AlfalfaGEDB | MsG0580029890.01

M. sativa cultivar ZhongmuNo.1 / MsG0580029890.01

KEGG: K02731
GO: GO:0004175 GO:0004298 GO:0005839 GO:0006511 GO:0019773 GO:0051603
PFAM: PF00227 PF10584

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029890.01.T01	XP_018829633.1	90.361	249	24	0	1	249	1	249	2.97E-159	451

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029890.01.T01	Q9SXU1	93.86	228	14	0	1	228	1	228	1.16E-159	445

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029890.01.T01	A0A2I4FDB5	90.361	249	24	0	1	249	1	249	1.42e-159	451

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type
MsG0880044550.01	MsG0580029890.01	PPI
MsG0580025351.01	MsG0580029890.01	PPI
MsG0880045615.01	MsG0580029890.01	PPI
MsG0580024324.01	MsG0580029890.01	PPI
MsG0580024792.01	MsG0580029890.01	PPI
MsG0580029890.01	MsG0880045615.01	PPI
MsG0580029890.01	MsG0580024507.01	PPI
MsG0580029890.01	MsG0180000135.01	PPI
MsG0580029890.01	MsG0180001547.01	PPI
MsG0280009575.01	MsG0580029890.01	PPI
MsG0580029892.01	MsG0580029890.01	PPI
MsG0580029890.01	MsG0480023410.01	PPI
MsG0180006029.01	MsG0580029890.01	PPI
MsG0580029890.01	MsG0680031508.01	PPI
MsG0780040330.01	MsG0580029890.01	PPI
MsG0780040329.01	MsG0580029890.01	PPI
MsG0480023412.01	MsG0580029890.01	PPI
MsG0580029890.01	MsG0480023412.01	PPI
MsG0580029890.01	MsG0880044543.01	PPI
MsG0280009575.01	MsG0580029890.01	PPI
MsG0580029890.01	MsG0380017800.01	PPI
MsG0280011059.01	MsG0580029890.01	PPI
MsG0780040329.01	MsG0580029890.01	PPI
MsG0180003744.01	MsG0580029890.01	PPI
MsG0180006029.01	MsG0580029890.01	PPI
MsG0580024181.01	MsG0580029890.01	PPI
MsG0580029890.01	MsG0580029895.01	PPI
MsG0780040330.01	MsG0580029890.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029890.01.T01	MTR_8g075320	93.173	249	17	0	1	249	1	249	3.64e-161	446
MsG0580029890.01.T01	MTR_2g016050	92.771	249	18	0	1	249	1	249	8.11e-159	441
MsG0580029890.01.T01	MTR_0167s0060	38.889	234	138	3	2	232	4	235	8.17e-54	174
MsG0580029890.01.T01	MTR_7g070070	42.500	200	112	3	3	200	4	202	5.82e-52	169
MsG0580029890.01.T01	MTR_5g016590	42.500	200	112	3	3	200	4	202	1.10e-51	169
MsG0580029890.01.T01	MTR_1g112250	43.564	202	108	3	2	199	6	205	5.89e-50	164
MsG0580029890.01.T01	MTR_8g464460	38.397	237	133	6	1	225	1	236	2.97e-43	147
MsG0580029890.01.T01	MTR_2g060830	38.494	239	130	8	1	225	1	236	5.29e-42	144
MsG0580029890.01.T01	MTR_1g022410	36.019	211	130	3	2	211	4	210	2.57e-36	130
