AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000135.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000135.01.T01 MTR_1g022410 97.887 284 3 1 1 281 1 284 0.0 573
MsG0180000135.01.T01 MTR_4g012740 78.571 322 25 3 1 281 232 550 2.55e-163 465
MsG0180000135.01.T01 MTR_4g012740 64.773 88 16 2 1 73 1 88 1.51e-24 103
MsG0180000135.01.T01 MTR_4g012740 63.636 88 17 2 1 73 78 165 2.18e-24 102
MsG0180000135.01.T01 MTR_4g012740 63.636 88 17 2 1 73 155 242 2.18e-24 102
MsG0180000135.01.T01 MTR_4g057090 70.175 285 55 4 1 281 83 341 6.78e-124 357
MsG0180000135.01.T01 MTR_3g113730 87.805 164 18 1 118 281 4 165 3.92e-103 298
MsG0180000135.01.T01 MTR_1g112250 45.902 183 94 2 1 178 3 185 7.84e-47 157
MsG0180000135.01.T01 MTR_7g070070 38.785 214 125 3 5 214 4 215 4.07e-43 147
MsG0180000135.01.T01 MTR_5g016590 38.785 214 125 3 5 214 4 215 6.52e-43 147
MsG0180000135.01.T01 MTR_0167s0060 35.111 225 141 3 1 223 1 222 2.23e-41 143
MsG0180000135.01.T01 MTR_6g024135 40.838 191 108 3 6 193 8 196 1.05e-38 136
MsG0180000135.01.T01 MTR_2g060830 34.348 230 145 5 6 230 9 237 1.66e-38 135
MsG0180000135.01.T01 MTR_8g464460 35.217 230 143 5 6 230 9 237 2.32e-38 135
MsG0180000135.01.T01 MTR_8g075320 37.736 212 123 4 5 210 3 211 8.52e-38 134
MsG0180000135.01.T01 MTR_2g016050 35.681 213 128 4 4 210 2 211 4.44e-35 127
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000135.01.T01 AT1G47250 78.445 283 53 2 1 281 1 277 6.50e-160 446
MsG0180000135.01.T01 AT5G42790 86.134 238 33 0 1 238 1 238 6.87e-159 443
MsG0180000135.01.T01 AT1G53850 38.819 237 135 4 1 232 3 234 2.48e-46 155
MsG0180000135.01.T01 AT1G53850 38.819 237 135 4 1 232 3 234 2.48e-46 155
MsG0180000135.01.T01 AT3G14290 45.355 183 95 2 1 178 3 185 2.51e-46 155
MsG0180000135.01.T01 AT3G22110 36.017 236 141 4 5 232 4 237 2.50e-43 148
MsG0180000135.01.T01 AT1G16470 36.444 225 138 3 1 223 1 222 2.46e-40 140
MsG0180000135.01.T01 AT1G16470 36.444 225 138 3 1 223 1 222 2.46e-40 140
MsG0180000135.01.T01 AT1G79210 36.000 225 139 3 1 223 1 222 7.39e-40 139
MsG0180000135.01.T01 AT1G79210 36.000 225 139 3 1 223 1 222 7.39e-40 139
MsG0180000135.01.T01 AT1G79210 36.000 225 139 3 1 223 1 222 7.39e-40 139
MsG0180000135.01.T01 AT5G35590 34.348 230 145 5 6 230 9 237 2.00e-38 135
MsG0180000135.01.T01 AT5G66140 38.208 212 122 4 5 210 3 211 4.19e-37 132
MsG0180000135.01.T01 AT2G05840 34.348 230 145 5 6 230 9 237 4.44e-37 132
MsG0180000135.01.T01 AT3G51260 37.264 212 124 4 5 210 3 211 5.65e-36 129
MsG0180000135.01.T01 AT3G51260 37.264 212 124 4 5 210 3 211 6.59e-36 129
MsG0180000135.01.T01 AT2G05840 36.181 199 123 3 6 200 9 207 1.43e-35 127
MsG0180000135.01.T01 AT2G27020 37.895 190 115 2 6 193 8 196 8.33e-35 126
MsG0180000135.01.T01 AT2G05840 36.170 188 116 3 6 189 9 196 1.21e-33 122
MsG0180000135.01.T01 AT2G27020 37.895 190 115 2 6 193 110 298 1.81e-33 125
MsG0180000135.01.T01 AT4G15165 33.654 208 87 7 5 204 4 168 2.40e-25 100

Find 99 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATACTATTTACTGAAATTC+TGG 0.204686 1:+1930919 MsG0180000135.01.T01:three_prime_UTR
TGGTGAGCCTTTCCACATTT+TGG 0.215333 1:+1930522 MsG0180000135.01.T01:CDS
CGCGAGAACCACGTGAGTTT+TGG 0.220139 1:-1927475 None:intergenic
ACAAGCTGCAAAGACATATT+TGG 0.303194 1:+1930369 MsG0180000135.01.T01:CDS
TCCTGCTCAGCTGCAGCCTC+AGG 0.321152 1:-1930616 None:intergenic
TAACCTAACCTGAGCCTTAT+CGG 0.340591 1:-1927694 None:intergenic
ACTGTTATTTGAAAATGAAT+AGG 0.340974 1:+1930752 MsG0180000135.01.T01:three_prime_UTR
GCTGCCACAGATCAGGCTTC+TGG 0.352014 1:+1930640 MsG0180000135.01.T01:CDS
CGATCATGGAAGCGTCCTTA+TGG 0.372743 1:+1930238 MsG0180000135.01.T01:CDS
ATGAGAAGATAGTTCAGAAT+TGG 0.382855 1:-1927511 None:intergenic
GTAGCTGGATTAGATGAATC+AGG 0.390011 1:+1930274 MsG0180000135.01.T01:CDS
GGCGTTGGACTTCTAGTAGC+TGG 0.403744 1:+1930259 MsG0180000135.01.T01:CDS
CGCTTGGGCAGTTGTAATAG+AGG 0.407257 1:-1930303 None:intergenic
GCTGCAGCCTCAGGTTCAGC+AGG 0.411570 1:-1930607 None:intergenic
TATCAACAATCGGGTCCCTT+TGG 0.415540 1:+1930983 MsG0180000135.01.T01:three_prime_UTR
TATTTCTTAATATCAACAAT+CGG 0.423419 1:+1930973 MsG0180000135.01.T01:three_prime_UTR
