 | 1.202654e-53 |
| MsG0280007896.01 | MsG0280010794.01 | 0.850285 | 1.874561e-60 | 3.653555e-57 |
| MsG0280008134.01 | MsG0280010794.01 | 0.806672 | 7.340309e-50 | 4.007919e-47 |
| MsG0280008286.01 | MsG0280010794.01 | 0.815381 | 9.516392e-52 | 6.550971e-49 |
| MsG0280008327.01 | MsG0280010794.01 | 0.834485 | 2.916931e-56 | 3.466643e-53 |
| MsG0280008820.01 | MsG0280010794.01 | -0.818747 | 1.668181e-52 | 1.259385e-49 |
| MsG0280008885.01 | MsG0280010794.01 | 0.806114 | 9.625184e-50 | 5.181313e-47 |
| MsG0280009111.01 | MsG0280010794.01 | 0.814397 | 1.573026e-51 | 1.054369e-48 |
| MsG0280009241.01 | MsG0280010794.01 | 0.830791 | 2.406351e-55 | 2.561799e-52 |
| MsG0280010002.01 | MsG0280010794.01 | 0.819837 | 9.417305e-53 | 7.328301e-50 |
| MsG0280010173.01 | MsG0280010794.01 | 0.813272 | 2.783826e-51 | 1.809697e-48 |
| MsG0280010196.01 | MsG0280010794.01 | 0.804583 | 2.015341e-49 | 1.042989e-46 |
| MsG0280010227.01 | MsG0280010794.01 | -0.804784 | 1.828997e-49 | 9.515412e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010794.01.T01 | MTR_2g090865 | 99.535 | 215 | 1 | 0 | 1 | 215 | 1 | 215 | 7.38e-159 | 438 |
| MsG0280010794.01.T01 | MTR_4g088090 | 81.019 | 216 | 38 | 2 | 1 | 213 | 1 | 216 | 1.45e-128 | 361 |
| MsG0280010794.01.T01 | MTR_2g014990 | 80.556 | 216 | 39 | 2 | 1 | 213 | 1 | 216 | 2.36e-128 | 361 |
| MsG0280010794.01.T01 | MTR_4g079350 | 81.019 | 216 | 38 | 2 | 1 | 213 | 1 | 216 | 3.73e-128 | 360 |
| MsG0280010794.01.T01 | MTR_2g075950 | 76.415 | 212 | 47 | 3 | 5 | 214 | 7 | 217 | 6.84e-118 | 334 |
| MsG0280010794.01.T01 | MTR_2g083860 | 72.170 | 212 | 55 | 2 | 5 | 213 | 7 | 217 | 9.45e-108 | 308 |
| MsG0280010794.01.T01 | MTR_3g069510 | 67.453 | 212 | 66 | 2 | 4 | 213 | 5 | 215 | 3.73e-102 | 294 |
| MsG0280010794.01.T01 | MTR_2g005510 | 66.038 | 212 | 69 | 1 | 5 | 213 | 9 | 220 | 2.33e-101 | 293 |
| MsG0280010794.01.T01 | MTR_4g064897 | 67.136 | 213 | 66 | 3 | 4 | 214 | 5 | 215 | 7.90e-101 | 291 |
| MsG0280010794.01.T01 | MTR_1g052475 | 58.065 | 217 | 85 | 2 | 2 | 212 | 6 | 222 | 3.00e-89 | 262 |
| MsG0280010794.01.T01 | MTR_6g079550 | 58.768 | 211 | 84 | 3 | 5 | 213 | 6 | 215 | 2.27e-87 | 257 |
| MsG0280010794.01.T01 | MTR_3g086980 | 55.814 | 215 | 91 | 1 | 2 | 212 | 7 | 221 | 5.43e-86 | 254 |
| MsG0280010794.01.T01 | MTR_8g089985 | 56.881 | 218 | 89 | 2 | 2 | 214 | 8 | 225 | 1.87e-85 | 252 |
| MsG0280010794.01.T01 | MTR_0262s0050 | 55.814 | 215 | 90 | 2 | 2 | 212 | 6 | 219 | 2.89e-85 | 252 |
| MsG0280010794.01.T01 | MTR_8g027220 | 55.140 | 214 | 93 | 1 | 4 | 214 | 19 | 232 | 8.64e-81 | 241 |
| MsG0280010794.01.T01 | MTR_7g405790 | 58.937 | 207 | 82 | 2 | 10 | 213 | 14 | 220 | 6.32e-79 | 236 |
| MsG0280010794.01.T01 | MTR_1g078200 | 55.189 | 212 | 88 | 2 | 9 | 213 | 12 | 223 | 9.09e-77 | 230 |
| MsG0280010794.01.T01 | MTR_8g036220 | 60.221 | 181 | 71 | 1 | 2 | 181 | 6 | 186 | 2.48e-75 | 227 |
| MsG0280010794.01.T01 | MTR_7g051940 | 56.373 | 204 | 89 | 0 | 10 | 213 | 12 | 215 | 7.26e-75 | 225 |
| MsG0280010794.01.T01 | MTR_8g107070 | 56.522 | 207 | 86 | 2 | 5 | 208 | 8 | 213 | 1.39e-74 | 226 |
| MsG0280010794.01.T01 | MTR_7g117910 | 48.598 | 214 | 89 | 4 | 6 | 214 | 15 | 212 | 6.91e-65 | 200 |
| MsG0280010794.01.T01 | MTR_2g027660 | 46.009 | 213 | 104 | 2 | 8 | 213 | 3 | 211 | 2.06e-61 | 191 |
| MsG0280010794.01.T01 | MTR_6g021790 | 43.868 | 212 | 110 | 2 | 8 | 213 | 3 | 211 | 2.41e-58 | 183 |
| MsG0280010794.01.T01 | MTR_7g081700 | 45.498 | 211 | 106 | 1 | 4 | 214 | 1 | 202 | 6.75e-57 | 179 |
| MsG0280010794.01.T01 | MTR_8g031660 | 46.698 | 212 | 99 | 3 | 8 | 213 | 3 | 206 | 1.36e-55 | 176 |
| MsG0280010794.01.T01 | MTR_8g006970 | 47.087 | 206 | 101 | 2 | 9 | 214 | 20 | 217 | 2.22e-54 | 173 |
| MsG0280010794.01.T01 | MTR_2g005500 | 44.928 | 207 | 104 | 2 | 7 | 212 | 5 | 202 | 5.19e-54 | 172 |
| MsG0280010794.01.T01 | MTR_8g031870 | 53.165 | 158 | 74 | 0 | 10 | 167 | 5 | 162 | 1.13e-52 | 168 |
| MsG0280010794.01.T01 | MTR_8g006970 | 52.071 | 169 | 81 | 0 | 4 | 172 | 1 | 169 | 3.26e-52 | 166 |
| MsG0280010794.01.T01 | MTR_1g068730 | 42.453 | 212 | 112 | 3 | 7 | 214 | 11 | 216 | 1.40e-51 | 166 |
| MsG0280010794.01.T01 | MTR_7g100020 | 42.991 | 214 | 108 | 4 | 7 | 214 | 11 | 216 | 2.51e-51 | 165 |
| MsG0280010794.01.T01 | MTR_1g115325 | 42.308 | 208 | 114 | 3 | 7 | 212 | 11 | 214 | 7.13e-51 | 164 |
| MsG0280010794.01.T01 | MTR_1g068740 | 41.981 | 212 | 113 | 3 | 7 | 214 | 11 | 216 | 7.50e-51 | 164 |
| MsG0280010794.01.T01 | MTR_8g031680 | 40.865 | 208 | 121 | 1 | 8 | 213 | 3 | 210 | 3.45e-50 | 162 |
| MsG0280010794.01.T01 | MTR_8g093740 | 46.190 | 210 | 101 | 7 | 6 | 212 | 8 | 208 | 2.61e-49 | 160 |