MsG0580029890.01.T01	MTR_6g024135	34.104	173	112	1	4	176	8	178	7.15e-28	107
MsG0580029890.01.T01	MTR_4g012740	28.800	250	133	7	2	211	235	479	1.07e-18	85.1
MsG0580029890.01.T01	MTR_4g057090	28.409	176	117	4	25	196	110	280	1.65e-12	66.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029890.01.T01	AT5G66140	88.400	250	28	1	1	249	1	250	7.39e-153	426
MsG0580029890.01.T01	AT3G51260	87.336	229	28	1	1	228	1	229	5.37e-149	416
MsG0580029890.01.T01	AT3G51260	88.679	212	24	0	1	212	1	212	9.77e-142	397
MsG0580029890.01.T01	AT3G22110	43.000	200	111	3	3	200	4	202	7.58e-53	172
MsG0580029890.01.T01	AT1G16470	38.462	234	139	3	2	232	4	235	7.72e-52	169
MsG0580029890.01.T01	AT1G16470	38.462	234	139	3	2	232	4	235	7.72e-52	169
MsG0580029890.01.T01	AT1G79210	38.462	234	139	3	2	232	4	235	1.76e-51	167
MsG0580029890.01.T01	AT1G79210	38.462	234	139	3	2	232	4	235	1.76e-51	167
MsG0580029890.01.T01	AT1G79210	38.462	234	139	3	2	232	4	235	1.76e-51	167
MsG0580029890.01.T01	AT1G53850	40.678	236	130	5	2	231	6	237	2.31e-51	167
MsG0580029890.01.T01	AT1G53850	40.678	236	130	5	2	231	6	237	2.31e-51	167
MsG0580029890.01.T01	AT3G14290	44.059	202	107	3	2	199	6	205	7.67e-51	166
MsG0580029890.01.T01	AT5G35590	38.819	237	132	6	1	225	1	236	1.39e-43	148
MsG0580029890.01.T01	AT2G05840	37.975	237	134	6	1	225	1	236	1.21e-41	143
MsG0580029890.01.T01	AT2G05840	37.615	218	126	4	1	209	1	217	2.07e-40	139
MsG0580029890.01.T01	AT5G42790	34.310	239	143	5	2	232	4	236	2.28e-38	135
MsG0580029890.01.T01	AT1G47250	33.891	239	144	5	2	232	4	236	2.38e-38	135
MsG0580029890.01.T01	AT2G05840	36.598	194	118	3	4	193	9	201	2.51e-36	128
MsG0580029890.01.T01	AT4G15165	35.000	200	85	4	3	200	4	160	4.80e-33	119
MsG0580029890.01.T01	AT2G27020	33.514	185	120	2	4	187	8	190	3.06e-28	108
MsG0580029890.01.T01	AT2G27020	33.514	185	120	2	4	187	110	292	3.41e-27	107

Find 66 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAACTCGGGCCCGGTTTATA+AGG	0.275165	5:-103458870	None:intergenic
AGTAGTGGTGTGCGGCCATT+TGG	0.275198	5:+103458985	MsG0580029890.01.T01:CDS
GGTGAGGAAGATTGTTAGTT+TGG	0.281871	5:+103458798	MsG0580029890.01.T01:CDS
TGGGCAAGAAACTGTCAAAT+TGG	0.335063	5:+103459167	MsG0580029890.01.T01:CDS
CATGTTGCTCTTGCTTGTGC+TGG	0.361778	5:+103458826	MsG0580029890.01.T01:CDS
TACATAACCCGTTACATTGC+AGG	0.399795	5:+103458940	MsG0580029890.01.T01:CDS
TAACCTCGAGTCTTGCAGTT+TGG	0.402098	5:-103458447	None:intergenic