TTCTGGAAAATGTTGATTGA+AGG 0.425628 1:+1930936 MsG0180000135.01.T01:three_prime_UTR
ACCTGAGGCTGCAGCTGAGC+AGG 0.426509 1:+1930615 MsG0180000135.01.T01:CDS
TCATCAGAAGAAGATCTTCA+AGG 0.432131 1:+1927530 MsG0180000135.01.T01:CDS
TAGATAAAATTGTAAATAGT+AGG 0.434101 1:-1930895 None:intergenic
GCAGGATGCTGCCACAGATC+AGG 0.446173 1:+1930633 MsG0180000135.01.T01:CDS
AAGCAAGGTTCAGCAGCAAT+AGG 0.446969 1:+1927444 MsG0180000135.01.T01:CDS
ACCGGCGGGAAGACTCTTCC+AGG 0.447398 1:+1927398 MsG0180000135.01.T01:CDS
CATCTTTGATCAGATCTTCC+CGG 0.448900 1:-1930423 None:intergenic
CAGATCAAAGTGGTGCTGGT+GGG 0.452356 1:+1930665 MsG0180000135.01.T01:CDS
GCCGATCACAAAATCAAAAT+CGG 0.458938 1:+1927332 MsG0180000135.01.T01:five_prime_UTR
CCTTGCAAGGTGAAAAGCTC+AGG 0.463589 1:+1930467 MsG0180000135.01.T01:CDS
GCATTCAGATCTCATGTAAC+GGG 0.468182 1:-1927610 None:intergenic
GATCAGATCTTCCCGGGAGG+AGG 0.468370 1:-1930416 None:intergenic
ACGGCCATCGGCGGTGAGAC+CGG 0.470971 1:-1927580 None:intergenic
GGTGCTGGTGGGGCTGACCA+AGG 0.471608 1:+1930676 MsG0180000135.01.T01:CDS
CTTAAATATCAAATCTCCAT+TGG 0.477025 1:-1930706 None:intergenic
TTGTTTCTGAAATTCATCCA+TGG 0.477573 1:+1930836 MsG0180000135.01.T01:three_prime_UTR
ATTTCTTAATATCAACAATC+GGG 0.480176 1:+1930974 MsG0180000135.01.T01:three_prime_UTR
GCAGATCAAAGTGGTGCTGG+TGG 0.482449 1:+1930664 MsG0180000135.01.T01:CDS
TCTGGAAAATGTTGATTGAA+GGG 0.484254 1:+1930937 MsG0180000135.01.T01:three_prime_UTR
CGTCGTTCAGCTCGCCGATA+AGG 0.485800 1:+1927680 MsG0180000135.01.T01:CDS
ATTCAAAATAGTTTCCGCTT+GGG 0.489662 1:-1930318 None:intergenic
ACTAGAAGTCCAACGCCATA+AGG 0.491926 1:-1930253 None:intergenic
AGGTTTGCACTCAGCGATCA+TGG 0.494067 1:+1930224 MsG0180000135.01.T01:intron
ACAACTTCACAGCCTCCTCC+CGG 0.497935 1:+1930404 MsG0180000135.01.T01:CDS
GAATATCAGGCATTTGCAAT+CGG 0.498552 1:+1930337 MsG0180000135.01.T01:CDS
CTTCCATGGCGTATTCCACC+TGG 0.500589 1:-1927416 None:intergenic
TATTCAAAATAGTTTCCGCT+TGG 0.508568 1:-1930319 None:intergenic
ACCATTGCTGTGGTTGGAGT+TGG 0.514251 1:+1930502 MsG0180000135.01.T01:CDS
AAATTGTAAATAGTAGGTTC+AGG 0.514635 1:-1930889 None:intergenic
TTCAAGGTTGATGATCATAT+CGG 0.515192 1:+1927546 MsG0180000135.01.T01:CDS
ATCTTTGATCAGATCTTCCC+GGG 0.521887 1:-1930422 None:intergenic
AAGATGCACTCATTGCAACT+AGG 0.529448 1:+1930440 MsG0180000135.01.T01:CDS
AGATCAAAGTGGTGCTGGTG+GGG 0.531118 1:+1930666 MsG0180000135.01.T01:CDS
GGTGCAGATCAAAGTGGTGC+TGG 0.531835 1:+1930661 MsG0180000135.01.T01:CDS
TTTCAAGTTGAGTGTGTCAT+GGG 0.533952 1:+1930775 MsG0180000135.01.T01:three_prime_UTR
TGGAAGCGTCCTTATGGCGT+TGG 0.534162 1:+1930244 MsG0180000135.01.T01:CDS
AACCACAGCAATGGTGCATA+CGG 0.536605 1:-1930494 None:intergenic
CTCTATTACAACTGCCCAAG+CGG 0.540260 1:+1930304 MsG0180000135.01.T01:CDS
ACGAGTCTACCAACGGGAAG+CGG 0.541672 1:-1927660 None:intergenic
GTTTCAAGTTGAGTGTGTCA+TGG 0.550390 1:+1930774 MsG0180000135.01.T01:three_prime_UTR
AGATGCACTCATTGCAACTA+GGG 0.552459 1:+1930441 MsG0180000135.01.T01:CDS
CTGGAAAATGTTGATTGAAG+GGG 0.552537 1:+1930938 MsG0180000135.01.T01:three_prime_UTR
TCAGCTCGCCGATAAGGCTC+AGG 0.552948 1:+1927686 MsG0180000135.01.T01:CDS
CATATCGGCGTTGCCATCGC+CGG 0.553468 1:+1927561 MsG0180000135.01.T01:CDS
GTATGCACCATTGCTGTGGT+TGG 0.557714 1:+1930496 MsG0180000135.01.T01:CDS
ATCGCCGGTCTCACCGCCGA+TGG 0.557766 1:+1927576 MsG0180000135.01.T01:CDS
TATTTAAGATCCAGTACTTG+AGG 0.559400 1:+1930721 MsG0180000135.01.T01:three_prime_UTR
ACCTTGCTTAACTGCTTCCA+TGG 0.560856 1:-1927430 None:intergenic
TGCATTCAGATCTCATGTAA+CGG 0.564752 1:-1927611 None:intergenic
CGACGTAACAACATGGTCAC+CGG 0.568536 1:+1927380 MsG0180000135.01.T01:CDS
TGAACGACGAGTCTACCAAC+GGG 0.572203 1:-1927666 None:intergenic
TAGCTGGATTAGATGAATCA+GGG 0.572392 1:+1930275 MsG0180000135.01.T01:CDS
ACGGGAAAGAACACGGCCAT+CGG 0.576909 1:-1927592 None:intergenic
CAGTTTCCTGATCCAAAATG+TGG 0.582560 1:-1930534 None:intergenic
TATGAATCTCCGCTTCCCGT+TGG 0.585267 1:+1927651 MsG0180000135.01.T01:CDS
AGCTGCACCTGCTGAACCTG+AGG 0.586152 1:+1930600 MsG0180000135.01.T01:CDS
CAACTTCACAGCCTCCTCCC+GGG 0.586785 1:+1930405 MsG0180000135.01.T01:CDS
