AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680034649.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034649.01.T01 MTR_6g070900 93.567 171 11 0 203 373 44 214 4.72e-103 303
MsG0680034649.01.T01 MTR_6g070900 88.889 144 16 0 55 198 37 180 2.78e-90 270
MsG0680034649.01.T01 MTR_6g071400 93.567 171 11 0 203 373 44 214 4.72e-103 303
MsG0680034649.01.T01 MTR_6g071400 88.889 144 16 0 55 198 37 180 2.78e-90 270
MsG0680034649.01.T01 MTR_6g071410 88.571 175 16 1 203 373 44 218 6.22e-99 293
MsG0680034649.01.T01 MTR_6g071410 95.139 144 7 0 55 198 37 180 1.21e-95 284
MsG0680034649.01.T01 MTR_6g070890 88.571 175 16 1 203 373 44 218 6.22e-99 293
MsG0680034649.01.T01 MTR_6g070890 95.139 144 7 0 55 198 37 180 1.21e-95 284
MsG0680034649.01.T01 MTR_6g471090 82.639 144 24 1 55 198 36 178 5.68e-82 249
MsG0680034649.01.T01 MTR_6g471090 80.357 168 32 1 203 370 43 209 7.60e-81 246
MsG0680034649.01.T01 MTR_6g471080 82.639 144 24 1 55 198 33 175 6.94e-76 234
MsG0680034649.01.T01 MTR_6g471080 77.326 172 38 1 202 373 39 209 3.13e-75 232
MsG0680034649.01.T01 MTR_6g071710 86.806 144 19 0 230 373 19 162 1.12e-74 229
MsG0680034649.01.T01 MTR_6g071710 89.091 110 12 0 89 198 19 128 5.02e-66 206
MsG0680034649.01.T01 MTR_2g048270 62.581 155 50 4 208 362 2 148 9.99e-60 191
MsG0680034649.01.T01 MTR_2g048270 61.644 146 51 3 67 212 2 142 3.82e-56 182
MsG0680034649.01.T01 MTR_1g057270 41.615 161 83 8 200 358 87 238 1.06e-22 96.3
MsG0680034649.01.T01 MTR_1g057270 40.764 157 84 6 52 206 80 229 4.40e-22 94.4
MsG0680034649.01.T01 MTR_4g119428 40.127 157 85 7 203 358 88 236 5.01e-22 94.4
MsG0680034649.01.T01 MTR_4g119428 42.017 119 67 2 52 169 78 195 4.08e-21 91.7
MsG0680034649.01.T01 MTR_6g453010 35.669 157 74 6 48 199 34 168 1.15e-14 72.0
MsG0680034649.01.T01 MTR_6g453010 37.857 140 65 3 203 340 49 168 1.26e-13 68.9
MsG0680034649.01.T01 MTR_3g063310 35.714 126 69 4 52 171 92 211 1.86e-13 70.1
MsG0680034649.01.T01 MTR_3g063310 38.053 113 58 4 206 312 105 211 1.10e-11 64.7
MsG0680034649.01.T01 MTR_7g106010 35.897 156 88 8 54 205 64 211 3.17e-13 68.9
MsG0680034649.01.T01 MTR_7g106010 35.526 152 85 8 204 351 73 215 1.40e-11 63.9
MsG0680034649.01.T01 MTR_7g105870 37.415 147 86 5 52 197 66 207 8.70e-13 67.8
MsG0680034649.01.T01 MTR_7g105870 39.130 138 78 6 202 338 75 207 2.98e-11 63.2
MsG0680034649.01.T01 MTR_5g076170 30.573 157 78 4 52 177 103 259 5.22e-12 65.9
MsG0680034649.01.T01 MTR_7g106030 32.911 158 95 7 54 207 68 218 6.20e-12 65.1
MsG0680034649.01.T01 MTR_7g106000 32.911 158 96 7 54 207 67 218 7.02e-12 65.1