| MsG0280010794.01.T01 | MTR_2g096550 | 40.826 | 218 | 109 | 5 | 3 | 212 | 7 | 212 | 9.10e-48 | 156 |
| MsG0280010794.01.T01 | MTR_8g031830 | 49.375 | 160 | 81 | 0 | 10 | 169 | 5 | 164 | 1.07e-47 | 155 |
| MsG0280010794.01.T01 | MTR_1g029450 | 45.455 | 209 | 105 | 6 | 7 | 213 | 13 | 214 | 1.11e-47 | 156 |
| MsG0280010794.01.T01 | MTR_3g096350 | 43.925 | 214 | 106 | 6 | 3 | 212 | 4 | 207 | 1.41e-46 | 153 |
| MsG0280010794.01.T01 | MTR_4g063160 | 41.315 | 213 | 110 | 5 | 7 | 212 | 11 | 215 | 2.08e-46 | 153 |
| MsG0280010794.01.T01 | MTR_1g094220 | 44.720 | 161 | 88 | 1 | 13 | 172 | 33 | 193 | 2.45e-45 | 149 |
| MsG0280010794.01.T01 | MTR_1g094220 | 44.937 | 158 | 86 | 1 | 13 | 169 | 33 | 190 | 8.36e-45 | 148 |
| MsG0280010794.01.T01 | MTR_3g064390 | 43.125 | 160 | 91 | 0 | 13 | 172 | 12 | 171 | 9.76e-45 | 148 |
| MsG0280010794.01.T01 | MTR_1g094220 | 46.104 | 154 | 82 | 1 | 13 | 165 | 33 | 186 | 2.80e-44 | 147 |
| MsG0280010794.01.T01 | MTR_1g094220 | 44.512 | 164 | 89 | 2 | 13 | 175 | 33 | 195 | 5.47e-44 | 147 |
| MsG0280010794.01.T01 | MTR_5g076590 | 42.500 | 160 | 92 | 0 | 13 | 172 | 12 | 171 | 1.96e-43 | 145 |
| MsG0280010794.01.T01 | MTR_4g099470 | 42.775 | 173 | 90 | 1 | 42 | 214 | 15 | 178 | 7.97e-43 | 142 |
| MsG0280010794.01.T01 | MTR_7g103070 | 42.788 | 208 | 111 | 4 | 8 | 213 | 13 | 214 | 1.19e-42 | 143 |
| MsG0280010794.01.T01 | MTR_1g068730 | 53.659 | 123 | 57 | 0 | 6 | 128 | 10 | 132 | 1.35e-42 | 142 |
| MsG0280010794.01.T01 | MTR_1g068740 | 53.659 | 123 | 57 | 0 | 6 | 128 | 10 | 132 | 2.74e-42 | 142 |
| MsG0280010794.01.T01 | MTR_1g090717 | 42.453 | 212 | 111 | 5 | 5 | 213 | 9 | 212 | 1.02e-41 | 140 |
| MsG0280010794.01.T01 | MTR_1g062760 | 43.478 | 207 | 108 | 5 | 8 | 212 | 11 | 210 | 1.30e-41 | 140 |
| MsG0280010794.01.T01 | MTR_2g102060 | 36.634 | 202 | 115 | 2 | 13 | 214 | 12 | 200 | 3.41e-41 | 139 |
| MsG0280010794.01.T01 | MTR_3g087160 | 33.333 | 195 | 112 | 1 | 12 | 206 | 10 | 186 | 1.02e-38 | 133 |
| MsG0280010794.01.T01 | MTR_8g103550 | 39.375 | 160 | 97 | 0 | 13 | 172 | 11 | 170 | 1.80e-38 | 132 |
| MsG0280010794.01.T01 | MTR_4g098950 | 33.178 | 214 | 113 | 3 | 12 | 213 | 10 | 205 | 2.00e-38 | 132 |
| MsG0280010794.01.T01 | MTR_5g013900 | 34.694 | 196 | 109 | 2 | 12 | 206 | 10 | 187 | 4.82e-38 | 131 |
| MsG0280010794.01.T01 | MTR_8g090215 | 35.057 | 174 | 113 | 0 | 12 | 185 | 10 | 183 | 6.87e-38 | 130 |
| MsG0280010794.01.T01 | MTR_1g097420 | 40.964 | 166 | 89 | 4 | 11 | 168 | 8 | 172 | 6.12e-36 | 125 |
| MsG0280010794.01.T01 | MTR_3g096350 | 52.344 | 128 | 56 | 4 | 3 | 127 | 4 | 129 | 1.60e-35 | 123 |
| MsG0280010794.01.T01 | MTR_8g092020 | 39.759 | 166 | 91 | 4 | 11 | 168 | 12 | 176 | 4.93e-35 | 123 |
| MsG0280010794.01.T01 | MTR_3g096350 | 52.344 | 128 | 56 | 4 | 3 | 127 | 4 | 129 | 5.24e-35 | 122 |
| MsG0280010794.01.T01 | MTR_4g069850 | 34.928 | 209 | 116 | 7 | 11 | 211 | 8 | 204 | 2.65e-34 | 121 |
| MsG0280010794.01.T01 | MTR_2g101890 | 39.286 | 168 | 94 | 4 | 11 | 171 | 10 | 176 | 3.67e-34 | 121 |
| MsG0280010794.01.T01 | MTR_4g012940 | 39.506 | 162 | 91 | 3 | 11 | 165 | 8 | 169 | 2.00e-33 | 119 |
| MsG0280010794.01.T01 | MTR_3g064390 | 44.000 | 125 | 70 | 0 | 13 | 137 | 12 | 136 | 3.32e-33 | 117 |
| MsG0280010794.01.T01 | MTR_8g093740 | 43.678 | 174 | 87 | 6 | 42 | 212 | 10 | 175 | 1.32e-32 | 116 |
| MsG0280010794.01.T01 | MTR_1g069245 | 64.211 | 95 | 30 | 2 | 24 | 118 | 109 | 199 | 5.73e-32 | 116 |
| MsG0280010794.01.T01 | MTR_6g039490 | 37.576 | 165 | 96 | 3 | 11 | 168 | 8 | 172 | 6.04e-32 | 116 |
| MsG0280010794.01.T01 | MTR_1g097420 | 38.095 | 168 | 93 | 5 | 9 | 168 | 35 | 199 | 5.98e-30 | 111 |
| MsG0280010794.01.T01 | MTR_7g103070 | 42.405 | 158 | 83 | 4 | 58 | 213 | 7 | 158 | 3.74e-29 | 107 |
| MsG0280010794.01.T01 | MTR_2g005500 | 32.850 | 207 | 89 | 3 | 7 | 212 | 5 | 162 | 1.26e-25 | 98.2 |
| MsG0280010794.01.T01 | MTR_3g107717 | 32.258 | 155 | 102 | 2 | 12 | 166 | 14 | 165 | 1.17e-23 | 94.4 |
| MsG0280010794.01.T01 | MTR_3g107713 | 32.258 | 155 | 102 | 2 | 12 | 166 | 14 | 165 | 1.41e-23 | 94.4 |
| MsG0280010794.01.T01 | MTR_3g107707 | 32.258 | 155 | 102 | 2 | 12 | 166 | 14 | 165 | 1.43e-23 | 94.4 |
| MsG0280010794.01.T01 | MTR_2g078000 | 81.633 | 49 | 9 | 0 | 72 | 120 | 46 | 94 | 1.51e-23 | 90.9 |
| MsG0280010794.01.T01 | MTR_8g031810 | 43.689 | 103 | 44 | 1 | 10 | 112 | 5 | 93 | 6.33e-21 | 84.0 |
| MsG0280010794.01.T01 | MTR_4g113620 | 30.968 | 155 | 95 | 4 | 12 | 166 | 14 | 156 | 5.95e-19 | 81.6 |
| MsG0280010794.01.T01 | MTR_2g078560 | 48.980 | 98 | 40 | 2 | 73 | 164 | 54 | 147 | 1.28e-18 | 82.8 |
| MsG0280010794.01.T01 | MTR_1452s0010 | 41.772 | 79 | 46 | 0 | 31 | 109 | 1 | 79 | 3.61e-18 | 77.0 |
