AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027046.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027046.01.T01 MTR_0049s0110 65.931 408 41 3 17 326 10 417 7.46e-171 481
MsG0580027046.01.T01 MTR_0049s0110 63.284 335 33 4 17 264 10 341 4.20e-129 372
MsG0580027046.01.T01 MTR_0049s0110 74.131 259 22 2 17 230 10 268 4.61e-125 360
MsG0580027046.01.T01 MTR_0049s0110 74.131 259 22 2 17 230 10 268 6.28e-125 362
MsG0580027046.01.T01 MTR_1g011430 33.151 365 177 9 16 326 8 359 2.91e-47 164
MsG0580027046.01.T01 MTR_1g021825 30.732 410 182 9 16 326 18 424 1.33e-46 163
MsG0580027046.01.T01 MTR_1g021825 30.657 411 181 9 16 326 89 495 4.50e-44 158
MsG0580027046.01.T01 MTR_0227s0010 37.132 272 94 5 1 223 1 244 8.11e-39 140
MsG0580027046.01.T01 MTR_5g038430 39.113 248 95 5 1 194 82 327 6.01e-38 141
MsG0580027046.01.T01 MTR_2g091145 27.130 446 191 11 4 330 10 440 6.57e-38 140
MsG0580027046.01.T01 MTR_2g047872 28.571 420 190 10 12 326 21 435 2.02e-34 131
MsG0580027046.01.T01 MTR_1g011400 30.425 424 182 16 11 326 4 422 1.65e-33 128
MsG0580027046.01.T01 MTR_2g047858 33.457 269 121 6 12 223 113 380 8.27e-33 128
MsG0580027046.01.T01 MTR_1g013580 28.537 417 192 12 14 327 18 431 8.96e-33 126
MsG0580027046.01.T01 MTR_1g011410 33.977 259 119 4 16 222 316 574 2.35e-31 124
MsG0580027046.01.T01 MTR_1g011410 32.766 235 125 5 16 222 8 237 1.22e-25 108
MsG0580027046.01.T01 MTR_1g021820 27.136 398 193 9 16 319 29 423 1.51e-29 117
MsG0580027046.01.T01 MTR_1g016310 31.159 276 131 8 5 222 11 285 6.99e-29 114
MsG0580027046.01.T01 MTR_8g095590 36.508 252 71 8 1 195 1 220 1.87e-28 115
MsG0580027046.01.T01 MTR_5g040850 27.414 321 173 7 63 330 107 420 3.26e-28 114
MsG0580027046.01.T01 MTR_1g016310 31.321 265 124 7 16 222 21 285 4.30e-28 113
MsG0580027046.01.T01 MTR_4g057725 30.258 271 128 6 14 226 21 288 1.58e-27 112
MsG0580027046.01.T01 MTR_1g014450 27.098 417 193 15 16 326 17 428 1.04e-26 109
MsG0580027046.01.T01 MTR_1g013840 31.058 293 139 6 1 230 36 328 1.20e-26 110
MsG0580027046.01.T01 MTR_2g047852 36.041 197 101 7 12 184 7 202 1.88e-26 104
MsG0580027046.01.T01 MTR_1g016340 30.824 279 131 6 5 222 11 288 1.93e-26 109
MsG0580027046.01.T01 MTR_1g016340 30.824 279 131 6 5 222 6 283 1.99e-26 108
MsG0580027046.01.T01 MTR_2g047848 31.203 266 125 8 16 223 8 273 5.29e-26 107
MsG0580027046.01.T01 MTR_1g013560 25.118 422 203 12 14 326 18 435 1.94e-24 103
MsG0580027046.01.T01 MTR_1g013560 27.239 268 135 6 14 222 18 284 5.46e-22 95.5
MsG0580027046.01.T01 MTR_7g090750 26.651 439 185 14 1 323 1 418 1.34e-20 92.4
MsG0580027046.01.T01 MTR_1g028860 36.585 123 77 1 63 184 91 213 9.04e-20 88.2
MsG0580027046.01.T01 MTR_1g013630 32.995 197 79 4 17 160 41 237 2.91e-19 88.2
MsG0580027046.01.T01 MTR_1g013610 26.515 264 123 5 14 222 6 253 2.12e-18 85.5
MsG0580027046.01.T01 MTR_5g039950 27.344 256 144 9 6 219 14 269 1.24e-14 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027046.01.T01 AT1G13570 42.271 414 139 7 11 326 2 413 5.05e-89 273
MsG0580027046.01.T01 AT1G13570 42.271 414 139 7 11 326 2 413 5.05e-89 273
MsG0580027046.01.T01 AT1G13570 51.311 267 82 4 11 230 2 267 7.66e-75 233

Find 71 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAAATGATCTTAAAGATT+TGG 0.264764 5:+51821899 MsG0580027046.01.T01:CDS
TATTTCAAGTTGCCCTCTAT+TGG 0.278991 5:+51822106 MsG0580027046.01.T01:CDS
ATAAGGCTCTCAATCGCTTC+AGG 0.295190 5:-51822086 None:intergenic
TAAAGATTTGGATCTTGAAT+TGG 0.299254 5:+51821911 MsG0580027046.01.T01:CDS
TTTGGATGTTCAATTGAAAA+TGG 0.313508 5:+51824057 MsG0580027046.01.T01:CDS
CATTCCTGCTATGTATGATT+TGG 0.353010 5:+51824039 MsG0580027046.01.T01:CDS
CTCAAGTACTTGTGCCTTGA+AGG 0.356940 5:+51822185 MsG0580027046.01.T01:CDS
ATAGAGGGCAACTTGAAATA+AGG 0.361573 5:-51822103 None:intergenic
TTTCCTTGAATTCGCCTTCA+AGG 0.370278 5:-51822199 None:intergenic
TGCCCTTCGGATTCTATACT+TGG 0.376171 5:+51823910 MsG0580027046.01.T01:CDS
AGGCACAAGTACTTGAGGTT+TGG 0.379396 5:-51822179 None:intergenic
GCTTGGCTGTTCACCTATGC+TGG 0.392740 5:+51824003 MsG0580027046.01.T01:CDS
AAAGATTTGGATCTTGAATT+GGG 0.397903 5:+51821912 MsG0580027046.01.T01:CDS
TCTTGTAGATACTCCACTCT+TGG 0.415353 5:+51822226 MsG0580027046.01.T01:CDS
ACCAATGGGATCACCACAAT+TGG 0.428144 5:-51818741 None:intergenic
GTGCCTTGAAGGCGAATTCA+AGG 0.442000 5:+51822196 MsG0580027046.01.T01:CDS
ATTCTAGAAACCTCGGGGCC+AGG 0.444522 5:-51818934 None:intergenic
CCTAACCTCGAGAGACTTGT+TGG 0.444823 5:+51822335 MsG0580027046.01.T01:CDS
TTCTAGAAACCTCGGGGCCA+GGG 0.457743 5:-51818933 None:intergenic
ACCACAATTGGCCTTCTTCG+TGG 0.459727 5:-51818729 None:intergenic