MsG0680034649.01.T01 MTR_1g019920 43.333 60 33 1 58 117 24 82 4.45e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034649.01.T01 AT2G35980 42.177 147 80 5 52 197 64 206 9.35e-23 95.9
MsG0680034649.01.T01 AT2G35980 35.669 157 92 5 202 355 73 223 1.52e-17 81.3
MsG0680034649.01.T01 AT5G06320 40.127 157 82 7 52 204 71 219 6.06e-19 85.5
MsG0680034649.01.T01 AT5G06320 38.415 164 76 7 203 358 81 227 1.73e-15 75.5
MsG0680034649.01.T01 AT2G35460 36.242 149 89 6 56 203 81 224 5.19e-18 82.8
MsG0680034649.01.T01 AT2G35460 33.750 160 88 7 203 358 89 234 1.47e-14 73.2
MsG0680034649.01.T01 AT3G11650 32.886 149 96 4 52 200 78 222 4.01e-16 77.4
MsG0680034649.01.T01 AT3G11650 30.769 156 100 3 203 358 88 235 2.47e-15 75.1
MsG0680034649.01.T01 AT1G32270 30.986 142 92 4 203 343 13 149 2.46e-13 70.9
MsG0680034649.01.T01 AT1G32270 28.662 157 101 4 52 205 3 151 1.83e-12 68.2
MsG0680034649.01.T01 AT1G32270 30.986 142 92 4 203 343 13 149 2.80e-13 71.2
MsG0680034649.01.T01 AT1G32270 28.662 157 101 4 52 205 3 151 2.15e-12 68.6

Find 54 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGACCGATTGAGTTTAA+AGG 0.190427 6:+92126693 MsG0680034649.01.T01:CDS
TGGTACAAAGACAATTATTT+TGG 0.221476 6:+92129731 MsG0680034649.01.T01:CDS
CTTGGACCGATTGAGTTTAA+AGG 0.236481 6:+92129803 MsG0680034649.01.T01:CDS
CACAAGAATACAACCTTTCT+TGG 0.276127 6:+92126675 MsG0680034649.01.T01:CDS
GACTTTGAAATTGTAGTATA+AGG 0.277662 6:-92129642 None:intergenic
AATCGACGACACTGCACAAC+TGG 0.351277 6:-92129974 None:intergenic
AGAACCACTGCTACATCTTC+TGG 0.358737 6:-92130059 None:intergenic
TCTTGGGATTCACGATGATT+TGG 0.366600 6:+92129883 MsG0680034649.01.T01:CDS
TCTTCGGATTCACAATGATT+TGG 0.371052 6:+92126773 MsG0680034649.01.T01:CDS
GTTCGAATTAGAGCTAAGTT+TGG 0.373531 6:+92126810 MsG0680034649.01.T01:CDS
GTTCGAATTAGAGCTAAGTT+TGG 0.373531 6:+92129920 MsG0680034649.01.T01:CDS
TAGACTATGATGTTATTGTT+GGG 0.398962 6:-92126573 None:intergenic
TGATTATGTGAAGAAGAATA+AGG 0.400819 6:+92123827 MsG0680034649.01.T01:CDS
AAACGACGACACTGCACAAC+TGG 0.406663 6:-92126864 None:intergenic
AATCAAAGAGCAAGGTTTGT+TGG 0.408161 6:+92123765 MsG0680034649.01.T01:CDS
ATAGACTATGATGTTATTGT+TGG 0.414219 6:-92126574 None:intergenic
GTATTTCCTTTAAACTCAAT+CGG 0.428273 6:-92129809 None:intergenic
TCGTCGTTTAAGTGTTCCTT+TGG 0.428768 6:+92126878 MsG0680034649.01.T01:CDS
TAGACTATGATGTTGTTGTT+GGG 0.431024 6:-92129683 None:intergenic
CCTTTGGTTTCTTCTTCCAA+TGG 0.437143 6:+92126894 MsG0680034649.01.T01:CDS
GTATTTCCTTTAAACTCAAT+CGG 0.442847 6:-92126699 None:intergenic
