AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180006104.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006104.01.T01 MTR_1g114560 73.684 209 14 2 114 281 112 320 3.19e-96 296
MsG0180006104.01.T01 MTR_1g114590 81.564 179 28 3 297 470 15 193 5.48e-94 284
MsG0180006104.01.T01 MTR_5g015740 81.564 179 28 3 297 470 15 193 2.19e-93 283
MsG0180006104.01.T01 MTR_1g114540 100.000 113 0 0 1 113 996 1108 2.74e-65 228
MsG0180006104.01.T01 MTR_1g038793 87.719 114 13 1 1 113 1005 1118 3.07e-55 199
MsG0180006104.01.T01 MTR_1g023610 72.727 88 23 1 1 87 81 168 6.54e-34 127
MsG0180006104.01.T01 MTR_8g464480 40.000 130 57 3 1 113 1010 1135 6.27e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180006104.01.T01 AT5G08340 56.522 207 48 3 114 279 82 287 3.53e-65 214
MsG0180006104.01.T01 AT5G08340 56.522 207 48 3 114 279 82 287 1.46e-64 213
MsG0180006104.01.T01 AT5G23330 54.106 207 53 4 114 278 66 272 9.70e-63 207
MsG0180006104.01.T01 AT1G01290 55.618 178 48 4 321 467 46 223 6.90e-50 171
MsG0180006104.01.T01 AT1G01290 55.618 178 48 4 321 467 46 223 6.90e-50 171
MsG0180006104.01.T01 AT3G19960 75.424 118 22 3 1 113 999 1114 2.90e-44 167
MsG0180006104.01.T01 AT3G19960 75.424 118 22 3 1 113 999 1114 2.90e-44 167
MsG0180006104.01.T01 AT3G19960 75.424 118 22 3 1 113 999 1114 2.90e-44 167
MsG0180006104.01.T01 AT3G19960 75.424 118 22 3 1 113 1009 1124 3.39e-44 167
MsG0180006104.01.T01 AT1G50360 71.681 113 30 1 1 113 991 1101 5.53e-41 157

Find 109 sgRNAs with CRISPR-Local

Find 697 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACACCATTGTGTACTAAA+TGG 0.184271 1:+100206742 MsG0180006104.01.T01:CDS
GAAATATGTCTCAGAGCTTT+TGG 0.197621 1:+100203761 MsG0180006104.01.T01:CDS
CAGGAAATGGAATCTGTATT+TGG 0.204645 1:+100208195 MsG0180006104.01.T01:intron
GTTCTCTTGCTACTTTCTTT+TGG 0.215531 1:-100208363 None:intergenic
ATCTTGTTCCACTGCTTTCT+TGG 0.220520 1:-100198530 None:intergenic
GAGCAAAGAAGTCAAGTATT+TGG 0.241361 1:+100198600 MsG0180006104.01.T01:CDS
TTGACTCATACTGGAAATTC+AGG 0.267783 1:+100208315 MsG0180006104.01.T01:CDS
CAAGGAATACAGCTGGGATA+TGG 0.272179 1:+100198491 MsG0180006104.01.T01:CDS
CGAGACCTGGCCCCTCTCTT+TGG 0.273632 1:-100203700 None:intergenic
ACAACATCGTCTTGTATTAA+TGG 0.318588 1:+100203788 MsG0180006104.01.T01:CDS
ATTCAGCTTTAGCCAGTATA+AGG 0.322211 1:+100203826 MsG0180006104.01.T01:CDS
GCTGTTTGCAAAGTAAATCT+TGG 0.336888 1:+100208393 MsG0180006104.01.T01:CDS
AGGAAATGGAATCTGTATTT+GGG 0.339342 1:+100208196 MsG0180006104.01.T01:intron
AACCTTCTAAGTTCTCGGTC+TGG 0.345854 1:-100198681 None:intergenic
GACTTCAGTGTAACAATAGA+AGG 0.351874 1:+100208585 MsG0180006104.01.T01:CDS
TGGAAAGAAGGTGTTTGATT+TGG 0.355147 1:+100208413 MsG0180006104.01.T01:CDS
TTAGCCAATCAAATGGAAAA+AGG 0.360550 1:+100208438 MsG0180006104.01.T01:CDS
AGCTGCTTCAACGGTAAAAC+CGG 0.364836 1:+100208611 MsG0180006104.01.T01:CDS
ACCTTCTAAGTTCTCGGTCT+GGG 0.365311 1:-100198680 None:intergenic
CTTGGGCATGGCTAAGGTAT+TGG 0.377897 1:+100201932 MsG0180006104.01.T01:CDS
CCTCTCTTTGGAGCCAGTAC+TGG 0.378348 1:-100203688 None:intergenic
ACCCAGACCGAGAACTTAGA+AGG 0.390941 1:+100198679 MsG0180006104.01.T01:CDS
TGAAATCCATGGAAGAAGTA+TGG 0.394820 1:+100198361 MsG0180006104.01.T01:CDS
TGGCGATGATGCCAAGTTCT+TGG 0.397461 1:+100198620 MsG0180006104.01.T01:CDS
CTTACGGTGGCGAAAATTGC+CGG 0.402730 1:+100208468 MsG0180006104.01.T01:CDS
AGAGTGCGTGGAGTTGTTGC+AGG 0.404410 1:+100203353 MsG0180006104.01.T01:CDS
TAGGAGCAGACACCTTATAC+TGG 0.407488 1:-100203838 None:intergenic
GACACCATTGTGTACTAAAT+GGG 0.414443 1:+100206743 MsG0180006104.01.T01:CDS
AATCCACTTGCACGTGTGTA+AGG 0.416239 1:-100208545 None:intergenic
TGTTATGGCACAATGGAATC+AGG 0.423838 1:-100208518 None:intergenic
TTACATAATAAAATCTGTTA+TGG 0.427036 1:+100203635 MsG0180006104.01.T01:CDS
CAAAGTAAATCTTGGAAAGA+AGG 0.428041 1:+100208401 MsG0180006104.01.T01:CDS
TTCTTGGTTGAGGTAAAATC+TGG 0.428126 1:+100198636 MsG0180006104.01.T01:CDS
GCAGGTGAGAACTACCGATT+TGG 0.429036 1:+100203549 MsG0180006104.01.T01:intron
AGCTGAATGTTTCTCGATCA+TGG 0.431802 1:-100203811 None:intergenic
TTTGGTATTAGCCAATCAAA+TGG 0.445523 1:+100208431 MsG0180006104.01.T01:CDS
TTTCTGCCATACTTCTTCCA+TGG 0.446667 1:-100198367 None:intergenic
GCTATGTGAGGAGTATGAAA+TGG 0.449882 1:+100203608 MsG0180006104.01.T01:CDS
AAGGAATACAGCTGGGATAT+GGG 0.454783 1:+100198492 MsG0180006104.01.T01:CDS
CCAGGTGGAATTGTAGCATT+GGG 0.455534 1:+100201832 MsG0180006104.01.T01:intron
GCCAGGTGGAATTGTAGCAT+TGG 0.463776 1:+100201831 MsG0180006104.01.T01:intron
CTCCTACAGCAAGCGCTTCG+CGG 0.464279 1:-100203734 None:intergenic
CGGTAAAACCGGGGTTGAGA+TGG 0.475764 1:+100208622 MsG0180006104.01.T01:CDS
AAATTCAGGGGAAGCTCAAA+TGG 0.480022 1:+100208329 MsG0180006104.01.T01:CDS
TACACAATGGTGTCAAATAG+AGG 0.487311 1:-100206734 None:intergenic
CATGCCCAAGATAAAAGAAA+TGG 0.490629 1:-100201919 None:intergenic
CAGCTGCTTTATATCCAAAT+CGG 0.493817 1:-100203563 None:intergenic
AGCAAGGCTCTTCTTTGCAA+TGG 0.495579 1:-100198418 None:intergenic
GCATCTATAGCCTCTGTTAG+CGG 0.500412 1:-100206693 None:intergenic
TGATGCCAAGTTCTTGGTTG+AGG 0.503362 1:+100198626 MsG0180006104.01.T01:CDS
TTTGAGCGTTATAAGTCGGC+TGG 0.518138 1:+100198566 MsG0180006104.01.T01:CDS
AACTTGCAATTCAAGCATCA+AGG 0.520418 1:+100201887 MsG0180006104.01.T01:CDS
ATGAACTGAAATGAAATCCA+TGG 0.522558 1:+100198350 None:intergenic
CGATTTGGATATAAAGCAGC+TGG 0.526419 1:+100203564 MsG0180006104.01.T01:CDS
TAAGGTATTGGTGGGAACAT+AGG 0.530411 1:+100201944 MsG0180006104.01.T01:CDS
TGCAAAGAAGAGCCTTGCTA+TGG 0.532680 1:+100198422 MsG0180006104.01.T01:CDS
GCGATGACAAGGAATACAGC+TGG 0.535013 1:+100198484 MsG0180006104.01.T01:CDS
CATTGCTTCCATCTCAACCC+CGG 0.540442 1:-100208630 None:intergenic
GGGCATGGCTAAGGTATTGG+TGG 0.550409 1:+100201935 MsG0180006104.01.T01:CDS
CTGGTTTGAGCGTTATAAGT+CGG 0.553826 1:+100198562 MsG0180006104.01.T01:CDS
GGAACAAGATCTATGAGTGC+TGG 0.557354 1:+100198543 MsG0180006104.01.T01:CDS
ATTCCATTGTGCCATAACAT+AGG 0.562881 1:+100208522 MsG0180006104.01.T01:CDS
GACGGAATATCTGCAGTCAC+AGG 0.563009 1:+100201733 MsG0180006104.01.T01:CDS
GCTGCTTCAACGGTAAAACC+GGG 0.563256 1:+100208612 MsG0180006104.01.T01:CDS
GCAATTCAAGCATCAAGGGC+TGG 0.566180 1:+100201892 MsG0180006104.01.T01:CDS
GACACATGAGGTTCATTCGC+AGG 0.569067 1:-100208261 None:intergenic
TTTGGGGACTTTCCGCCAGA+CGG 0.570296 1:+100208213 MsG0180006104.01.T01:CDS
ACAGAGCTAAGTAGTCCGTC+TGG 0.573316 1:-100208228 None:intergenic
CAGTACTGGCTCCAAAGAGA+GGG 0.575024 1:+100203689 MsG0180006104.01.T01:CDS
ACTTCAGTGTAACAATAGAA+GGG 0.575457 1:+100208586 MsG0180006104.01.T01:CDS
AGGCCTTACACACGTGCAAG+TGG 0.575488 1:+100208542 MsG0180006104.01.T01:CDS
CGTGTGTAAGGCCTATGTTA+TGG 0.577316 1:-100208533 None:intergenic
TCAAAAGAACTTAGAGTGCG+TGG 0.579113 1:+100203341 MsG0180006104.01.T01:CDS
TGGCTCCAAAGAGAGGGGCC+AGG 0.581057 1:+100203695 MsG0180006104.01.T01:CDS
GGGATATGGGAAATAATCAC+AGG 0.582242 1:+100198505 MsG0180006104.01.T01:CDS
CATGTGTCATCTCGAAACAT+AGG 0.582301 1:+100208276 MsG0180006104.01.T01:CDS
TTCTATAGTGCCGCTAACAG+AGG 0.588819 1:+100206683 MsG0180006104.01.T01:CDS
TGACTCATACTGGAAATTCA+GGG 0.590004 1:+100208316 MsG0180006104.01.T01:CDS
GGACACGTGTTGACGAGACC+TGG 0.590486 1:-100203713 None:intergenic
AGAAGGGGAAGCTGCTTCAA+CGG 0.590681 1:+100208602 MsG0180006104.01.T01:CDS
AAGTTTGATGCTCTGCACAT+AGG 0.596134 1:+100201856 MsG0180006104.01.T01:CDS
TTTCAGAATCATCCATAGCA+AGG 0.597063 1:-100198434 None:intergenic
GGCATGGCTAAGGTATTGGT+GGG 0.598357 1:+100201936 MsG0180006104.01.T01:CDS
ACTTGCAATTCAAGCATCAA+GGG 0.598932 1:+100201888 MsG0180006104.01.T01:CDS
CCAGTACTGGCTCCAAAGAG+AGG 0.599060 1:+100203688 MsG0180006104.01.T01:CDS
TGTTAATGCAAGCGATGACA+AGG 0.601648 1:+100198473 MsG0180006104.01.T01:CDS
GTCCGCGAAGCGCTTGCTGT+AGG 0.605733 1:+100203732 MsG0180006104.01.T01:CDS
CGATGACAAGGAATACAGCT+GGG 0.615681 1:+100198485 MsG0180006104.01.T01:CDS
ATTTACTTTGCAAACAGCAG+TGG 0.619074 1:-100208388 None:intergenic
GCCCAAGATAAAAGAAATGG+AGG 0.623859 1:-100201916 None:intergenic
CTTCAGTGTAACAATAGAAG+GGG 0.630495 1:+100208587 MsG0180006104.01.T01:CDS
TTGCTATGGATGATTCTGAA+AGG 0.633297 1:+100198436 MsG0180006104.01.T01:CDS
AACTTCTCAACAAATTGTCG+CGG 0.636369 1:-100203317 None:intergenic
CACAGGCGCCAAGAAAGCAG+TGG 0.639662 1:+100198522 MsG0180006104.01.T01:CDS
GGAAATGGAATCTGTATTTG+GGG 0.639864 1:+100208197 MsG0180006104.01.T01:intron
GACTCATACTGGAAATTCAG+GGG 0.640275 1:+100208317 MsG0180006104.01.T01:CDS
GGATTTGAGATTGAATCATG+AGG 0.642472 1:+100208563 MsG0180006104.01.T01:CDS
GTGTCAAATAGAGGCTATAG+CGG 0.643040 1:-100206725 None:intergenic
TGTCAAATAGAGGCTATAGC+GGG 0.643182 1:-100206724 None:intergenic
GAACGTGAAATCATCTCCGA+CGG 0.657470 1:+100201715 MsG0180006104.01.T01:CDS
AGAGTTAGAAAAGCTATGTG+AGG 0.658219 1:+100203596 MsG0180006104.01.T01:CDS
AGGCCTATGTTATGGCACAA+TGG 0.661858 1:-100208525 None:intergenic
TGTGACTGCAGATATTCCGT+CGG 0.671866 1:-100201731 None:intergenic