GATTGAACTTGAGTTTCTTC+CGG	0.402357	5:-103459109	None:intergenic
AACCTAGAATCATGTGTCCT+TGG	0.409440	5:-103459856	None:intergenic
CTTCAAGAGCATACTCTACT+TGG	0.421409	5:-103458346	None:intergenic
CTGAAGACCTGCAATGTAAC+GGG	0.426498	5:-103458947	None:intergenic
ATGCTCGTGTCCTTATAAAC+CGG	0.435736	5:+103458860	MsG0580029890.01.T01:CDS
GTAGTGGTGTGCGGCCATTT+GGG	0.436998	5:+103458986	MsG0580029890.01.T01:CDS
AACGCCGCTGTTGGCGTTCG+AGG	0.444503	5:+103458383	MsG0580029890.01.T01:CDS
ATTAGGTTGTTGAGAGTGGA+GGG	0.456795	5:+103459703	MsG0580029890.01.T01:intron
CGAGTCTTGCAGTTTGGCAG+CGG	0.458214	5:-103458441	None:intergenic
TGTAATTAGGTTGTTGAGAG+TGG	0.458926	5:+103459699	MsG0580029890.01.T01:intron
TCTGGCATTCAACTCGGGCC+CGG	0.465148	5:-103458879	None:intergenic
GCTTGGAAAGCTAACGCAAC+CGG	0.470438	5:+103459090	MsG0580029890.01.T01:CDS
ACCTAGAATCATGTGTCCTT+GGG	0.476679	5:-103459855	None:intergenic
ACTTGGAAGAGATGACCATC+AGG	0.480914	5:-103458329	None:intergenic
GGGCTTTCGACGTTGATCGT+TGG	0.483437	5:+103459006	MsG0580029890.01.T01:CDS
TTGTACCAAACCGACCCTTC+CGG	0.487764	5:+103459057	MsG0580029890.01.T01:CDS
CAACGGTAAGTCTATGACTC+TGG	0.487875	5:-103458897	None:intergenic
CGCAAAGGTAACGCCGCTGT+TGG	0.490000	5:+103458374	MsG0580029890.01.T01:CDS
CGTTGAGGATCCTTGTACTG+TGG	0.495580	5:+103458915	MsG0580029890.01.T01:CDS
CGCTGAGATTGAAGCAGAGA+AGG	0.501268	5:+103459803	MsG0580029890.01.T01:CDS
ATGTACCGGAAGGGTCGGTT+TGG	0.502119	5:-103459062	None:intergenic
AAGAACTATAAAGACACCTC+TGG	0.510915	5:+103459147	MsG0580029890.01.T01:CDS
AAAGACGGTGACCCGGTGTA+AGG	0.518981	5:-103459036	None:intergenic
AGCAGAGAAGGCAGCTGCTG+AGG	0.524478	5:+103459815	MsG0580029890.01.T01:CDS
ATCAACGTCGAAAGCCCAAA+TGG	0.525799	5:-103459000	None:intergenic
GTTTATAAGGACACGAGCAT+CGG	0.528829	5:-103458857	None:intergenic
ATGACTCTGGCATTCAACTC+GGG	0.530398	5:-103458884	None:intergenic
TATGACTCTGGCATTCAACT+CGG	0.533537	5:-103458885	None:intergenic
GGCTATCAGCTCGTTGCTTG+AGG	0.537039	5:+103459188	MsG0580029890.01.T01:CDS
GCTGAAGACCTGCAATGTAA+CGG	0.539298	5:-103458948	None:intergenic
AATTAGGTTGTTGAGAGTGG+AGG	0.542436	5:+103459702	MsG0580029890.01.T01:intron
AGTTCTTCTCTAGAAACTCA+CGG	0.553509	5:-103459131	None:intergenic
TGCTCGTGTCCTTATAAACC+GGG	0.561137	5:+103458861	MsG0580029890.01.T01:CDS
AGCGGCGTTACCTTTGCGAA+CGG	0.567249	5:-103458369	None:intergenic
TTGACGCAGACCATTCTCCT+TGG	0.569902	5:-103459751	None:intergenic