TGACCAAGGTGGTTCTCCAA+TGG 0.586988 1:+1930690 MsG0180000135.01.T01:CDS
ATCGGCGGTGAGACCGGCGA+TGG 0.592757 1:-1927574 None:intergenic
TCCTGATCCAAAATGTGGAA+AGG 0.593184 1:-1930529 None:intergenic
ACCAACTCCAACCACAGCAA+TGG 0.594452 1:-1930503 None:intergenic
GCTGGTGGGGCTGACCAAGG+TGG 0.603851 1:+1930679 MsG0180000135.01.T01:CDS
ACGTTCACAGTGATCAGCCA+TGG 0.604530 1:-1930853 None:intergenic
CTTCCAGGTGGAATACGCCA+TGG 0.612270 1:+1927413 MsG0180000135.01.T01:CDS
CTCCGTATGCACCATTGCTG+TGG 0.615712 1:+1930492 MsG0180000135.01.T01:CDS
GCAACTAGGGAGTCCTTGCA+AGG 0.618439 1:+1930454 MsG0180000135.01.T01:CDS
TCTCCATTGGAGAACCACCT+TGG 0.619130 1:-1930693 None:intergenic
ACCTGGAAGAGTCTTCCCGC+CGG 0.625765 1:-1927399 None:intergenic
GTAACAACATGGTCACCGGC+GGG 0.626802 1:+1927384 MsG0180000135.01.T01:CDS
CGTAACAACATGGTCACCGG+CGG 0.638962 1:+1927383 MsG0180000135.01.T01:CDS
GGAAAGAACACGGCCATCGG+CGG 0.645115 1:-1927589 None:intergenic
TGCACCAGAAGCCTGATCTG+TGG 0.645294 1:-1930644 None:intergenic
TCATGTAACGGGAAAGAACA+CGG 0.645339 1:-1927599 None:intergenic
CTGAACGACGAGTCTACCAA+CGG 0.653690 1:-1927667 None:intergenic
ACGATACCGACGTAACAACA+TGG 0.654506 1:+1927373 MsG0180000135.01.T01:CDS
GCCATGGAAGCAGTTAAGCA+AGG 0.656151 1:+1927429 MsG0180000135.01.T01:CDS
AGCTGGATTAGATGAATCAG+GGG 0.660204 1:+1930276 MsG0180000135.01.T01:CDS
CGGTGACCATGTTGTTACGT+CGG 0.692398 1:-1927379 None:intergenic
GCTTCTGGTGCAGATCAAAG+TGG 0.697173 1:+1930655 MsG0180000135.01.T01:CDS
GGCGGGAAGACTCTTCCAGG+TGG 0.706418 1:+1927401 MsG0180000135.01.T01:CDS
TCTCCGATCCAAAACTCACG+TGG 0.728289 1:+1927467 MsG0180000135.01.T01:CDS
TTTGATCAGATCTTCCCGGG+AGG 0.729135 1:-1930419 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTAAATTAAGTAATTTTAA+TGG + Chr1:1927818-1927837 MsG0180000135.01.T01:intron 10.0%
!! AAATAATAACAAAATCAAAC+AGG - Chr1:1928539-1928558 None:intergenic 15.0%
!! ATTCAATAAACTAAAACATT+TGG + Chr1:1929989-1930008 MsG0180000135.01.T01:intron 15.0%
!! TAGATAAAATTGTAAATAGT+AGG - Chr1:1930898-1930917 None:intergenic 15.0%
!! TATTTCTTAATATCAACAAT+CGG + Chr1:1930973-1930992 MsG0180000135.01.T01:three_prime_UTR 15.0%
!!! ACTATTTTGTATACTTAATA+TGG + Chr1:1929015-1929034 MsG0180000135.01.T01:intron 15.0%
!! AAACATTAGAGAATACATTT+CGG - Chr1:1928366-1928385 None:intergenic 20.0%
!! AAATACAGTGTTAACAAAAA+GGG - Chr1:1927965-1927984 None:intergenic 20.0%
!! ATATAGAAACAGCATAAATA+GGG - Chr1:1929935-1929954 None:intergenic 20.0%
!! ATATTACATGGAAAAGAATA+AGG + Chr1:1930130-1930149 MsG0180000135.01.T01:intron 20.0%
!! ATTTCTTAATATCAACAATC+GGG + Chr1:1930974-1930993 MsG0180000135.01.T01:three_prime_UTR 20.0%
!! CAAAATTACATCATAAATAC+TGG - Chr1:1930198-1930217 None:intergenic 20.0%
!! TATATAGAAACAGCATAAAT+AGG - Chr1:1929936-1929955 None:intergenic 20.0%
!! TTCTCTAATGTTTACTATAT+AGG + Chr1:1928373-1928392 MsG0180000135.01.T01:intron 20.0%
!! TTTAACTCAGTAATTCAATT+AGG + Chr1:1927796-1927815 MsG0180000135.01.T01:intron 20.0%
!!! ACTGTTATTTGAAAATGAAT+AGG + Chr1:1930752-1930771 MsG0180000135.01.T01:three_prime_UTR 20.0%
!!! ATTTATGATGTAATTTTGAG+TGG + Chr1:1930200-1930219 MsG0180000135.01.T01:intron 20.0%
!!! TGTGTTTTATAATAGAAAGT+TGG + Chr1:1930061-1930080 MsG0180000135.01.T01:intron 20.0%
! AAAAAATAAGCCAATCCAAA+GGG + Chr1:1928186-1928205 MsG0180000135.01.T01:intron 25.0%
! AAAATACTATGATGCTTCTA+TGG + Chr1:1928497-1928516 MsG0180000135.01.T01:intron 25.0%
! AAATTGTAAATAGTAGGTTC+AGG - Chr1:1930892-1930911 None:intergenic 25.0%
! ACACACATTTATATACTTCT+GGG - Chr1:1928942-1928961 None:intergenic 25.0%
! AGGTACAAAAATTATTTCAC+AGG - Chr1:1928845-1928864 None:intergenic 25.0%
! ATCTTATCTTGCATATTACA+TGG + Chr1:1930118-1930137 MsG0180000135.01.T01:intron 25.0%
! ATTGAATGATTAAATAGACC+AGG - Chr1:1929976-1929995 None:intergenic 25.0%
! ATTTATATACTTCTGGGTAT+AGG - Chr1:1928936-1928955 None:intergenic 25.0%
! CAAATACAGTGTTAACAAAA+AGG - Chr1:1927966-1927985 None:intergenic 25.0%
! CTTAAATATCAAATCTCCAT+TGG - Chr1:1930709-1930728 None:intergenic 25.0%
! GATACTATTTACTGAAATTC+TGG + Chr1:1930919-1930938 MsG0180000135.01.T01:three_prime_UTR 25.0%
! GTATACTTAATATGGAAGTA+GGG + Chr1:1929023-1929042 MsG0180000135.01.T01:intron 25.0%