| MsG0280010794.01.T01 | MTR_4g073250 | 31.282 | 195 | 115 | 7 | 11 | 190 | 6 | 196 | 6.55e-17 | 75.9 |
| MsG0280010794.01.T01 | MTR_5g022600 | 37.500 | 120 | 72 | 3 | 11 | 129 | 6 | 123 | 6.89e-17 | 75.9 |
| MsG0280010794.01.T01 | MTR_4g088055 | 37.500 | 120 | 72 | 3 | 11 | 129 | 6 | 123 | 1.09e-16 | 75.5 |
| MsG0280010794.01.T01 | MTR_2g090875 | 37.500 | 120 | 72 | 3 | 11 | 129 | 6 | 123 | 1.53e-16 | 75.1 |
| MsG0280010794.01.T01 | MTR_8g075240 | 37.500 | 120 | 72 | 3 | 11 | 129 | 6 | 123 | 2.52e-16 | 74.3 |
| MsG0280010794.01.T01 | MTR_3g078260 | 31.138 | 167 | 101 | 5 | 11 | 165 | 8 | 172 | 4.33e-16 | 74.3 |
| MsG0280010794.01.T01 | MTR_6g087980 | 36.364 | 121 | 74 | 3 | 11 | 130 | 6 | 124 | 1.05e-15 | 73.2 |
| MsG0280010794.01.T01 | MTR_3g053480 | 62.500 | 48 | 18 | 0 | 6 | 53 | 11 | 58 | 6.94e-15 | 67.4 |
| MsG0280010794.01.T01 | MTR_1686s0010 | 33.696 | 92 | 61 | 0 | 31 | 122 | 1 | 92 | 1.17e-14 | 67.4 |
| MsG0280010794.01.T01 | MTR_8g099250 | 64.583 | 48 | 17 | 0 | 6 | 53 | 11 | 58 | 4.02e-14 | 65.1 |
| MsG0280010794.01.T01 | MTR_1g059590 | 31.737 | 167 | 101 | 5 | 8 | 171 | 395 | 551 | 2.79e-13 | 68.6 |
| MsG0280010794.01.T01 | MTR_1g059590 | 31.737 | 167 | 101 | 5 | 8 | 171 | 428 | 584 | 3.12e-13 | 68.2 |
| MsG0280010794.01.T01 | MTR_3g078260 | 34.483 | 116 | 73 | 3 | 11 | 125 | 8 | 121 | 3.62e-13 | 64.7 |
| MsG0280010794.01.T01 | MTR_5g092060 | 24.852 | 169 | 121 | 2 | 12 | 175 | 105 | 272 | 1.58e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010794.01.T01 | AT5G60860 | 81.429 | 210 | 38 | 1 | 5 | 213 | 7 | 216 | 8.61e-127 | 357 |
| MsG0280010794.01.T01 | AT3G15060 | 78.199 | 211 | 45 | 1 | 5 | 214 | 7 | 217 | 4.91e-123 | 347 |
| MsG0280010794.01.T01 | AT4G18430 | 76.852 | 216 | 47 | 2 | 1 | 213 | 1 | 216 | 3.38e-122 | 345 |
| MsG0280010794.01.T01 | AT1G28550 | 76.498 | 217 | 47 | 3 | 1 | 213 | 1 | 217 | 7.46e-122 | 344 |
| MsG0280010794.01.T01 | AT2G33870 | 76.415 | 212 | 48 | 2 | 5 | 214 | 7 | 218 | 1.02e-119 | 339 |
| MsG0280010794.01.T01 | AT5G45750 | 77.619 | 210 | 45 | 2 | 5 | 213 | 7 | 215 | 1.29e-118 | 336 |
| MsG0280010794.01.T01 | AT4G18800 | 77.143 | 210 | 44 | 2 | 5 | 213 | 7 | 213 | 5.29e-117 | 332 |
| MsG0280010794.01.T01 | AT1G16920 | 73.460 | 211 | 54 | 2 | 4 | 213 | 6 | 215 | 8.28e-113 | 322 |
| MsG0280010794.01.T01 | AT1G06400 | 73.333 | 210 | 54 | 2 | 5 | 213 | 7 | 215 | 8.46e-113 | 322 |
| MsG0280010794.01.T01 | AT1G09630 | 65.728 | 213 | 70 | 2 | 5 | 215 | 6 | 217 | 1.20e-103 | 298 |
| MsG0280010794.01.T01 | AT1G07410 | 64.623 | 212 | 72 | 2 | 4 | 214 | 5 | 214 | 2.47e-100 | 290 |
| MsG0280010794.01.T01 | AT5G59150 | 64.186 | 215 | 71 | 3 | 4 | 214 | 5 | 217 | 9.69e-96 | 278 |
| MsG0280010794.01.T01 | AT3G46830 | 63.721 | 215 | 72 | 3 | 4 | 214 | 5 | 217 | 1.42e-95 | 278 |
| MsG0280010794.01.T01 | AT3G46830 | 63.721 | 215 | 72 | 3 | 4 | 214 | 5 | 217 | 1.42e-95 | 278 |
| MsG0280010794.01.T01 | AT5G47960 | 58.796 | 216 | 83 | 3 | 5 | 215 | 9 | 223 | 7.33e-88 | 258 |
| MsG0280010794.01.T01 | AT3G12160 | 57.209 | 215 | 87 | 2 | 2 | 212 | 6 | 219 | 1.52e-87 | 258 |
| MsG0280010794.01.T01 | AT4G39990 | 57.143 | 210 | 87 | 1 | 9 | 215 | 15 | 224 | 6.80e-85 | 251 |
| MsG0280010794.01.T01 | AT5G65270 | 55.708 | 219 | 91 | 2 | 2 | 214 | 8 | 226 | 1.69e-84 | 250 |
| MsG0280010794.01.T01 | AT5G47520 | 56.542 | 214 | 89 | 1 | 5 | 214 | 8 | 221 | 4.11e-82 | 244 |
| MsG0280010794.01.T01 | AT1G18200 | 53.812 | 223 | 86 | 3 | 5 | 212 | 7 | 227 | 6.47e-80 | 239 |
| MsG0280010794.01.T01 | AT1G05810 | 58.373 | 209 | 83 | 2 | 9 | 214 | 10 | 217 | 1.54e-78 | 234 |
| MsG0280010794.01.T01 | AT1G73640 | 55.556 | 207 | 85 | 2 | 5 | 204 | 7 | 213 | 3.92e-78 | 234 |
| MsG0280010794.01.T01 | AT1G05810 | 58.373 | 209 | 83 | 2 | 9 | 214 | 56 | 263 | 4.11e-78 | 235 |
| MsG0280010794.01.T01 | AT3G07410 | 57.407 | 216 | 89 | 2 | 1 | 213 | 1 | 216 | 5.05e-78 | 233 |
| MsG0280010794.01.T01 | AT2G31680 | 55.714 | 210 | 90 | 1 | 9 | 215 | 10 | 219 | 7.48e-78 | 233 |
| MsG0280010794.01.T01 | AT2G43130 | 58.173 | 208 | 80 | 2 | 9 | 213 | 10 | 213 | 8.53e-78 | 233 |
| MsG0280010794.01.T01 | AT1G01200 | 55.093 | 216 | 91 | 4 | 4 | 213 | 21 | 236 | 2.92e-77 | 232 |
| MsG0280010794.01.T01 | AT5G59150 | 58.434 | 166 | 63 | 3 | 53 | 214 | 3 | 166 | 5.75e-63 | 193 |
| MsG0280010794.01.T01 | AT4G17170 | 46.009 | 213 | 104 | 2 | 8 | 213 | 3 | 211 | 1.21e-61 | 191 |
| MsG0280010794.01.T01 | AT4G35860 | 44.976 | 209 | 112 | 1 | 8 | 213 | 3 | 211 | 2.23e-59 | 186 |
| MsG0280010794.01.T01 | AT4G17160 | 45.411 | 207 | 106 | 2 | 8 | 212 | 3 | 204 | 5.22e-58 | 182 |
| MsG0280010794.01.T01 | AT1G02130 | 46.445 | 211 | 105 | 3 | 4 | 214 | 1 | 203 | 9.89e-57 | 179 |