TTACCAAGTAATTTCATCAA+TGG 0.464116 5:+51818776 MsG0580027046.01.T01:CDS
CCAACAAGTCTCTCGAGGTT+AGG 0.470137 5:-51822335 None:intergenic
AGCGATAAGTTCTCCAATAG+AGG 0.480239 5:-51822119 None:intergenic
GTGATAATTCTAGAAACCTC+GGG 0.481323 5:-51818940 None:intergenic
TTGTGAGAAATTGACTCGAT+TGG 0.483936 5:+51821974 MsG0580027046.01.T01:CDS
CACTAGTCCTCACTAGGTCT+CGG 0.486973 5:-51818820 None:intergenic
CTCGGGCGTTCAAGTGGTCT+AGG 0.489253 5:-51818802 None:intergenic
CTTTAAGATCATTTCTCGAA+AGG 0.498052 5:-51821893 None:intergenic
AAACCTGCATATACAGCATA+CGG 0.501448 5:-51823869 None:intergenic
TAAGGCTCTCAATCGCTTCA+GGG 0.510398 5:-51822085 None:intergenic
GCCCCGTATGCTGTATATGC+AGG 0.512175 5:+51823866 MsG0580027046.01.T01:CDS
AGAAAATTTATTTCATCCGC+GGG 0.514088 5:+51824120 MsG0580027046.01.T01:CDS
AAGTCACTGATTCGACCAAT+GGG 0.516893 5:-51818755 None:intergenic
ATGCCATTGATGAAATTACT+TGG 0.517497 5:-51818779 None:intergenic
TTGGATCTTGAATTGGGAGA+AGG 0.523444 5:+51821918 MsG0580027046.01.T01:CDS
GATGACTCTGTCCACGAAGA+AGG 0.529912 5:+51818718 None:intergenic
GAAAATCCCTTAAAACTAGC+AGG 0.533034 5:-51822023 None:intergenic
ACTTGGTCAGCTTAAACTTG+TGG 0.539840 5:+51823927 MsG0580027046.01.T01:CDS
CTAGGTCTCGGGCGTTCAAG+TGG 0.543973 5:-51818808 None:intergenic
TAAGTCACTGATTCGACCAA+TGG 0.545938 5:-51818756 None:intergenic
TTCTTCGTGGACAGAGTCAT+CGG 0.548441 5:-51818716 None:intergenic
ACTAGTCCTCACTAGGTCTC+GGG 0.549115 5:-51818819 None:intergenic
CTAGTGTTCTGTCTAGAAAG+TGG 0.555232 5:+51818837 MsG0580027046.01.T01:CDS
ATACTCATTGTCTCCAGCAT+AGG 0.556521 5:-51824016 None:intergenic
CAGAAAATTTATTTCATCCG+CGG 0.564425 5:+51824119 MsG0580027046.01.T01:CDS
ACATCCAAATCATACATAGC+AGG 0.566497 5:-51824043 None:intergenic
CTTCAAGGCACAAGTACTTG+AGG 0.567741 5:-51822184 None:intergenic
AACCTGCATATACAGCATAC+GGG 0.577225 5:-51823868 None:intergenic
TGTGATAATTCTAGAAACCT+CGG 0.578942 5:-51818941 None:intergenic
ACAGATAATTCAACCAAGAG+TGG 0.588190 5:-51822239 None:intergenic
GTATATGACTGACGAGCACA+TGG 0.598121 5:+51822268 MsG0580027046.01.T01:CDS
TCCACGAAGAAGGCCAATTG+TGG 0.599520 5:+51818728 MsG0580027046.01.T01:CDS
GCCAATTGTGGTGATCCCAT+TGG 0.602145 5:+51818740 MsG0580027046.01.T01:CDS
TCAAAATGTTTAATCTCCCG+CGG 0.610253 5:-51824136 None:intergenic
GGATGTTCAATTGAAAATGG+TGG 0.614498 5:+51824060 MsG0580027046.01.T01:CDS
CTGATAAATTCGATCTCGTG+TGG 0.615498 5:-51823974 None:intergenic
AAGGCTCTCAATCGCTTCAG+GGG 0.619783 5:-51822084 None:intergenic
GCGATAAGTTCTCCAATAGA+GGG 0.623534 5:-51822118 None:intergenic
ACAGAACACTAGTCCTCACT+AGG 0.632468 5:-51818826 None:intergenic
TACGAGGATCTCGAAGACCC+TGG 0.635145 5:+51818916 MsG0580027046.01.T01:CDS
TGACCAAGTATAGAATCCGA+AGG 0.648564 5:-51823913 None:intergenic
TGAACGCCCGAGACCTAGTG+AGG 0.652385 5:+51818813 MsG0580027046.01.T01:CDS
TGGTCTTATTGACTTCACAA+AGG 0.664654 5:+51822355 MsG0580027046.01.T01:CDS
TAAGACCAACAAGTCTCTCG+AGG 0.668237 5:-51822340 None:intergenic
GACCAAGTATAGAATCCGAA+GGG 0.669544 5:-51823912 None:intergenic
TCTCGAAGACCCTGGCCCCG+AGG 0.674226 5:+51818924 MsG0580027046.01.T01:CDS
GTGTTCTGTCTAGAAAGTGG+AGG 0.680870 5:+51818840 MsG0580027046.01.T01:CDS
ACCTGCATATACAGCATACG+GGG 0.706094 5:-51823867 None:intergenic
TGGAAGTTGACAGAAATGAG+CGG 0.717007 5:+51823947 MsG0580027046.01.T01:CDS
TGATAATTCTAGAAACCTCG+GGG 0.720271 5:-51818939 None:intergenic
AATCCCTTAAAACTAGCAGG+CGG 0.721464 5:-51822020 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTAAAAATTGAAATTAG+GGG + Chr5:51820268-51820287 MsG0580027046.01.T01:intron 10.0%
!! ATATTTGTATATTATAAAAG+AGG - Chr5:51819768-51819787 None:intergenic 10.0%
!! ATGTAAAAATATAGTTATAA+TGG + Chr5:51822481-51822500 MsG0580027046.01.T01:intron 10.0%
!! CAAATTTAAAAATTGAAATT+AGG + Chr5:51820266-51820285 MsG0580027046.01.T01:intron 10.0%
!! TATTTGTATATTATAAAAGA+GGG - Chr5:51819767-51819786 None:intergenic 10.0%
!!! AAATTGATTTTTATTTTTAG+GGG - Chr5:51823029-51823048 None:intergenic 10.0%
!!! CTAATTTCAATTTTTAAATT+TGG - Chr5:51820268-51820287 None:intergenic 10.0%
!!! GAAATTGATTTTTATTTTTA+GGG - Chr5:51823030-51823049 None:intergenic 10.0%
!!! TAATTTTTTGGATATTTATT+AGG + Chr5:51820358-51820377 MsG0580027046.01.T01:intron 10.0%
!!! TGAAATTGATTTTTATTTTT+AGG - Chr5:51823031-51823050 None:intergenic 10.0%
!! AAAATGAATTAAAAATGATG+AGG + Chr5:51819914-51819933 MsG0580027046.01.T01:intron 15.0%
!! AAATTAAAAAGTTAATAGAG+TGG - Chr5:51820670-51820689 None:intergenic 15.0%
!! ACATTAAAAAAGTTAATGTA+AGG + Chr5:51822517-51822536 MsG0580027046.01.T01:intron 15.0%
!! ATTTGTATATTATAAAAGAG+GGG - Chr5:51819766-51819785 None:intergenic 15.0%