! TAAAAAATAAGCCAATCCAA+AGG + Chr1:1928185-1928204 MsG0180000135.01.T01:intron 25.0%
! TAGTCGAGATTATTTACTTT+AGG + Chr1:1927904-1927923 MsG0180000135.01.T01:intron 25.0%
! TATAGAAACAGCATAAATAG+GGG - Chr1:1929934-1929953 None:intergenic 25.0%
! TATTATTCATAAGCTTGTCA+AGG + Chr1:1928075-1928094 MsG0180000135.01.T01:intron 25.0%
! TGTATACTTAATATGGAAGT+AGG + Chr1:1929022-1929041 MsG0180000135.01.T01:intron 25.0%
! TGTTCGGATTATTCTAATTA+GGG + Chr1:1927744-1927763 MsG0180000135.01.T01:intron 25.0%
! TTATAATAGAAAGTTGGACA+GGG + Chr1:1930067-1930086 MsG0180000135.01.T01:intron 25.0%
! TTGTTCGGATTATTCTAATT+AGG + Chr1:1927743-1927762 MsG0180000135.01.T01:intron 25.0%
! TTTATAATAGAAAGTTGGAC+AGG + Chr1:1930066-1930085 MsG0180000135.01.T01:intron 25.0%
!! AAACGTTTGAAACTATGTTT+AGG + Chr1:1928325-1928344 MsG0180000135.01.T01:intron 25.0%
!! ATCATACTCTTTTTGATGTT+TGG + Chr1:1928765-1928784 MsG0180000135.01.T01:intron 25.0%
!! ATTTGGTTAGTTAATCAACA+TGG + Chr1:1930006-1930025 MsG0180000135.01.T01:intron 25.0%
!! TGATTTGACTTAACTCTTAT+GGG + Chr1:1929841-1929860 MsG0180000135.01.T01:intron 25.0%
!! TGTTTCAGTTTTCAATTTGT+TGG + Chr1:1928220-1928239 MsG0180000135.01.T01:intron 25.0%
!!! CATCAAAAAGAGTATGATTT+TGG - Chr1:1928763-1928782 None:intergenic 25.0%
!!! TAAAGTGTTAACAACACTTT+TGG + Chr1:1929897-1929916 MsG0180000135.01.T01:intron 25.0%
!!! TGACAGTCATTTTGTATTTA+AGG - Chr1:1929376-1929395 None:intergenic 25.0%
!!! TGTAAATGTTGTTTTGATAG+TGG + Chr1:1929116-1929135 MsG0180000135.01.T01:intron 25.0%
ACGGTGTAGTTATTCAAATT+GGG + Chr1:1929200-1929219 MsG0180000135.01.T01:intron 30.0%
ATAGTTACTATATGTGAACC+TGG + Chr1:1929955-1929974 MsG0180000135.01.T01:intron 30.0%
ATGAGAAGATAGTTCAGAAT+TGG - Chr1:1927514-1927533 None:intergenic 30.0%
ATTCAAAATAGTTTCCGCTT+GGG - Chr1:1930321-1930340 None:intergenic 30.0%
CAAAAATAAGCCAATCCAAA+TGG - Chr1:1928027-1928046 None:intergenic 30.0%
CACACACATTTATATACTTC+TGG - Chr1:1928943-1928962 None:intergenic 30.0%
CATATGATAGAGATTAGAGA+CGG + Chr1:1929168-1929187 MsG0180000135.01.T01:intron 30.0%
GACAGTGATTAGAATGAAAT+GGG + Chr1:1927985-1928004 MsG0180000135.01.T01:intron 30.0%
TAATTGTGATTGAGAGAAGA+TGG + Chr1:1928276-1928295 MsG0180000135.01.T01:intron 30.0%
TACGGTGTAGTTATTCAAAT+TGG + Chr1:1929199-1929218 MsG0180000135.01.T01:intron 30.0%
TATCTTACTTTCATTCTCTG+TGG + Chr1:1929333-1929352 MsG0180000135.01.T01:intron 30.0%
TATTCAAAATAGTTTCCGCT+TGG - Chr1:1930322-1930341 None:intergenic 30.0%
TGACAGTGATTAGAATGAAA+TGG + Chr1:1927984-1928003 MsG0180000135.01.T01:intron 30.0%
TGATTTACTTAGCATTGTAG+TGG + Chr1:1929471-1929490 MsG0180000135.01.T01:intron 30.0%
TTGAATGTCTTGAGAATTTG+AGG + Chr1:1928557-1928576 MsG0180000135.01.T01:intron 30.0%
! AAATTGTAGCTAGGGTTTTT+AGG + Chr1:1927772-1927791 MsG0180000135.01.T01:intron 30.0%
! AATTGTAGCTAGGGTTTTTA+GGG + Chr1:1927773-1927792 MsG0180000135.01.T01:intron 30.0%
! ATAATGACACGTTCTACTTT+TGG - Chr1:1928419-1928438 None:intergenic 30.0%
! CAGAAGTATATAAATGTGTG+TGG + Chr1:1928941-1928960 MsG0180000135.01.T01:intron 30.0%
! CTGATTTGACTTAACTCTTA+TGG + Chr1:1929840-1929859 MsG0180000135.01.T01:intron 30.0%
! CTTTTTGATGTTTGGTTGTT+TGG + Chr1:1928773-1928792 MsG0180000135.01.T01:intron 30.0%
! TATTTAAGATCCAGTACTTG+AGG + Chr1:1930721-1930740 MsG0180000135.01.T01:three_prime_UTR 30.0%
! TCTGGAAAATGTTGATTGAA+GGG + Chr1:1930937-1930956 MsG0180000135.01.T01:three_prime_UTR 30.0%
! TTCTGGAAAATGTTGATTGA+AGG + Chr1:1930936-1930955 MsG0180000135.01.T01:three_prime_UTR 30.0%
!! CGGAAACTATTTTGAATATC+AGG + Chr1:1930324-1930343 MsG0180000135.01.T01:CDS 30.0%
!! GATTTGATTTGTTATGCTTG+TGG + Chr1:1927862-1927881 MsG0180000135.01.T01:intron 30.0%
!! GTATGATTTTGGCAAAATCA+CGG - Chr1:1928752-1928771 None:intergenic 30.0%
!! TAACTTGCTTGTAGAATAAC+TGG + Chr1:1929763-1929782 MsG0180000135.01.T01:intron 30.0%
!! TGTTTTGTTACGATCCATTA+TGG + Chr1:1929265-1929284 MsG0180000135.01.T01:intron 30.0%
!! TTCAAGGTTGATGATCATAT+CGG + Chr1:1927546-1927565 MsG0180000135.01.T01:CDS 30.0%
!! TTGTTTCTGAAATTCATCCA+TGG + Chr1:1930836-1930855 MsG0180000135.01.T01:three_prime_UTR 30.0%