CCTTTGATTTCTTCTTCCAA+TGG 0.444529 6:+92130004 MsG0680034649.01.T01:CDS
ATAGACTATGATGTTGTTGT+TGG 0.459337 6:-92129684 None:intergenic
AAGCAATCGCTGTGATTCTT+CGG 0.460413 6:-92129709 None:intergenic
AAGCAATTACCGTGGTTCTT+CGG 0.464671 6:-92126599 None:intergenic
AAACTCAATCGGTCCAAGAA+AGG 0.468053 6:-92126688 None:intergenic
ACAGATCGTGATGCAGATGC+TGG 0.479605 6:+92130088 MsG0680034649.01.T01:CDS
TCAAAGAGTGAGAGAGATGA+AGG 0.490181 6:+92123869 MsG0680034649.01.T01:CDS
TTCTTCTGTCCTTGATCGAA+CGG 0.493621 6:-92129770 None:intergenic
GTTATTGTTGGGGTTTCGTA+CGG 0.499862 6:-92126562 None:intergenic
GAAGAATCACAGCGATTGCT+TGG 0.509067 6:+92129711 MsG0680034649.01.T01:CDS
TGAGAGTAGCATCGGTTATG+TGG 0.511206 6:-92126482 None:intergenic
AGTTTGACACCGTTCGATCA+AGG 0.513200 6:+92126651 MsG0680034649.01.T01:CDS
GGAAATACTAAGATCAAACT+TGG 0.516600 6:+92129824 MsG0680034649.01.T01:CDS
AGCTTGACACCGTTCGATCA+AGG 0.518464 6:+92129761 MsG0680034649.01.T01:CDS
GACTTTGAAATTGTAGTACA+AGG 0.523518 6:-92126532 None:intergenic
GGAAATACTAAAATCAAACT+TGG 0.525352 6:+92126714 MsG0680034649.01.T01:CDS
AGACTATGATGTTATTGTTG+GGG 0.535200 6:-92126572 None:intergenic
CGACGACACTGCACAACTGG+TGG 0.551685 6:-92126861 None:intergenic
GAAGAACCACGGTAATTGCT+TGG 0.552131 6:+92126601 MsG0680034649.01.T01:CDS
AGACTATGATGTTGTTGTTG+GGG 0.552465 6:-92129682 None:intergenic
AGAGCCAGAAGATGTAGCAG+TGG 0.561847 6:+92130055 MsG0680034649.01.T01:CDS
ATAAGGTGTTGTTGTTTGTG+AGG 0.569259 6:-92129625 None:intergenic
TTCTTGTGTCCTTGATCGAA+CGG 0.569721 6:-92126660 None:intergenic
TGATGTCGATGAATTACCAT+TGG 0.572305 6:-92130020 None:intergenic
AGAGCAAGGTTTGTTGGATG+CGG 0.574396 6:+92123771 MsG0680034649.01.T01:CDS
GTTGTTTGTGAGGTTGAACT+CGG 0.583277 6:-92129615 None:intergenic
AGAAAGACAATCAAAGAGCA+AGG 0.586774 6:+92123757 MsG0680034649.01.T01:CDS
GAACTCGGTGAGAGTAGCAT+CGG 0.614918 6:-92126490 None:intergenic
GTTGTTTGTGATGTTGAACT+CGG 0.616494 6:-92126505 None:intergenic
TTTGTACCAAGCAATTACCG+TGG 0.698841 6:-92126607 None:intergenic
CCATTGGAAGAAGAAATCAA+AGG 0.712837 6:-92130004 None:intergenic
AGTCTATTACCGAAGAACCA+CGG 0.736737 6:+92126590 MsG0680034649.01.T01:CDS
CCATTGGAAGAAGAAACCAA+AGG 0.754982 6:-92126894 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTCATCTTATAAATAT+TGG + Chr6:92128808-92128827 MsG0680034649.01.T01:intron 10.0%
!!! AAATGTTATTTAGTTATATT+TGG + Chr6:92127521-92127540 MsG0680034649.01.T01:intron 10.0%
!!! ACTAATTTAATTTTTATACA+TGG + Chr6:92128740-92128759 MsG0680034649.01.T01:intron 10.0%