| MsG0280010794.01.T01 | AT4G17530 | 46.445 | 211 | 104 | 3 | 4 | 214 | 1 | 202 | 2.15e-55 | 175 |
| MsG0280010794.01.T01 | AT5G47200 | 45.116 | 215 | 101 | 3 | 4 | 214 | 1 | 202 | 4.37e-55 | 174 |
| MsG0280010794.01.T01 | AT3G11730 | 44.712 | 208 | 105 | 3 | 7 | 212 | 4 | 203 | 1.60e-53 | 171 |
| MsG0280010794.01.T01 | AT5G03520 | 45.755 | 212 | 102 | 4 | 7 | 213 | 11 | 214 | 6.92e-53 | 169 |
| MsG0280010794.01.T01 | AT3G46060 | 43.458 | 214 | 107 | 4 | 7 | 214 | 11 | 216 | 4.42e-51 | 165 |
| MsG0280010794.01.T01 | AT3G46060 | 43.458 | 214 | 107 | 4 | 7 | 214 | 11 | 216 | 4.42e-51 | 165 |
| MsG0280010794.01.T01 | AT3G46060 | 43.458 | 214 | 107 | 4 | 7 | 214 | 11 | 216 | 4.42e-51 | 165 |
| MsG0280010794.01.T01 | AT3G53610 | 42.523 | 214 | 109 | 4 | 7 | 214 | 11 | 216 | 1.21e-50 | 164 |
| MsG0280010794.01.T01 | AT3G53610 | 42.523 | 214 | 109 | 4 | 7 | 214 | 11 | 216 | 1.21e-50 | 164 |
| MsG0280010794.01.T01 | AT3G53610 | 42.523 | 214 | 109 | 4 | 7 | 214 | 11 | 216 | 1.21e-50 | 164 |
| MsG0280010794.01.T01 | AT3G09900 | 43.925 | 214 | 105 | 4 | 7 | 213 | 11 | 216 | 1.29e-50 | 164 |
| MsG0280010794.01.T01 | AT5G59840 | 42.523 | 214 | 109 | 4 | 7 | 214 | 11 | 216 | 5.13e-50 | 162 |
| MsG0280010794.01.T01 | AT5G45130 | 40.299 | 201 | 108 | 4 | 13 | 213 | 12 | 200 | 5.63e-47 | 154 |
| MsG0280010794.01.T01 | AT1G43890 | 47.701 | 174 | 88 | 3 | 6 | 177 | 8 | 180 | 4.53e-46 | 152 |
| MsG0280010794.01.T01 | AT1G43890 | 47.701 | 174 | 88 | 3 | 6 | 177 | 8 | 180 | 4.53e-46 | 152 |
| MsG0280010794.01.T01 | AT1G43890 | 47.701 | 174 | 88 | 3 | 6 | 177 | 8 | 180 | 4.53e-46 | 152 |
| MsG0280010794.01.T01 | AT3G54840 | 47.134 | 157 | 82 | 1 | 13 | 168 | 35 | 191 | 6.27e-46 | 151 |
| MsG0280010794.01.T01 | AT3G54840 | 46.795 | 156 | 82 | 1 | 14 | 168 | 2 | 157 | 1.71e-45 | 149 |
| MsG0280010794.01.T01 | AT5G45130 | 39.698 | 199 | 108 | 4 | 15 | 213 | 22 | 208 | 2.60e-45 | 150 |
| MsG0280010794.01.T01 | AT3G54840 | 47.403 | 154 | 80 | 1 | 13 | 165 | 35 | 188 | 3.65e-45 | 149 |
| MsG0280010794.01.T01 | AT4G19640 | 42.331 | 163 | 94 | 0 | 13 | 175 | 12 | 174 | 4.25e-45 | 149 |
| MsG0280010794.01.T01 | AT5G03530 | 44.231 | 208 | 107 | 5 | 8 | 213 | 10 | 210 | 2.50e-44 | 147 |
| MsG0280010794.01.T01 | AT5G03530 | 44.231 | 208 | 107 | 5 | 8 | 213 | 10 | 210 | 2.50e-44 | 147 |
| MsG0280010794.01.T01 | AT4G35860 | 41.463 | 164 | 93 | 1 | 53 | 213 | 2 | 165 | 2.00e-40 | 136 |
| MsG0280010794.01.T01 | AT5G64990 | 37.267 | 161 | 101 | 0 | 12 | 172 | 8 | 168 | 2.54e-38 | 132 |
| MsG0280010794.01.T01 | AT2G44610 | 33.333 | 216 | 112 | 3 | 12 | 213 | 10 | 207 | 5.77e-38 | 131 |
| MsG0280010794.01.T01 | AT2G22290 | 33.168 | 202 | 130 | 2 | 12 | 213 | 10 | 206 | 5.80e-38 | 131 |
| MsG0280010794.01.T01 | AT1G22740 | 42.515 | 167 | 85 | 5 | 11 | 168 | 8 | 172 | 9.82e-38 | 130 |
| MsG0280010794.01.T01 | AT5G03520 | 42.197 | 173 | 87 | 4 | 46 | 213 | 40 | 204 | 1.73e-37 | 130 |
| MsG0280010794.01.T01 | AT5G10260 | 36.943 | 157 | 99 | 0 | 12 | 168 | 10 | 166 | 1.01e-36 | 128 |
| MsG0280010794.01.T01 | AT4G39890 | 36.364 | 165 | 104 | 1 | 12 | 175 | 10 | 174 | 1.35e-36 | 127 |
| MsG0280010794.01.T01 | AT4G09720 | 39.394 | 165 | 93 | 3 | 11 | 168 | 8 | 172 | 8.90e-36 | 125 |
| MsG0280010794.01.T01 | AT5G64990 | 35.714 | 168 | 101 | 1 | 12 | 172 | 8 | 175 | 1.25e-35 | 125 |
| MsG0280010794.01.T01 | AT3G09910 | 42.781 | 187 | 100 | 4 | 8 | 192 | 10 | 191 | 3.47e-35 | 124 |
| MsG0280010794.01.T01 | AT3G09910 | 42.781 | 187 | 100 | 4 | 8 | 192 | 10 | 191 | 3.47e-35 | 124 |
| MsG0280010794.01.T01 | AT3G09910 | 42.781 | 187 | 100 | 4 | 8 | 192 | 10 | 191 | 3.47e-35 | 124 |
| MsG0280010794.01.T01 | AT4G19640 | 43.077 | 130 | 74 | 0 | 13 | 142 | 12 | 141 | 3.69e-35 | 122 |
| MsG0280010794.01.T01 | AT5G46025 | 58.491 | 106 | 43 | 1 | 73 | 177 | 6 | 111 | 3.86e-35 | 120 |
| MsG0280010794.01.T01 | AT2G21880 | 40.000 | 165 | 92 | 3 | 11 | 168 | 9 | 173 | 4.32e-35 | 124 |
| MsG0280010794.01.T01 | AT1G52280 | 40.237 | 169 | 91 | 5 | 11 | 171 | 8 | 174 | 1.02e-34 | 122 |
| MsG0280010794.01.T01 | AT4G19640 | 42.748 | 131 | 75 | 0 | 13 | 143 | 12 | 142 | 1.12e-34 | 122 |
| MsG0280010794.01.T01 | AT4G09720 | 38.824 | 170 | 92 | 4 | 11 | 168 | 8 | 177 | 3.34e-34 | 121 |
| MsG0280010794.01.T01 | AT3G18820 | 39.506 | 162 | 91 | 3 | 11 | 165 | 8 | 169 | 1.42e-33 | 119 |
| MsG0280010794.01.T01 | AT3G09910 | 43.114 | 167 | 92 | 3 | 8 | 172 | 10 | 175 | 1.87e-33 | 119 |
| MsG0280010794.01.T01 | AT3G09910 | 43.114 | 167 | 92 | 3 | 8 | 172 | 10 | 175 | 1.87e-33 | 119 |
| MsG0280010794.01.T01 | AT4G09720 | 37.500 | 176 | 92 | 4 | 11 | 168 | 8 | 183 | 3.55e-33 | 119 |