!!! GAGAATTTGAGGTTTTTAGT+TGG + Chr1:1928568-1928587 MsG0180000135.01.T01:intron 30.0%
!!! TCCGATTTTGATTTTGTGAT+CGG - Chr1:1927336-1927355 None:intergenic 30.0%
!!! TGATACTTTTGAGATTGTGA+GGG + Chr1:1930570-1930589 MsG0180000135.01.T01:CDS 30.0%
!!! TTGATACTTTTGAGATTGTG+AGG + Chr1:1930569-1930588 MsG0180000135.01.T01:CDS 30.0%
AACAGAGGTAAAACGGAAAA+CGG - Chr1:1927724-1927743 None:intergenic 35.0%
ACAAGCTGCAAAGACATATT+TGG + Chr1:1930369-1930388 MsG0180000135.01.T01:CDS 35.0%
AGAATAATCCGAACAAACAG+AGG - Chr1:1927739-1927758 None:intergenic 35.0%
AGTTCCGTTGACATTCATTA+GGG - Chr1:1929239-1929258 None:intergenic 35.0%
ATATACTTCTGGGTATAGGT+TGG - Chr1:1928932-1928951 None:intergenic 35.0%
ATCCATTATGGATGTTCTAG+GGG + Chr1:1929277-1929296 MsG0180000135.01.T01:intron 35.0%
ATGTCATTCTTTGATGCATC+TGG + Chr1:1929407-1929426 MsG0180000135.01.T01:intron 35.0%
CAGTGTTAACAAAAAGGGTT+TGG - Chr1:1927960-1927979 None:intergenic 35.0%
CATCACTTTGAGCTGTTATT+TGG + Chr1:1928987-1929006 MsG0180000135.01.T01:intron 35.0%
GAAAACTGAAACAGACACTA+AGG - Chr1:1928213-1928232 None:intergenic 35.0%
GAATATCAGGCATTTGCAAT+CGG + Chr1:1930337-1930356 MsG0180000135.01.T01:CDS 35.0%
GATCCATTATGGATGTTCTA+GGG + Chr1:1929276-1929295 MsG0180000135.01.T01:intron 35.0%
GCCGATCACAAAATCAAAAT+CGG + Chr1:1927332-1927351 MsG0180000135.01.T01:five_prime_UTR 35.0%
TATGATGCTTCTATGGTGTT+TGG + Chr1:1928504-1928523 MsG0180000135.01.T01:intron 35.0%
TCATCAGAAGAAGATCTTCA+AGG + Chr1:1927530-1927549 MsG0180000135.01.T01:CDS 35.0%
TGCATTCAGATCTCATGTAA+CGG - Chr1:1927614-1927633 None:intergenic 35.0%
TGTCATTATTTCCTCTCCTT+TGG + Chr1:1928430-1928449 MsG0180000135.01.T01:intron 35.0%
TTCACTTTCCCATTACTATG+AGG - Chr1:1929307-1929326 None:intergenic 35.0%
! CTGGAAAATGTTGATTGAAG+GGG + Chr1:1930938-1930957 MsG0180000135.01.T01:three_prime_UTR 35.0%
! GTTTTTAACACCTCAAGTAC+TGG - Chr1:1930734-1930753 None:intergenic 35.0%
! TAGCTGGATTAGATGAATCA+GGG + Chr1:1930275-1930294 MsG0180000135.01.T01:CDS 35.0%
!! ACTTTAGGATCTTAACTGAG+TGG + Chr1:1927919-1927938 MsG0180000135.01.T01:intron 35.0%
!! ATGATGTAATTTTGAGTGGC+AGG + Chr1:1930204-1930223 MsG0180000135.01.T01:intron 35.0%
!! TTTCAAGTTGAGTGTGTCAT+GGG + Chr1:1930775-1930794 MsG0180000135.01.T01:three_prime_UTR 35.0%
!!! AGGGTTTTGAAATTGTAGCT+AGG + Chr1:1927763-1927782 MsG0180000135.01.T01:intron 35.0%
!!! CAATCTAGAGGGAGTATTTT+CGG + Chr1:1928302-1928321 MsG0180000135.01.T01:intron 35.0%
!!! GGGTTTTGAAATTGTAGCTA+GGG + Chr1:1927764-1927783 MsG0180000135.01.T01:intron 35.0%
!!! TCAGTTTTCAATTTGTTGGC+TGG + Chr1:1928224-1928243 MsG0180000135.01.T01:intron 35.0%
AAACAGCATAAATAGGGGAG+GGG - Chr1:1929929-1929948 None:intergenic 40.0%
AAGATGCACTCATTGCAACT+AGG + Chr1:1930440-1930459 MsG0180000135.01.T01:CDS 40.0%
AATAGAAAGTTGGACAGGGT+GGG + Chr1:1930071-1930090 MsG0180000135.01.T01:intron 40.0%
AGAAACAGCATAAATAGGGG+AGG - Chr1:1929931-1929950 None:intergenic 40.0%
AGAAGATGGAAGCAATCTAG+AGG + Chr1:1928290-1928309 MsG0180000135.01.T01:intron 40.0%
AGATGCACTCATTGCAACTA+GGG + Chr1:1930441-1930460 MsG0180000135.01.T01:CDS 40.0%
AGATTCAGGTCCATTTGGAT+TGG + Chr1:1928014-1928033 MsG0180000135.01.T01:intron 40.0%
ATCTTTGATCAGATCTTCCC+GGG - Chr1:1930425-1930444 None:intergenic 40.0%
ATGCATAGAGAATCCTGAAG+GGG + Chr1:1929609-1929628 MsG0180000135.01.T01:intron 40.0%
ATTGTCTAAACTGTCGTGAG+AGG + Chr1:1929533-1929552 MsG0180000135.01.T01:intron 40.0%
CAGTTCCGTTGACATTCATT+AGG - Chr1:1929240-1929259 None:intergenic 40.0%
CAGTTTCCTGATCCAAAATG+TGG - Chr1:1930537-1930556 None:intergenic 40.0%
CATCTTTGATCAGATCTTCC+CGG - Chr1:1930426-1930445 None:intergenic 40.0%
CATGCATAGAGAATCCTGAA+GGG + Chr1:1929608-1929627 MsG0180000135.01.T01:intron 40.0%
CCGAACAAACAGAGGTAAAA+CGG - Chr1:1927731-1927750 None:intergenic 40.0%
CGATCCATTATGGATGTTCT+AGG + Chr1:1929275-1929294 MsG0180000135.01.T01:intron 40.0%
CGGTTGGCAAAAACTAAGTT+TGG - Chr1:1928732-1928751 None:intergenic 40.0%
CTGTAAGATTCAGGTCCATT+TGG + Chr1:1928009-1928028 MsG0180000135.01.T01:intron 40.0%
CTTACTTTCATTCTCTGTGG+AGG + Chr1:1929336-1929355 MsG0180000135.01.T01:intron 40.0%
GAAACAGCATAAATAGGGGA+GGG - Chr1:1929930-1929949 None:intergenic 40.0%