!!! ATAATTTTCCAAATATTTTA+AGG - Chr6:92129005-92129024 None:intergenic 10.0%
!!! TAATTTTCCAAATATTTTAA+GGG - Chr6:92129004-92129023 None:intergenic 10.0%
!!! TAGTTTTCTTTAAAAATTTA+GGG - Chr6:92127880-92127899 None:intergenic 10.0%
!!! TTAATTATAAATTTTGTCTA+GGG - Chr6:92125748-92125767 None:intergenic 10.0%
!!! TTAGTTTTCTTTAAAAATTT+AGG - Chr6:92127881-92127900 None:intergenic 10.0%
!! AAACAATATAAGTAATACAA+TGG - Chr6:92128081-92128100 None:intergenic 15.0%
!! AAAGGAAATAAATGATAAAA+AGG - Chr6:92125980-92125999 None:intergenic 15.0%
!! AATATAAAATATCATACTTG+AGG - Chr6:92129229-92129248 None:intergenic 15.0%
!! ATATTTATTGTGTACTTTAA+AGG + Chr6:92128680-92128699 MsG0680034649.01.T01:intron 15.0%
!! ATGTGTTTGTAATAATAAAA+AGG + Chr6:92128464-92128483 MsG0680034649.01.T01:intron 15.0%
!! ATTATTATGTTAGTTGAAAT+CGG - Chr6:92125431-92125450 None:intergenic 15.0%
!! ATTTCATATTTCATTTCTAT+AGG + Chr6:92129138-92129157 MsG0680034649.01.T01:intron 15.0%
!! TAAATTTGAATAACATAACA+GGG - Chr6:92128721-92128740 None:intergenic 15.0%
!! TGTGTTTGTAATAATAAAAA+GGG + Chr6:92128465-92128484 MsG0680034649.01.T01:intron 15.0%
!! TTGAATTAAAAAAATGAGAA+AGG - Chr6:92123954-92123973 None:intergenic 15.0%
!!! GATTTGATTTTTTTTTGTTA+CGG - Chr6:92125725-92125744 None:intergenic 15.0%
!!! GTTAATTATAAATTTTGTCT+AGG - Chr6:92125749-92125768 None:intergenic 15.0%
!!! TAATTATAAATTTTGTCTAG+GGG - Chr6:92125747-92125766 None:intergenic 15.0%
!!! TACATTTAATTTCTTATCTT+GGG - Chr6:92128567-92128586 None:intergenic 15.0%
!!! TATTTTTTTTTTTAGGCAAA+AGG + Chr6:92125820-92125839 MsG0680034649.01.T01:intron 15.0%
!!! TCAAAAGTACATATAATATA+CGG + Chr6:92127627-92127646 MsG0680034649.01.T01:intron 15.0%
!!! TGTTGAATTAATTTCAATTT+TGG + Chr6:92127665-92127684 MsG0680034649.01.T01:intron 15.0%
!!! TTACATTTAATTTCTTATCT+TGG - Chr6:92128568-92128587 None:intergenic 15.0%
!!! TTTTTAGAGTTTAATTTTCA+TGG - Chr6:92127407-92127426 None:intergenic 15.0%
!! AAAATTTCTTCGCAATTTAA+AGG - Chr6:92125998-92126017 None:intergenic 20.0%
!! AACATTTCCCTTAAAATATT+TGG + Chr6:92128994-92129013 MsG0680034649.01.T01:intron 20.0%
!! AATATGAAATATCAAACTTG+AGG - Chr6:92129128-92129147 None:intergenic 20.0%
!! AATATGTGTAATCAATGTAT+TGG - Chr6:92128919-92128938 None:intergenic 20.0%
!! AATCATGACAAAGAATATAA+CGG - Chr6:92126415-92126434 None:intergenic 20.0%
!! ACATTCTCTTACATATTTAA+TGG - Chr6:92128448-92128467 None:intergenic 20.0%
!! ATAAATAGATACAAAGATTG+AGG + Chr6:92125862-92125881 MsG0680034649.01.T01:intron 20.0%
!! ATTACTCTATTAAAAGAGTT+AGG + Chr6:92129251-92129270 MsG0680034649.01.T01:intron 20.0%