| MsG0280010794.01.T01 | AT3G16100 | 39.264 | 163 | 90 | 4 | 11 | 165 | 8 | 169 | 6.44e-33 | 118 |
| MsG0280010794.01.T01 | AT1G49300 | 37.725 | 167 | 97 | 3 | 11 | 170 | 8 | 174 | 1.97e-32 | 117 |
| MsG0280010794.01.T01 | AT1G49300 | 37.725 | 167 | 97 | 3 | 11 | 170 | 8 | 174 | 1.97e-32 | 117 |
| MsG0280010794.01.T01 | AT5G39620 | 38.415 | 164 | 94 | 3 | 12 | 168 | 6 | 169 | 3.40e-32 | 116 |
| MsG0280010794.01.T01 | AT2G21880 | 37.838 | 148 | 85 | 3 | 28 | 168 | 1 | 148 | 2.42e-26 | 100 |
| MsG0280010794.01.T01 | AT2G21880 | 37.838 | 148 | 85 | 3 | 28 | 168 | 1 | 148 | 2.42e-26 | 100 |
| MsG0280010794.01.T01 | AT4G09720 | 39.130 | 138 | 77 | 3 | 38 | 168 | 1 | 138 | 2.55e-25 | 97.4 |
| MsG0280010794.01.T01 | AT4G09720 | 39.130 | 138 | 77 | 3 | 38 | 168 | 1 | 138 | 2.55e-25 | 97.4 |
| MsG0280010794.01.T01 | AT4G09720 | 39.130 | 138 | 77 | 3 | 38 | 168 | 1 | 138 | 2.55e-25 | 97.4 |
| MsG0280010794.01.T01 | AT2G21880 | 35.152 | 165 | 92 | 4 | 11 | 168 | 9 | 165 | 3.70e-25 | 98.2 |
| MsG0280010794.01.T01 | AT5G20020 | 32.258 | 155 | 102 | 2 | 12 | 166 | 14 | 165 | 1.30e-23 | 94.4 |
| MsG0280010794.01.T01 | AT5G55190 | 32.258 | 155 | 102 | 2 | 12 | 166 | 14 | 165 | 1.46e-23 | 94.4 |
| MsG0280010794.01.T01 | AT5G20010 | 32.258 | 155 | 102 | 2 | 12 | 166 | 14 | 165 | 1.54e-23 | 94.4 |
| MsG0280010794.01.T01 | AT5G55080 | 30.435 | 161 | 109 | 2 | 12 | 172 | 14 | 171 | 2.75e-23 | 93.6 |
| MsG0280010794.01.T01 | AT2G44690 | 32.222 | 180 | 108 | 5 | 11 | 178 | 18 | 195 | 2.40e-19 | 82.8 |
| MsG0280010794.01.T01 | AT4G08190 | 50.704 | 71 | 32 | 1 | 95 | 165 | 60 | 127 | 6.70e-18 | 77.0 |
| MsG0280010794.01.T01 | AT4G35020 | 34.667 | 150 | 88 | 4 | 11 | 159 | 6 | 146 | 2.75e-17 | 77.0 |
| MsG0280010794.01.T01 | AT4G35020 | 34.667 | 150 | 88 | 4 | 11 | 159 | 6 | 146 | 2.75e-17 | 77.0 |
| MsG0280010794.01.T01 | AT4G35020 | 34.667 | 150 | 88 | 4 | 11 | 159 | 6 | 146 | 2.75e-17 | 77.0 |
| MsG0280010794.01.T01 | AT1G75840 | 37.500 | 120 | 72 | 3 | 11 | 129 | 6 | 123 | 1.78e-16 | 75.1 |
| MsG0280010794.01.T01 | AT1G20090 | 36.667 | 120 | 73 | 3 | 11 | 129 | 5 | 122 | 2.93e-16 | 74.3 |
| MsG0280010794.01.T01 | AT3G51300 | 38.136 | 118 | 70 | 3 | 13 | 129 | 8 | 123 | 3.60e-16 | 73.9 |
| MsG0280010794.01.T01 | AT2G17800 | 37.500 | 120 | 72 | 3 | 11 | 129 | 6 | 123 | 3.60e-16 | 73.9 |
| MsG0280010794.01.T01 | AT2G17800 | 37.500 | 120 | 72 | 3 | 11 | 129 | 6 | 123 | 3.60e-16 | 73.9 |
| MsG0280010794.01.T01 | AT4G35950 | 37.500 | 120 | 72 | 3 | 11 | 129 | 6 | 123 | 3.75e-16 | 73.9 |
| MsG0280010794.01.T01 | AT3G48040 | 31.737 | 167 | 100 | 5 | 11 | 165 | 8 | 172 | 5.07e-16 | 73.9 |
| MsG0280010794.01.T01 | AT4G28950 | 36.667 | 120 | 73 | 3 | 11 | 129 | 6 | 123 | 6.95e-16 | 73.6 |
| MsG0280010794.01.T01 | AT5G45970 | 36.667 | 120 | 73 | 3 | 11 | 129 | 6 | 123 | 8.39e-16 | 73.2 |
| MsG0280010794.01.T01 | AT5G62880 | 31.461 | 178 | 104 | 6 | 11 | 172 | 8 | 183 | 1.25e-15 | 73.2 |
| MsG0280010794.01.T01 | AT3G48040 | 36.667 | 120 | 73 | 3 | 11 | 129 | 8 | 125 | 2.56e-15 | 71.2 |
| MsG0280010794.01.T01 | AT5G62880 | 35.833 | 120 | 74 | 3 | 11 | 129 | 8 | 125 | 5.85e-15 | 70.9 |
| MsG0280010794.01.T01 | AT4G35020 | 36.066 | 122 | 75 | 3 | 13 | 133 | 8 | 127 | 3.39e-14 | 67.8 |
| MsG0280010794.01.T01 | AT4G35020 | 36.066 | 122 | 75 | 3 | 13 | 133 | 8 | 127 | 3.39e-14 | 67.8 |
Find 48 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGTAAATTCTCATCATTT+TGG | 0.200341 | 2:-75175683 | MsG0280010794.01.T01:three_prime_UTR |
| TTCAACGCCGATGGTGGATT+TGG | 0.266153 | 2:+75177386 | None:intergenic |
| TGGAGCTGTTGGCGCTTTGC+TGG | 0.307634 | 2:-75176134 | MsG0280010794.01.T01:CDS |
| CTGAATTGTAACAACAATAA+TGG | 0.324342 | 2:+75175524 | None:intergenic |
| GCTTGTTAAGGCTCAGATTT+GGG | 0.349305 | 2:-75177331 | MsG0280010794.01.T01:CDS |
| AGCTTGTTAAGGCTCAGATT+TGG | 0.356509 | 2:-75177332 | MsG0280010794.01.T01:CDS |
| GAAAGAAAACATATATTTCA+TGG | 0.359463 | 2:-75175948 | MsG0280010794.01.T01:CDS |
| TAATGACTCCCGCAACAAAT+AGG | 0.366578 | 2:+75175602 | None:intergenic |
| GATTCTTGATAAGCTTGTTA+AGG | 0.421134 | 2:-75177343 | MsG0280010794.01.T01:CDS |
| AAGGGAGAGACTATCAATAT+TGG | 0.429829 | 2:-75175806 | MsG0280010794.01.T01:CDS |
| CACTAGAAATGAATTCAACT+TGG | 0.437767 | 2:-75177412 | MsG0280010794.01.T01:CDS |
| AAATATCAAAACATTTCAAA+TGG | 0.447075 | 2:+75175657 | None:intergenic |
| AATTTGCTACTCGAAGTGTT+AGG | 0.449148 | 2:-75177365 | MsG0280010794.01.T01:CDS |
| AGAGAGACGTGTACTCTTGA+AGG | 0.454304 | 2:+75177615 | None:intergenic |
| TGGCTCTGCATCAGTGCCTA+AGG | 0.468622 | 2:-75175825 | MsG0280010794.01.T01:CDS |