GAAATGGGACTGTAAGATTC+AGG + Chr1:1928000-1928019 MsG0180000135.01.T01:intron 40.0%
GAAGATGGAAGCAATCTAGA+GGG + Chr1:1928291-1928310 MsG0180000135.01.T01:intron 40.0%
GCATTCAGATCTCATGTAAC+GGG - Chr1:1927613-1927632 None:intergenic 40.0%
TAATAGAAAGTTGGACAGGG+TGG + Chr1:1930070-1930089 MsG0180000135.01.T01:intron 40.0%
TAATATGGAAGTAGGGAGAC+TGG + Chr1:1929030-1929049 MsG0180000135.01.T01:intron 40.0%
TACCCCTAGAACATCCATAA+TGG - Chr1:1929282-1929301 None:intergenic 40.0%
TACGCTGTTGTGTTGTCTTA+TGG + Chr1:1929702-1929721 MsG0180000135.01.T01:intron 40.0%
TCCTGATCCAAAATGTGGAA+AGG - Chr1:1930532-1930551 None:intergenic 40.0%
TGCACCCTAATGAATGTCAA+CGG + Chr1:1929232-1929251 MsG0180000135.01.T01:intron 40.0%
TGTAGAATAACTGGCTGAAC+AGG + Chr1:1929772-1929791 MsG0180000135.01.T01:intron 40.0%
TGTTGTCTTATGGTGTGAAG+TGG + Chr1:1929712-1929731 MsG0180000135.01.T01:intron 40.0%
TTAGAGACGGAGTTAGACTA+CGG + Chr1:1929181-1929200 MsG0180000135.01.T01:intron 40.0%
TTGTCTTCTTGACAACACGA+CGG - Chr1:1928868-1928887 None:intergenic 40.0%
! ACGTCTCTTTCAAGGTTTTG+AGG + Chr1:1929431-1929450 MsG0180000135.01.T01:intron 40.0%
! AGCTGGATTAGATGAATCAG+GGG + Chr1:1930276-1930295 MsG0180000135.01.T01:CDS 40.0%
! CCGTTTTACCTCTGTTTGTT+CGG + Chr1:1927728-1927747 MsG0180000135.01.T01:intron 40.0%
! CGGTAAGTTGACAAAATCAC+GGG + Chr1:1928682-1928701 MsG0180000135.01.T01:intron 40.0%
! GCGGTAAGTTGACAAAATCA+CGG + Chr1:1928681-1928700 MsG0180000135.01.T01:intron 40.0%
! GTAGCTGGATTAGATGAATC+AGG + Chr1:1930274-1930293 MsG0180000135.01.T01:CDS 40.0%
! TAACCTAACCTGAGCCTTAT+CGG - Chr1:1927697-1927716 None:intergenic 40.0%
! TCATAGTATTTTGCCTACCC+AGG - Chr1:1928489-1928508 None:intergenic 40.0%
! TCATGTAACGGGAAAGAACA+CGG - Chr1:1927602-1927621 None:intergenic 40.0%
! TTGTTGCTTGTGTGAAATGG+CGG + Chr1:1928662-1928681 MsG0180000135.01.T01:intron 40.0%
!! GACTTGTTGCTTGTGTGAAA+TGG + Chr1:1928659-1928678 MsG0180000135.01.T01:intron 40.0%
!! GATTTTGGCAAAATCACGGT+TGG - Chr1:1928748-1928767 None:intergenic 40.0%
!! GTTTCAAGTTGAGTGTGTCA+TGG + Chr1:1930774-1930793 MsG0180000135.01.T01:three_prime_UTR 40.0%
!!! CTCTTTCAAGGTTTTGAGGA+GGG + Chr1:1929435-1929454 MsG0180000135.01.T01:intron 40.0%
!!! TACTTTTGAGATTGTGAGGG+AGG + Chr1:1930573-1930592 MsG0180000135.01.T01:CDS 40.0%
!!! TCTCTTTCAAGGTTTTGAGG+AGG + Chr1:1929434-1929453 MsG0180000135.01.T01:intron 40.0%
AAACTGTCGTGAGAGGCTAT+TGG + Chr1:1929540-1929559 MsG0180000135.01.T01:intron 45.0%
AACAGACACTAAGGACCCTT+TGG - Chr1:1928204-1928223 None:intergenic 45.0%
AACAGCATAAATAGGGGAGG+GGG - Chr1:1929928-1929947 None:intergenic 45.0%
AACCACAGCAATGGTGCATA+CGG - Chr1:1930497-1930516 None:intergenic 45.0%
AAGCAAGGTTCAGCAGCAAT+AGG + Chr1:1927444-1927463 MsG0180000135.01.T01:CDS 45.0%
ACACTAAGGACCCTTTGGAT+TGG - Chr1:1928199-1928218 None:intergenic 45.0%
ACCTTGCTTAACTGCTTCCA+TGG - Chr1:1927433-1927452 None:intergenic 45.0%
ACGATACCGACGTAACAACA+TGG + Chr1:1927373-1927392 MsG0180000135.01.T01:CDS 45.0%
ACTAGAAGTCCAACGCCATA+AGG - Chr1:1930256-1930275 None:intergenic 45.0%
AGGGGTAGACCTCATAGTAA+TGG + Chr1:1929295-1929314 MsG0180000135.01.T01:intron 45.0%
AGTGTCTCTGTTAGTGACTG+TGG + Chr1:1928594-1928613 MsG0180000135.01.T01:intron 45.0%
CTCTATTACAACTGCCCAAG+CGG + Chr1:1930304-1930323 MsG0180000135.01.T01:CDS 45.0%
CTTAACTGAGTGGCTCACTT+TGG + Chr1:1927929-1927948 MsG0180000135.01.T01:intron 45.0%
GCATGCATAGAGAATCCTGA+AGG + Chr1:1929607-1929626 MsG0180000135.01.T01:intron 45.0%
GGGGTAGACCTCATAGTAAT+GGG + Chr1:1929296-1929315 MsG0180000135.01.T01:intron 45.0%
GTACAGAAGTTGTCCAACCT+GGG + Chr1:1928469-1928488 MsG0180000135.01.T01:intron 45.0%
TGCATAGAGAATCCTGAAGG+GGG + Chr1:1929610-1929629 MsG0180000135.01.T01:intron 45.0%
! AGTATTTTGCCTACCCAGGT+TGG - Chr1:1928485-1928504 None:intergenic 45.0%
! CATCTGGAACGTCTCTTTCA+AGG + Chr1:1929423-1929442 MsG0180000135.01.T01:intron 45.0%
! GCCTTTCCACATTTTGGATC+AGG + Chr1:1930528-1930547 MsG0180000135.01.T01:CDS 45.0%
! TGGTGAGCCTTTCCACATTT+TGG + Chr1:1930522-1930541 MsG0180000135.01.T01:CDS 45.0%
!! CAAAAGTATTAGCCCCCTTC+AGG - Chr1:1929625-1929644 None:intergenic 45.0%