AGAACTATAAAGACACCTCT+GGG	0.578182	5:+103459148	MsG0580029890.01.T01:CDS
TTTCCAAGCCGAAAATGTAC+CGG	0.590468	5:-103459076	None:intergenic
GAATGGTCTGCGTCAACTAG+AGG	0.598251	5:+103459758	MsG0580029890.01.T01:CDS
TGCTTCAATCTCAGCGACAA+TGG	0.601944	5:-103459796	None:intergenic
AGAAGAATATCAAAATGTCT+CGG	0.605446	5:+103458279	None:intergenic
GTTATGTATTCCACAGTACA+AGG	0.608705	5:-103458925	None:intergenic
GCTGTGATGACCAAGGAGAA+TGG	0.610505	5:+103459741	MsG0580029890.01.T01:CDS
TAGAATCATGTGTCCTTGGG+AGG	0.611406	5:-103459852	None:intergenic
TGCAAAGAAAGTTCCTCCCA+AGG	0.612392	5:+103459839	MsG0580029890.01.T01:CDS
GCTCTTGAAGCCGTTCGCAA+AGG	0.618632	5:+103458359	MsG0580029890.01.T01:CDS
CAAGCCGAAAATGTACCGGA+AGG	0.619903	5:-103459072	None:intergenic
CGAAAATGTACCGGAAGGGT+CGG	0.623923	5:-103459067	None:intergenic
TTGGTACAAAGACGGTGACC+CGG	0.625299	5:-103459043	None:intergenic
CAAAAGTACACACAGAGTAG+TGG	0.631460	5:+103458970	MsG0580029890.01.T01:CDS
AAGCCGAAAATGTACCGGAA+GGG	0.641577	5:-103459071	None:intergenic
CTGCCAAACTGCAAGACTCG+AGG	0.647953	5:+103458444	MsG0580029890.01.T01:CDS
AGACAACGTCGTTCTCTGCG+TGG	0.656938	5:+103458409	MsG0580029890.01.T01:CDS
GGGTCGGTTTGGTACAAAGA+CGG	0.662196	5:-103459051	None:intergenic
TTTGACAGTTTCTTGCCCAG+AGG	0.662254	5:-103459163	None:intergenic
CACAGTACAAGGATCCTCAA+CGG	0.666452	5:-103458914	None:intergenic
TGTACCTCGAACGCCAACAG+CGG	0.680003	5:-103458387	None:intergenic
ACACACAGAGTAGTGGTGTG+CGG	0.698448	5:+103458977	MsG0580029890.01.T01:CDS
GAGTCATAGACTTACCGTTG+AGG	0.701059	5:+103458900	MsG0580029890.01.T01:CDS
TGAAGTTGCTGTGATGACCA+AGG	0.749955	5:+103459734	MsG0580029890.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATATATATAATATATGGATT+TGG	+	Chr5:103458738-103458757	MsG0580029890.01.T01:intron	10.0%
!!	TAATAAAAGCAAAAAAAAAA+AGG	-	Chr5:103458591-103458610	None:intergenic	10.0%
!!	TATATATAATATATGGATTT+GGG	+	Chr5:103458739-103458758	MsG0580029890.01.T01:intron	10.0%
!!	TATATATATTATAAGCAGTT+TGG	-	Chr5:103458727-103458746	None:intergenic	15.0%
!!	AAGCTATATAAATGAATGAT+AGG	-	Chr5:103459264-103459283	None:intergenic	20.0%
!!	TAATTATTTGACTGCATATT+AGG	+	Chr5:103459489-103459508	MsG0580029890.01.T01:intron	20.0%
!	AATAGTAAAAGACAGATACA+TGG	-	Chr5:103459361-103459380	None:intergenic	25.0%
!	ACTTTGCAAAATAAATGCAT+GGG	+	Chr5:103459448-103459467	MsG0580029890.01.T01:intron	25.0%
!	GCAGTCAAATAATTATGTTA+AGG	-	Chr5:103459484-103459503	None:intergenic	25.0%