!! CAAAAAATATCTAAATTTGT+CGG - Chr5:51822603-51822622 None:intergenic 15.0%
!! GTATATCTATTTATTTAAGT+TGG + Chr5:51822650-51822669 MsG0580027046.01.T01:intron 15.0%
!!! ATAAAAAATGGATGATTTTT+CGG + Chr5:51821564-51821583 MsG0580027046.01.T01:intron 15.0%
!!! ATATATTTTCTTACTTGTTA+AGG + Chr5:51822424-51822443 MsG0580027046.01.T01:intron 15.0%
!!! TATATTTTCTTACTTGTTAA+GGG + Chr5:51822425-51822444 MsG0580027046.01.T01:intron 15.0%
!!! TGTAATTTCAAAAATTTTGA+GGG + Chr5:51820296-51820315 MsG0580027046.01.T01:intron 15.0%
!!! TTAAACATTTTGAATTTTGA+AGG + Chr5:51824146-51824165 MsG0580027046.01.T01:CDS 15.0%
!!! TTGTAATTTCAAAAATTTTG+AGG + Chr5:51820295-51820314 MsG0580027046.01.T01:intron 15.0%
!! AATAAATGAAGATATGTAAG+AGG + Chr5:51822885-51822904 MsG0580027046.01.T01:intron 20.0%
!! ACAGAATTATGATCTTTAAT+TGG - Chr5:51821225-51821244 None:intergenic 20.0%
!! ACTGCACATAAAAAATTATT+TGG + Chr5:51823454-51823473 MsG0580027046.01.T01:intron 20.0%
!! ATTATGATCTTTAATTGGAT+TGG - Chr5:51821220-51821239 None:intergenic 20.0%
!! CATTTATTTAATGATGTATG+TGG - Chr5:51820809-51820828 None:intergenic 20.0%
!! TACATCATTAAATGAATGTA+TGG + Chr5:51820782-51820801 MsG0580027046.01.T01:intron 20.0%
!! TATAGTTATATAAGATACCA+AGG - Chr5:51823296-51823315 None:intergenic 20.0%
!! TATTAACGATATTAGTGTTT+CGG + Chr5:51819272-51819291 MsG0580027046.01.T01:intron 20.0%
!! TCATTCAATAATGATGTATT+TGG + Chr5:51820970-51820989 MsG0580027046.01.T01:intron 20.0%
!! TTAAAATAACAACTGAACTA+TGG - Chr5:51823759-51823778 None:intergenic 20.0%
!! TTAAATGTGTATAGATTAGT+TGG + Chr5:51822558-51822577 MsG0580027046.01.T01:intron 20.0%
!! TTAGTAATTTCAAATCAACA+AGG + Chr5:51823148-51823167 MsG0580027046.01.T01:intron 20.0%
!! TTATGATCTTTAATTGGATT+GGG - Chr5:51821219-51821238 None:intergenic 20.0%
!! TTATGTGATTTATAGATCTT+AGG + Chr5:51821464-51821483 MsG0580027046.01.T01:intron 20.0%
!! TTTAAAAGAACTTCACATTT+CGG + Chr5:51823713-51823732 MsG0580027046.01.T01:intron 20.0%
!!! AAAGTTAATGTAAGGTTTTT+TGG + Chr5:51822525-51822544 MsG0580027046.01.T01:intron 20.0%
!!! AAATTTTTGAAAAACTTGAG+GGG + Chr5:51820328-51820347 MsG0580027046.01.T01:intron 20.0%
!!! AATTTGCTTATATTTTGACA+CGG - Chr5:51820709-51820728 None:intergenic 20.0%
!!! ACAATTTGAAACTTATGAAT+TGG - Chr5:51821826-51821845 None:intergenic 20.0%
!!! ATGTGAAGTTCTTTTAAATT+AGG - Chr5:51823711-51823730 None:intergenic 20.0%
!!! GAAATTTTTGAAAAACTTGA+GGG + Chr5:51820327-51820346 MsG0580027046.01.T01:intron 20.0%
!!! GTAATTTCAAAAATTTTGAG+GGG + Chr5:51820297-51820316 MsG0580027046.01.T01:intron 20.0%
!!! GTTTGTTGATTTTATAAAAG+TGG - Chr5:51822945-51822964 None:intergenic 20.0%
!!! TAAAAAATGGATGATTTTTC+GGG + Chr5:51821565-51821584 MsG0580027046.01.T01:intron 20.0%
!!! TATAAGCAAATTCACTTTTT+AGG + Chr5:51820717-51820736 MsG0580027046.01.T01:intron 20.0%
!!! TGAAATTTTTGAAAAACTTG+AGG + Chr5:51820326-51820345 MsG0580027046.01.T01:intron 20.0%
!!! TTAGGATGAAGAAATTTTTT+AGG - Chr5:51822827-51822846 None:intergenic 20.0%
!!! TTATTTTCAGAAAATCCAAA+CGG + Chr5:51823316-51823335 MsG0580027046.01.T01:intron 20.0%
!!! TTTCAAAAGAGTATTTTCAT+TGG - Chr5:51819252-51819271 None:intergenic 20.0%
! AAAATTCTTAAGAGCAATGT+GGG - Chr5:51819301-51819320 None:intergenic 25.0%
! AAAGATTTGGATCTTGAATT+GGG + Chr5:51821912-51821931 MsG0580027046.01.T01:CDS 25.0%
! AAGAAAATATCCAAAACACT+AGG + Chr5:51819185-51819204 MsG0580027046.01.T01:intron 25.0%
! AATTTCTTTACATTTGAGTC+CGG + Chr5:51821023-51821042 MsG0580027046.01.T01:intron 25.0%
! AGAAAATATCCAAAACACTA+GGG + Chr5:51819186-51819205 MsG0580027046.01.T01:intron 25.0%
! ATATTCATAGGGTACATATT+TGG + Chr5:51819625-51819644 MsG0580027046.01.T01:intron 25.0%
! CTTGAGAAAAAACTAATCAT+AGG - Chr5:51819364-51819383 None:intergenic 25.0%
! GAGAAATGATCTTAAAGATT+TGG + Chr5:51821899-51821918 MsG0580027046.01.T01:CDS 25.0%
! GGATATTTATTAGGTCAATT+GGG + Chr5:51820367-51820386 MsG0580027046.01.T01:intron 25.0%
! GTGTGTTGTATAATTGAATT+AGG - Chr5:51822845-51822864 None:intergenic 25.0%
! TAAAATTCTTAAGAGCAATG+TGG - Chr5:51819302-51819321 None:intergenic 25.0%
! TAAAGATTTGGATCTTGAAT+TGG + Chr5:51821911-51821930 MsG0580027046.01.T01:CDS 25.0%
! TACCTCAATTTGCAAAAAAT+TGG - Chr5:51821509-51821528 None:intergenic 25.0%
! TAGAAGACCAAAAACAATAA+AGG - Chr5:51819965-51819984 None:intergenic 25.0%
! TATAGGAAGTTGTATCAAAA+TGG - Chr5:51821632-51821651 None:intergenic 25.0%
! TCATTCATTTATGATGTATG+TGG + Chr5:51820741-51820760 MsG0580027046.01.T01:intron 25.0%
! TGAAAAATAATGAATTCCGA+GGG - Chr5:51822399-51822418 None:intergenic 25.0%
! TGGATATTTATTAGGTCAAT+TGG + Chr5:51820366-51820385 MsG0580027046.01.T01:intron 25.0%