GAGCTAAGTAGTCCGTCTGG+CGG 0.683671 1:-100208225 None:intergenic
AAAAGGAGACGTGCTTACGG+TGG 0.688489 1:+100208455 MsG0180006104.01.T01:CDS
ATGTTTCGAGATGACACATG+AGG 0.689895 1:-100208273 None:intergenic
AATACCCATTTAGTACACAA+TGG 0.692712 1:-100206747 None:intergenic
AGTACTGGCTCCAAAGAGAG+GGG 0.695442 1:+100203690 MsG0180006104.01.T01:CDS
CTGCTTCAACGGTAAAACCG+GGG 0.723096 1:+100208613 MsG0180006104.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTTAAAAATTTATTT+TGG - Chr1:100205149-100205168 None:intergenic 0.0%
!! ATGAATTATTTATTGTAATT+AGG + Chr1:100198990-100199009 MsG0180006104.01.T01:intron 10.0%
!! TCTATTAATTTCATAATTTA+TGG + Chr1:100199166-100199185 MsG0180006104.01.T01:intron 10.0%
!! TTATCTATAAAAATTATGTT+TGG + Chr1:100200353-100200372 MsG0180006104.01.T01:intron 10.0%
!!! AATAAATCGAATTTTAATTA+AGG + Chr1:100200105-100200124 MsG0180006104.01.T01:intron 10.0%
!!! AATTAAAATTCGATTTATTT+TGG + Chr1:100199851-100199870 MsG0180006104.01.T01:intron 10.0%
!!! ATAAATCGAATTTTAATTAA+GGG + Chr1:100200106-100200125 MsG0180006104.01.T01:intron 10.0%
!!! ATTTTTATTTTTTTTTCCTT+TGG + Chr1:100198859-100198878 MsG0180006104.01.T01:intron 10.0%
!!! CAATATATATATTTTTTTGA+AGG + Chr1:100204533-100204552 MsG0180006104.01.T01:intron 10.0%
!!! CACTATATTTTTTTAATAAA+CGG + Chr1:100204733-100204752 MsG0180006104.01.T01:intron 10.0%
!!! TTTTAAAAATTTATTTTGGA+AGG - Chr1:100205145-100205164 None:intergenic 10.0%
!!! TTTTTATTTTTTTTTCCTTT+GGG + Chr1:100198860-100198879 MsG0180006104.01.T01:intron 10.0%
!! AAAAAAAATTAGTTCATACT+TGG + Chr1:100204337-100204356 MsG0180006104.01.T01:intron 15.0%
!! AAAGATCATAAATAGTAAAA+TGG + Chr1:100205738-100205757 MsG0180006104.01.T01:intron 15.0%
!! AAATTTCTGATAAATAAACA+TGG - Chr1:100199030-100199049 None:intergenic 15.0%
!! AATGAAGGATTAAAAAAAAA+AGG + Chr1:100207309-100207328 MsG0180006104.01.T01:intron 15.0%
!! AATTTATACAAGAATTAAGA+GGG - Chr1:100200787-100200806 None:intergenic 15.0%
!! ATAGATTCAAAAAATTATTG+TGG - Chr1:100204261-100204280 None:intergenic 15.0%
!! ATATATTATGATTATGTGAA+CGG - Chr1:100203428-100203447 None:intergenic 15.0%
!! ATGAAGGATTAAAAAAAAAA+GGG + Chr1:100207310-100207329 MsG0180006104.01.T01:intron 15.0%
!! CATCTAAAAAAAGTTAAAAT+TGG + Chr1:100200933-100200952 MsG0180006104.01.T01:intron 15.0%
!! GAATATATTGAATTATTGAA+AGG + Chr1:100202023-100202042 MsG0180006104.01.T01:intron 15.0%
!! GGTATAATATAACAATATAT+TGG - Chr1:100205190-100205209 None:intergenic 15.0%
!! TAATTTATACAAGAATTAAG+AGG - Chr1:100200788-100200807 None:intergenic 15.0%
!! TATAAATCAAAATGACTATT+TGG + Chr1:100200446-100200465 MsG0180006104.01.T01:intron 15.0%
!! TATCTTGATTTATCATAAAA+TGG + Chr1:100199531-100199550 MsG0180006104.01.T01:intron 15.0%
!! TGAACCAATAAAAAAAATTA+AGG - Chr1:100201648-100201667 None:intergenic 15.0%
!! TGACAAAATTAGAATAATTA+AGG - Chr1:100203392-100203411 None:intergenic 15.0%
!! TTACATAATAAAATCTGTTA+TGG + Chr1:100203635-100203654 MsG0180006104.01.T01:CDS 15.0%
!! TTCACATAATCATAATATAT+TGG + Chr1:100203428-100203447 MsG0180006104.01.T01:intron 15.0%
!!! AAAAAACTATTTTGAGTTAA+AGG + Chr1:100205350-100205369 MsG0180006104.01.T01:intron 15.0%
!!! AACTATTTTGAGTTTTTTTT+TGG + Chr1:100205232-100205251 MsG0180006104.01.T01:intron 15.0%
!!! AAGGTTATTTTAAATAAACT+TGG + Chr1:100198760-100198779 MsG0180006104.01.T01:intron 15.0%
!!! AATTTTTATTTGTTGAGTAT+TGG - Chr1:100203668-100203687 None:intergenic 15.0%
!!! ACATTTTCCATTTTAAATAA+TGG + Chr1:100201173-100201192 MsG0180006104.01.T01:intron 15.0%
!!! AGTTTTAATTCAAAAATGTT+AGG + Chr1:100199914-100199933 MsG0180006104.01.T01:intron 15.0%
!!! ATAGTGTTTTTTTTTTTTTG+TGG - Chr1:100204719-100204738 None:intergenic 15.0%
!!! ATTTTTTTTACCAATCATTT+AGG + Chr1:100204599-100204618 MsG0180006104.01.T01:intron 15.0%
!!! CAAATATAATTTTGTCAAAT+GGG + Chr1:100204361-100204380 MsG0180006104.01.T01:intron 15.0%
!!! GTTTTTTCATTGTTTTTTTT+TGG - Chr1:100200986-100201005 None:intergenic 15.0%
!!! TAATATAGTAACTTTTACAT+CGG - Chr1:100201128-100201147 None:intergenic 15.0%
!!! TATATAGTATTACTTTTTTG+AGG + Chr1:100204421-100204440 MsG0180006104.01.T01:intron 15.0%
!!! TATTTTATCAACTATAACAT+AGG - Chr1:100203039-100203058 None:intergenic 15.0%
!!! TCGTTAGTTTTTTTTTATAT+AGG - Chr1:100205641-100205660 None:intergenic 15.0%
!!! TGATATTTTAAACAATCATT+TGG + Chr1:100205594-100205613 MsG0180006104.01.T01:intron 15.0%
!!! TTTCATAAAATTTTCCTTTT+GGG - Chr1:100201065-100201084 None:intergenic 15.0%
!!! TTTTATTTTTTTTTCCTTTG+GGG + Chr1:100198861-100198880 MsG0180006104.01.T01:intron 15.0%
!!! TTTTCATAAAATTTTCCTTT+TGG - Chr1:100201066-100201085 None:intergenic 15.0%
!!! TTTTTTATATAGGAATTATC+TGG - Chr1:100205631-100205650 None:intergenic 15.0%
!! AAAAAACAAAAGTAAATGTG+TGG - Chr1:100205120-100205139 None:intergenic 20.0%
!! AAAGAAATAAGGAAATGTTA+AGG + Chr1:100205692-100205711 MsG0180006104.01.T01:intron 20.0%
!! AAATGTTAATAATTACTCCA+CGG - Chr1:100205564-100205583 None:intergenic 20.0%
!! AACTAAAAAATTGTATTGGA+GGG - Chr1:100202678-100202697 None:intergenic 20.0%
!! AATCTTTATCCTCATATAAA+CGG + Chr1:100203499-100203518 MsG0180006104.01.T01:intron 20.0%
!! AGCAAAAAGAAGAAATAAAA+AGG + Chr1:100207237-100207256 MsG0180006104.01.T01:intron 20.0%
!! ATAAGAACATTAAAACTCTT+AGG - Chr1:100200271-100200290 None:intergenic 20.0%
!! ATATATAAGAAGAACAAACA+AGG - Chr1:100207754-100207773 None:intergenic 20.0%
!! ATCTAAGTAAAAACCATAAT+TGG - Chr1:100199688-100199707 None:intergenic 20.0%
!! ATTGTAATAATAGCAAAACT+AGG + Chr1:100202150-100202169 MsG0180006104.01.T01:intron 20.0%
!! CCATTTGACAAAATTATATT+TGG - Chr1:100204363-100204382 None:intergenic 20.0%
!! GAAAAAGTGATAAAGAAATA+AGG + Chr1:100205681-100205700 MsG0180006104.01.T01:intron 20.0%
!! GAATAGAAATCACATAAATT+TGG - Chr1:100208098-100208117 None:intergenic 20.0%
!! GCAAAAAGAAGAAATAAAAA+GGG + Chr1:100207238-100207257 MsG0180006104.01.T01:intron 20.0%
!! TAAAAAAAGTTAAAATTGGC+TGG + Chr1:100200937-100200956 MsG0180006104.01.T01:intron 20.0%
!! TAAGAACATTAAAACTCTTA+GGG - Chr1:100200270-100200289 None:intergenic 20.0%
!! TAATTATTAACATTTGCAAG+AGG + Chr1:100205569-100205588 MsG0180006104.01.T01:intron 20.0%
!! TACAGGATAATTATGATAAT+CGG - Chr1:100201303-100201322 None:intergenic 20.0%
!! TAGGTAACCATTATTTAAAA+TGG - Chr1:100201183-100201202 None:intergenic 20.0%
!! TCATTACATTAAAATCTGAT+TGG + Chr1:100199310-100199329 MsG0180006104.01.T01:intron 20.0%
!! TGTTACTGTTTAAAAACATT+AGG + Chr1:100204572-100204591 MsG0180006104.01.T01:intron 20.0%
!! TTATATTATACCATCAACAT+AGG + Chr1:100205198-100205217 MsG0180006104.01.T01:intron 20.0%
!! TTGAATTAAAACTAACGAAA+AGG - Chr1:100199907-100199926 None:intergenic 20.0%
!! TTTAATGTATGTTCCAATTA+TGG + Chr1:100199672-100199691 MsG0180006104.01.T01:intron 20.0%
!!! AAGAGTTTTAATGTTCTTAT+AGG + Chr1:100200271-100200290 MsG0180006104.01.T01:intron 20.0%
!!! ACAATAACATTGTTGATTTT+TGG + Chr1:100204966-100204985 MsG0180006104.01.T01:intron 20.0%
!!! ATACTTCAAACACAATTTTA+CGG + Chr1:100199556-100199575 MsG0180006104.01.T01:intron 20.0%
!!! ATAGTTGATAAAATAACGTT+TGG + Chr1:100203044-100203063 MsG0180006104.01.T01:intron 20.0%
!!! ATTGTTTTTTTTTGGAGAAA+GGG - Chr1:100200978-100200997 None:intergenic 20.0%
!!! ATTTTAAATAATGGTTACCT+AGG + Chr1:100201182-100201201 MsG0180006104.01.T01:intron 20.0%
!!! ATTTTCTTCTGAAATTTTTC+AGG - Chr1:100200004-100200023 None:intergenic 20.0%
!!! ATTTTTGCAGAAATAACTTA+TGG - Chr1:100206185-100206204 None:intergenic 20.0%
!!! CAATATATTCAATTGTTTTG+CGG - Chr1:100202013-100202032 None:intergenic 20.0%
!!! CCAAATATAATTTTGTCAAA+TGG + Chr1:100204360-100204379 MsG0180006104.01.T01:intron 20.0%
!!! CGTTTTTGAATTAAAACTAA+CGG + Chr1:100200037-100200056 MsG0180006104.01.T01:intron 20.0%
!!! GATTAAGTTATTTGAGTTTA+TGG - Chr1:100207896-100207915 None:intergenic 20.0%
!!! GTTATTTCTGCAAAAATAAA+CGG + Chr1:100206188-100206207 MsG0180006104.01.T01:intron 20.0%
!!! GTTATTTTAAATAAACTTGG+AGG + Chr1:100198763-100198782 MsG0180006104.01.T01:intron 20.0%
!!! GTTCTTACAAGTTTTTTTTT+TGG + Chr1:100199774-100199793 MsG0180006104.01.T01:intron 20.0%
!!! TAATTTTCAATTCAACAGAA+AGG + Chr1:100205899-100205918 MsG0180006104.01.T01:intron 20.0%
!!! TCAAAATAGTTTTTTTGATC+AGG - Chr1:100205345-100205364 None:intergenic 20.0%
!!! TCGTCCTTAATTTTTTTTAT+TGG + Chr1:100201641-100201660 MsG0180006104.01.T01:intron 20.0%
!!! TGTATTTAAAATCCACTTTA+AGG + Chr1:100202911-100202930 MsG0180006104.01.T01:intron 20.0%
!!! TTAATCCTTCATTTTTGAAA+CGG - Chr1:100207302-100207321 None:intergenic 20.0%
!!! TTGCTTTAAATATATTGTGT+GGG + Chr1:100199393-100199412 MsG0180006104.01.T01:intron 20.0%
!!! TTTAGCCTTTTTTTTTTTAC+CGG + Chr1:100200173-100200192 MsG0180006104.01.T01:intron 20.0%
!!! TTTTCTTCTGAAATTTTTCA+GGG - Chr1:100200003-100200022 None:intergenic 20.0%
!!! TTTTTTTTTTTTGTGGTGTT+CGG - Chr1:100204712-100204731 None:intergenic 20.0%
! AAATAAAAAGGGAACTTAGT+GGG + Chr1:100207249-100207268 MsG0180006104.01.T01:intron 25.0%