!! GATAAAGGTAGAATTATAAA+AGG + Chr6:92124973-92124992 MsG0680034649.01.T01:intron 20.0%
!! GTAAATTTGAATAACATAAC+AGG - Chr6:92128722-92128741 None:intergenic 20.0%
!! TAAATAGATACAAAGATTGA+GGG + Chr6:92125863-92125882 MsG0680034649.01.T01:intron 20.0%
!! TAATTCAAAATATACACATG+TGG + Chr6:92124005-92124024 MsG0680034649.01.T01:intron 20.0%
!! TAATTCAATTGATAAACATG+TGG + Chr6:92123966-92123985 MsG0680034649.01.T01:intron 20.0%
!! TGAGGATATATTAACTTATA+AGG - Chr6:92127234-92127253 None:intergenic 20.0%
!! TTGAGGATATTACAAATTAA+TGG - Chr6:92129169-92129188 None:intergenic 20.0%
!! TTGAGGATATTACAAATTAT+TGG - Chr6:92129212-92129231 None:intergenic 20.0%
!! TTTGCATAGTAAGTATTTAT+AGG + Chr6:92125044-92125063 MsG0680034649.01.T01:intron 20.0%
!!! AAAATTGACGTTTTGTAAAA+GGG + Chr6:92124053-92124072 MsG0680034649.01.T01:intron 20.0%
!!! AAATGGATAACTCAATTTTT+CGG + Chr6:92124769-92124788 MsG0680034649.01.T01:intron 20.0%
!!! AATACATTGTCTTTTGATTT+TGG - Chr6:92127437-92127456 None:intergenic 20.0%
!!! AATTTTTTGAGTTTGCTATT+AGG + Chr6:92124928-92124947 MsG0680034649.01.T01:intron 20.0%
!!! ACATTTAATTTCTTATCTTG+GGG - Chr6:92128566-92128585 None:intergenic 20.0%
!!! ACTTTTGCCATTTTTTTAAT+AGG + Chr6:92124091-92124110 MsG0680034649.01.T01:intron 20.0%
!!! AGATTTGAATATTTTTGTGA+TGG - Chr6:92126336-92126355 None:intergenic 20.0%
!!! AGTATATAGTAAGATTTGTT+AGG - Chr6:92124321-92124340 None:intergenic 20.0%
!!! ATGTTTCAATGATAGATTTT+AGG - Chr6:92124167-92124186 None:intergenic 20.0%
!!! ATTTGGTTTTTATTGACTTT+AGG - Chr6:92128184-92128203 None:intergenic 20.0%
!!! CTTTTGCCATTTTTTTAATA+GGG + Chr6:92124092-92124111 MsG0680034649.01.T01:intron 20.0%
!!! GAAGAGTTTTTAAGATTTTA+AGG - Chr6:92128622-92128641 None:intergenic 20.0%
!!! TATTTTAAGGGAAATGTTAA+CGG - Chr6:92128992-92129011 None:intergenic 20.0%
!!! TTTATGGTTGATGAATTTTA+TGG - Chr6:92129411-92129430 None:intergenic 20.0%
!!! TTTGGTTTTTATTGACTTTA+GGG - Chr6:92128183-92128202 None:intergenic 20.0%
!!! TTTTGCCATTTTTTTAATAG+GGG + Chr6:92124093-92124112 MsG0680034649.01.T01:intron 20.0%
! AAAGTACATATAATATACGG+AGG + Chr6:92127630-92127649 MsG0680034649.01.T01:intron 25.0%
! AAATAGATACAAAGATTGAG+GGG + Chr6:92125864-92125883 MsG0680034649.01.T01:intron 25.0%
! AAGAAAACTAAATATTCGCA+CGG + Chr6:92127890-92127909 MsG0680034649.01.T01:intron 25.0%
! AATAACTTCAAGAACTTTAC+TGG - Chr6:92129041-92129060 None:intergenic 25.0%
! ACCAAACATGATACAAAATT+GGG - Chr6:92124203-92124222 None:intergenic 25.0%