! TTACCAAGTAATTTCATCAA+TGG + Chr5:51818776-51818795 MsG0580027046.01.T01:CDS 25.0%
! TTCACAGAAGAATATTCATA+GGG + Chr5:51819614-51819633 MsG0580027046.01.T01:intron 25.0%
! TTCACATATTCTTGATACAA+CGG + Chr5:51819880-51819899 MsG0580027046.01.T01:intron 25.0%
! TTGAAAAATAATGAATTCCG+AGG - Chr5:51822400-51822419 None:intergenic 25.0%
! TTGATCAGAAGCAAAAATAA+AGG - Chr5:51819446-51819465 None:intergenic 25.0%
! TTTAGCTGAAGCATAAAAAA+TGG + Chr5:51821552-51821571 MsG0580027046.01.T01:intron 25.0%
! TTTGGATGTTCAATTGAAAA+TGG + Chr5:51824057-51824076 MsG0580027046.01.T01:CDS 25.0%
!! AAATGTACAAGTAAGTTTTG+AGG + Chr5:51823644-51823663 MsG0580027046.01.T01:intron 25.0%
!! GAAGAATCCTTTATTGTTTT+TGG + Chr5:51819955-51819974 MsG0580027046.01.T01:intron 25.0%
!! GAATTTATCAGATTTTTGCT+TGG + Chr5:51823986-51824005 MsG0580027046.01.T01:CDS 25.0%
!! TTTTTGCAAATTGAGGTAAT+TGG + Chr5:51821511-51821530 MsG0580027046.01.T01:intron 25.0%
!!! AATTTTTTATGTGCAGTGAT+CGG - Chr5:51823451-51823470 None:intergenic 25.0%
!!! AGGTAATTGGTTTTATTTGT+TGG + Chr5:51821524-51821543 MsG0580027046.01.T01:intron 25.0%
!!! ATGTTTTATGCAATTGACTT+TGG + Chr5:51823819-51823838 MsG0580027046.01.T01:intron 25.0%
!!! TATATGCAGGTTTTGATTTT+GGG + Chr5:51823879-51823898 MsG0580027046.01.T01:CDS 25.0%
!!! TGATTTTTATTTTTAGGGGT+TGG - Chr5:51823025-51823044 None:intergenic 25.0%
AAAAACAAGCTGAGTAATTG+TGG - Chr5:51821707-51821726 None:intergenic 30.0%
ACAGAATCCACTTATTAAGT+AGG - Chr5:51819049-51819068 None:intergenic 30.0%
ACATAAAATAGGGATATCAG+AGG + Chr5:51819816-51819835 MsG0580027046.01.T01:intron 30.0%
ACATGCAAAAAATGAACTAG+AGG - Chr5:51823554-51823573 None:intergenic 30.0%
AGAAAATTTATTTCATCCGC+GGG + Chr5:51824120-51824139 MsG0580027046.01.T01:CDS 30.0%
ATGCCATTGATGAAATTACT+TGG - Chr5:51818782-51818801 None:intergenic 30.0%
ATGGTCTCTATAATACTTTG+AGG - Chr5:51821613-51821632 None:intergenic 30.0%
ATGTAATTTGGAAGCTAGAA+GGG - Chr5:51819019-51819038 None:intergenic 30.0%
CAGAAAATTTATTTCATCCG+CGG + Chr5:51824119-51824138 MsG0580027046.01.T01:CDS 30.0%
CATAAAATAGGGATATCAGA+GGG + Chr5:51819817-51819836 MsG0580027046.01.T01:intron 30.0%
CATAATGCCTACTTAATAAG+TGG + Chr5:51819039-51819058 MsG0580027046.01.T01:intron 30.0%
CATTTCTCAATACTTTCGTT+TGG + Chr5:51820174-51820193 MsG0580027046.01.T01:intron 30.0%
CTTCACAGAAGAATATTCAT+AGG + Chr5:51819613-51819632 MsG0580027046.01.T01:intron 30.0%
GAAGCAAAAATAAAGGTTGT+CGG - Chr5:51819439-51819458 None:intergenic 30.0%
GATGTATGTGCTTCATAATA+TGG - Chr5:51820768-51820787 None:intergenic 30.0%
GCAAAAAAAATGCATCACAA+GGG - Chr5:51819668-51819687 None:intergenic 30.0%
GTAGGCATTATGATGTAATT+TGG - Chr5:51819031-51819050 None:intergenic 30.0%
GTATATATTGACCCATATTG+TGG - Chr5:51818981-51819000 None:intergenic 30.0%
TAATCAGAATCTTGATTCTG+AGG - Chr5:51819134-51819153 None:intergenic 30.0%
TAGGTTTGTGTTCATTTCAT+CGG + Chr5:51821099-51821118 MsG0580027046.01.T01:intron 30.0%
TATATAAGATACCAAGGTCA+AGG - Chr5:51823290-51823309 None:intergenic 30.0%
TCAGAATCAAGATTCTGATT+AGG + Chr5:51819133-51819152 MsG0580027046.01.T01:intron 30.0%
TGCAAAAAAAATGCATCACA+AGG - Chr5:51819669-51819688 None:intergenic 30.0%
TTATCACAGAAGATATCCAT+GGG + Chr5:51819567-51819586 MsG0580027046.01.T01:intron 30.0%
TTTATCACAGAAGATATCCA+TGG + Chr5:51819566-51819585 MsG0580027046.01.T01:intron 30.0%
! AAGTTTCTTACATTTGAGAC+CGG - Chr5:51820936-51820955 None:intergenic 30.0%
! AATTTTGTCAAGTTTCTTGG+CGG + Chr5:51822308-51822327 MsG0580027046.01.T01:CDS 30.0%
! ATTTAACTCAAGAGTGTGTT+TGG - Chr5:51820624-51820643 None:intergenic 30.0%
! GAAGAAATGTCTCTTTTTGA+TGG + Chr5:51819730-51819749 MsG0580027046.01.T01:intron 30.0%
! TCACAACTAAAAAAGCATGA+CGG - Chr5:51821960-51821979 None:intergenic 30.0%
! TCTCTATAATACTTTGAGGA+AGG - Chr5:51821609-51821628 None:intergenic 30.0%
! TGCAATTTTGTCAAGTTTCT+TGG + Chr5:51822305-51822324 MsG0580027046.01.T01:CDS 30.0%
! TGTGATAATTCTAGAAACCT+CGG - Chr5:51818944-51818963 None:intergenic 30.0%
! TTCTTGAAGTATTTGAGCAT+AGG + Chr5:51823573-51823592 MsG0580027046.01.T01:intron 30.0%
! TTTACGCATAAACTGTCTTT+TGG + Chr5:51819324-51819343 MsG0580027046.01.T01:intron 30.0%
! TTTGTCGAGATTTTTATTGC+AGG + Chr5:51818893-51818912 MsG0580027046.01.T01:intron 30.0%
!! ATTTCTCTTTAGAGTGTGTT+TGG + Chr5:51820083-51820102 MsG0580027046.01.T01:intron 30.0%
!! CTTTAAGATCATTTCTCGAA+AGG - Chr5:51821896-51821915 None:intergenic 30.0%
!! TATTTTCATTGGCTAGATGA+TGG - Chr5:51819241-51819260 None:intergenic 30.0%
!!! AGGGGTCATATGTAATTTTT+TGG + Chr5:51820346-51820365 MsG0580027046.01.T01:intron 30.0%