! AAGAAAATGTTATGCTATGT+AGG + Chr1:100203927-100203946 MsG0180006104.01.T01:intron 25.0%
! AAGTTAATGTTGTCAAACAA+TGG - Chr1:100206814-100206833 None:intergenic 25.0%
! AATAAATCCCAATGACATTT+AGG - Chr1:100202837-100202856 None:intergenic 25.0%
! AATACCCGGTAAAAAAAAAA+AGG - Chr1:100200181-100200200 None:intergenic 25.0%
! AATATAAGATGTGCTTTGAT+TGG - Chr1:100199601-100199620 None:intergenic 25.0%
! AATTGTTAACAAAGTGATCA+AGG - Chr1:100206986-100207005 None:intergenic 25.0%
! ACAAATAAAAATTCCAGTAC+TGG + Chr1:100203675-100203694 MsG0180006104.01.T01:CDS 25.0%
! ACAGCTGATTAAAACTAATT+TGG + Chr1:100200529-100200548 MsG0180006104.01.T01:intron 25.0%
! ACGGTTACAAATTATAACAA+AGG - Chr1:100205545-100205564 None:intergenic 25.0%
! ACTAAAAAATTGTATTGGAG+GGG - Chr1:100202677-100202696 None:intergenic 25.0%
! AGAAAATGTTATGCTATGTA+GGG + Chr1:100203928-100203947 MsG0180006104.01.T01:intron 25.0%
! AGAACAAAGAAAAGATAAGA+AGG - Chr1:100206106-100206125 None:intergenic 25.0%
! AGAACTTAAAGGCAAATATT+AGG - Chr1:100206911-100206930 None:intergenic 25.0%
! AGATTCAATAAGCATGATTT+AGG - Chr1:100203860-100203879 None:intergenic 25.0%
! ATATTGTGTGGGAATAATAA+TGG + Chr1:100199404-100199423 MsG0180006104.01.T01:intron 25.0%
! ATCAATTTCTCAAAGTCAAA+AGG - Chr1:100201095-100201114 None:intergenic 25.0%
! ATCACGTTGAAAATTAAGTA+GGG + Chr1:100207529-100207548 MsG0180006104.01.T01:intron 25.0%
! ATCCATATAGAAACAGATTA+CGG + Chr1:100203971-100203990 MsG0180006104.01.T01:intron 25.0%
! CAAGAGTAGATAAACAATAA+GGG - Chr1:100200609-100200628 None:intergenic 25.0%
! CATAATTTATGGCATAAAAG+AGG + Chr1:100199177-100199196 MsG0180006104.01.T01:intron 25.0%
! CGGTTACAAATTATAACAAA+GGG - Chr1:100205544-100205563 None:intergenic 25.0%
! CTACTTATGAAAATGTCATA+AGG + Chr1:100207828-100207847 MsG0180006104.01.T01:intron 25.0%
! GAAAAAAAAACTAAGCTCTA+AGG + Chr1:100205297-100205316 MsG0180006104.01.T01:intron 25.0%
! GAACTAAAAAATTGTATTGG+AGG - Chr1:100202679-100202698 None:intergenic 25.0%
! GATACTACCTAAATAGTTAA+GGG + Chr1:100200137-100200156 MsG0180006104.01.T01:intron 25.0%
! GATACTACCTAAATAGTTAA+GGG - Chr1:100200156-100200137 None:intergenic 25.0%
! GATTTATGATAGATATGCTA+GGG - Chr1:100207990-100208009 None:intergenic 25.0%
! GTAGTTAATGAAACATGTAT+TGG + Chr1:100202413-100202432 MsG0180006104.01.T01:intron 25.0%
! GTTTATATGAGGATAAAGAT+TGG - Chr1:100203500-100203519 None:intergenic 25.0%
! GTTTATATGATACAAATCGT+CGG - Chr1:100200886-100200905 None:intergenic 25.0%
! TAAAACAAATGTTTGAAGGT+TGG + Chr1:100198704-100198723 MsG0180006104.01.T01:intron 25.0%
! TAACTACAGAGAGAAATTAA+GGG + Chr1:100200077-100200096 MsG0180006104.01.T01:intron 25.0%
! TACCATAGATTATTCAAGTA+GGG - Chr1:100202264-100202283 None:intergenic 25.0%
! TAGTAATATTGCATTAAGCA+GGG + Chr1:100208051-100208070 MsG0180006104.01.T01:intron 25.0%
! TAGTACATTTATAAACCACA+TGG - Chr1:100200490-100200509 None:intergenic 25.0%
! TATATTACTTCCTTAACAGT+GGG + Chr1:100201141-100201160 MsG0180006104.01.T01:intron 25.0%
! TATCACGTTGAAAATTAAGT+AGG + Chr1:100207528-100207547 MsG0180006104.01.T01:intron 25.0%
! TATCTATTTCCGTTTATATG+AGG - Chr1:100203511-100203530 None:intergenic 25.0%
! TATGTAAAAACTTCGATTGA+TGG - Chr1:100205844-100205863 None:intergenic 25.0%
! TATTGTTTATCTACTCTTGA+AGG + Chr1:100200610-100200629 MsG0180006104.01.T01:intron 25.0%
! TCAAGAGTAGATAAACAATA+AGG - Chr1:100200610-100200629 None:intergenic 25.0%
! TCAATTGATATACTTCAAGT+AGG + Chr1:100199358-100199377 MsG0180006104.01.T01:intron 25.0%
! TGAATTGAAAATTACTCAAC+TGG - Chr1:100205893-100205912 None:intergenic 25.0%
! TGATACTACCTAAATAGTTA+AGG + Chr1:100200136-100200155 MsG0180006104.01.T01:intron 25.0%
! TGTTTAAACACCTAAATGAT+TGG - Chr1:100204612-100204631 None:intergenic 25.0%
! TTAAATTTCTGCTAGATTTG+TGG + Chr1:100199049-100199068 MsG0180006104.01.T01:intron 25.0%
! TTAGTAATATTGCATTAAGC+AGG + Chr1:100208050-100208069 MsG0180006104.01.T01:intron 25.0%
! TTATTCACAAGTATATGCAT+TGG + Chr1:100204875-100204894 MsG0180006104.01.T01:intron 25.0%
! TTGATATTATTGTTCAAACG+AGG - Chr1:100206580-100206599 None:intergenic 25.0%
!! AAAAGGCTAAATTGCATTTT+TGG - Chr1:100200164-100200183 None:intergenic 25.0%
!! AACTCAAAAAGACATTTTGT+AGG - Chr1:100200683-100200702 None:intergenic 25.0%
!! ATTGAAAGGTGTACATATTA+AGG + Chr1:100202037-100202056 MsG0180006104.01.T01:intron 25.0%
!! ATTGCATTTAGAATTAAGTG+AGG - Chr1:100199643-100199662 None:intergenic 25.0%
!! ATTTAAAATCCACTTTAAGG+AGG + Chr1:100202914-100202933 MsG0180006104.01.T01:intron 25.0%
!! GGTTTAAAACAAATGTTTGA+AGG + Chr1:100198700-100198719 MsG0180006104.01.T01:intron 25.0%
!! GTAAATATTTGTTTCTTGAG+AGG + Chr1:100204466-100204485 MsG0180006104.01.T01:intron 25.0%
!! GTGTGATGGAAAAATATATA+TGG - Chr1:100202869-100202888 None:intergenic 25.0%
!! GTTGCTTTAAATATATTGTG+TGG + Chr1:100199392-100199411 MsG0180006104.01.T01:intron 25.0%
!! TAACTTGTGTTCTATTGTAT+TGG + Chr1:100204281-100204300 MsG0180006104.01.T01:intron 25.0%
!! TTTGTTATAATTTGTAACCG+TGG + Chr1:100205544-100205563 MsG0180006104.01.T01:intron 25.0%
!! TTTTAAACCTTCTAAGTTCT+CGG - Chr1:100198689-100198708 None:intergenic 25.0%
!! TTTTTCCAAATTTCATGACT+TGG - Chr1:100204225-100204244 None:intergenic 25.0%
!!! ATATTCTTCGGGTTTTTTTT+GGG + Chr1:100207690-100207709 MsG0180006104.01.T01:intron 25.0%
!!! CATTGTTTTTTTTTGGAGAA+AGG - Chr1:100200979-100200998 None:intergenic 25.0%
!!! TTAGCCTTTTTTTTTTTACC+GGG + Chr1:100200174-100200193 MsG0180006104.01.T01:intron 25.0%
!!! TTTAAAAGAGTCTTGTTAAC+TGG + Chr1:100201014-100201033 MsG0180006104.01.T01:intron 25.0%
!!! TTTTGGCTAAATTGCATTTT+TGG + Chr1:100199791-100199810 MsG0180006104.01.T01:intron 25.0%
!!! TTTTTGGTTACAAAGCTAAA+GGG + Chr1:100205248-100205267 MsG0180006104.01.T01:intron 25.0%
!!! TTTTTTGGTTACAAAGCTAA+AGG + Chr1:100205247-100205266 MsG0180006104.01.T01:intron 25.0%
!!! TTTTTTTTTTTGTGGTGTTC+GGG - Chr1:100204711-100204730 None:intergenic 25.0%
AAACAAAGCCTAAATGTCAT+TGG + Chr1:100202826-100202845 MsG0180006104.01.T01:intron 30.0%
AAACAGCTCAAAGAACTTAA+AGG - Chr1:100206922-100206941 None:intergenic 30.0%
AAATATAAACCCTCCTCATT+TGG - Chr1:100202703-100202722 None:intergenic 30.0%
AACAAAGACGACAACATTTA+CGG + Chr1:100200855-100200874 MsG0180006104.01.T01:intron 30.0%
AACAAAGCCTAAATGTCATT+GGG + Chr1:100202827-100202846 MsG0180006104.01.T01:intron 30.0%
AAGAAGAACAAACAAGGTTT+CGG - Chr1:100207748-100207767 None:intergenic 30.0%
AATACCCATTTAGTACACAA+TGG - Chr1:100206750-100206769 None:intergenic 30.0%
AATATAAACCCTCCTCATTT+GGG - Chr1:100202702-100202721 None:intergenic 30.0%
AATGTCATTGGGATTTATTG+TGG + Chr1:100202838-100202857 MsG0180006104.01.T01:intron 30.0%
AATGTTTGAAGGTTGGAAAA+AGG + Chr1:100198711-100198730 MsG0180006104.01.T01:intron 30.0%
AATTGATAGATACCTGAAAG+AGG - Chr1:100201622-100201641 None:intergenic 30.0%
AATTTCACCATTCATCTATG+AGG + Chr1:100205052-100205071 MsG0180006104.01.T01:intron 30.0%
ACAACATCGTCTTGTATTAA+TGG + Chr1:100203788-100203807 MsG0180006104.01.T01:CDS 30.0%
ACATTTATAAACCACATGGA+AGG - Chr1:100200486-100200505 None:intergenic 30.0%
ACTAACCGTTTCAAAAATGA+AGG + Chr1:100207294-100207313 MsG0180006104.01.T01:intron 30.0%
ACTATAACACTATAGCATAG+CGG - Chr1:100206357-100206376 None:intergenic 30.0%
ACTTCAGTGTAACAATAGAA+GGG + Chr1:100208586-100208605 MsG0180006104.01.T01:CDS 30.0%
ACTTGTAAGAACATGTTCTA+CGG - Chr1:100199766-100199785 None:intergenic 30.0%
AGGAAATGGAATCTGTATTT+GGG + Chr1:100208196-100208215 MsG0180006104.01.T01:intron 30.0%
AGTAATATTGCATTAAGCAG+GGG + Chr1:100208052-100208071 MsG0180006104.01.T01:intron 30.0%
AGTATTTATTCAGGGATTGT+TGG - Chr1:100207919-100207938 None:intergenic 30.0%
AGTGGAAGAAATAATGACAT+TGG - Chr1:100202760-100202779 None:intergenic 30.0%
AGTTTACCTTATTGAGTTCT+TGG - Chr1:100206079-100206098 None:intergenic 30.0%
ATAATGCATTAAGGGGAAAA+GGG - Chr1:100204186-100204205 None:intergenic 30.0%
ATACGCTATTTAGTACACAA+TGG - Chr1:100206403-100206422 None:intergenic 30.0%
ATCAAAATGACTATTTGGAC+AGG + Chr1:100200451-100200470 MsG0180006104.01.T01:intron 30.0%
ATCTAAACTGAATCAAGTAC+TGG - Chr1:100204058-100204077 None:intergenic 30.0%
ATCTGTGATTCCATATTCTT+CGG + Chr1:100207678-100207697 MsG0180006104.01.T01:intron 30.0%
ATGCATAATATATGCAAAGC+TGG + Chr1:100204677-100204696 MsG0180006104.01.T01:intron 30.0%
ATTATACCATCAACATAGGT+TGG + Chr1:100205202-100205221 MsG0180006104.01.T01:intron 30.0%
ATTCAAGTAGGGTAAATGAA+GGG - Chr1:100202253-100202272 None:intergenic 30.0%
ATTTATAAACCACATGGAAG+GGG - Chr1:100200484-100200503 None:intergenic 30.0%
ATTTCACCATTCATCTATGA+GGG + Chr1:100205053-100205072 MsG0180006104.01.T01:intron 30.0%
CAAAAAAAACCCGAAGAATA+TGG - Chr1:100207691-100207710 None:intergenic 30.0%
CAAAGAAAAGATAAGAAGGA+AGG - Chr1:100206102-100206121 None:intergenic 30.0%
CAAAGTAAATCTTGGAAAGA+AGG + Chr1:100208401-100208420 MsG0180006104.01.T01:CDS 30.0%
CAGTACTTGCATATTGAATT+TGG + Chr1:100204027-100204046 MsG0180006104.01.T01:intron 30.0%