! AGAAAGGAAAGAAAGAAAAA+AGG - Chr6:92123938-92123957 None:intergenic 25.0%
! ATAGACTATGATGTTATTGT+TGG - Chr6:92126577-92126596 None:intergenic 25.0%
! ATGAAAATTAATCCTGCTTT+CGG - Chr6:92127590-92127609 None:intergenic 25.0%
! ATGTTATAGGTCATGTAATT+TGG - Chr6:92125088-92125107 None:intergenic 25.0%
! ATTCAATTGCTTAAGTAACA+AGG - Chr6:92126136-92126155 None:intergenic 25.0%
! CAATAAAAACCAAATTTACG+CGG + Chr6:92128189-92128208 MsG0680034649.01.T01:intron 25.0%
! GGAAATACTAAAATCAAACT+TGG + Chr6:92126714-92126733 MsG0680034649.01.T01:CDS 25.0%
! GTATGTTATTCAAAAACACT+AGG + Chr6:92124599-92124618 MsG0680034649.01.T01:intron 25.0%
! GTATTTCCTTTAAACTCAAT+CGG - Chr6:92126702-92126721 None:intergenic 25.0%
! TAGACTATGATGTTATTGTT+GGG - Chr6:92126576-92126595 None:intergenic 25.0%
! TATTTGTAGAGAAAAATGAG+TGG - Chr6:92125548-92125567 None:intergenic 25.0%
! TCTCTTACATATTTAATGGA+GGG - Chr6:92128444-92128463 None:intergenic 25.0%
! TCTTCAAGCTATTAATGTAA+AGG + Chr6:92124870-92124889 MsG0680034649.01.T01:intron 25.0%
! TGATTATGTGAAGAAGAATA+AGG + Chr6:92123827-92123846 MsG0680034649.01.T01:CDS 25.0%
! TGTATATCTTAATGGTAGTT+TGG + Chr6:92125483-92125502 MsG0680034649.01.T01:intron 25.0%
! TTAAATTTAAGCTCGATAGT+AGG + Chr6:92129059-92129078 MsG0680034649.01.T01:intron 25.0%
! TTCTCTTACATATTTAATGG+AGG - Chr6:92128445-92128464 None:intergenic 25.0%
! TTTGACCCCTATTAAAAAAA+TGG - Chr6:92124101-92124120 None:intergenic 25.0%
!! AAATTCTTAAAGAGTGTATC+GGG - Chr6:92128851-92128870 None:intergenic 25.0%
!! AAATTGACGTTTTGTAAAAG+GGG + Chr6:92124054-92124073 MsG0680034649.01.T01:intron 25.0%
!! AACACACTGAAATTTTGTTA+TGG - Chr6:92127180-92127199 None:intergenic 25.0%
!! AATTTTGTATCATGTTTGGT+GGG + Chr6:92124203-92124222 MsG0680034649.01.T01:intron 25.0%
!! CAAAATTGACGTTTTGTAAA+AGG + Chr6:92124052-92124071 MsG0680034649.01.T01:intron 25.0%
!! CATCTAGATGATAACTTTTT+GGG + Chr6:92127851-92127870 MsG0680034649.01.T01:intron 25.0%
!! GAAATTCTTAAAGAGTGTAT+CGG - Chr6:92128852-92128871 None:intergenic 25.0%
!! GAACTATATATTCCCTTTTT+GGG - Chr6:92125914-92125933 None:intergenic 25.0%
!! GAATTTTTCTTGTGATGATT+AGG - Chr6:92129435-92129454 None:intergenic 25.0%
!! TAGATCATTGACATTTTGAA+AGG - Chr6:92126173-92126192 None:intergenic 25.0%
!! TGGTACAAAGACAATTATTT+TGG + Chr6:92129731-92129750 MsG0680034649.01.T01:CDS 25.0%
!! TGTTTGTGTGAGTTTTTAAA+GGG - Chr6:92126283-92126302 None:intergenic 25.0%
!! TTTATCTTGAATTCAAGTTC+TGG - Chr6:92128230-92128249 None:intergenic 25.0%
!!! AAGTTTTTTCATTTGATGGA+AGG - Chr6:92125385-92125404 None:intergenic 25.0%