!! CCTCTCCTTTGGTCTTTTTG+CGG + Chr1:1928441-1928460 MsG0180000135.01.T01:intron 45.0%
!! CTCTCCTTTGGTCTTTTTGC+GGG + Chr1:1928442-1928461 MsG0180000135.01.T01:intron 45.0%
!! TAGTGGTCTATCGACTCGAT+AGG + Chr1:1929488-1929507 MsG0180000135.01.T01:intron 45.0%
!! TCTCCTTTGGTCTTTTTGCG+GGG + Chr1:1928443-1928462 MsG0180000135.01.T01:intron 45.0%
!!! GAACCACGTGAGTTTTGGAT+CGG - Chr1:1927473-1927492 None:intergenic 45.0%
AAAGTTGGACAGGGTGGGTA+TGG + Chr1:1930076-1930095 MsG0180000135.01.T01:intron 50.0%
AAGTTGGACAGGGTGGGTAT+GGG + Chr1:1930077-1930096 MsG0180000135.01.T01:intron 50.0%
ACCAACTCCAACCACAGCAA+TGG - Chr1:1930506-1930525 None:intergenic 50.0%
ACCATTGCTGTGGTTGGAGT+TGG + Chr1:1930502-1930521 MsG0180000135.01.T01:CDS 50.0%
ACGTTCACAGTGATCAGCCA+TGG - Chr1:1930856-1930875 None:intergenic 50.0%
AGAAGTTGTCCAACCTGGGT+AGG + Chr1:1928473-1928492 MsG0180000135.01.T01:intron 50.0%
AGGTTTGCACTCAGCGATCA+TGG + Chr1:1930224-1930243 MsG0180000135.01.T01:intron 50.0%
CCGCAAAAAGACCAAAGGAG+AGG - Chr1:1928444-1928463 None:intergenic 50.0%
CCTTGCAAGGTGAAAAGCTC+AGG + Chr1:1930467-1930486 MsG0180000135.01.T01:CDS 50.0%
CGACGTAACAACATGGTCAC+CGG + Chr1:1927380-1927399 MsG0180000135.01.T01:CDS 50.0%
CGCTTGGGCAGTTGTAATAG+AGG - Chr1:1930306-1930325 None:intergenic 50.0%
CGGTGACCATGTTGTTACGT+CGG - Chr1:1927382-1927401 None:intergenic 50.0%
CTGAACGACGAGTCTACCAA+CGG - Chr1:1927670-1927689 None:intergenic 50.0%
GCCATGGAAGCAGTTAAGCA+AGG + Chr1:1927429-1927448 MsG0180000135.01.T01:CDS 50.0%
GCTTCTGGTGCAGATCAAAG+TGG + Chr1:1930655-1930674 MsG0180000135.01.T01:CDS 50.0%
GGTACAGAAGTTGTCCAACC+TGG + Chr1:1928468-1928487 MsG0180000135.01.T01:intron 50.0%
GTATGCACCATTGCTGTGGT+TGG + Chr1:1930496-1930515 MsG0180000135.01.T01:CDS 50.0%
GTCTCTGTTAGTGACTGTGG+TGG + Chr1:1928597-1928616 MsG0180000135.01.T01:intron 50.0%
TATGAATCTCCGCTTCCCGT+TGG + Chr1:1927651-1927670 MsG0180000135.01.T01:CDS 50.0%
TCTCCATTGGAGAACCACCT+TGG - Chr1:1930696-1930715 None:intergenic 50.0%
TCTCCGATCCAAAACTCACG+TGG + Chr1:1927467-1927486 MsG0180000135.01.T01:CDS 50.0%
TCTTCTTGACAACACGACGG+AGG - Chr1:1928865-1928884 None:intergenic 50.0%
TGAACGACGAGTCTACCAAC+GGG - Chr1:1927669-1927688 None:intergenic 50.0%
TGACCAAGGTGGTTCTCCAA+TGG + Chr1:1930690-1930709 MsG0180000135.01.T01:CDS 50.0%
TTTGATCAGATCTTCCCGGG+AGG - Chr1:1930422-1930441 None:intergenic 50.0%
! CCTGAGCTTTTCACCTTGCA+AGG - Chr1:1930470-1930489 None:intergenic 50.0%
!! AGATCAAAGTGGTGCTGGTG+GGG + Chr1:1930666-1930685 MsG0180000135.01.T01:CDS 50.0%
!! CAGATCAAAGTGGTGCTGGT+GGG + Chr1:1930665-1930684 MsG0180000135.01.T01:CDS 50.0%
!! CGATCATGGAAGCGTCCTTA+TGG + Chr1:1930238-1930257 MsG0180000135.01.T01:CDS 50.0%
!! CTCCTTTGGTCTTTTTGCGG+GGG + Chr1:1928444-1928463 MsG0180000135.01.T01:intron 50.0%
!!! GGTTTTGAGGAGGGAAACAG+TGG + Chr1:1929444-1929463 MsG0180000135.01.T01:intron 50.0%
ACAACTTCACAGCCTCCTCC+CGG + Chr1:1930404-1930423 MsG0180000135.01.T01:CDS 55.0%
ACGAGTCTACCAACGGGAAG+CGG - Chr1:1927663-1927682 None:intergenic 55.0%
ACGGGAAAGAACACGGCCAT+CGG - Chr1:1927595-1927614 None:intergenic 55.0%
AGTTGGACAGGGTGGGTATG+GGG + Chr1:1930078-1930097 MsG0180000135.01.T01:intron 55.0%
CGTAACAACATGGTCACCGG+CGG + Chr1:1927383-1927402 MsG0180000135.01.T01:CDS 55.0%
CTCCCCCGCAAAAAGACCAA+AGG - Chr1:1928449-1928468 None:intergenic 55.0%
CTCCGTATGCACCATTGCTG+TGG + Chr1:1930492-1930511 MsG0180000135.01.T01:CDS 55.0%
CTTCCAGGTGGAATACGCCA+TGG + Chr1:1927413-1927432 MsG0180000135.01.T01:CDS 55.0%
CTTCCATGGCGTATTCCACC+TGG - Chr1:1927419-1927438 None:intergenic 55.0%
GAAGTAGGGAGACTGGTGTG+CGG + Chr1:1929037-1929056 MsG0180000135.01.T01:intron 55.0%
GCAACTAGGGAGTCCTTGCA+AGG + Chr1:1930454-1930473 MsG0180000135.01.T01:CDS 55.0%
GGTGCAGATCAAAGTGGTGC+TGG + Chr1:1930661-1930680 MsG0180000135.01.T01:CDS 55.0%
GTAACAACATGGTCACCGGC+GGG + Chr1:1927384-1927403 MsG0180000135.01.T01:CDS 55.0%
TCGCCGATAAGGCTCAGGTT+AGG + Chr1:1927691-1927710 MsG0180000135.01.T01:intron 55.0%
TGCACCAGAAGCCTGATCTG+TGG - Chr1:1930647-1930666 None:intergenic 55.0%
! CGCGAGAACCACGTGAGTTT+TGG - Chr1:1927478-1927497 None:intergenic 55.0%
! GCAGATCAAAGTGGTGCTGG+TGG + Chr1:1930664-1930683 MsG0180000135.01.T01:CDS 55.0%