!	TACTTTCATAGATTAAAGAC+AGG	-	Chr5:103459603-103459622	None:intergenic	25.0%
!	TATATTATAAGCAGTTTGGT+TGG	-	Chr5:103458723-103458742	None:intergenic	25.0%
!	TTTCTTGCTAGATGATATAT+AGG	+	Chr5:103459314-103459333	MsG0580029890.01.T01:intron	25.0%
!!	TATAGGGTAGTATTTTCATT+TGG	+	Chr5:103459665-103459684	MsG0580029890.01.T01:intron	25.0%
!!!	TTTGCTTTTGTTTTGAAGAT+TGG	+	Chr5:103458777-103458796	MsG0580029890.01.T01:intron	25.0%
	CACTTTGCAAAATAAATGCA+TGG	+	Chr5:103459447-103459466	MsG0580029890.01.T01:intron	30.0%
	CTTTGCAAAATAAATGCATG+GGG	+	Chr5:103459449-103459468	MsG0580029890.01.T01:intron	30.0%
	TCAACAACCTAATTACATGT+AGG	-	Chr5:103459696-103459715	None:intergenic	30.0%
!	GGTTTTTCCTACATGTAATT+AGG	+	Chr5:103459686-103459705	MsG0580029890.01.T01:intron	30.0%
!!	TTATAGTTCTAGTTGAGCAA+CGG	-	Chr5:103458647-103458666	None:intergenic	30.0%
!!!	TTTTGTTTTGAAGATTGGTG+AGG	+	Chr5:103458782-103458801	MsG0580029890.01.T01:intron	30.0%
	AACTCGATGATCAAGAATTG+AGG	+	Chr5:103458541-103458560	MsG0580029890.01.T01:intron	35.0%
	AAGAACTATAAAGACACCTC+TGG	+	Chr5:103459147-103459166	MsG0580029890.01.T01:CDS	35.0%
	AATTCCATGCTAGGTTAATC+TGG	+	Chr5:103458504-103458523	MsG0580029890.01.T01:intron	35.0%
	AGAACTATAAAGACACCTCT+GGG	+	Chr5:103459148-103459167	MsG0580029890.01.T01:CDS	35.0%
	CATGCAATAAATTCCATGCT+AGG	+	Chr5:103458495-103458514	MsG0580029890.01.T01:intron	35.0%
	CTAGCATGGAATTTATTGCA+TGG	-	Chr5:103458497-103458516	None:intergenic	35.0%
	CTAGGTTAATCTGGATTCTA+GGG	+	Chr5:103458513-103458532	MsG0580029890.01.T01:intron	35.0%
	GATTGAACTTGAGTTTCTTC+CGG	-	Chr5:103459112-103459131	None:intergenic	35.0%
	GTTATGTATTCCACAGTACA+AGG	-	Chr5:103458928-103458947	None:intergenic	35.0%
!	AGTTCTTCTCTAGAAACTCA+CGG	-	Chr5:103459134-103459153	None:intergenic	35.0%
!	TGTAATTAGGTTGTTGAGAG+TGG	+	Chr5:103459699-103459718	MsG0580029890.01.T01:intron	35.0%
	AGACAGATACATGGAAAGAG+CGG	-	Chr5:103459352-103459371	None:intergenic	40.0%
	ATGCTCGTGTCCTTATAAAC+CGG	+	Chr5:103458860-103458879	MsG0580029890.01.T01:CDS	40.0%
	GAATCCAGATTAACCTAGCA+TGG	-	Chr5:103458511-103458530	None:intergenic	40.0%
	GCAAAATAAATGCATGGGGA+CGG	+	Chr5:103459453-103459472	MsG0580029890.01.T01:intron	40.0%
	GCTAGGTTAATCTGGATTCT+AGG	+	Chr5:103458512-103458531	MsG0580029890.01.T01:intron	40.0%
	GGTGAGGAAGATTGTTAGTT+TGG	+	Chr5:103458798-103458817	MsG0580029890.01.T01:CDS	40.0%
	GTTTATAAGGACACGAGCAT+CGG	-	Chr5:103458860-103458879	None:intergenic	40.0%