CATTTATAAACCACATGGAA+GGG - Chr1:100200485-100200504 None:intergenic 30.0%
CCAAGATGATAAGAAAATGA+TGG - Chr1:100203139-100203158 None:intergenic 30.0%
CGATACTACCTAAATAGTTA+AGG - Chr1:100199819-100199838 None:intergenic 30.0%
CGCTACATAAATTAGCATAA+TGG + Chr1:100202114-100202133 MsG0180006104.01.T01:intron 30.0%
CTACCATAGATTATTCAAGT+AGG - Chr1:100202265-100202284 None:intergenic 30.0%
CTATATTACTTCCTTAACAG+TGG + Chr1:100201140-100201159 MsG0180006104.01.T01:intron 30.0%
CTATTGTATTGGATTCAAGA+CGG + Chr1:100204292-100204311 MsG0180006104.01.T01:intron 30.0%
CTATTTAGGTAGTATCACTT+TGG - Chr1:100200133-100200152 None:intergenic 30.0%
GAAAATGAGGAAAATACAAC+AGG + Chr1:100198931-100198950 MsG0180006104.01.T01:intron 30.0%
GAAATAAAAAGGGAACTTAG+TGG + Chr1:100207248-100207267 MsG0180006104.01.T01:intron 30.0%
GAAGATAGCATTTGTTTGAT+TGG - Chr1:100201543-100201562 None:intergenic 30.0%
GAAGATTTACTTTCTCTTCA+TGG + Chr1:100202391-100202410 MsG0180006104.01.T01:intron 30.0%
GCTAGAGTAGTATTTATTCA+GGG - Chr1:100207927-100207946 None:intergenic 30.0%
GGAAATCGTTCAAAGAATTT+AGG - Chr1:100206890-100206909 None:intergenic 30.0%
GGATTTATGATAGATATGCT+AGG - Chr1:100207991-100208010 None:intergenic 30.0%
GGGGAACTAAAAAATTGTAT+TGG - Chr1:100202682-100202701 None:intergenic 30.0%
GGTTGTGTTTGGTTAAAAAT+TGG + Chr1:100207555-100207574 MsG0180006104.01.T01:intron 30.0%
GTAACTACAGAGAGAAATTA+AGG + Chr1:100200076-100200095 MsG0180006104.01.T01:intron 30.0%
GTATTTATTCAGGGATTGTT+GGG - Chr1:100207918-100207937 None:intergenic 30.0%
GTGGAAGAAATAATGACATT+GGG - Chr1:100202759-100202778 None:intergenic 30.0%
GTTTGGTTAAAAATTGGAGA+GGG + Chr1:100207561-100207580 MsG0180006104.01.T01:intron 30.0%
TAATGACAGACTAATCTGAA+TGG + Chr1:100205026-100205045 MsG0180006104.01.T01:intron 30.0%
TAATGTTCTTATAGGTCGTT+TGG + Chr1:100200279-100200298 MsG0180006104.01.T01:intron 30.0%
TACCCTACTTGAATAATCTA+TGG + Chr1:100202259-100202278 MsG0180006104.01.T01:intron 30.0%
TATTCAAGTAGGGTAAATGA+AGG - Chr1:100202254-100202273 None:intergenic 30.0%
TCAAACCAAGTCATGAAATT+TGG + Chr1:100204217-100204236 MsG0180006104.01.T01:intron 30.0%
TCAACTATAACATAGGCAAA+TGG - Chr1:100203032-100203051 None:intergenic 30.0%
TCACGTTGAAAATTAAGTAG+GGG + Chr1:100207530-100207549 MsG0180006104.01.T01:intron 30.0%
TGCATAATATATGCAAAGCT+GGG + Chr1:100204678-100204697 MsG0180006104.01.T01:intron 30.0%
TGCTAGAGTAGTATTTATTC+AGG - Chr1:100207928-100207947 None:intergenic 30.0%
TGGAAGAAATAATGACATTG+GGG - Chr1:100202758-100202777 None:intergenic 30.0%
TGTGTTGAAAGGTTTCATTT+GGG - Chr1:100206959-100206978 None:intergenic 30.0%
TGTTTGGTTAAAAATTGGAG+AGG + Chr1:100207560-100207579 MsG0180006104.01.T01:intron 30.0%
TTAGCCAATCAAATGGAAAA+AGG + Chr1:100208438-100208457 MsG0180006104.01.T01:CDS 30.0%
TTATACCATCAACATAGGTT+GGG + Chr1:100205203-100205222 MsG0180006104.01.T01:intron 30.0%
TTCAATCCAAGAACTCAATA+AGG + Chr1:100206070-100206089 MsG0180006104.01.T01:intron 30.0%
TTCTCATATAAACCTTCCTT+TGG - Chr1:100203887-100203906 None:intergenic 30.0%
TTGTGTTGAAAGGTTTCATT+TGG - Chr1:100206960-100206979 None:intergenic 30.0%
TTTGAACAAACCACTATTTC+TGG - Chr1:100206647-100206666 None:intergenic 30.0%
TTTGGTATTAGCCAATCAAA+TGG + Chr1:100208431-100208450 MsG0180006104.01.T01:CDS 30.0%
! AAATATGTCTCAGAGCTTTT+GGG + Chr1:100203762-100203781 MsG0180006104.01.T01:CDS 30.0%
! ATGATGCGTCTTTTATGTTT+AGG + Chr1:100206139-100206158 MsG0180006104.01.T01:intron 30.0%
! ATTTTCTTATCATCTTGGAG+GGG + Chr1:100203141-100203160 MsG0180006104.01.T01:intron 30.0%
! CATTTTCTTATCATCTTGGA+GGG + Chr1:100203140-100203159 MsG0180006104.01.T01:intron 30.0%
! CCATCATTTTCTTATCATCT+TGG + Chr1:100203136-100203155 MsG0180006104.01.T01:intron 30.0%
! TAAGACTTAGAATTTTCACC+CGG - Chr1:100204135-100204154 None:intergenic 30.0%
! TATTTTCCATTTCCCAGAAT+AGG + Chr1:100203452-100203471 MsG0180006104.01.T01:intron 30.0%
! TCATTTTCTTATCATCTTGG+AGG + Chr1:100203139-100203158 MsG0180006104.01.T01:intron 30.0%
! TCCTCCATTTCTTTTATCTT+GGG + Chr1:100201915-100201934 MsG0180006104.01.T01:CDS 30.0%
! TGATGCGTCTTTTATGTTTA+GGG + Chr1:100206140-100206159 MsG0180006104.01.T01:intron 30.0%
! TGTTCATATAGTCTTGAACA+TGG - Chr1:100206551-100206570 None:intergenic 30.0%
! TTCCTCATTTTCAGTATAGT+TGG - Chr1:100198923-100198942 None:intergenic 30.0%
! TTGAAGGCATAATGCATTAA+GGG - Chr1:100204194-100204213 None:intergenic 30.0%
! TTTGAAGGCATAATGCATTA+AGG - Chr1:100204195-100204214 None:intergenic 30.0%
! TTTTGGTCCCTTAACTATTT+AGG + Chr1:100199808-100199827 MsG0180006104.01.T01:intron 30.0%
! TTTTGGTCCCTTAACTATTT+AGG - Chr1:100199827-100199808 None:intergenic 30.0%
!! AGGTTTGTTTGTTTTCTCTT+TGG + Chr1:100201753-100201772 MsG0180006104.01.T01:intron 30.0%
!! TCTTTTGAATTGACTCATAC+TGG + Chr1:100208306-100208325 MsG0180006104.01.T01:CDS 30.0%
!! TGTTTTCTCTTTGGAAGTTT+TGG + Chr1:100201762-100201781 MsG0180006104.01.T01:intron 30.0%
!! TTTTCTTTGTTCTGCTACTT+AGG + Chr1:100206113-100206132 MsG0180006104.01.T01:intron 30.0%
!! TTTTGGTTACAAAGCTAAAG+GGG + Chr1:100205249-100205268 MsG0180006104.01.T01:intron 30.0%
!!! ATTTTTTAGTTCCCCAAATG+AGG + Chr1:100202687-100202706 MsG0180006104.01.T01:intron 30.0%
!!! CATATTCTTCGGGTTTTTTT+TGG + Chr1:100207689-100207708 MsG0180006104.01.T01:intron 30.0%
!!! TTTTTTTTTCCTTTGGGGTT+TGG + Chr1:100198866-100198885 MsG0180006104.01.T01:intron 30.0%
!!! TTTTTTTTTTGTGGTGTTCG+GGG - Chr1:100204710-100204729 None:intergenic 30.0%
AAAATGACTATTTGGACAGG+TGG + Chr1:100200454-100200473 MsG0180006104.01.T01:intron 35.0%
AAACGAGGTGACAATGAAAT+AGG + Chr1:100206462-100206481 MsG0180006104.01.T01:intron 35.0%
AAAGAGGAATCAAAAAGGAG+GGG - Chr1:100201606-100201625 None:intergenic 35.0%
AACATGGCTGCATCAATATT+GGG - Chr1:100206535-100206554 None:intergenic 35.0%
AACTCAATCTCAAACTCTTC+TGG - Chr1:100203275-100203294 None:intergenic 35.0%
AACTTCTCAACAAATTGTCG+CGG - Chr1:100203320-100203339 None:intergenic 35.0%
AACTTGCAATTCAAGCATCA+AGG + Chr1:100201887-100201906 MsG0180006104.01.T01:CDS 35.0%
AAGAAATAATGACATTGGGG+AGG - Chr1:100202755-100202774 None:intergenic 35.0%
AAGAATTAAGAGGGTCTTCT+TGG - Chr1:100200778-100200797 None:intergenic 35.0%
AAGTTCGTTGATGTCATAGA+AGG + Chr1:100200423-100200442 MsG0180006104.01.T01:intron 35.0%
AATAAACTTGGAGGTGAAGA+TGG + Chr1:100198772-100198791 MsG0180006104.01.T01:intron 35.0%
ACCTGAAAGAGGAATCAAAA+AGG - Chr1:100201611-100201630 None:intergenic 35.0%
ACGGAAATAGATATCTGTAC+TGG + Chr1:100203518-100203537 MsG0180006104.01.T01:intron 35.0%
ACGGAATAAGCAATTTAGCA+TGG - Chr1:100208173-100208192 None:intergenic 35.0%
ACGGTTCATTAATAAAGAGC+AGG + Chr1:100199575-100199594 MsG0180006104.01.T01:intron 35.0%
ACTATAGAACTGTAGCATAG+TGG - Chr1:100206672-100206691 None:intergenic 35.0%
ACTCAATCTCAAACTCTTCT+GGG - Chr1:100203274-100203293 None:intergenic 35.0%
ACTTCTTTCCGTTACACATT+TGG + Chr1:100199880-100199899 MsG0180006104.01.T01:intron 35.0%
ACTTGCAATTCAAGCATCAA+GGG + Chr1:100201888-100201907 MsG0180006104.01.T01:CDS 35.0%
AGAAACGATGACTAAACTTC+TGG - Chr1:100202972-100202991 None:intergenic 35.0%
AGAAATAATGACATTGGGGA+GGG - Chr1:100202754-100202773 None:intergenic 35.0%
AGAAATGAAGTCGGGTTATT+TGG + Chr1:100201255-100201274 MsG0180006104.01.T01:intron 35.0%
AGAAGTTTAGTCATCGTTTC+TGG + Chr1:100202971-100202990 MsG0180006104.01.T01:intron 35.0%
AGAGTTAGAAAAGCTATGTG+AGG + Chr1:100203596-100203615 MsG0180006104.01.T01:CDS 35.0%
AGATGATTCTTATATGTCCC+GGG + Chr1:100204114-100204133 MsG0180006104.01.T01:intron 35.0%
AGGAAAAATGAGATAGCAGT+AGG + Chr1:100198951-100198970 MsG0180006104.01.T01:intron 35.0%
AGTCATGAATAACAGAGAAG+AGG - Chr1:100206043-100206062 None:intergenic 35.0%
ATAAATCCATTCACATGCCT+AGG + Chr1:100208003-100208022 MsG0180006104.01.T01:intron 35.0%
ATAGACAACGACAAGAGAAA+GGG + Chr1:100205950-100205969 MsG0180006104.01.T01:intron 35.0%
ATATAAACCCTCCTCATTTG+GGG - Chr1:100202701-100202720 None:intergenic 35.0%
ATCAAGGAGATTGTGTTGAA+AGG - Chr1:100206970-100206989 None:intergenic 35.0%
ATCTCTTATAGTTCTTCCGT+GGG + Chr1:100200644-100200663 MsG0180006104.01.T01:intron 35.0%
ATGAAATAGGAGACGATCAA+AGG + Chr1:100206475-100206494 MsG0180006104.01.T01:intron 35.0%
ATTCCATTGTGCCATAACAT+AGG + Chr1:100208522-100208541 MsG0180006104.01.T01:CDS 35.0%
ATTCTGAGTTATGAAGATCG+CGG + Chr1:100203111-100203130 MsG0180006104.01.T01:intron 35.0%
ATTTACTTTGCAAACAGCAG+TGG - Chr1:100208391-100208410 None:intergenic 35.0%
CAGATGATTCTTATATGTCC+CGG + Chr1:100204113-100204132 MsG0180006104.01.T01:intron 35.0%
CAGGAAATGGAATCTGTATT+TGG + Chr1:100208195-100208214 MsG0180006104.01.T01:intron 35.0%
CATAAGATGTCTCAATTGCA+TGG + Chr1:100199464-100199483 MsG0180006104.01.T01:intron 35.0%
CATAATGCATTAAGGGGAAA+AGG - Chr1:100204187-100204206 None:intergenic 35.0%
CATATAGAAACAGATTACGG+CGG + Chr1:100203974-100203993 MsG0180006104.01.T01:intron 35.0%
CATGACAATGAAACACATGA+TGG - Chr1:100207133-100207152 None:intergenic 35.0%