!!! AATATTTTTGTGATGGTGAT+GGG - Chr6:92126329-92126348 None:intergenic 25.0%
!!! AATTTTGGTGACATAATTAC+GGG + Chr6:92127680-92127699 MsG0680034649.01.T01:intron 25.0%
!!! ACAAAGTTGTGTGTTTTTAT+AGG - Chr6:92129387-92129406 None:intergenic 25.0%
!!! ACACAAGTTTTTTCATTTGA+TGG - Chr6:92125389-92125408 None:intergenic 25.0%
!!! ACACACTGAAATTTTGTTAT+GGG - Chr6:92127179-92127198 None:intergenic 25.0%
!!! ACTCATTTTTCTCTACAAAT+AGG + Chr6:92125547-92125566 MsG0680034649.01.T01:intron 25.0%
!!! ATTTTAAGGGAAATGTTAAC+GGG - Chr6:92128991-92129010 None:intergenic 25.0%
!!! CAAAGTTGTGTGTTTTTATA+GGG - Chr6:92129386-92129405 None:intergenic 25.0%
!!! CAATTTTGGTGACATAATTA+CGG + Chr6:92127679-92127698 MsG0680034649.01.T01:intron 25.0%
!!! GACTTTGAAATTGTAGTATA+AGG - Chr6:92129645-92129664 None:intergenic 25.0%
AAAAAGCCTTTACAAACGTT+AGG - Chr6:92124647-92124666 None:intergenic 30.0%
AAAAAGGTAGCAAAATGTTC+AGG + Chr6:92124367-92124386 MsG0680034649.01.T01:intron 30.0%
AAGAACACAGATGATGAATA+CGG - Chr6:92124902-92124921 None:intergenic 30.0%
AATTCCTAGAAATCTACCAT+AGG - Chr6:92128113-92128132 None:intergenic 30.0%
AGAATATGTAAGAGAGAGAA+AGG - Chr6:92126051-92126070 None:intergenic 30.0%
AGACTATGATGTTATTGTTG+GGG - Chr6:92126575-92126594 None:intergenic 30.0%
ATACTTGTGTTCCAACAAAA+AGG + Chr6:92128154-92128173 MsG0680034649.01.T01:intron 30.0%
ATAGACTATGATGTTGTTGT+TGG - Chr6:92129687-92129706 None:intergenic 30.0%
ATGCATGTAACATACGATAA+AGG + Chr6:92124958-92124977 MsG0680034649.01.T01:intron 30.0%
ATTGCAACTTATGCAAAGTT+AGG + Chr6:92124121-92124140 MsG0680034649.01.T01:intron 30.0%
ATTGTTAAGAAGGTCTACAA+TGG + Chr6:92125208-92125227 MsG0680034649.01.T01:intron 30.0%
CAAGCTATTAATGTAAAGGA+AGG + Chr6:92124874-92124893 MsG0680034649.01.T01:intron 30.0%
CACCAAACATGATACAAAAT+TGG - Chr6:92124204-92124223 None:intergenic 30.0%
CCAAAAAGTTATCATCTAGA+TGG - Chr6:92127853-92127872 None:intergenic 30.0%
CGTTAAATTGAGGTTCAATA+AGG - Chr6:92124473-92124492 None:intergenic 30.0%
GACCTTCTTAACAATAATGT+CGG - Chr6:92125203-92125222 None:intergenic 30.0%
GGAAATACTAAGATCAAACT+TGG + Chr6:92129824-92129843 MsG0680034649.01.T01:CDS 30.0%
TAATTACGGGAAAATGAGAA+TGG + Chr6:92127693-92127712 MsG0680034649.01.T01:intron 30.0%
TATTGAACCTCAATTTAACG+TGG + Chr6:92124473-92124492 MsG0680034649.01.T01:intron 30.0%
TCTATATTCTCTTCTTACTC+TGG + Chr6:92126189-92126208 MsG0680034649.01.T01:intron 30.0%
TGTGAAGAAGAAGAAGAATA+AGG + Chr6:92123725-92123744 MsG0680034649.01.T01:CDS 30.0%
TGTTAGACATAAGAGAAAAC+AGG + Chr6:92128513-92128532 MsG0680034649.01.T01:intron 30.0%