| TATGTTGTAATCATGCTTGT+AGG | 0.477521 | 2:-75176034 | MsG0280010794.01.T01:CDS |
| TTGATCGGTGATTCTGGTGT+TGG | 0.493431 | 2:-75177459 | MsG0280010794.01.T01:CDS |
| AGTGAATCTAGATAAAAGAT+TGG | 0.496154 | 2:+75177431 | None:intergenic |
| TTCTTTCTCAGCAAATGTGG+TGG | 0.512980 | 2:+75175964 | None:intergenic |
| AGAGATGTATACATTAGAAG+AGG | 0.513980 | 2:-75175720 | MsG0280010794.01.T01:three_prime_UTR |
| AAGACTCTTGAGAAAGAGAA+TGG | 0.519287 | 2:-75175845 | MsG0280010794.01.T01:CDS |
| AGCAAATTCAACGCCGATGG+TGG | 0.527864 | 2:+75177380 | None:intergenic |
| GTAGGAGACTGTTACAGAAA+AGG | 0.528518 | 2:+75177646 | None:intergenic |
| GTTTCAGATGTTAAGAAGAG+TGG | 0.531135 | 2:-75175773 | MsG0280010794.01.T01:CDS |
| GGGATACTGCTGGTCAAGAA+AGG | 0.539209 | 2:-75177311 | MsG0280010794.01.T01:intron |
| ATAATGGATTCTCGAGATTG+AGG | 0.540347 | 2:+75175540 | None:intergenic |
| ATACGATTACTTGTTCAAGT+TGG | 0.541653 | 2:-75177484 | MsG0280010794.01.T01:CDS |
| AAATGTTGAGAGGTGGTTGA+AGG | 0.552257 | 2:-75176080 | MsG0280010794.01.T01:CDS |
| ATATTGATAGTCTCTCCCTT+AGG | 0.560011 | 2:+75175809 | None:intergenic |
| GCATACTACCGTGGAGCTGT+TGG | 0.560757 | 2:-75176145 | MsG0280010794.01.T01:CDS |
| GGTGGCTTCTTCCGTTGACA+CGG | 0.568498 | 2:+75175982 | None:intergenic |
| GCTCAGATTTGGGATACTGC+TGG | 0.571910 | 2:-75177321 | MsG0280010794.01.T01:CDS |
| TACAAGCATGATTACAACAT+AGG | 0.576438 | 2:+75176036 | None:intergenic |
| TGCACTAGAGTCGTTGAATG+TGG | 0.582071 | 2:-75175918 | MsG0280010794.01.T01:CDS |
| GAATGTGGACAATGCTTTCG+TGG | 0.585079 | 2:-75175903 | MsG0280010794.01.T01:CDS |
| GGCTCTGCATCAGTGCCTAA+GGG | 0.588553 | 2:-75175824 | MsG0280010794.01.T01:CDS |
| ACACTTGCAAGCCGTGTCAA+CGG | 0.594812 | 2:-75175993 | MsG0280010794.01.T01:CDS |
| CATTTGAAAATGTTGAGAGG+TGG | 0.614736 | 2:-75176087 | MsG0280010794.01.T01:CDS |
| AGTAGCAAATTCAACGCCGA+TGG | 0.615075 | 2:+75177377 | None:intergenic |
| TTGGAATCCAAATCCACCAT+CGG | 0.626401 | 2:-75177393 | MsG0280010794.01.T01:CDS |
| TGCTGGTGTACGACTCAACA+AGG | 0.627995 | 2:-75176117 | MsG0280010794.01.T01:CDS |
| AGACGTGTACTCTTGAAGGA+AGG | 0.645925 | 2:+75177619 | None:intergenic |
| ACAAATAGGAGAAAATTCGA+TGG | 0.655214 | 2:+75175616 | None:intergenic |
| GGAGACTGTTACAGAAAAGG+TGG | 0.655706 | 2:+75177649 | None:intergenic |
| GCAAAGCGCCAACAGCTCCA+CGG | 0.659685 | 2:+75176137 | None:intergenic |
| TGACATTTGAAAATGTTGAG+AGG | 0.673555 | 2:-75176090 | MsG0280010794.01.T01:CDS |
| CTCTTGAAGGAAGGAAACGT+AGG | 0.694276 | 2:+75177628 | None:intergenic |
| ATCACAAGTGCATACTACCG+TGG | 0.721157 | 2:-75176154 | MsG0280010794.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATCAAAACATTTCAAA+TGG | + | Chr2:75177528-75177547 | None:intergenic | 15.0% |
| !!! | TAAACTTGTTATATTGTTTT+TGG | - | Chr2:75176609-75176628 | MsG0280010794.01.T01:intron | 15.0% |
| !! | ATATTGGAAGAAATAAACAA+TGG | + | Chr2:75176412-75176431 | None:intergenic | 20.0% |
| !! | GAAAGAAAACATATATTTCA+TGG | - | Chr2:75177234-75177253 | MsG0280010794.01.T01:intron | 20.0% |
| !! | GTAATTTCTTCAATATATCA+AGG | - | Chr2:75176454-75176473 | MsG0280010794.01.T01:intron | 20.0% |
| !! | TCTTAATATTGTAGAGAATT+GGG | - | Chr2:75176337-75176356 | MsG0280010794.01.T01:intron | 20.0% |
| !! | TTCTTAATATTGTAGAGAAT+TGG | - | Chr2:75176336-75176355 | MsG0280010794.01.T01:intron | 20.0% |
| !!! | CAAATTTTGAAAAAGCTAAA+TGG | + | Chr2:75176435-75176454 | None:intergenic | 20.0% |
| !!! | TGAGATTATTTTAACTTTAG+AGG | + | Chr2:75176643-75176662 | None:intergenic | 20.0% |
| ! | AGAATGAAATTGAAGAGAAA+AGG | + | Chr2:75175902-75175921 | None:intergenic | 25.0% |
| ! | AGATCGAAAAATGAATGAAA+AGG | + | Chr2:75175626-75175645 | None:intergenic | 25.0% |
| ! | AGTGAATCTAGATAAAAGAT+TGG | + | Chr2:75175754-75175773 | None:intergenic | 25.0% |
| ! | GATCGAAAAATGAATGAAAA+GGG | + | Chr2:75175625-75175644 | None:intergenic | 25.0% |
| ! | GATTGATGAATTGAATTGAA+TGG | - | Chr2:75176089-75176108 | MsG0280010794.01.T01:CDS | 25.0% |
| ! | GTTCAATCTGTTGTTAAATA+AGG | - | Chr2:75176271-75176290 | MsG0280010794.01.T01:intron | 25.0% |
| ! | TGAAAAAGCTAAATGGATAT+TGG | + | Chr2:75176428-75176447 | None:intergenic | 25.0% |
| ! | TGATATGATCACAAAAACTA+TGG | - | Chr2:75176372-75176391 | MsG0280010794.01.T01:intron | 25.0% |
| !! | AAATGGAATTCTCATTTTAG+AGG | + | Chr2:75176885-75176904 | None:intergenic | 25.0% |
| !! | AAATTGAACTCTCATTTTAG+AGG | + | Chr2:75176768-75176787 | None:intergenic | 25.0% |
| !! | AGAGTAAATTCTCATCATTT+TGG | - | Chr2:75177499-75177518 | MsG0280010794.01.T01:CDS | 25.0% |
| !! | GAGTAAATTCTCATCATTTT+GGG | - | Chr2:75177500-75177519 | MsG0280010794.01.T01:CDS | 25.0% |
| !!! | GTATCTTAGAATTTGTTGTT+GGG | - | Chr2:75176188-75176207 | MsG0280010794.01.T01:intron | 25.0% |