!!! CTCCAATTTTTTGCAAATTG+AGG + Chr5:51821504-51821523 MsG0580027046.01.T01:intron 30.0%
!!! GTATATGCAGGTTTTGATTT+TGG + Chr5:51823878-51823897 MsG0580027046.01.T01:CDS 30.0%
!!! TATTGTTTTTGGTCTTCTAG+TGG + Chr5:51819966-51819985 MsG0580027046.01.T01:intron 30.0%
!!! TGAGTTGATGTAATGTTTTG+AGG - Chr5:51820587-51820606 None:intergenic 30.0%
AAAATTATTTGGACCTGAGC+TGG + Chr5:51823465-51823484 MsG0580027046.01.T01:intron 35.0%
AAACCTGCATATACAGCATA+CGG - Chr5:51823872-51823891 None:intergenic 35.0%
AACTAACCAGAATTGAGACA+TGG - Chr5:51821298-51821317 None:intergenic 35.0%
AACTATGGATGCAATGAGTA+AGG - Chr5:51823744-51823763 None:intergenic 35.0%
ACAAACATAACAACAGACAG+GGG - Chr5:51823525-51823544 None:intergenic 35.0%
ACAGATAATTCAACCAAGAG+TGG - Chr5:51822242-51822261 None:intergenic 35.0%
ACATCCAAATCATACATAGC+AGG - Chr5:51824046-51824065 None:intergenic 35.0%
AGACAAACATAACAACAGAC+AGG - Chr5:51823527-51823546 None:intergenic 35.0%
AGATTAGGCTTAACCATGAA+CGG - Chr5:51819388-51819407 None:intergenic 35.0%
AGGTCAATTGGGAAAATTTG+AGG + Chr5:51820378-51820397 MsG0580027046.01.T01:intron 35.0%
AGGTTTGTGTTCATTTCATC+GGG + Chr5:51821100-51821119 MsG0580027046.01.T01:intron 35.0%
ATAGAGGGCAACTTGAAATA+AGG - Chr5:51822106-51822125 None:intergenic 35.0%
ATGAGTGAGCGACATAAAAT+AGG + Chr5:51819805-51819824 MsG0580027046.01.T01:intron 35.0%
ATTAACCGAGTCAATGCAAT+AGG + Chr5:51821080-51821099 MsG0580027046.01.T01:intron 35.0%
ATTTGCGGCAAAGTATGTAA+TGG - Chr5:51819497-51819516 None:intergenic 35.0%
CATTCCTGCTATGTATGATT+TGG + Chr5:51824039-51824058 MsG0580027046.01.T01:CDS 35.0%
GAAAATCCCTTAAAACTAGC+AGG - Chr5:51822026-51822045 None:intergenic 35.0%
GACAAACATAACAACAGACA+GGG - Chr5:51823526-51823545 None:intergenic 35.0%
GAGATCTGGTATTCAAAAGA+AGG - Chr5:51821268-51821287 None:intergenic 35.0%
GATGTAATTTGGAAGCTAGA+AGG - Chr5:51819020-51819039 None:intergenic 35.0%
GGATGTTCAATTGAAAATGG+TGG + Chr5:51824060-51824079 MsG0580027046.01.T01:CDS 35.0%
GTTTGGACCAAATATGAAAC+CGG - Chr5:51823429-51823448 None:intergenic 35.0%
TACTTTATAGCAAGATGCCT+AGG - Chr5:51823604-51823623 None:intergenic 35.0%
TAGAAACTGTATGGACTCTT+TGG - Chr5:51823402-51823421 None:intergenic 35.0%
TAGATATACTACTCCGAACT+TGG - Chr5:51822639-51822658 None:intergenic 35.0%
TATATTGACCCATATTGTGG+AGG - Chr5:51818978-51818997 None:intergenic 35.0%
TCAAAATGTTTAATCTCCCG+CGG - Chr5:51824139-51824158 None:intergenic 35.0%
TCCACTCAATAACAAAGTGA+AGG + Chr5:51820044-51820063 MsG0580027046.01.T01:intron 35.0%
TGAGTGAGCGACATAAAATA+GGG + Chr5:51819806-51819825 MsG0580027046.01.T01:intron 35.0%
TGATGAGGTACAGAAGAAAT+CGG + Chr5:51819929-51819948 MsG0580027046.01.T01:intron 35.0%
TGGTTAAGCCTAATCTTTAG+AGG + Chr5:51819392-51819411 MsG0580027046.01.T01:intron 35.0%
TTTGAGCATAGGTAATACCT+AGG + Chr5:51823584-51823603 MsG0580027046.01.T01:intron 35.0%
! AAGAATCCACTGATTATAGC+AGG - Chr5:51821871-51821890 None:intergenic 35.0%
! AGAATCCACTGATTATAGCA+GGG - Chr5:51821870-51821889 None:intergenic 35.0%
! AGATTTTTATTGCAGGTACG+AGG + Chr5:51818900-51818919 MsG0580027046.01.T01:intron 35.0%
! AGTTCTTTTCCTCCACAATA+TGG + Chr5:51818966-51818985 MsG0580027046.01.T01:intron 35.0%
! CACTTTTCTGAACAACTTCT+CGG - Chr5:51821760-51821779 None:intergenic 35.0%
! GATTCTGTTTTGTCAAGGAA+AGG + Chr5:51819061-51819080 MsG0580027046.01.T01:intron 35.0%
! GTGATAATTCTAGAAACCTC+GGG - Chr5:51818943-51818962 None:intergenic 35.0%
! GTTCTTTTCCTCCACAATAT+GGG + Chr5:51818967-51818986 MsG0580027046.01.T01:intron 35.0%
! TCTAGAAAGTGGAGGTATAT+GGG + Chr5:51818848-51818867 MsG0580027046.01.T01:intron 35.0%
! TGATAATTCTAGAAACCTCG+GGG - Chr5:51818942-51818961 None:intergenic 35.0%
! TTATGCAATTGACTTTGGCA+GGG + Chr5:51823824-51823843 MsG0580027046.01.T01:intron 35.0%
! TTTATGCAATTGACTTTGGC+AGG + Chr5:51823823-51823842 MsG0580027046.01.T01:intron 35.0%
!! AAGTGGATTCTGTTTTGTCA+AGG + Chr5:51819056-51819075 MsG0580027046.01.T01:intron 35.0%
!! ACAAACCTATTGCATTGACT+CGG - Chr5:51821088-51821107 None:intergenic 35.0%
!! ACCTTCACTTTGTTATTGAG+TGG - Chr5:51820048-51820067 None:intergenic 35.0%
!! CGACAAAATGCTAGTTCTAA+CGG - Chr5:51821662-51821681 None:intergenic 35.0%
!! TATTTCAAGTTGCCCTCTAT+TGG + Chr5:51822106-51822125 MsG0580027046.01.T01:CDS 35.0%
!! TGGTCTTATTGACTTCACAA+AGG + Chr5:51822355-51822374 MsG0580027046.01.T01:CDS 35.0%
!! TTGTGAGAAATTGACTCGAT+TGG + Chr5:51821974-51821993 MsG0580027046.01.T01:CDS 35.0%
!!! AATGTCTCTTTTTGATGGTG+TGG + Chr5:51819735-51819754 MsG0580027046.01.T01:intron 35.0%
!!! TGCTTATATTTTGACACGGA+GGG - Chr5:51820705-51820724 None:intergenic 35.0%
!!! TTGCTTATATTTTGACACGG+AGG - Chr5:51820706-51820725 None:intergenic 35.0%