	TACATAACCCGTTACATTGC+AGG	+	Chr5:103458940-103458959	MsG0580029890.01.T01:CDS	40.0%
	TATGACTCTGGCATTCAACT+CGG	-	Chr5:103458888-103458907	None:intergenic	40.0%
	TGGGCAAGAAACTGTCAAAT+TGG	+	Chr5:103459167-103459186	MsG0580029890.01.T01:CDS	40.0%
	TTAAACGCTGAGTGTGACTT+TGG	+	Chr5:103459381-103459400	MsG0580029890.01.T01:intron	40.0%
	TTTCCAAGCCGAAAATGTAC+CGG	-	Chr5:103459079-103459098	None:intergenic	40.0%
!	AATTAGGTTGTTGAGAGTGG+AGG	+	Chr5:103459702-103459721	MsG0580029890.01.T01:intron	40.0%
!	ATCACAGTTTTCTCTCCTGA+TGG	+	Chr5:103458314-103458333	MsG0580029890.01.T01:CDS	40.0%
!	ATTAGGTTGTTGAGAGTGGA+GGG	+	Chr5:103459703-103459722	MsG0580029890.01.T01:intron	40.0%
!	CAAAAGTACACACAGAGTAG+TGG	+	Chr5:103458970-103458989	MsG0580029890.01.T01:CDS	40.0%
!	CTTCAAGAGCATACTCTACT+TGG	-	Chr5:103458349-103458368	None:intergenic	40.0%
!!!	GTTGGTTTTGATCCTTACAC+CGG	+	Chr5:103459024-103459043	MsG0580029890.01.T01:CDS	40.0%
!!!	TTGGTTTTGATCCTTACACC+GGG	+	Chr5:103459025-103459044	MsG0580029890.01.T01:CDS	40.0%
	AAGCCGAAAATGTACCGGAA+GGG	-	Chr5:103459074-103459093	None:intergenic	45.0%
	ACTTGGAAGAGATGACCATC+AGG	-	Chr5:103458332-103458351	None:intergenic	45.0%
	ATCAACGTCGAAAGCCCAAA+TGG	-	Chr5:103459003-103459022	None:intergenic	45.0%
	ATGACTCTGGCATTCAACTC+GGG	-	Chr5:103458887-103458906	None:intergenic	45.0%
	CAACGGTAAGTCTATGACTC+TGG	-	Chr5:103458900-103458919	None:intergenic	45.0%
	CACAGTACAAGGATCCTCAA+CGG	-	Chr5:103458917-103458936	None:intergenic	45.0%
	CTGAAGACCTGCAATGTAAC+GGG	-	Chr5:103458950-103458969	None:intergenic	45.0%
	GAGTCATAGACTTACCGTTG+AGG	+	Chr5:103458900-103458919	MsG0580029890.01.T01:CDS	45.0%
	GCTGAAGACCTGCAATGTAA+CGG	-	Chr5:103458951-103458970	None:intergenic	45.0%
	GCTGAGTGTGACTTTGGATT+TGG	+	Chr5:103459387-103459406	MsG0580029890.01.T01:intron	45.0%
	TAACCTCGAGTCTTGCAGTT+TGG	-	Chr5:103458450-103458469	None:intergenic	45.0%
	TGAAGTTGCTGTGATGACCA+AGG	+	Chr5:103459734-103459753	MsG0580029890.01.T01:CDS	45.0%
	TGCAAAGAAAGTTCCTCCCA+AGG	+	Chr5:103459839-103459858	MsG0580029890.01.T01:CDS	45.0%
	TGCTCGTGTCCTTATAAACC+GGG	+	Chr5:103458861-103458880	MsG0580029890.01.T01:CDS	45.0%
	TGCTTCAATCTCAGCGACAA+TGG	-	Chr5:103459799-103459818	None:intergenic	45.0%
	TTTGACAGTTTCTTGCCCAG+AGG	-	Chr5:103459166-103459185	None:intergenic	45.0%
!	GCAACGGAGCATTATACAAC+AGG	-	Chr5:103458631-103458650	None:intergenic	45.0%
!!	ATTTATATAATACTATTATA+GGG	+	Chr5:103459649-103459668	MsG0580029890.01.T01:intron	5.0%