! GGCGTTGGACTTCTAGTAGC+TGG + Chr1:1930259-1930278 MsG0180000135.01.T01:CDS 55.0%
!! CTTTGGTCTTTTTGCGGGGG+AGG + Chr1:1928447-1928466 MsG0180000135.01.T01:intron 55.0%
!! TGGAAGCGTCCTTATGGCGT+TGG + Chr1:1930244-1930263 MsG0180000135.01.T01:CDS 55.0%
ACCTGGAAGAGTCTTCCCGC+CGG - Chr1:1927402-1927421 None:intergenic 60.0%
AGCTGCACCTGCTGAACCTG+AGG + Chr1:1930600-1930619 MsG0180000135.01.T01:CDS 60.0%
CAACTTCACAGCCTCCTCCC+GGG + Chr1:1930405-1930424 MsG0180000135.01.T01:CDS 60.0%
CATATCGGCGTTGCCATCGC+CGG + Chr1:1927561-1927580 MsG0180000135.01.T01:CDS 60.0%
CGTCGTTCAGCTCGCCGATA+AGG + Chr1:1927680-1927699 MsG0180000135.01.T01:CDS 60.0%
GATCAGATCTTCCCGGGAGG+AGG - Chr1:1930419-1930438 None:intergenic 60.0%
GCAGGATGCTGCCACAGATC+AGG + Chr1:1930633-1930652 MsG0180000135.01.T01:CDS 60.0%
GCTGCCACAGATCAGGCTTC+TGG + Chr1:1930640-1930659 MsG0180000135.01.T01:CDS 60.0%
GGAAAGAACACGGCCATCGG+CGG - Chr1:1927592-1927611 None:intergenic 60.0%
GTTGGACAGGGTGGGTATGG+GGG + Chr1:1930079-1930098 MsG0180000135.01.T01:intron 60.0%
TCAGCTCGCCGATAAGGCTC+AGG + Chr1:1927686-1927705 MsG0180000135.01.T01:CDS 60.0%
TTGGACAGGGTGGGTATGGG+GGG + Chr1:1930080-1930099 MsG0180000135.01.T01:intron 60.0%
ACCGGCGGGAAGACTCTTCC+AGG + Chr1:1927398-1927417 MsG0180000135.01.T01:CDS 65.0%
ACCTGAGGCTGCAGCTGAGC+AGG + Chr1:1930615-1930634 MsG0180000135.01.T01:CDS 65.0%
GCTGCAGCCTCAGGTTCAGC+AGG - Chr1:1930610-1930629 None:intergenic 65.0%
GGCGGGAAGACTCTTCCAGG+TGG + Chr1:1927401-1927420 MsG0180000135.01.T01:CDS 65.0%
TCCTGCTCAGCTGCAGCCTC+AGG - Chr1:1930619-1930638 None:intergenic 65.0%
TGGACAGGGTGGGTATGGGG+GGG + Chr1:1930081-1930100 MsG0180000135.01.T01:intron 65.0%
ACGGCCATCGGCGGTGAGAC+CGG - Chr1:1927583-1927602 None:intergenic 70.0%
ATCGCCGGTCTCACCGCCGA+TGG + Chr1:1927576-1927595 MsG0180000135.01.T01:CDS 70.0%
ATCGGCGGTGAGACCGGCGA+TGG - Chr1:1927577-1927596 None:intergenic 70.0%
GCTGGTGGGGCTGACCAAGG+TGG + Chr1:1930679-1930698 MsG0180000135.01.T01:CDS 70.0%
!! GGTGCTGGTGGGGCTGACCA+AGG + Chr1:1930676-1930695 MsG0180000135.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 1927292 1931004 1927292 ID=MsG0180000135.01;Name=MsG0180000135.01
Chr1 mRNA 1927292 1931004 1927292 ID=MsG0180000135.01.T01;Parent=MsG0180000135.01;Name=MsG0180000135.01.T01;_AED=0.48;_eAED=0.48;_QI=65|1|1|1|1|1|2|284|281
Chr1 exon 1930226 1931004 1930226 ID=MsG0180000135.01.T01:exon:6954;Parent=MsG0180000135.01.T01
Chr1 exon 1927292 1927707 1927292 ID=MsG0180000135.01.T01:exon:6953;Parent=MsG0180000135.01.T01
Chr1 five_prime_UTR 1927292 1927356 1927292 ID=MsG0180000135.01.T01:five_prime_utr;Parent=MsG0180000135.01.T01
Chr1 CDS 1927357 1927707 1927357 ID=MsG0180000135.01.T01:cds;Parent=MsG0180000135.01.T01
Chr1 CDS 1930226 1930720 1930226 ID=MsG0180000135.01.T01:cds;Parent=MsG0180000135.01.T01
Chr1 three_prime_UTR 1930721 1931004 1930721 ID=MsG0180000135.01.T01:three_prime_utr;Parent=MsG0180000135.01.T01
Gene Sequence

>MsG0180000135.01.T01

ATGTTTAGAAATCAATACGATACCGACGTAACAACATGGTCACCGGCGGGAAGACTCTTCCAGGTGGAATACGCCATGGAAGCAGTTAAGCAAGGTTCAGCAGCAATAGGTCTCCGATCCAAAACTCACGTGGTTCTCGCGTGTGTTAACAAAGCCAATTCTGAACTATCTTCTCATCAGAAGAAGATCTTCAAGGTTGATGATCATATCGGCGTTGCCATCGCCGGTCTCACCGCCGATGGCCGTGTTCTTTCCCGTTACATGAGATCTGAATGCATTAACTATAATTACACTTATGAATCTCCGCTTCCCGTTGGTAGACTCGTCGTTCAGCTCGCCGATAAGGCTCAGGTTTGCACTCAGCGATCATGGAAGCGTCCTTATGGCGTTGGACTTCTAGTAGCTGGATTAGATGAATCAGGGGCTCACCTCTATTACAACTGCCCAAGCGGAAACTATTTTGAATATCAGGCATTTGCAATCGGTTCACGCTCACAAGCTGCAAAGACATATTTGGAACGCAAATTTAACAACTTCACAGCCTCCTCCCGGGAAGATCTGATCAAAGATGCACTCATTGCAACTAGGGAGTCCTTGCAAGGTGAAAAGCTCAGGAGCTCCGTATGCACCATTGCTGTGGTTGGAGTTGGTGAGCCTTTCCACATTTTGGATCAGGAAACTGTTCAACAGTTAATTGATACTTTTGAGATTGTGAGGGAGGAAGAAGCTGCACCTGCTGAACCTGAGGCTGCAGCTGAGCAGGATGCTGCCACAGATCAGGCTTCTGGTGCAGATCAAAGTGGTGCTGGTGGGGCTGACCAAGGTGGTTCTCCAATGGAGATTTGA
Protein sequence

>MsG0180000135.01.T01

MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYNYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFNNFTASSREDLIKDALIATRESLQGEKLRSSVCTIAVVGVGEPFHILDQETVQQLIDTFEIVREEEAAPAEPEAAAEQDAATDQASGADQSGAGGADQGGSPMEI*