!!! TTTTTTCTCAAGTCCGTTCA+TGG + Chr5:51819372-51819391 MsG0580027046.01.T01:intron 35.0%
AAACCGTAGCGTAACACTAA+AGG - Chr5:51820005-51820024 None:intergenic 40.0%
AACCGTAGCGTAACACTAAA+GGG - Chr5:51820004-51820023 None:intergenic 40.0%
AACCTGCATATACAGCATAC+GGG - Chr5:51823871-51823890 None:intergenic 40.0%
AATCCCTTAAAACTAGCAGG+CGG - Chr5:51822023-51822042 None:intergenic 40.0%
ACATACTTTGCCGCAAATCA+TGG + Chr5:51819499-51819518 MsG0580027046.01.T01:intron 40.0%
ACCTGGACTTCCAATATTAG+TGG + Chr5:51822745-51822764 MsG0580027046.01.T01:intron 40.0%
ACTTGGTCAGCTTAAACTTG+TGG + Chr5:51823927-51823946 MsG0580027046.01.T01:CDS 40.0%
AGAGGGCTGTTAAACTAGTT+GGG + Chr5:51819834-51819853 MsG0580027046.01.T01:intron 40.0%
AGCGATAAGTTCTCCAATAG+AGG - Chr5:51822122-51822141 None:intergenic 40.0%
ATACTCATTGTCTCCAGCAT+AGG - Chr5:51824019-51824038 None:intergenic 40.0%
CAAACAACCCGAGTAATAGA+GGG - Chr5:51819527-51819546 None:intergenic 40.0%
CCTGGACTTCCAATATTAGT+GGG + Chr5:51822746-51822765 MsG0580027046.01.T01:intron 40.0%
CGGCAAAGTATGTAATGGTT+TGG - Chr5:51819492-51819511 None:intergenic 40.0%
CTAAGCTCCGGTTTCATATT+TGG + Chr5:51823419-51823438 MsG0580027046.01.T01:intron 40.0%
CTAGTGTTCTGTCTAGAAAG+TGG + Chr5:51818837-51818856 MsG0580027046.01.T01:CDS 40.0%
CTCGACAAAACTTAAGTCGT+GGG - Chr5:51818882-51818901 None:intergenic 40.0%
CTGATAAATTCGATCTCGTG+TGG - Chr5:51823977-51823996 None:intergenic 40.0%
CTGGACTTCCAATATTAGTG+GGG + Chr5:51822747-51822766 MsG0580027046.01.T01:intron 40.0%
CTTACAATCGAGTCCAAGTT+CGG + Chr5:51822623-51822642 MsG0580027046.01.T01:intron 40.0%
CTTCTGATCAATGCATAGTG+TGG + Chr5:51819455-51819474 MsG0580027046.01.T01:intron 40.0%
CTTGGTGAAGAAACAGCAAT+CGG - Chr5:51821801-51821820 None:intergenic 40.0%
GAAACTTATGAATTGGCCCT+TGG - Chr5:51821819-51821838 None:intergenic 40.0%
GACAAGTCAAATATGTCCCA+TGG - Chr5:51819586-51819605 None:intergenic 40.0%
GACCAAGTATAGAATCCGAA+GGG - Chr5:51823915-51823934 None:intergenic 40.0%
GCGATAAGTTCTCCAATAGA+GGG - Chr5:51822121-51822140 None:intergenic 40.0%
GGTTTGTGTTCATTTCATCG+GGG + Chr5:51821101-51821120 MsG0580027046.01.T01:intron 40.0%
TCCATACAGTTTCTAAGCTC+CGG + Chr5:51823407-51823426 MsG0580027046.01.T01:intron 40.0%
TCTCGACAAAACTTAAGTCG+TGG - Chr5:51818883-51818902 None:intergenic 40.0%
TCTGACACAATTACTCCTTC+CGG - Chr5:51821045-51821064 None:intergenic 40.0%
TCTTGTAGATACTCCACTCT+TGG + Chr5:51822226-51822245 MsG0580027046.01.T01:CDS 40.0%
TCTTTACATTTGAGTCCGGA+AGG + Chr5:51821027-51821046 MsG0580027046.01.T01:intron 40.0%
TGACCAAGTATAGAATCCGA+AGG - Chr5:51823916-51823935 None:intergenic 40.0%
TGACTTTGCCCCACTAATAT+TGG - Chr5:51822758-51822777 None:intergenic 40.0%
TGGAAGTTGACAGAAATGAG+CGG + Chr5:51823947-51823966 MsG0580027046.01.T01:CDS 40.0%
TTCCCTTTAGTGTTACGCTA+CGG + Chr5:51819999-51820018 MsG0580027046.01.T01:intron 40.0%
TTGGATCTTGAATTGGGAGA+AGG + Chr5:51821918-51821937 MsG0580027046.01.T01:CDS 40.0%
TTGGGAAAAAGAATGCCCTT+CGG + Chr5:51823897-51823916 MsG0580027046.01.T01:CDS 40.0%
TTGGTGAAGAAACAGCAATC+GGG - Chr5:51821800-51821819 None:intergenic 40.0%
TTTATGTGCAGTGATCGGTT+TGG - Chr5:51823446-51823465 None:intergenic 40.0%
TTTCCTTGAATTCGCCTTCA+AGG - Chr5:51822202-51822221 None:intergenic 40.0%
TTTCTGAACAACTTCTCGGT+CGG - Chr5:51821756-51821775 None:intergenic 40.0%
! ACAGTTTGTTCTTACTCCCT+CGG + Chr5:51822380-51822399 MsG0580027046.01.T01:intron 40.0%
! ACTTTTCATCATACTCCCTC+CGG + Chr5:51820914-51820933 MsG0580027046.01.T01:intron 40.0%
! AGCCTAATCTTTAGAGGATG+TGG + Chr5:51819398-51819417 MsG0580027046.01.T01:intron 40.0%
! CTAGCATTTTGTCGCGTAAA+TGG + Chr5:51821668-51821687 MsG0580027046.01.T01:intron 40.0%
! CTCCACATCCTCTAAAGATT+AGG - Chr5:51819403-51819422 None:intergenic 40.0%
! GATATGCATCCCTAGTGTTT+TGG - Chr5:51819198-51819217 None:intergenic 40.0%
! GTCTAGAAAGTGGAGGTATA+TGG + Chr5:51818847-51818866 MsG0580027046.01.T01:intron 40.0%
! TATTACTCGGGTTGTTTGGT+GGG + Chr5:51819529-51819548 MsG0580027046.01.T01:intron 40.0%
! TCAAGAGTGTGTTTGGATTG+AGG - Chr5:51820617-51820636 None:intergenic 40.0%
! TCAGAATCTTGATTCTGAGG+TGG - Chr5:51819131-51819150 None:intergenic 40.0%
! TTCTTACATTTGAGACCGGA+GGG - Chr5:51820932-51820951 None:intergenic 40.0%
! TTTCATTGGCTAGATGATGG+AGG - Chr5:51819238-51819257 None:intergenic 40.0%
! TTTCTTACATTTGAGACCGG+AGG - Chr5:51820933-51820952 None:intergenic 40.0%
!! AAGTCACTGATTCGACCAAT+GGG - Chr5:51818758-51818777 None:intergenic 40.0%
!! CTTTAGAGTGTGTTTGGATG+AGG + Chr5:51820089-51820108 MsG0580027046.01.T01:intron 40.0%
!! GATTGCTGTTTCTTCACCAA+GGG + Chr5:51821800-51821819 MsG0580027046.01.T01:intron 40.0%