!!	CTTATAATATATATAATATA+TGG	+	Chr5:103458732-103458751	MsG0580029890.01.T01:intron	5.0%
!!	TATTTATATAATACTATTAT+AGG	+	Chr5:103459648-103459667	MsG0580029890.01.T01:intron	5.0%
	ACACACAGAGTAGTGGTGTG+CGG	+	Chr5:103458977-103458996	MsG0580029890.01.T01:CDS	50.0%
	CAAGCCGAAAATGTACCGGA+AGG	-	Chr5:103459075-103459094	None:intergenic	50.0%
	CATGTTGCTCTTGCTTGTGC+TGG	+	Chr5:103458826-103458845	MsG0580029890.01.T01:CDS	50.0%
	CGAAAATGTACCGGAAGGGT+CGG	-	Chr5:103459070-103459089	None:intergenic	50.0%
	CGCTGAGATTGAAGCAGAGA+AGG	+	Chr5:103459803-103459822	MsG0580029890.01.T01:CDS	50.0%
	CGTTGAGGATCCTTGTACTG+TGG	+	Chr5:103458915-103458934	MsG0580029890.01.T01:CDS	50.0%
	GAATGGTCTGCGTCAACTAG+AGG	+	Chr5:103459758-103459777	MsG0580029890.01.T01:CDS	50.0%
	GCTGTGATGACCAAGGAGAA+TGG	+	Chr5:103459741-103459760	MsG0580029890.01.T01:CDS	50.0%
	GCTTGGAAAGCTAACGCAAC+CGG	+	Chr5:103459090-103459109	MsG0580029890.01.T01:CDS	50.0%
	TTGACGCAGACCATTCTCCT+TGG	-	Chr5:103459754-103459773	None:intergenic	50.0%
	TTGGTACAAAGACGGTGACC+CGG	-	Chr5:103459046-103459065	None:intergenic	50.0%
	TTGTACCAAACCGACCCTTC+CGG	+	Chr5:103459057-103459076	MsG0580029890.01.T01:CDS	50.0%
!	CGACCCTTCCGGTACATTTT+CGG	+	Chr5:103459068-103459087	MsG0580029890.01.T01:CDS	50.0%
!	CTTCCGGTACATTTTCGGCT+TGG	+	Chr5:103459073-103459092	MsG0580029890.01.T01:CDS	50.0%
!!	GGGTCGGTTTGGTACAAAGA+CGG	-	Chr5:103459054-103459073	None:intergenic	50.0%
	AAAGACGGTGACCCGGTGTA+AGG	-	Chr5:103459039-103459058	None:intergenic	55.0%
	AGACAACGTCGTTCTCTGCG+TGG	+	Chr5:103458409-103458428	MsG0580029890.01.T01:CDS	55.0%
	AGCGGCGTTACCTTTGCGAA+CGG	-	Chr5:103458372-103458391	None:intergenic	55.0%
	AGTAGTGGTGTGCGGCCATT+TGG	+	Chr5:103458985-103459004	MsG0580029890.01.T01:CDS	55.0%
	ATGTACCGGAAGGGTCGGTT+TGG	-	Chr5:103459065-103459084	None:intergenic	55.0%
	CAACTCGGGCCCGGTTTATA+AGG	-	Chr5:103458873-103458892	None:intergenic	55.0%
	CGAGTCTTGCAGTTTGGCAG+CGG	-	Chr5:103458444-103458463	None:intergenic	55.0%
	CTGCCAAACTGCAAGACTCG+AGG	+	Chr5:103458444-103458463	MsG0580029890.01.T01:CDS	55.0%
	GCTCTTGAAGCCGTTCGCAA+AGG	+	Chr5:103458359-103458378	MsG0580029890.01.T01:CDS	55.0%
	GGCTATCAGCTCGTTGCTTG+AGG	+	Chr5:103459188-103459207	MsG0580029890.01.T01:CDS	55.0%
	GGGCTTTCGACGTTGATCGT+TGG	+	Chr5:103459006-103459025	MsG0580029890.01.T01:CDS	55.0%
	GTAGTGGTGTGCGGCCATTT+GGG	+	Chr5:103458986-103459005	MsG0580029890.01.T01:CDS	55.0%