CATGCCCAAGATAAAAGAAA+TGG - Chr1:100201922-100201941 None:intergenic 35.0%
CATGCTAATGTTCCTATTCT+GGG - Chr1:100203467-100203486 None:intergenic 35.0%
CGATCCACAGTTAACAATAT+TGG - Chr1:100206624-100206643 None:intergenic 35.0%
CTATCTTCTAAGTCTTCTTC+TGG + Chr1:100201555-100201574 MsG0180006104.01.T01:intron 35.0%
CTATTACTGATGATATTGCC+AGG + Chr1:100201814-100201833 MsG0180006104.01.T01:intron 35.0%
CTCGATACTTGTAATCGTAA+TGG - Chr1:100202941-100202960 None:intergenic 35.0%
CTTAGGAAGGAGAGAATATA+GGG + Chr1:100202499-100202518 MsG0180006104.01.T01:intron 35.0%
CTTATTGAATCTAGCACCAA+AGG + Chr1:100203868-100203887 MsG0180006104.01.T01:intron 35.0%
CTTCAGTGTAACAATAGAAG+GGG + Chr1:100208587-100208606 MsG0180006104.01.T01:CDS 35.0%
GAAAAGGACCAAATGTGTAA+CGG - Chr1:100199891-100199910 None:intergenic 35.0%
GAAAGAGGAATCAAAAAGGA+GGG - Chr1:100201607-100201626 None:intergenic 35.0%
GACACCATTGTGTACTAAAT+GGG + Chr1:100206743-100206762 MsG0180006104.01.T01:CDS 35.0%
GACTTCAGTGTAACAATAGA+AGG + Chr1:100208585-100208604 MsG0180006104.01.T01:CDS 35.0%
GAGCAAAGAAGTCAAGTATT+TGG + Chr1:100198600-100198619 MsG0180006104.01.T01:CDS 35.0%
GATGATATGAGATGAAGAAG+AGG - Chr1:100199957-100199976 None:intergenic 35.0%
GATTCTGTTGTTAAGGTTGA+TGG - Chr1:100199981-100200000 None:intergenic 35.0%
GCTGTTTGCAAAGTAAATCT+TGG + Chr1:100208393-100208412 MsG0180006104.01.T01:CDS 35.0%
GGAAATGGAATCTGTATTTG+GGG + Chr1:100208197-100208216 MsG0180006104.01.T01:intron 35.0%
GGTAAATGAAGGGTTACTAA+CGG - Chr1:100202243-100202262 None:intergenic 35.0%
GTAATATTGCATTAAGCAGG+GGG + Chr1:100208053-100208072 MsG0180006104.01.T01:intron 35.0%
GTCTATGATGCAATTTGAGT+GGG - Chr1:100205936-100205955 None:intergenic 35.0%
GTGTACTAAATAGCGTATTG+CGG + Chr1:100206405-100206424 MsG0180006104.01.T01:intron 35.0%
GTGTGAAATAGAAGCTATAG+CGG - Chr1:100206381-100206400 None:intergenic 35.0%
GTTGAAAATTAAGTAGGGGA+TGG + Chr1:100207534-100207553 MsG0180006104.01.T01:intron 35.0%
GTTTGCAAAAAAAACGCAAG+TGG - Chr1:100202778-100202797 None:intergenic 35.0%
TAAATTGCTTATTCCGTCTC+AGG + Chr1:100208176-100208195 MsG0180006104.01.T01:intron 35.0%
TATCAACTGAACTAAGCTCA+CGG - Chr1:100204651-100204670 None:intergenic 35.0%
TCATGTTGTTCGAAGAATTG+TGG + Chr1:100205978-100205997 MsG0180006104.01.T01:intron 35.0%
TCCACAGTTAACAATATTGG+TGG - Chr1:100206621-100206640 None:intergenic 35.0%
TCCACCAATATTGTTAACTG+TGG + Chr1:100206617-100206636 MsG0180006104.01.T01:intron 35.0%
TCTGTGATTCCATATTCTTC+GGG + Chr1:100207679-100207698 MsG0180006104.01.T01:intron 35.0%
TCTTAGGAAGGAGAGAATAT+AGG + Chr1:100202498-100202517 MsG0180006104.01.T01:intron 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - Chr1:100207410-100207429 None:intergenic 35.0%
TGAAAGAGGAATCAAAAAGG+AGG - Chr1:100201608-100201627 None:intergenic 35.0%
TGAAATCCATGGAAGAAGTA+TGG + Chr1:100198361-100198380 MsG0180006104.01.T01:CDS 35.0%
TGACACCATTGTGTACTAAA+TGG + Chr1:100206742-100206761 MsG0180006104.01.T01:CDS 35.0%
TGACTCATACTGGAAATTCA+GGG + Chr1:100208316-100208335 MsG0180006104.01.T01:CDS 35.0%
TGCCAACTATACTGAAAATG+AGG + Chr1:100198918-100198937 MsG0180006104.01.T01:intron 35.0%
TGTACAATACACCGAATAGT+GGG - Chr1:100207384-100207403 None:intergenic 35.0%
TGTCTATGATGCAATTTGAG+TGG - Chr1:100205937-100205956 None:intergenic 35.0%
TTCTTGGTTGAGGTAAAATC+TGG + Chr1:100198636-100198655 MsG0180006104.01.T01:CDS 35.0%
TTGACTCATACTGGAAATTC+AGG + Chr1:100208315-100208334 MsG0180006104.01.T01:CDS 35.0%
TTGCTATGGATGATTCTGAA+AGG + Chr1:100198436-100198455 MsG0180006104.01.T01:CDS 35.0%
TTGTTCAAGCAAGAACAATG+TGG + Chr1:100200581-100200600 MsG0180006104.01.T01:intron 35.0%
TTTCAGAATCATCCATAGCA+AGG - Chr1:100198437-100198456 None:intergenic 35.0%
TTTCAGGGATTCTGTTGTTA+AGG - Chr1:100199988-100200007 None:intergenic 35.0%
! AAACCAACTCATGTTGGTTA+TGG - Chr1:100199437-100199456 None:intergenic 35.0%
! AAATTGTATTGGAGGGGTTT+TGG - Chr1:100202671-100202690 None:intergenic 35.0%
! AAGACTTAGAATTTTCACCC+GGG - Chr1:100204134-100204153 None:intergenic 35.0%
! AATGTTCCTATTCTGGGAAA+TGG - Chr1:100203461-100203480 None:intergenic 35.0%
! AATTGTATTGGAGGGGTTTT+GGG - Chr1:100202670-100202689 None:intergenic 35.0%
! ATGTGTAACGGAAAGAAGTT+AGG - Chr1:100199879-100199898 None:intergenic 35.0%
! ATGTTAAGGAGTGTGTTTCT+CGG + Chr1:100205706-100205725 MsG0180006104.01.T01:intron 35.0%
! ATTCAGCTTTAGCCAGTATA+AGG + Chr1:100203826-100203845 MsG0180006104.01.T01:CDS 35.0%
! CAGCTGCTTTATATCCAAAT+CGG - Chr1:100203566-100203585 None:intergenic 35.0%
! CATTTCTTTTATCTTGGGCA+TGG + Chr1:100201920-100201939 MsG0180006104.01.T01:CDS 35.0%
! GAAATATGTCTCAGAGCTTT+TGG + Chr1:100203761-100203780 MsG0180006104.01.T01:CDS 35.0%
! GGATTTGAGATTGAATCATG+AGG + Chr1:100208563-100208582 MsG0180006104.01.T01:CDS 35.0%
! GTCCTCCATTTCTTTTATCT+TGG + Chr1:100201914-100201933 MsG0180006104.01.T01:CDS 35.0%
! GTCTCCTTTTTCCATTTGAT+TGG - Chr1:100208445-100208464 None:intergenic 35.0%
! TACACAATGGTGTCAAATAG+AGG - Chr1:100206737-100206756 None:intergenic 35.0%
! TGAAGGCATAATGCATTAAG+GGG - Chr1:100204193-100204212 None:intergenic 35.0%
! TGAGCTTAGTTCAGTTGATA+AGG + Chr1:100204651-100204670 MsG0180006104.01.T01:intron 35.0%
! TGTGTAACGGAAAGAAGTTA+GGG - Chr1:100199878-100199897 None:intergenic 35.0%
! TGTGTACTAAATGGGTATTG+CGG + Chr1:100206751-100206770 MsG0180006104.01.T01:intron 35.0%
! TTTTACCTCAACCAAGAACT+TGG - Chr1:100198634-100198653 None:intergenic 35.0%
!! AAACTAAGCTCTAAGGAAAG+AGG + Chr1:100205304-100205323 MsG0180006104.01.T01:intron 35.0%
!! CACAGTTCTAAGAACTTTAG+AGG - Chr1:100206847-100206866 None:intergenic 35.0%
!! CAGAAGATCCTTTTTGATTG+AGG - Chr1:100206018-100206037 None:intergenic 35.0%
!! CTCTAAAGTTCTTAGAACTG+TGG + Chr1:100206845-100206864 MsG0180006104.01.T01:intron 35.0%
!! GACATTTTAACAAACCTCGA+GGG + Chr1:100207591-100207610 MsG0180006104.01.T01:intron 35.0%
!! TCCTTTTTGATTCCTCTTTC+AGG + Chr1:100201607-100201626 MsG0180006104.01.T01:intron 35.0%
!! TGACATTTTAACAAACCTCG+AGG + Chr1:100207590-100207609 MsG0180006104.01.T01:intron 35.0%
!! TGACTTGGTTTGAACTTTGA+AGG - Chr1:100204210-100204229 None:intergenic 35.0%
!! TGGAAAGAAGGTGTTTGATT+TGG + Chr1:100208413-100208432 MsG0180006104.01.T01:CDS 35.0%
!!! GAGAAGTGTTCACTTTTACT+TGG + Chr1:100203902-100203921 MsG0180006104.01.T01:intron 35.0%
!!! GTTCTCTTGCTACTTTCTTT+TGG - Chr1:100208366-100208385 None:intergenic 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + Chr1:100207409-100207428 MsG0180006104.01.T01:intron 35.0%
AAAGCGCGTTCTTTCATCTT+GGG + Chr1:100203226-100203245 MsG0180006104.01.T01:intron 40.0%
AAATAATGACATTGGGGAGG+GGG - Chr1:100202752-100202771 None:intergenic 40.0%
AAATTCAGGGGAAGCTCAAA+TGG + Chr1:100208329-100208348 MsG0180006104.01.T01:CDS 40.0%
AACGAACCCTCATAGATGAA+TGG - Chr1:100205062-100205081 None:intergenic 40.0%
AAGGAATACAGCTGGGATAT+GGG + Chr1:100198492-100198511 MsG0180006104.01.T01:CDS 40.0%
AAGTTTGATGCTCTGCACAT+AGG + Chr1:100201856-100201875 MsG0180006104.01.T01:CDS 40.0%
AATAATGGTTACCTAGGCGA+CGG + Chr1:100201188-100201207 MsG0180006104.01.T01:intron 40.0%
AATGCCCTTAATACAGTGCA+TGG - Chr1:100198899-100198918 None:intergenic 40.0%
ACACATGATGGCAAAGCTAT+TGG - Chr1:100207121-100207140 None:intergenic 40.0%
ACAGATTCCATTTCCTGAGA+CGG - Chr1:100208192-100208211 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG - Chr1:100207416-100207435 None:intergenic 40.0%
ACATGGCTGCATCAATATTG+GGG - Chr1:100206534-100206553 None:intergenic 40.0%
ACTGGTTAAGGAATCCCAAA+AGG + Chr1:100201048-100201067 MsG0180006104.01.T01:intron 40.0%
AGATACCCAACCTATGTTGA+TGG - Chr1:100205211-100205230 None:intergenic 40.0%
AGCTGAATGTTTCTCGATCA+TGG - Chr1:100203814-100203833 None:intergenic 40.0%
AGTAAACTGTAGAGAAGCAG+TGG + Chr1:100201230-100201249 MsG0180006104.01.T01:intron 40.0%
AGTTCTGCTATGCTAAAACG+AGG + Chr1:100206447-100206466 MsG0180006104.01.T01:intron 40.0%
AGTTTATGTGTGAACCACCT+AGG - Chr1:100208023-100208042 None:intergenic 40.0%
ATCAACTGAACTAAGCTCAC+GGG - Chr1:100204650-100204669 None:intergenic 40.0%
ATCTTGTTCCACTGCTTTCT+TGG - Chr1:100198533-100198552 None:intergenic 40.0%
ATGAAGAAGAGGAGAAGAAG+AGG - Chr1:100199946-100199965 None:intergenic 40.0%
ATGTTTCGAGATGACACATG+AGG - Chr1:100208276-100208295 None:intergenic 40.0%
CAGATCACATTAGCGACTAT+GGG - Chr1:100203206-100203225 None:intergenic 40.0%
CAGCCTCTTGTGTAAAAACA+GGG - Chr1:100207415-100207434 None:intergenic 40.0%
CATAGACAACGACAAGAGAA+AGG + Chr1:100205949-100205968 MsG0180006104.01.T01:intron 40.0%
CATCTCTTATAGTTCTTCCG+TGG + Chr1:100200643-100200662 MsG0180006104.01.T01:intron 40.0%
CATGTGTCATCTCGAAACAT+AGG + Chr1:100208276-100208295 MsG0180006104.01.T01:CDS 40.0%
CCAGAATAGGAACATTAGCA+TGG + Chr1:100203465-100203484 MsG0180006104.01.T01:intron 40.0%
CCATGCTAATGTTCCTATTC+TGG - Chr1:100203468-100203487 None:intergenic 40.0%
CTACCATAACCAACATGAGT+TGG + Chr1:100199431-100199450 MsG0180006104.01.T01:intron 40.0%