| !!! | TACTCTTTCATTTTTAATGC+CGG | - | Chr2:75176247-75176266 | MsG0280010794.01.T01:intron | 25.0% |
| !!! | TACTTTTTTGCTTTTGATCT+TGG | - | Chr2:75176133-75176152 | MsG0280010794.01.T01:CDS | 25.0% |
| !!! | TGTATCTTAGAATTTGTTGT+TGG | - | Chr2:75176187-75176206 | MsG0280010794.01.T01:intron | 25.0% |
| AAAACGAGTTTACGAGATTT+AGG | + | Chr2:75176860-75176879 | None:intergenic | 30.0% | |
| AATGGAGTGAAAATGCAAAA+GGG | - | Chr2:75176107-75176126 | MsG0280010794.01.T01:CDS | 30.0% | |
| ACAAATAGGAGAAAATTCGA+TGG | + | Chr2:75177569-75177588 | None:intergenic | 30.0% | |
| AGACGGAAAAATTCTCTAAA+TGG | + | Chr2:75176902-75176921 | None:intergenic | 30.0% | |
| AGAGATGTATACATTAGAAG+AGG | - | Chr2:75177462-75177481 | MsG0280010794.01.T01:CDS | 30.0% | |
| ATACGATTACTTGTTCAAGT+TGG | - | Chr2:75175698-75175717 | MsG0280010794.01.T01:three_prime_UTR | 30.0% | |
| ATCATCATCATCATCATCAA+TGG | - | Chr2:75175659-75175678 | MsG0280010794.01.T01:three_prime_UTR | 30.0% | |
| ATGATCACAAAAACTATGGA+TGG | - | Chr2:75176376-75176395 | MsG0280010794.01.T01:intron | 30.0% | |
| CACTAGAAATGAATTCAACT+TGG | - | Chr2:75175770-75175789 | MsG0280010794.01.T01:CDS | 30.0% | |
| GGAAAAAGTAAGTGCATATT+TGG | + | Chr2:75176747-75176766 | None:intergenic | 30.0% | |
| GGAAGAAATAAACAATGGTT+AGG | + | Chr2:75176407-75176426 | None:intergenic | 30.0% | |
| TAAGTGCATATTTGGTATCA+CGG | + | Chr2:75176739-75176758 | None:intergenic | 30.0% | |
| TACAAGCATGATTACAACAT+AGG | + | Chr2:75177149-75177168 | None:intergenic | 30.0% | |
| TATGTTGTAATCATGCTTGT+AGG | - | Chr2:75177148-75177167 | MsG0280010794.01.T01:intron | 30.0% | |
| TCATCATCATCATCATCAAT+GGG | - | Chr2:75175660-75175679 | MsG0280010794.01.T01:three_prime_UTR | 30.0% | |
| TGACATTTGAAAATGTTGAG+AGG | - | Chr2:75177092-75177111 | MsG0280010794.01.T01:intron | 30.0% | |
| TGTAAGTATCACATTGTAGA+CGG | + | Chr2:75176919-75176938 | None:intergenic | 30.0% | |
| !! | AATTTTCTCCTATTTGTTGC+GGG | - | Chr2:75177572-75177591 | MsG0280010794.01.T01:five_prime_UTR | 30.0% |
| !! | ACTCTTTCATTTTTAATGCC+GGG | - | Chr2:75176248-75176267 | MsG0280010794.01.T01:intron | 30.0% |
| !! | GAATTTTCTCCTATTTGTTG+CGG | - | Chr2:75177571-75177590 | MsG0280010794.01.T01:five_prime_UTR | 30.0% |
| !! | GACTTTTAGAAGAGAAACTA+TGG | + | Chr2:75176575-75176594 | None:intergenic | 30.0% |
| !! | GATTCTTGATAAGCTTGTTA+AGG | - | Chr2:75175839-75175858 | MsG0280010794.01.T01:CDS | 30.0% |
| !! | GGGTTTTGATCTTAATGTTT+AGG | - | Chr2:75175983-75176002 | MsG0280010794.01.T01:CDS | 30.0% |
| !! | GTGTCTGATAATTTGTTGTT+GGG | - | Chr2:75176031-75176050 | MsG0280010794.01.T01:CDS | 30.0% |
| !! | TGTGTCTGATAATTTGTTGT+TGG | - | Chr2:75176030-75176049 | MsG0280010794.01.T01:CDS | 30.0% |
| !!! | AGAGTTTTAGAAGACAATCT+AGG | + | Chr2:75176510-75176529 | None:intergenic | 30.0% |
| !!! | AGTGTGTTTTTTTGTGGTTT+TGG | - | Chr2:75175962-75175981 | MsG0280010794.01.T01:CDS | 30.0% |
| !!! | AGTTTTAGAAGACAATCTAG+GGG | + | Chr2:75176508-75176527 | None:intergenic | 30.0% |
| !!! | GAGTTTTAGAAGACAATCTA+GGG | + | Chr2:75176509-75176528 | None:intergenic | 30.0% |
| !!! | GCAAAAAGTGTGTTTTTTTG+TGG | - | Chr2:75175956-75175975 | MsG0280010794.01.T01:CDS | 30.0% |
| !!! | GTGTGTTTTTTTGTGGTTTT+GGG | - | Chr2:75175963-75175982 | MsG0280010794.01.T01:CDS | 30.0% |
| !!! | TTGTTCAAGTTGGTTTTGAT+CGG | - | Chr2:75175708-75175727 | MsG0280010794.01.T01:three_prime_UTR | 30.0% |
| AAGACACTGATCATAAACAG+AGG | - | Chr2:75176161-75176180 | MsG0280010794.01.T01:CDS | 35.0% | |
| AAGACTCTTGAGAAAGAGAA+TGG | - | Chr2:75177337-75177356 | MsG0280010794.01.T01:CDS | 35.0% | |
| AAGGGAGAGACTATCAATAT+TGG | - | Chr2:75177376-75177395 | MsG0280010794.01.T01:CDS | 35.0% | |
| AATGAGAGACTACAAGATTC+AGG | + | Chr2:75176980-75176999 | None:intergenic | 35.0% | |
| ATCACAAAAACTATGGATGG+TGG | - | Chr2:75176379-75176398 | MsG0280010794.01.T01:intron | 35.0% | |
| CATTTGAAAATGTTGAGAGG+TGG | - | Chr2:75177095-75177114 | MsG0280010794.01.T01:intron | 35.0% | |
| GAAGAGAAACTATGGCTAAT+TGG | + | Chr2:75176567-75176586 | None:intergenic | 35.0% | |
| GAATGGAGTGAAAATGCAAA+AGG | - | Chr2:75176106-75176125 | MsG0280010794.01.T01:CDS | 35.0% | |
| GTTTCAGATGTTAAGAAGAG+TGG | - | Chr2:75177409-75177428 | MsG0280010794.01.T01:CDS | 35.0% | |
| TTTAACAACAGATTGAACCC+CGG | + | Chr2:75176269-75176288 | None:intergenic | 35.0% | |
| ! | ATATTGATAGTCTCTCCCTT+AGG | + | Chr2:75177376-75177395 | None:intergenic | 35.0% |
| ! | GTTTTCTTTCTCAGCAAATG+TGG | + | Chr2:75177224-75177243 | None:intergenic | 35.0% |
| !! | AATTTGCTACTCGAAGTGTT+AGG | - | Chr2:75175817-75175836 | MsG0280010794.01.T01:CDS | 35.0% |