	TGTACCTCGAACGCCAACAG+CGG	-	Chr5:103458390-103458409	None:intergenic	55.0%
	AGCAGAGAAGGCAGCTGCTG+AGG	+	Chr5:103459815-103459834	MsG0580029890.01.T01:CDS	60.0%
	CGCAAAGGTAACGCCGCTGT+TGG	+	Chr5:103458374-103458393	MsG0580029890.01.T01:CDS	60.0%
	TCTGGCATTCAACTCGGGCC+CGG	-	Chr5:103458882-103458901	None:intergenic	60.0%
	AACGCCGCTGTTGGCGTTCG+AGG	+	Chr5:103458383-103458402	MsG0580029890.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	103458293	103459869	103458293	ID=MsG0580029890.01;Name=MsG0580029890.01
Chr5	mRNA	103458293	103459869	103458293	ID=MsG0580029890.01.T01;Parent=MsG0580029890.01;Name=MsG0580029890.01.T01;_AED=0.19;_eAED=0.19;_QI=0\|0\|0\|1\|1\|1\|3\|0\|249
Chr5	exon	103458293	103458465	103458293	ID=MsG0580029890.01.T01:exon:7057;Parent=MsG0580029890.01.T01
Chr5	exon	103458795	103459209	103458795	ID=MsG0580029890.01.T01:exon:7058;Parent=MsG0580029890.01.T01
Chr5	exon	103459708	103459869	103459708	ID=MsG0580029890.01.T01:exon:7059;Parent=MsG0580029890.01.T01
Chr5	CDS	103458293	103458465	103458293	ID=MsG0580029890.01.T01:cds;Parent=MsG0580029890.01.T01
Chr5	CDS	103458795	103459209	103458795	ID=MsG0580029890.01.T01:cds;Parent=MsG0580029890.01.T01
Chr5	CDS	103459708	103459869	103459708	ID=MsG0580029890.01.T01:cds;Parent=MsG0580029890.01.T01

Gene Sequence

>MsG0580029890.01.T01

ATGTCTCGGTATGATAGAGCTATCACAGTTTTCTCTCCTGATGGTCATCTCTTCCAAGTAGAGTATGCTCTTGAAGCCGTTCGCAAAGGTAACGCCGCTGTTGGCGTTCGAGGTACAGACAACGTCGTTCTCTGCGTGGAGAAAAAATCCGCTGCCAAACTGCAAGACTCGAGATTGGTGAGGAAGATTGTTAGTTTGGATGATCATGTTGCTCTTGCTTGTGCTGGACTAAAAGCCGATGCTCGTGTCCTTATAAACCGGGCCCGAGTTGAATGCCAGAGTCATAGACTTACCGTTGAGGATCCTTGTACTGTGGAATACATAACCCGTTACATTGCAGGTCTTCAGCAAAAGTACACACAGAGTAGTGGTGTGCGGCCATTTGGGCTTTCGACGTTGATCGTTGGTTTTGATCCTTACACCGGGTCACCGTCTTTGTACCAAACCGACCCTTCCGGTACATTTTCGGCTTGGAAAGCTAACGCAACCGGAAGAAACTCAAGTTCAATCCGTGAGTTTCTAGAGAAGAACTATAAAGACACCTCTGGGCAAGAAACTGTCAAATTGGCTATCAGCTCGTTGCTTGAGGTTGTTGAGAGTGGAGGGAAGAACATTGAAGTTGCTGTGATGACCAAGGAGAATGGTCTGCGTCAACTAGAGGAAGCTGAAATTGACGCCATTGTCGCTGAGATTGAAGCAGAGAAGGCAGCTGCTGAGGCTGCAAAGAAAGTTCCTCCCAAGGACACATGA

Protein sequence

>MsG0580029890.01.T01

MSRYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDNVVLCVEKKSAAKLQDSRLVRKIVSLDDHVALACAGLKADARVLINRARVECQSHRLTVEDPCTVEYITRYIAGLQQKYTQSSGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSSSIREFLEKNYKDTSGQETVKLAISSLLEVVESGGKNIEVAVMTKENGLRQLEEAEIDAIVAEIEAEKAAAEAAKKVPPKDT*