CTATGACATCAACGAACTTC+AGG - Chr1:100200422-100200441 None:intergenic 40.0%
CTGCATCTCCTCAATCAAAA+AGG + Chr1:100206007-100206026 MsG0180006104.01.T01:intron 40.0%
GAAATAATGACATTGGGGAG+GGG - Chr1:100202753-100202772 None:intergenic 40.0%
GAACATGGCTGCATCAATAT+TGG - Chr1:100206536-100206555 None:intergenic 40.0%
GAAGAAACCATTATATCCCG+CGG - Chr1:100206329-100206348 None:intergenic 40.0%
GACTCATACTGGAAATTCAG+GGG + Chr1:100208317-100208336 MsG0180006104.01.T01:CDS 40.0%
GATAATCGGATCCGATGAAT+GGG - Chr1:100201289-100201308 None:intergenic 40.0%
GATGTCACGATTATTGTGTG+TGG + Chr1:100207459-100207478 MsG0180006104.01.T01:intron 40.0%
GATTGTGAACTTCTCCACTT+TGG + Chr1:100201423-100201442 MsG0180006104.01.T01:intron 40.0%
GCCCAAGATAAAAGAAATGG+AGG - Chr1:100201919-100201938 None:intergenic 40.0%
GCTTACTGTTATAAGCTCTC+TGG - Chr1:100207802-100207821 None:intergenic 40.0%
GGAAAGTGGTAGAAGATTTG+AGG + Chr1:100201341-100201360 MsG0180006104.01.T01:intron 40.0%
GGGATATGGGAAATAATCAC+AGG + Chr1:100198505-100198524 MsG0180006104.01.T01:CDS 40.0%
GGTTCCTTATTGTGGTAACA+TGG + Chr1:100203247-100203266 MsG0180006104.01.T01:intron 40.0%
GTGTACAATACACCGAATAG+TGG - Chr1:100207385-100207404 None:intergenic 40.0%
GTGTCAAATAGAGGCTATAG+CGG - Chr1:100206728-100206747 None:intergenic 40.0%
TAAAAAGGGAACTTAGTGGG+TGG + Chr1:100207252-100207271 MsG0180006104.01.T01:intron 40.0%
TAGAGAAAGCCAAGAAGAAG+TGG + Chr1:100198800-100198819 MsG0180006104.01.T01:intron 40.0%
TATCCTGTAGTAGCTAAACG+AGG + Chr1:100201314-100201333 MsG0180006104.01.T01:intron 40.0%
TCAAGACGGTCTTGAAAGTA+AGG + Chr1:100204306-100204325 MsG0180006104.01.T01:intron 40.0%
TCACTCAAACCAACTCATGT+TGG - Chr1:100199443-100199462 None:intergenic 40.0%
TCAGATCACATTAGCGACTA+TGG - Chr1:100203207-100203226 None:intergenic 40.0%
TCATCTTGGGTTCCTTATTG+TGG + Chr1:100203239-100203258 MsG0180006104.01.T01:intron 40.0%
TCCAGGCGTTTCAAAAATGA+AGG + Chr1:100207437-100207456 MsG0180006104.01.T01:intron 40.0%
TCTTCTAAGTCTTCTTCTGG+AGG + Chr1:100201558-100201577 MsG0180006104.01.T01:intron 40.0%
TGATAATCGGATCCGATGAA+TGG - Chr1:100201290-100201309 None:intergenic 40.0%
TGCTAGATTTGTGGAGTTAG+AGG + Chr1:100199058-100199077 MsG0180006104.01.T01:intron 40.0%
TGGATTCATCAAAATCCGCT+AGG + Chr1:100202194-100202213 MsG0180006104.01.T01:intron 40.0%
TGGTAGAAGATTTGAGGATG+CGG + Chr1:100201347-100201366 MsG0180006104.01.T01:intron 40.0%
TGGTCCATGCACTGTATTAA+GGG + Chr1:100198892-100198911 MsG0180006104.01.T01:intron 40.0%
TGTCAAATAGAGGCTATAGC+GGG - Chr1:100206727-100206746 None:intergenic 40.0%
TGTTAATGCAAGCGATGACA+AGG + Chr1:100198473-100198492 MsG0180006104.01.T01:CDS 40.0%
TGTTATGGCACAATGGAATC+AGG - Chr1:100208521-100208540 None:intergenic 40.0%
TTAATACAGTGCATGGACCA+AGG - Chr1:100198892-100198911 None:intergenic 40.0%
TTACTGATGATATTGCCAGG+TGG + Chr1:100201817-100201836 MsG0180006104.01.T01:intron 40.0%
TTCTCACTAACAGCGTTAAC+AGG - Chr1:100206267-100206286 None:intergenic 40.0%
TTGAATCTAGCACCAAAGGA+AGG + Chr1:100203872-100203891 MsG0180006104.01.T01:intron 40.0%
TTGGTCCATGCACTGTATTA+AGG + Chr1:100198891-100198910 MsG0180006104.01.T01:intron 40.0%
TTTAACAGAGTGCAGACAGT+GGG + Chr1:100207498-100207517 MsG0180006104.01.T01:intron 40.0%
TTTCATTTGGGCCATCTTAG+AGG - Chr1:100206947-100206966 None:intergenic 40.0%
TTTCTGCCATACTTCTTCCA+TGG - Chr1:100198370-100198389 None:intergenic 40.0%
! ATCTGAAACCAACACCAAAG+TGG - Chr1:100201440-100201459 None:intergenic 40.0%
! ATTGTATTGGAGGGGTTTTG+GGG - Chr1:100202669-100202688 None:intergenic 40.0%
! CGATTTGGATATAAAGCAGC+TGG + Chr1:100203564-100203583 MsG0180006104.01.T01:CDS 40.0%
! CTACTATTAGCACCGAAAGA+AGG - Chr1:100201499-100201518 None:intergenic 40.0%
! CTGGTTTGAGCGTTATAAGT+CGG + Chr1:100198562-100198581 MsG0180006104.01.T01:CDS 40.0%
! CTTCTTCTTGGCTTTCTCTA+TGG - Chr1:100198800-100198819 None:intergenic 40.0%
! GCTATGTGAGGAGTATGAAA+TGG + Chr1:100203608-100203627 MsG0180006104.01.T01:CDS 40.0%
! GGCAAATGGTGCATCTTTTA+TGG - Chr1:100203018-100203037 None:intergenic 40.0%
! TGTGTAACTTGACGAGTTGA+CGG + Chr1:100207024-100207043 MsG0180006104.01.T01:intron 40.0%
! TTCACCTCGAATTTTACGCT+CGG + Chr1:100199114-100199133 MsG0180006104.01.T01:intron 40.0%
! TTTAGTTCCCCAAATGAGGA+GGG + Chr1:100202691-100202710 MsG0180006104.01.T01:intron 40.0%
! TTTTAACAGAGTGCAGACAG+TGG + Chr1:100207497-100207516 MsG0180006104.01.T01:intron 40.0%
! TTTTATCTTGGGCATGGCTA+AGG + Chr1:100201926-100201945 MsG0180006104.01.T01:CDS 40.0%
!! AGATTGAGTTTTCAAGCGTG+CGG + Chr1:100203285-100203304 MsG0180006104.01.T01:intron 40.0%
!! ATAGCAGTAGGAAGTGTCTA+AGG + Chr1:100198963-100198982 MsG0180006104.01.T01:intron 40.0%
!! ATTTTAACAAACCTCGAGGG+AGG + Chr1:100207594-100207613 MsG0180006104.01.T01:intron 40.0%
!! CGCCGTAATCTGTTTCTATA+TGG - Chr1:100203976-100203995 None:intergenic 40.0%
!! GAGAGTTTGTTGTTGTTGCA+TGG - Chr1:100202334-100202353 None:intergenic 40.0%
!! TAAGGTATTGGTGGGAACAT+AGG + Chr1:100201944-100201963 MsG0180006104.01.T01:CDS 40.0%
!! TTAGGCTTTGTTTGCGAGTT+TGG - Chr1:100202819-100202838 None:intergenic 40.0%
!! TTGTCACCAAGGCTTTGTTT+GGG + Chr1:100202451-100202470 MsG0180006104.01.T01:intron 40.0%
!! TTGTTTTGCTGCAGTTATGC+CGG - Chr1:100208490-100208509 None:intergenic 40.0%
!! TTTTTATTTCACCGTCGCCT+AGG - Chr1:100201202-100201221 None:intergenic 40.0%
!!! TCCTTCATTTTTGAAACGCC+TGG - Chr1:100207441-100207460 None:intergenic 40.0%
!!! TTTTAGTTCCCCAAATGAGG+AGG + Chr1:100202690-100202709 MsG0180006104.01.T01:intron 40.0%
AAAGCCAAGAAGAAGTGGTG+GGG + Chr1:100198805-100198824 MsG0180006104.01.T01:intron 45.0%
AACCGCTATCTCATGGCATA+AGG - Chr1:100202360-100202379 None:intergenic 45.0%
AACCTTCTAAGTTCTCGGTC+TGG - Chr1:100198684-100198703 None:intergenic 45.0%
AAGCACTAGTGAGACTGTTG+TGG - Chr1:100207870-100207889 None:intergenic 45.0%
AAGTAGGGGATGGTTGTGTT+TGG + Chr1:100207544-100207563 MsG0180006104.01.T01:intron 45.0%
AATAATGACATTGGGGAGGG+GGG - Chr1:100202751-100202770 None:intergenic 45.0%
AATCCACTTGCACGTGTGTA+AGG - Chr1:100208548-100208567 None:intergenic 45.0%
AATCCATTCACATGCCTAGG+TGG + Chr1:100208006-100208025 MsG0180006104.01.T01:intron 45.0%
ACATCAATCAACCTGTCACG+AGG + Chr1:100206221-100206240 MsG0180006104.01.T01:intron 45.0%
ACCTTCTAAGTTCTCGGTCT+GGG - Chr1:100198683-100198702 None:intergenic 45.0%
AGAAAGCCAAGAAGAAGTGG+TGG + Chr1:100198803-100198822 MsG0180006104.01.T01:intron 45.0%
AGACTGTTGTGGAGAGCTTA+TGG - Chr1:100207859-100207878 None:intergenic 45.0%
AGCAAGGCTCTTCTTTGCAA+TGG - Chr1:100198421-100198440 None:intergenic 45.0%
AGCGTATTGCGGAACAATAG+CGG + Chr1:100206416-100206435 MsG0180006104.01.T01:intron 45.0%
AGCTGCTTCAACGGTAAAAC+CGG + Chr1:100208611-100208630 MsG0180006104.01.T01:CDS 45.0%
AGGCCTATGTTATGGCACAA+TGG - Chr1:100208528-100208547 None:intergenic 45.0%
AGGGAGGAGAATGGAATTTG+CGG + Chr1:100207610-100207629 MsG0180006104.01.T01:intron 45.0%
ATATTCGAATCAGCGTCACG+AGG - Chr1:100204939-100204958 None:intergenic 45.0%
ATTTGAGGATGCGGAGGAAT+TGG + Chr1:100201356-100201375 MsG0180006104.01.T01:intron 45.0%
CAAGGAATACAGCTGGGATA+TGG + Chr1:100198491-100198510 MsG0180006104.01.T01:CDS 45.0%
CAGTGGTGAGAAATGAAGTC+GGG + Chr1:100201247-100201266 MsG0180006104.01.T01:intron 45.0%
CCAGGTGGAATTGTAGCATT+GGG + Chr1:100201832-100201851 MsG0180006104.01.T01:intron 45.0%
CCATTTGATCCTTGTCACCA+AGG + Chr1:100202440-100202459 MsG0180006104.01.T01:intron 45.0%
CGATGACAAGGAATACAGCT+GGG + Chr1:100198485-100198504 MsG0180006104.01.T01:CDS 45.0%
CGTAATGGTCCTCCTTAAAG+TGG - Chr1:100202926-100202945 None:intergenic 45.0%
CGTGTGTAAGGCCTATGTTA+TGG - Chr1:100208536-100208555 None:intergenic 45.0%
CTAAACGAGGAAGTGGAAAG+TGG + Chr1:100201327-100201346 MsG0180006104.01.T01:intron 45.0%
CTTCCTCGTTTAGCTACTAC+AGG - Chr1:100201320-100201339 None:intergenic 45.0%
GAAAGCCAAGAAGAAGTGGT+GGG + Chr1:100198804-100198823 MsG0180006104.01.T01:intron 45.0%
GAACGTGAAATCATCTCCGA+CGG + Chr1:100201715-100201734 MsG0180006104.01.T01:CDS 45.0%
GAGCGTAAAATTCGAGGTGA+AGG - Chr1:100199115-100199134 None:intergenic 45.0%
GCAAAACTAGGACAATGTCG+CGG + Chr1:100202162-100202181 MsG0180006104.01.T01:intron 45.0%
GCAGTGGTGAGAAATGAAGT+CGG + Chr1:100201246-100201265 MsG0180006104.01.T01:intron 45.0%
GCATCTATAGCCTCTGTTAG+CGG - Chr1:100206696-100206715 None:intergenic 45.0%
GCTTATTCCGTCTCAGGAAA+TGG + Chr1:100208182-100208201 MsG0180006104.01.T01:intron 45.0%
GGAAAAAGGAGACGTGCTTA+CGG + Chr1:100208452-100208471 MsG0180006104.01.T01:CDS 45.0%
GGAACAAGATCTATGAGTGC+TGG + Chr1:100198543-100198562 MsG0180006104.01.T01:CDS 45.0%
GGGACCATGTTACCACAATA+AGG - Chr1:100203254-100203273 None:intergenic 45.0%
GTAGTAGCTAAACGAGGAAG+TGG + Chr1:100201320-100201339 MsG0180006104.01.T01:intron 45.0%
GTTGACAACATTGGTGGAAC+TGG - Chr1:100206300-100206319 None:intergenic 45.0%
GTTGCATGGATCACAATAGC+TGG - Chr1:100202320-100202339 None:intergenic 45.0%
GTTTCGGTTGAGACTAGACA+TGG - Chr1:100207732-100207751 None:intergenic 45.0%