!! TAAGTCACTGATTCGACCAA+TGG - Chr5:51818759-51818778 None:intergenic 40.0%
!! TCTCTCTCTCTTTGGTGTTT+GGG - Chr5:51821188-51821207 None:intergenic 40.0%
!!! TATCCGCCTGCTAGTTTTAA+GGG + Chr5:51822017-51822036 MsG0580027046.01.T01:CDS 40.0%
AACATAACAACAGACAGGGG+CGG - Chr5:51823522-51823541 None:intergenic 45.0%
ACAGAACACTAGTCCTCACT+AGG - Chr5:51818829-51818848 None:intergenic 45.0%
ACCAATGGGATCACCACAAT+TGG - Chr5:51818744-51818763 None:intergenic 45.0%
ACCGGAGCTTAGAAACTGTA+TGG - Chr5:51823411-51823430 None:intergenic 45.0%
ACCTGCATATACAGCATACG+GGG - Chr5:51823870-51823889 None:intergenic 45.0%
AGAAATCTGAGTGCTCCGTT+TGG - Chr5:51823334-51823353 None:intergenic 45.0%
AGGCACAAGTACTTGAGGTT+TGG - Chr5:51822182-51822201 None:intergenic 45.0%
ATAAGGCTCTCAATCGCTTC+AGG - Chr5:51822089-51822108 None:intergenic 45.0%
CAGAGGGCTGTTAAACTAGT+TGG + Chr5:51819833-51819852 MsG0580027046.01.T01:intron 45.0%
CCAAACAACCCGAGTAATAG+AGG - Chr5:51819528-51819547 None:intergenic 45.0%
CCCACTAATATTGGAAGTCC+AGG - Chr5:51822749-51822768 None:intergenic 45.0%
CTAGGGATGCATATCTAACC+TGG + Chr5:51819203-51819222 MsG0580027046.01.T01:intron 45.0%
CTCAAGTACTTGTGCCTTGA+AGG + Chr5:51822185-51822204 MsG0580027046.01.T01:CDS 45.0%
CTTCAAGGCACAAGTACTTG+AGG - Chr5:51822187-51822206 None:intergenic 45.0%
GGAAGGTCACTGATCAAATC+AGG - Chr5:51821592-51821611 None:intergenic 45.0%
GTATATGACTGACGAGCACA+TGG + Chr5:51822268-51822287 MsG0580027046.01.T01:CDS 45.0%
GTGTTCTGTCTAGAAAGTGG+AGG + Chr5:51818840-51818859 MsG0580027046.01.T01:CDS 45.0%
GTTCTAACGGCGTCTCTTAT+AGG - Chr5:51821649-51821668 None:intergenic 45.0%
TAAGACCAACAAGTCTCTCG+AGG - Chr5:51822343-51822362 None:intergenic 45.0%
TAAGGCTCTCAATCGCTTCA+GGG - Chr5:51822088-51822107 None:intergenic 45.0%
TGCCCTTCGGATTCTATACT+TGG + Chr5:51823910-51823929 MsG0580027046.01.T01:CDS 45.0%
TGGTGAAGAAACAGCAATCG+GGG - Chr5:51821799-51821818 None:intergenic 45.0%
TGTCTCTCTCTCTCTCTCTT+TGG - Chr5:51821196-51821215 None:intergenic 45.0%
! CCTCTATTACTCGGGTTGTT+TGG + Chr5:51819525-51819544 MsG0580027046.01.T01:intron 45.0%
! CGCGTAAATGGAGGTACAAA+TGG + Chr5:51821680-51821699 MsG0580027046.01.T01:intron 45.0%
! CTATTACTCGGGTTGTTTGG+TGG + Chr5:51819528-51819547 MsG0580027046.01.T01:intron 45.0%
! GCATTTTGTCGCGTAAATGG+AGG + Chr5:51821671-51821690 MsG0580027046.01.T01:intron 45.0%
!! CGATTGCTGTTTCTTCACCA+AGG + Chr5:51821799-51821818 MsG0580027046.01.T01:intron 45.0%
!! CTCTCTCTCTCTTTGGTGTT+TGG - Chr5:51821189-51821208 None:intergenic 45.0%
!! CTCTCTTTGGTGTTTGGGTT+TGG - Chr5:51821183-51821202 None:intergenic 45.0%
!! CTTTGGTGTTTGGGTTTGGT+GGG - Chr5:51821179-51821198 None:intergenic 45.0%
!! TCTTTGGTGTTTGGGTTTGG+TGG - Chr5:51821180-51821199 None:intergenic 45.0%
!!! GTATCCGCCTGCTAGTTTTA+AGG + Chr5:51822016-51822035 MsG0580027046.01.T01:CDS 45.0%
!! AAATTTAAAAATTGAAATTA+GGG + Chr5:51820267-51820286 MsG0580027046.01.T01:intron 5.0%
!! TTAATATAATCAAATATTTA+AGG + Chr5:51823785-51823804 MsG0580027046.01.T01:intron 5.0%
!!! TATAAATTTTAGTTTTTTTT+GGG + Chr5:51820242-51820261 MsG0580027046.01.T01:intron 5.0%
!!! TTATAAATTTTAGTTTTTTT+TGG + Chr5:51820241-51820260 MsG0580027046.01.T01:intron 5.0%
AAGGCTCTCAATCGCTTCAG+GGG - Chr5:51822087-51822106 None:intergenic 50.0%
ACCTGCCCTGCTATAATCAG+TGG + Chr5:51821862-51821881 MsG0580027046.01.T01:intron 50.0%
ACTAGTCCTCACTAGGTCTC+GGG - Chr5:51818822-51818841 None:intergenic 50.0%
ACTTCTCGGTCGGTTGAGTT+AGG - Chr5:51821746-51821765 None:intergenic 50.0%
CAAGGTCAAGGCTGCAAACT+AGG - Chr5:51823278-51823297 None:intergenic 50.0%
CACTAGTCCTCACTAGGTCT+CGG - Chr5:51818823-51818842 None:intergenic 50.0%
CCAACAAGTCTCTCGAGGTT+AGG - Chr5:51822338-51822357 None:intergenic 50.0%
CCAGAATTGAGACATGGCAG+AGG - Chr5:51821292-51821311 None:intergenic 50.0%
CCTAACCTCGAGAGACTTGT+TGG + Chr5:51822335-51822354 MsG0580027046.01.T01:CDS 50.0%
CCTCTGCCATGTCTCAATTC+TGG + Chr5:51821289-51821308 MsG0580027046.01.T01:intron 50.0%
CTTCTCGGTCGGTTGAGTTA+GGG - Chr5:51821745-51821764 None:intergenic 50.0%
GCCAATTGTGGTGATCCCAT+TGG + Chr5:51818740-51818759 MsG0580027046.01.T01:CDS 50.0%
GGTGAAGAAACAGCAATCGG+GGG - Chr5:51821798-51821817 None:intergenic 50.0%
GTGCCTTGAAGGCGAATTCA+AGG + Chr5:51822196-51822215 MsG0580027046.01.T01:CDS 50.0%
TATTTGGACCTGAGCTGGTG+TGG + Chr5:51823470-51823489 MsG0580027046.01.T01:intron 50.0%
TCATGGCGCCCTCTATTACT+CGG + Chr5:51819516-51819535 MsG0580027046.01.T01:intron 50.0%
TCCACGAAGAAGGCCAATTG+TGG + Chr5:51818728-51818747 MsG0580027046.01.T01:CDS 50.0%
TGATGGAGGATCTTGAGACC+AGG - Chr5:51819224-51819243 None:intergenic 50.0%