| !! | AATTTGTTGTTGGGTAGAGA+AGG | - | Chr2:75176040-75176059 | MsG0280010794.01.T01:CDS | 35.0% |
| !! | ATAATGGATTCTCGAGATTG+AGG | + | Chr2:75177645-75177664 | None:intergenic | 35.0% |
| !! | CTCTTTCATTTTTAATGCCG+GGG | - | Chr2:75176249-75176268 | MsG0280010794.01.T01:intron | 35.0% |
| !! | GTTTTCGTTTGCTGAGATAT+AGG | - | Chr2:75177614-75177633 | MsG0280010794.01.T01:five_prime_UTR | 35.0% |
| AAATGTTGAGAGGTGGTTGA+AGG | - | Chr2:75177102-75177121 | MsG0280010794.01.T01:intron | 40.0% | |
| GAAGACAATCTAGGGGTAAT+AGG | + | Chr2:75176501-75176520 | None:intergenic | 40.0% | |
| GTAGGAGACTGTTACAGAAA+AGG | + | Chr2:75175539-75175558 | None:intergenic | 40.0% | |
| GTTGGGTAGAGAAGGAATTT+GGG | - | Chr2:75176205-75176224 | MsG0280010794.01.T01:intron | 40.0% | |
| GTTGGGTAGAGAATGAATTG+AGG | - | Chr2:75176048-75176067 | MsG0280010794.01.T01:CDS | 40.0% | |
| TAATGACTCCCGCAACAAAT+AGG | + | Chr2:75177583-75177602 | None:intergenic | 40.0% | |
| TGTTGGGTAGAGAAGGAATT+TGG | - | Chr2:75176204-75176223 | MsG0280010794.01.T01:intron | 40.0% | |
| TTCTTTCTCAGCAAATGTGG+TGG | + | Chr2:75177221-75177240 | None:intergenic | 40.0% | |
| TTGGAATCCAAATCCACCAT+CGG | - | Chr2:75175789-75175808 | MsG0280010794.01.T01:CDS | 40.0% | |
| ! | GCTTGTTAAGGCTCAGATTT+GGG | - | Chr2:75175851-75175870 | MsG0280010794.01.T01:CDS | 40.0% |
| !! | AGCTTGTTAAGGCTCAGATT+TGG | - | Chr2:75175850-75175869 | MsG0280010794.01.T01:CDS | 40.0% |
| !!! | TTGGTTTTGATCGGTGATTC+TGG | - | Chr2:75175717-75175736 | MsG0280010794.01.T01:three_prime_UTR | 40.0% |
| AAGATGTCCTGCTGCATGTT+TGG | - | Chr2:75176682-75176701 | MsG0280010794.01.T01:intron | 45.0% | |
| AGACGTGTACTCTTGAAGGA+AGG | + | Chr2:75175566-75175585 | None:intergenic | 45.0% | |
| AGAGAGACGTGTACTCTTGA+AGG | + | Chr2:75175570-75175589 | None:intergenic | 45.0% | |
| AGTAGCAAATTCAACGCCGA+TGG | + | Chr2:75175808-75175827 | None:intergenic | 45.0% | |
| ATCACAAGTGCATACTACCG+TGG | - | Chr2:75177028-75177047 | MsG0280010794.01.T01:intron | 45.0% | |
| CTCTTGAAGGAAGGAAACGT+AGG | + | Chr2:75175557-75175576 | None:intergenic | 45.0% | |
| GAATGTGGACAATGCTTTCG+TGG | - | Chr2:75177279-75177298 | MsG0280010794.01.T01:intron | 45.0% | |
| TGCACTAGAGTCGTTGAATG+TGG | - | Chr2:75177264-75177283 | MsG0280010794.01.T01:intron | 45.0% | |
| TGTGATACCAAACATGCAGC+AGG | + | Chr2:75176692-75176711 | None:intergenic | 45.0% | |
| TTGATCGGTGATTCTGGTGT+TGG | - | Chr2:75175723-75175742 | MsG0280010794.01.T01:three_prime_UTR | 45.0% | |
| ACACTTGCAAGCCGTGTCAA+CGG | - | Chr2:75177189-75177208 | MsG0280010794.01.T01:intron | 50.0% | |
| AGCAAATTCAACGCCGATGG+TGG | + | Chr2:75175805-75175824 | None:intergenic | 50.0% | |
| GGGATACTGCTGGTCAAGAA+AGG | - | Chr2:75175871-75175890 | MsG0280010794.01.T01:CDS | 50.0% | |
| TGCTGGTGTACGACTCAACA+AGG | - | Chr2:75177065-75177084 | MsG0280010794.01.T01:intron | 50.0% | |
| ! | GCTCAGATTTGGGATACTGC+TGG | - | Chr2:75175861-75175880 | MsG0280010794.01.T01:CDS | 50.0% |
| !! | TTCAACGCCGATGGTGGATT+TGG | + | Chr2:75175799-75175818 | None:intergenic | 50.0% |
| GCATACTACCGTGGAGCTGT+TGG | - | Chr2:75177037-75177056 | MsG0280010794.01.T01:intron | 55.0% | |
| GGCTCTGCATCAGTGCCTAA+GGG | - | Chr2:75177358-75177377 | MsG0280010794.01.T01:CDS | 55.0% | |
| GGTGGCTTCTTCCGTTGACA+CGG | + | Chr2:75177203-75177222 | None:intergenic | 55.0% | |
| ! | TGGCTCTGCATCAGTGCCTA+AGG | - | Chr2:75177357-75177376 | MsG0280010794.01.T01:CDS | 55.0% |
| TGGAGCTGTTGGCGCTTTGC+TGG | - | Chr2:75177048-75177067 | MsG0280010794.01.T01:intron | 60.0% | |
| ! | GCAAAGCGCCAACAGCTCCA+CGG | + | Chr2:75177048-75177067 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 75175534 | 75177670 | 75175534 | ID=MsG0280010794.01;Name=MsG0280010794.01 |
| Chr2 | mRNA | 75175534 | 75177670 | 75175534 | ID=MsG0280010794.01.T01;Parent=MsG0280010794.01;Name=MsG0280010794.01.T01;_AED=0.49;_eAED=0.49;_QI=144|1|1|1|1|1|2|220|215 |
| Chr2 | exon | 75175534 | 75176186 | 75175534 | ID=MsG0280010794.01.T01:exon:11081;Parent=MsG0280010794.01.T01 |
| Chr2 | exon | 75177312 | 75177670 | 75177312 | ID=MsG0280010794.01.T01:exon:11080;Parent=MsG0280010794.01.T01 |
| Chr2 | five_prime_UTR | 75177527 | 75177670 | 75177527 | ID=MsG0280010794.01.T01:five_prime_utr;Parent=MsG0280010794.01.T01 |
| Chr2 | CDS | 75177312 | 75177526 | 75177312 | ID=MsG0280010794.01.T01:cds;Parent=MsG0280010794.01.T01 |
| Chr2 | CDS | 75175754 | 75176186 | 75175754 | ID=MsG0280010794.01.T01:cds;Parent=MsG0280010794.01.T01 |
| Chr2 | three_prime_UTR | 75175534 | 75175753 | 75175534 | ID=MsG0280010794.01.T01:three_prime_utr;Parent=MsG0280010794.01.T01 |
| Gene Sequence |
| Protein sequence |