TAGAAGATTTGAGGATGCGG+AGG + Chr1:100201350-100201369 MsG0180006104.01.T01:intron 45.0%
TAGGAGCAGACACCTTATAC+TGG - Chr1:100203841-100203860 None:intergenic 45.0%
TCAACTGAACTAAGCTCACG+GGG - Chr1:100204649-100204668 None:intergenic 45.0%
TCCACAGTTGACAACATTGG+TGG - Chr1:100206306-100206325 None:intergenic 45.0%
TCCACCAATGTTGTCAACTG+TGG + Chr1:100206302-100206321 MsG0180006104.01.T01:intron 45.0%
TCTGTACTGGAACTTCTTGC+AGG + Chr1:100203531-100203550 MsG0180006104.01.T01:intron 45.0%
TGATGCCAAGTTCTTGGTTG+AGG + Chr1:100198626-100198645 MsG0180006104.01.T01:CDS 45.0%
TGCAAAGAAGAGCCTTGCTA+TGG + Chr1:100198422-100198441 MsG0180006104.01.T01:CDS 45.0%
TGCAGAGTTACTCTGTGTGA+TGG - Chr1:100202883-100202902 None:intergenic 45.0%
TGTGACTGCAGATATTCCGT+CGG - Chr1:100201734-100201753 None:intergenic 45.0%
TTAACCAGTGCCCACTGTTA+AGG - Chr1:100201154-100201173 None:intergenic 45.0%
TTGTGGAGTTAGAGGCTAGA+GGG + Chr1:100199066-100199085 MsG0180006104.01.T01:intron 45.0%
TTTGAGCGTTATAAGTCGGC+TGG + Chr1:100198566-100198585 MsG0180006104.01.T01:CDS 45.0%
TTTGCGAGTTTGGAGGGTAA+GGG - Chr1:100202809-100202828 None:intergenic 45.0%
TTTGTGGAGTTAGAGGCTAG+AGG + Chr1:100199065-100199084 MsG0180006104.01.T01:intron 45.0%
! AACAATCCCTCGAGCATTGT+GGG + Chr1:100200221-100200240 MsG0180006104.01.T01:intron 45.0%
! AGCACCGAAAGAAGGTTTGA+GGG - Chr1:100201491-100201510 None:intergenic 45.0%
! AGCCTTATGCCATGAGATAG+CGG + Chr1:100202355-100202374 MsG0180006104.01.T01:intron 45.0%
! CAAACAAAGCCTTGGTGACA+AGG - Chr1:100202452-100202471 None:intergenic 45.0%
! CCTTGGTGACAAGGATCAAA+TGG - Chr1:100202443-100202462 None:intergenic 45.0%
! CTTTGTTTCACGCAGTCTTG+CGG - Chr1:100198743-100198762 None:intergenic 45.0%
! GAAAGCGCGTTCTTTCATCT+TGG + Chr1:100203225-100203244 MsG0180006104.01.T01:intron 45.0%
! GAACTTCTCCACTTTGGTGT+TGG + Chr1:100201429-100201448 MsG0180006104.01.T01:intron 45.0%
! TAGCACCGAAAGAAGGTTTG+AGG - Chr1:100201492-100201511 None:intergenic 45.0%
! TCTAAGTCTTCTTCTGGAGG+AGG + Chr1:100201561-100201580 MsG0180006104.01.T01:intron 45.0%
! TGGGTATTGCGGAACATTAG+CGG + Chr1:100206762-100206781 MsG0180006104.01.T01:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + Chr1:100207420-100207439 MsG0180006104.01.T01:intron 45.0%
! TTATGCCATGAGATAGCGGT+TGG + Chr1:100202359-100202378 MsG0180006104.01.T01:intron 45.0%
! TTCTATAGTGCCGCTAACAG+AGG + Chr1:100206683-100206702 MsG0180006104.01.T01:CDS 45.0%
!! CATCAATATTGGGGCTAGCT+TGG - Chr1:100206525-100206544 None:intergenic 45.0%
!! CTTGTCACCAAGGCTTTGTT+TGG + Chr1:100202450-100202469 MsG0180006104.01.T01:intron 45.0%
!! GAGCTGTTTTGCCTCTAAGA+TGG + Chr1:100206933-100206952 MsG0180006104.01.T01:intron 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - Chr1:100202815-100202834 None:intergenic 45.0%
!! TTGTATTGGAGGGGTTTTGG+GGG - Chr1:100202668-100202687 None:intergenic 45.0%
!!! CGGTGGATTGCATGCTATTT+TGG + Chr1:100199134-100199153 MsG0180006104.01.T01:intron 45.0%
!! TGAATATATATAATATATAT+AGG + Chr1:100202060-100202079 MsG0180006104.01.T01:intron 5.0%
!!! TTTTTATAAATGATATTTAT+AGG - Chr1:100205805-100205824 None:intergenic 5.0%
AAAAGGAGACGTGCTTACGG+TGG + Chr1:100208455-100208474 MsG0180006104.01.T01:CDS 50.0%
AATAGCGACGCTACACCTAG+CGG - Chr1:100202212-100202231 None:intergenic 50.0%
AATTCCATTCTCCTCCCTCG+AGG - Chr1:100207608-100207627 None:intergenic 50.0%
ACAGAGCTAAGTAGTCCGTC+TGG - Chr1:100208231-100208250 None:intergenic 50.0%
ACCCAGACCGAGAACTTAGA+AGG + Chr1:100198679-100198698 MsG0180006104.01.T01:CDS 50.0%
ACTAAAGCTCCCGCATATGC+AGG + Chr1:100207344-100207363 MsG0180006104.01.T01:intron 50.0%
ACTTCCTTAACAGTGGGCAC+TGG + Chr1:100201147-100201166 MsG0180006104.01.T01:intron 50.0%
AGAAGGGGAAGCTGCTTCAA+CGG + Chr1:100208602-100208621 MsG0180006104.01.T01:CDS 50.0%
AGACACCAACCGCTATCTCA+TGG - Chr1:100202367-100202386 None:intergenic 50.0%
AGCGACTATGGGACTCTGTT+TGG - Chr1:100203195-100203214 None:intergenic 50.0%
AGGCCTACTTCTATCACCCA+CGG - Chr1:100200663-100200682 None:intergenic 50.0%
ATAATGACATTGGGGAGGGG+GGG - Chr1:100202750-100202769 None:intergenic 50.0%
ATCGGATCCGATGAATGGGT+CGG - Chr1:100201285-100201304 None:intergenic 50.0%
ATGTTGTCAACTGTGGACCG+CGG + Chr1:100206309-100206328 MsG0180006104.01.T01:intron 50.0%
CACGCCCTCAAACCTTCTTT+CGG + Chr1:100201484-100201503 MsG0180006104.01.T01:intron 50.0%
CATTGCTTCCATCTCAACCC+CGG - Chr1:100208633-100208652 None:intergenic 50.0%
CCAACTCCCAAACAAAGCCT+TGG - Chr1:100202460-100202479 None:intergenic 50.0%
CCCAATGCTACAATTCCACC+TGG - Chr1:100201835-100201854 None:intergenic 50.0%
CGCAAGACTGCGTGAAACAA+AGG + Chr1:100198741-100198760 MsG0180006104.01.T01:intron 50.0%
CGGTCCACAGTTGACAACAT+TGG - Chr1:100206309-100206328 None:intergenic 50.0%
CTAAAGCTCCCGCATATGCA+GGG + Chr1:100207345-100207364 MsG0180006104.01.T01:intron 50.0%
CTGCTTCAACGGTAAAACCG+GGG + Chr1:100208613-100208632 MsG0180006104.01.T01:CDS 50.0%
CTGTGGATCGCCAGAAATAG+TGG + Chr1:100206634-100206653 MsG0180006104.01.T01:intron 50.0%
CTTACGGTGGCGAAAATTGC+CGG + Chr1:100208468-100208487 MsG0180006104.01.T01:CDS 50.0%
CTTCCGTGGGTGATAGAAGT+AGG + Chr1:100200657-100200676 MsG0180006104.01.T01:intron 50.0%
CTTGGGCATGGCTAAGGTAT+TGG + Chr1:100201932-100201951 MsG0180006104.01.T01:CDS 50.0%
GAACCACCTAGGCATGTGAA+TGG - Chr1:100208012-100208031 None:intergenic 50.0%
GACACATGAGGTTCATTCGC+AGG - Chr1:100208264-100208283 None:intergenic 50.0%
GACGGAATATCTGCAGTCAC+AGG + Chr1:100201733-100201752 MsG0180006104.01.T01:CDS 50.0%
GCAATTCAAGCATCAAGGGC+TGG + Chr1:100201892-100201911 MsG0180006104.01.T01:CDS 50.0%
GCCAGGTGGAATTGTAGCAT+TGG + Chr1:100201831-100201850 MsG0180006104.01.T01:intron 50.0%
GCGATGACAAGGAATACAGC+TGG + Chr1:100198484-100198503 MsG0180006104.01.T01:CDS 50.0%
GCGTATTGCGGAACAATAGC+GGG + Chr1:100206417-100206436 MsG0180006104.01.T01:intron 50.0%
GCTATCTCATGGCATAAGGC+TGG - Chr1:100202356-100202375 None:intergenic 50.0%
GCTGCTTCAACGGTAAAACC+GGG + Chr1:100208612-100208631 MsG0180006104.01.T01:CDS 50.0%
GGGCAAGACGATCTAGTAAG+TGG - Chr1:100207970-100207989 None:intergenic 50.0%
GGGGAAGAAGGAACAGTACT+AGG + Chr1:100198824-100198843 MsG0180006104.01.T01:intron 50.0%
GTTTGCGAGTTTGGAGGGTA+AGG - Chr1:100202810-100202829 None:intergenic 50.0%
TCCACCGAGCGTAAAATTCG+AGG - Chr1:100199121-100199140 None:intergenic 50.0%
TCTTCCCCACCACTTCTTCT+TGG - Chr1:100198812-100198831 None:intergenic 50.0%
TGGCGATGATGCCAAGTTCT+TGG + Chr1:100198620-100198639 MsG0180006104.01.T01:CDS 50.0%
TGTTACGCGCGAAGAATACC+CGG - Chr1:100200195-100200214 None:intergenic 50.0%
TTCGCTGCAGACGTGAGTAA+GGG - Chr1:100200321-100200340 None:intergenic 50.0%
TTGATCAGGAACGACGCGTT+GGG - Chr1:100205331-100205350 None:intergenic 50.0%
TTTCGCTGCAGACGTGAGTA+AGG - Chr1:100200322-100200341 None:intergenic 50.0%
TTTGATCAGGAACGACGCGT+TGG - Chr1:100205332-100205351 None:intergenic 50.0%
! AAGTCTTCTTCTGGAGGAGG+AGG + Chr1:100201564-100201583 MsG0180006104.01.T01:intron 50.0%
! ACCTCGAATTTTACGCTCGG+TGG + Chr1:100199117-100199136 MsG0180006104.01.T01:intron 50.0%
! AGAAGAAGTGGTGGGGAAGA+AGG + Chr1:100198812-100198831 MsG0180006104.01.T01:intron 50.0%
! ATGCGGGAGCTTTAGTGCAT+TGG - Chr1:100207340-100207359 None:intergenic 50.0%
! CAATGTCGCGGTTTTCACAG+TGG + Chr1:100202174-100202193 MsG0180006104.01.T01:intron 50.0%
! CGGCGGTTCGAGTGATATTT+TGG + Chr1:100203991-100204010 MsG0180006104.01.T01:intron 50.0%
! GAACAATCCCTCGAGCATTG+TGG + Chr1:100200220-100200239 MsG0180006104.01.T01:intron 50.0%
! GCAGGTGAGAACTACCGATT+TGG + Chr1:100203549-100203568 MsG0180006104.01.T01:intron 50.0%
! GGGTATTGCGGAACATTAGC+GGG + Chr1:100206763-100206782 MsG0180006104.01.T01:intron 50.0%
! TGCGGGAGCTTTAGTGCATT+GGG - Chr1:100207339-100207358 None:intergenic 50.0%
!! AGGCTTTGTTTGGGAGTTGG+AGG + Chr1:100202460-100202479 MsG0180006104.01.T01:intron 50.0%
!! AGTACTGGCTCCAAAGAGAG+GGG + Chr1:100203690-100203709 MsG0180006104.01.T01:CDS 50.0%
!! AGTCTTGTTAACTGGTGCCC+CGG + Chr1:100201022-100201041 MsG0180006104.01.T01:intron 50.0%
!! CAGTACTGGCTCCAAAGAGA+GGG + Chr1:100203689-100203708 MsG0180006104.01.T01:CDS 50.0%
!! CCAAGGCTTTGTTTGGGAGT+TGG + Chr1:100202457-100202476 MsG0180006104.01.T01:intron 50.0%
!! GCTTTGTTTGGGAGTTGGAG+GGG + Chr1:100202462-100202481 MsG0180006104.01.T01:intron 50.0%
!! GGCATGGCTAAGGTATTGGT+GGG + Chr1:100201936-100201955 MsG0180006104.01.T01:CDS 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG - Chr1:100202816-100202835 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTGGA+GGG + Chr1:100202461-100202480 MsG0180006104.01.T01:intron 50.0%
!! GGTGGACTAACAGCGTTAAC+AGG - Chr1:100206603-100206622 None:intergenic 50.0%
!! TTTCCTTTGGGGTTTGGCCT+TGG + Chr1:100198872-100198891 MsG0180006104.01.T01:intron 50.0%
AGGCCTTACACACGTGCAAG+TGG + Chr1:100208542-100208561 MsG0180006104.01.T01:CDS 55.0%
ATTCCTTAACCAGTGCCCCG+GGG - Chr1:100201042-100201061 None:intergenic 55.0%