! CTAGTTTGCAGCCTTGACCT+TGG + Chr5:51823276-51823295 MsG0580027046.01.T01:intron 50.0%
! TCCACTGATTATAGCAGGGC+AGG - Chr5:51821866-51821885 None:intergenic 50.0%
!! AAGGGGGTGTTCTGTTGTCA+GGG + Chr5:51822718-51822737 MsG0580027046.01.T01:intron 50.0%
!! ACCACAATTGGCCTTCTTCG+TGG - Chr5:51818732-51818751 None:intergenic 50.0%
!! ATAGAGGGCGCCATGATTTG+CGG - Chr5:51819512-51819531 None:intergenic 50.0%
!! ATTCTGAGGTGGCATTCGAC+TGG - Chr5:51819120-51819139 None:intergenic 50.0%
CATGGCGCCCTCTATTACTC+GGG + Chr5:51819517-51819536 MsG0580027046.01.T01:intron 55.0%
GCCCCGTATGCTGTATATGC+AGG + Chr5:51823866-51823885 MsG0580027046.01.T01:CDS 55.0%
GCTTGGCTGTTCACCTATGC+TGG + Chr5:51824003-51824022 MsG0580027046.01.T01:CDS 55.0%
TACGAGGATCTCGAAGACCC+TGG + Chr5:51818916-51818935 MsG0580027046.01.T01:CDS 55.0%
TGCAATAGCCACACCAGCTC+AGG - Chr5:51823481-51823500 None:intergenic 55.0%
! ATTCTAGAAACCTCGGGGCC+AGG - Chr5:51818937-51818956 None:intergenic 55.0%
! TTCTAGAAACCTCGGGGCCA+GGG - Chr5:51818936-51818955 None:intergenic 55.0%
!! AGGGGGTGTTCTGTTGTCAG+GGG + Chr5:51822719-51822738 MsG0580027046.01.T01:intron 55.0%
ATTGCAACCCTGCCCTGCTC+AGG + Chr5:51823495-51823514 MsG0580027046.01.T01:intron 60.0%
CTAGGTCTCGGGCGTTCAAG+TGG - Chr5:51818811-51818830 None:intergenic 60.0%
CTCGGGCGTTCAAGTGGTCT+AGG - Chr5:51818805-51818824 None:intergenic 60.0%
GACATGGCAGAGGCGAGATC+TGG - Chr5:51821282-51821301 None:intergenic 60.0%
GGGTGTTCTGTTGTCAGGGG+CGG + Chr5:51822722-51822741 MsG0580027046.01.T01:intron 60.0%
TGAACGCCCGAGACCTAGTG+AGG + Chr5:51818813-51818832 MsG0580027046.01.T01:CDS 60.0%
TCTGTTGTCAGGGGCGGACC+TGG + Chr5:51822728-51822747 MsG0580027046.01.T01:intron 65.0%
AGACAGGGGCGGACCTGAGC+AGG - Chr5:51823511-51823530 None:intergenic 70.0%
GACAGGGGCGGACCTGAGCA+GGG - Chr5:51823510-51823529 None:intergenic 70.0%
TCTCGAAGACCCTGGCCCCG+AGG + Chr5:51818924-51818943 MsG0580027046.01.T01:CDS 70.0%
GGGCGGACCTGAGCAGGGCA+GGG - Chr5:51823505-51823524 None:intergenic 75.0%
! GGGGCGGACCTGAGCAGGGC+AGG - Chr5:51823506-51823525 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr5 gene 51818719 51824165 51818719 ID=MsG0580027046.01;Name=MsG0580027046.01
Chr5 mRNA 51818719 51824165 51818719 ID=MsG0580027046.01.T01;Parent=MsG0580027046.01;Name=MsG0580027046.01.T01;_AED=0.31;_eAED=0.31;_QI=0|0|0|1|1|1|4|0|336
Chr5 exon 51818719 51818861 51818719 ID=MsG0580027046.01.T01:exon:29073;Parent=MsG0580027046.01.T01
Chr5 exon 51818915 51818966 51818915 ID=MsG0580027046.01.T01:exon:29074;Parent=MsG0580027046.01.T01
Chr5 exon 51821882 51822376 51821882 ID=MsG0580027046.01.T01:exon:29075;Parent=MsG0580027046.01.T01
Chr5 exon 51823845 51824165 51823845 ID=MsG0580027046.01.T01:exon:29076;Parent=MsG0580027046.01.T01
Chr5 CDS 51818719 51818861 51818719 ID=MsG0580027046.01.T01:cds;Parent=MsG0580027046.01.T01
Chr5 CDS 51818915 51818966 51818915 ID=MsG0580027046.01.T01:cds;Parent=MsG0580027046.01.T01
Chr5 CDS 51821882 51822376 51821882 ID=MsG0580027046.01.T01:cds;Parent=MsG0580027046.01.T01
Chr5 CDS 51823845 51824165 51823845 ID=MsG0580027046.01.T01:cds;Parent=MsG0580027046.01.T01
Gene Sequence

>MsG0580027046.01.T01

ATGACTCTGTCCACGAAGAAGGCCAATTGTGGTGATCCCATTGGTCGAATCAGTGACTTACCAAGTAATTTCATCAATGGCATCCTAGACCACTTGAACGCCCGAGACCTAGTGAGGACTAGTGTTCTGTCTAGAAAGTGGAGGTACGAGGATCTCGAAGACCCTGGCCCCGAGGTTTCTAGAATTATCACAGAATGGATTCTTTTCCTTTCGAGAAATGATCTTAAAGATTTGGATCTTGAATTGGGAGAAGGTGAATTCTTTAGAATGCCGTCATGCTTTTTTAGTTGTGAGAAATTGACTCGATTGGAGCTCTCGCGCTGCGAGTTGTATCCGCCTGCTAGTTTTAAGGGATTTTCGTATTTGAAGTGTCTCAATCTTCATCAAGTTTTGATATCCCCTGAAGCGATTGAGAGCCTTATTTCAAGTTGCCCTCTATTGGAGAACTTATCGCTGTCATACTTTGACTGTTTAGCTCTTACTGTACGTGCTCCAAACCTCAAGTACTTGTGCCTTGAAGGCGAATTCAAGGAAATTTGTCTTGTAGATACTCCACTCTTGGTTGAATTATCTGTTGCTATGTATATGACTGACGAGCACATGGAGCAAAGCTCAACTTGCAATTTTGTCAAGTTTCTTGGCGGTGTGCCTAACCTCGAGAGACTTGTTGGTCTTATTGACTTCACAAAGGGTTCATCAAACATATCAAATGCCCCGTATGCTGTATATGCAGGTTTTGATTTTGGGAAAAAGAATGCCCTTCGGATTCTATACTTGGTCAGCTTAAACTTGTGGAAGTTGACAGAAATGAGCGGTATGCCACACGAGATCGAATTTATCAGATTTTTGCTTGGCTGTTCACCTATGCTGGAGACAATGAGTATCATTCCTGCTATGTATGATTTGGATGTTCAATTGAAAATGGTGGTCGAACTGATGAAATTTCGAAGAGCTTCTACTAAAGCAGAAAATTTATTTCATCCGCGGGAGATTAAACATTTTGAATTTTGA
Protein sequence

>MsG0580027046.01.T01

MTLSTKKANCGDPIGRISDLPSNFINGILDHLNARDLVRTSVLSRKWRYEDLEDPGPEVSRIITEWILFLSRNDLKDLDLELGEGEFFRMPSCFFSCEKLTRLELSRCELYPPASFKGFSYLKCLNLHQVLISPEAIESLISSCPLLENLSLSYFDCLALTVRAPNLKYLCLEGEFKEICLVDTPLLVELSVAMYMTDEHMEQSSTCNFVKFLGGVPNLERLVGLIDFTKGSSNISNAPYAVYAGFDFGKKNALRILYLVSLNLWKLTEMSGMPHEIEFIRFLLGCSPMLETMSIIPAMYDLDVQLKMVVELMKFRRASTKAENLFHPREIKHFEF*