ATTGTGGGACCCAAATGGCG+CGG + Chr1:100200236-100200255 MsG0180006104.01.T01:intron 55.0%
CAAACCTCGAGGGAGGAGAA+TGG + Chr1:100207601-100207620 MsG0180006104.01.T01:intron 55.0%
CGAAAGAAGGTTTGAGGGCG+TGG - Chr1:100201486-100201505 None:intergenic 55.0%
CGAGTTTGGAGGGTAAGGGA+GGG - Chr1:100202805-100202824 None:intergenic 55.0%
CGGTAAAACCGGGGTTGAGA+TGG + Chr1:100208622-100208641 MsG0180006104.01.T01:CDS 55.0%
CTGTGGACCGCGGGATATAA+TGG + Chr1:100206319-100206338 MsG0180006104.01.T01:intron 55.0%
GAGCTAAGTAGTCCGTCTGG+CGG - Chr1:100208228-100208247 None:intergenic 55.0%
GAGTTTGGAGGGTAAGGGAG+GGG - Chr1:100202804-100202823 None:intergenic 55.0%
GATTCCTTAACCAGTGCCCC+GGG - Chr1:100201043-100201062 None:intergenic 55.0%
GCGGAAGGAAGGTCTTAGGA+AGG + Chr1:100202486-100202505 MsG0180006104.01.T01:intron 55.0%
GGATGCGGAGGAATTGGCAA+TGG + Chr1:100201362-100201381 MsG0180006104.01.T01:intron 55.0%
GGATTCCTTAACCAGTGCCC+CGG - Chr1:100201044-100201063 None:intergenic 55.0%
TAATGACATTGGGGAGGGGG+GGG - Chr1:100202749-100202768 None:intergenic 55.0%
TCGGATCCGATGAATGGGTC+GGG - Chr1:100201284-100201303 None:intergenic 55.0%
TCTTGTTAACTGGTGCCCCG+GGG + Chr1:100201024-100201043 MsG0180006104.01.T01:intron 55.0%
TGGTGACCCGACCCATTCAT+CGG + Chr1:100201275-100201294 MsG0180006104.01.T01:intron 55.0%
TGTGCTGTGAACCTCGTGAC+AGG - Chr1:100206235-100206254 None:intergenic 55.0%
TGTTGTCAACTGTGGACCGC+GGG + Chr1:100206310-100206329 MsG0180006104.01.T01:intron 55.0%
TTGGGTCCCACAATGCTCGA+GGG - Chr1:100200230-100200249 None:intergenic 55.0%
TTTGGGGACTTTCCGCCAGA+CGG + Chr1:100208213-100208232 MsG0180006104.01.T01:CDS 55.0%
TTTGGGTCCCACAATGCTCG+AGG - Chr1:100200231-100200250 None:intergenic 55.0%
! CGAGCATTGTGGGACCCAAA+TGG + Chr1:100200231-100200250 MsG0180006104.01.T01:intron 55.0%
! GAAGGTTTGAGGGCGTGGAA+AGG - Chr1:100201481-100201500 None:intergenic 55.0%
! GTCTTGTTAACTGGTGCCCC+GGG + Chr1:100201023-100201042 MsG0180006104.01.T01:intron 55.0%
! TCTTCTTCTGGAGGAGGAGG+AGG + Chr1:100201567-100201586 MsG0180006104.01.T01:intron 55.0%
!! CCAGTACTGGCTCCAAAGAG+AGG + Chr1:100203688-100203707 MsG0180006104.01.T01:CDS 55.0%
!! CCTCTCTTTGGAGCCAGTAC+TGG - Chr1:100203691-100203710 None:intergenic 55.0%
!! GGGCATGGCTAAGGTATTGG+TGG + Chr1:100201935-100201954 MsG0180006104.01.T01:CDS 55.0%
!!! GGAGGGGTTTTGGGGGTTTT+GGG - Chr1:100202661-100202680 None:intergenic 55.0%
!!! GGGTTTTGGGGGTTTTGGGA+GGG - Chr1:100202657-100202676 None:intergenic 55.0%
!!! TGGAGGGGTTTTGGGGGTTT+TGG - Chr1:100202662-100202681 None:intergenic 55.0%
CACAGGCGCCAAGAAAGCAG+TGG + Chr1:100198522-100198541 MsG0180006104.01.T01:CDS 60.0%
CATATGCAGGGTCCGGGAAG+GGG + Chr1:100207357-100207376 MsG0180006104.01.T01:intron 60.0%
CGGGAAGGGGTCCCACTATT+CGG + Chr1:100207370-100207389 MsG0180006104.01.T01:intron 60.0%
CTCCTACAGCAAGCGCTTCG+CGG - Chr1:100203737-100203756 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - Chr1:100207357-100207376 None:intergenic 60.0%
GAGAGCTTGCCGCGCCATTT+GGG - Chr1:100200248-100200267 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + Chr1:100207356-100207375 MsG0180006104.01.T01:intron 60.0%
GCGAGTTTGGAGGGTAAGGG+AGG - Chr1:100202806-100202825 None:intergenic 60.0%
GGACCAAGGCCAAACCCCAA+AGG - Chr1:100198878-100198897 None:intergenic 60.0%
GGGAGCGGAAGGAAGGTCTT+AGG + Chr1:100202482-100202501 MsG0180006104.01.T01:intron 60.0%
GGTGGCATTCCCCTTCCATG+TGG + Chr1:100200472-100200491 MsG0180006104.01.T01:intron 60.0%
GTTTGGGAGTTGGAGGGGAG+CGG + Chr1:100202467-100202486 MsG0180006104.01.T01:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG - Chr1:100207356-100207375 None:intergenic 60.0%
TTGGAGGGTAAGGGAGGGGA+GGG - Chr1:100202800-100202819 None:intergenic 60.0%
TTTGGAGGGTAAGGGAGGGG+AGG - Chr1:100202801-100202820 None:intergenic 60.0%
! CGAATAGTGGGACCCCTTCC+CGG - Chr1:100207372-100207391 None:intergenic 60.0%
! GGACACGTGTTGACGAGACC+TGG - Chr1:100203716-100203735 None:intergenic 60.0%
!!! GGGGTTTTGGGGGTTTTGGG+AGG - Chr1:100202658-100202677 None:intergenic 60.0%
CGAGACCTGGCCCCTCTCTT+TGG - Chr1:100203703-100203722 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG + Chr1:100207355-100207374 MsG0180006104.01.T01:intron 65.0%
CTCCCGCATATGCAGGGTCC+GGG + Chr1:100207351-100207370 MsG0180006104.01.T01:intron 65.0%
GCTCCCGCATATGCAGGGTC+CGG + Chr1:100207350-100207369 MsG0180006104.01.T01:intron 65.0%
GGAGAGCTTGCCGCGCCATT+TGG - Chr1:100200249-100200268 None:intergenic 65.0%
GTTGGAGGGGAGCGGAAGGA+AGG + Chr1:100202475-100202494 MsG0180006104.01.T01:intron 65.0%
TCTGGAGGAGGAGGAGGAGC+AGG + Chr1:100201573-100201592 MsG0180006104.01.T01:intron 65.0%
TGGCTCCAAAGAGAGGGGCC+AGG + Chr1:100203695-100203714 MsG0180006104.01.T01:CDS 65.0%
!! GTCCGCGAAGCGCTTGCTGT+AGG + Chr1:100203732-100203751 MsG0180006104.01.T01:CDS 65.0%
GGGAGTTGGAGGGGAGCGGA+AGG + Chr1:100202471-100202490 MsG0180006104.01.T01:intron 70.0%
TAACTGGTGCCCCGGGGCAC+TGG + Chr1:100201030-100201049 MsG0180006104.01.T01:intron 70.0%
! CATTGGGGAGGGGGGGGCAT+TGG - Chr1:100202743-100202762 None:intergenic 70.0%
!! GTGCCCCGGGGCACTGGTTA+AGG + Chr1:100201036-100201055 MsG0180006104.01.T01:intron 70.0%
!! TGGGGAGGGGGGGGCATTGG+TGG - Chr1:100202740-100202759 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 100198360 100208653 100198360 ID=MsG0180006104.01;Name=MsG0180006104.01
Chr1 mRNA 100198360 100208653 100198360 ID=MsG0180006104.01.T01;Parent=MsG0180006104.01;Name=MsG0180006104.01.T01;_AED=0.49;_eAED=0.52;_QI=0|0.33|0.28|1|1|1|7|0|471
Chr1 exon 100198360 100198700 100198360 ID=MsG0180006104.01.T01:exon:38127;Parent=MsG0180006104.01.T01
Chr1 exon 100201702 100201754 100201702 ID=MsG0180006104.01.T01:exon:38128;Parent=MsG0180006104.01.T01
Chr1 exon 100201836 100201965 100201836 ID=MsG0180006104.01.T01:exon:38129;Parent=MsG0180006104.01.T01
Chr1 exon 100203316 100203374 100203316 ID=MsG0180006104.01.T01:exon:38130;Parent=MsG0180006104.01.T01
Chr1 exon 100203553 100203847 100203553 ID=MsG0180006104.01.T01:exon:38131;Parent=MsG0180006104.01.T01
Chr1 exon 100206683 100206764 100206683 ID=MsG0180006104.01.T01:exon:38132;Parent=MsG0180006104.01.T01
Chr1 exon 100208198 100208653 100208198 ID=MsG0180006104.01.T01:exon:38133;Parent=MsG0180006104.01.T01
Chr1 CDS 100198360 100198700 100198360 ID=MsG0180006104.01.T01:cds;Parent=MsG0180006104.01.T01
Chr1 CDS 100201702 100201754 100201702 ID=MsG0180006104.01.T01:cds;Parent=MsG0180006104.01.T01
Chr1 CDS 100201836 100201965 100201836 ID=MsG0180006104.01.T01:cds;Parent=MsG0180006104.01.T01
Chr1 CDS 100203316 100203374 100203316 ID=MsG0180006104.01.T01:cds;Parent=MsG0180006104.01.T01
Chr1 CDS 100203553 100203847 100203553 ID=MsG0180006104.01.T01:cds;Parent=MsG0180006104.01.T01
Chr1 CDS 100206683 100206764 100206683 ID=MsG0180006104.01.T01:cds;Parent=MsG0180006104.01.T01
Chr1 CDS 100208198 100208653 100208198 ID=MsG0180006104.01.T01:cds;Parent=MsG0180006104.01.T01
Gene Sequence

>MsG0180006104.01.T01

ATGAAATCCATGGAAGAAGTATGGCAGAAACAAATGAGATCTTTACAGTCTAGTCTCTCCATTGCAAAGAAGAGCCTTGCTATGGATGATTCTGAAAGGAATTCAGATGCTTCTGTTAATGCAAGCGATGACAAGGAATACAGCTGGGATATGGGAAATAATCACAGGCGCCAAGAAAGCAGTGGAACAAGATCTATGAGTGCTGGTTTGAGCGTTATAAGTCGGCTGGCTGAAGAATTTGAGCAAAGAAGTCAAGTATTTGGCGATGATGCCAAGTTCTTGGTTGAGGTAAAATCTGGTCAAATTGAAGCAAGTTTGAACCCAGACCGAGAACTTAGAAGTCAACAAGAAGATGAACGTGAAATCATCTCCGACGGAATATCTGCAGTCACAGGTGGAATTGTAGCATTGGGAAAGTTTGATGCTCTGCACATAGGTCATCGAGAACTTGCAATTCAAGCATCAAGGGCTGGTCCTCCATTTCTTTTATCTTGGGCATGGCTAAGGTATTGGTGGGAACATAGTCCGCGACAATTTGTTGAGAAGTTATCAAAAGAACTTAGAGTGCGTGGAGTTGTTGCAGGTGAGAACTACCGATTTGGATATAAAGCAGCTGGTGATGCATCAGAGTTAGAAAAGCTATGTGAGGAGTATGAAATGGAAGCTTACATAATAAAATCTGTTATGGACAAGAACCAATACTCAACAAATAAAAATTCCAGTACTGGCTCCAAAGAGAGGGGCCAGGTCTCGTCAACACGTGTCCGCGAAGCGCTTGCTGTAGGAGATATGAAATATGTCTCAGAGCTTTTGGGTAGACAACATCGTCTTGTATTAATGGCCATGATCGAGAAACATTCAGCTTTAGCCAGTATAAGTTCTATAGTGCCGCTAACAGAGGCTATAGATGCTATTGCGTCCCGCTATAGCCTCTATTTGACACCATTGTGTACTAAATGGGAAATGGAATCTGTATTTGGGGACTTTCCGCCAGACGGACTACTTAGCTCTGTAAGCAATAGTCCTGCGAATGAACCTCATGTGTCATCTCGAAACATAGGTGAAAGTTCTTTTGAATTGACTCATACTGGAAATTCAGGGGAAGCTCAAATGGTAGATGTGTCTCCAAAAGAAAGTAGCAAGAGAACTGCCACTGCTGTTTGCAAAGTAAATCTTGGAAAGAAGGTGTTTGATTTGGTATTAGCCAATCAAATGGAAAAAGGAGACGTGCTTACGGTGGCGAAAATTGCCGGCATAACTGCAGCAAAACAAACGAGTAACCTGATTCCATTGTGCCATAACATAGGCCTTACACACGTGCAAGTGGATTTGAGATTGAATCATGAGGACTTCAGTGTAACAATAGAAGGGGAAGCTGCTTCAACGGTAAAACCGGGGTTGAGATGGAAGCAATGA

Protein sequence

>MsG0180006104.01.T01

MKSMEEVWQKQMRSLQSSLSIAKKSLAMDDSERNSDASVNASDDKEYSWDMGNNHRRQESSGTRSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQIEASLNPDRELRSQQEDEREIISDGISAVTGGIVALGKFDALHIGHRELAIQASRAGPPFLLSWAWLRYWWEHSPRQFVEKLSKELRVRGVVAGENYRFGYKAAGDASELEKLCEEYEMEAYIIKSVMDKNQYSTNKNSSTGSKERGQVSSTRVREALAVGDMKYVSELLGRQHRLVLMAMIEKHSALASISSIVPLTEAIDAIASRYSLYLTPLCTKWEMESVFGDFPPDGLLSSVSNSPANEPHVSSRNIGESSFELTHTGNSGEAQMVDVSPKESSKRTATAVCKVNLGKKVFDLVLANQMEKGDVLTVAKIAGITAAKQTSNLIPLCHNIGLTHVQVDLRLNHEDFSVTIEGEAASTVKPGLRWKQ*