TGTTATTCAAAAACACTAGG+AGG + Chr6:92124602-92124621 MsG0680034649.01.T01:intron 30.0%
TTCCGACATTATTGTTAAGA+AGG + Chr6:92125198-92125217 MsG0680034649.01.T01:intron 30.0%
TTGCAACTTATGCAAAGTTA+GGG + Chr6:92124122-92124141 MsG0680034649.01.T01:intron 30.0%
TTGTTAAGAAGGTCTACAAT+GGG + Chr6:92125209-92125228 MsG0680034649.01.T01:intron 30.0%
TTGTTCACTTTATCATTGAC+AGG - Chr6:92124256-92124275 None:intergenic 30.0%
! AACATTTTGCTACCTTTTTC+AGG - Chr6:92124366-92124385 None:intergenic 30.0%
! AATTGGTAGATTTTGTGGTT+TGG - Chr6:92126256-92126275 None:intergenic 30.0%
! AGAGGAATTTTTAACCTTGT+TGG + Chr6:92128271-92128290 MsG0680034649.01.T01:intron 30.0%
! ATTGTTTGAAATCTCTCCTA+TGG + Chr6:92128094-92128113 MsG0680034649.01.T01:intron 30.0%
! CAATTTTGTATCATGTTTGG+TGG + Chr6:92124202-92124221 MsG0680034649.01.T01:intron 30.0%
! CAGAAGAATACAACTTTTCT+TGG + Chr6:92129785-92129804 MsG0680034649.01.T01:CDS 30.0%
! CATCAAACATAGTCTTGAAA+TGG + Chr6:92124752-92124771 MsG0680034649.01.T01:intron 30.0%
! CCATCTAGATGATAACTTTT+TGG + Chr6:92127850-92127869 MsG0680034649.01.T01:intron 30.0%
! CGAACTATATATTCCCTTTT+TGG - Chr6:92125915-92125934 None:intergenic 30.0%
! CTTGTGATGATTAGGTTTTA+TGG - Chr6:92129427-92129446 None:intergenic 30.0%
! GTGTTTGTGTGAGTTTTTAA+AGG - Chr6:92126284-92126303 None:intergenic 30.0%
! TAGACTATGATGTTGTTGTT+GGG - Chr6:92129686-92129705 None:intergenic 30.0%
! TTTGGAAGCTTTTATAAGAG+TGG + Chr6:92126828-92126847 MsG0680034649.01.T01:CDS 30.0%
! TTTTAACCTTGTTGGAACTT+GGG + Chr6:92128279-92128298 MsG0680034649.01.T01:intron 30.0%
! TTTTATAGGGTGGAAATAGA+TGG - Chr6:92129373-92129392 None:intergenic 30.0%
! TTTTTAACCTTGTTGGAACT+TGG + Chr6:92128278-92128297 MsG0680034649.01.T01:intron 30.0%
!! ACATTTTGCTACCTTTTTCA+GGG - Chr6:92124365-92124384 None:intergenic 30.0%
!! AGTTTTTAAAGGGTGGAAAT+TGG - Chr6:92126273-92126292 None:intergenic 30.0%
!! ATCCTCAAGTTTGATTTTCT+AGG + Chr6:92129181-92129200 MsG0680034649.01.T01:intron 30.0%
!! CATGTAATTTTGAAGAAACC+TGG - Chr6:92128306-92128325 None:intergenic 30.0%
!! GAATATTTTTGTGATGGTGA+TGG - Chr6:92126330-92126349 None:intergenic 30.0%
!! GAATTCAAGTTCTGGTATTT+TGG - Chr6:92128222-92128241 None:intergenic 30.0%
!! GACTTTGAAATTGTAGTACA+AGG - Chr6:92126535-92126554 None:intergenic 30.0%
!! GTGGAAATAGATGGATTTTT+GGG - Chr6:92129364-92129383 None:intergenic 30.0%
!!! AACGTTTGTAAAGGCTTTTT+TGG + Chr6:92124647-92124666 MsG0680034649.01.T01:intron 30.0%
!!! AATAGATGGATTTTTGGGTA+TGG - Chr6:92129359-92129378 None:intergenic 30.0%
!!! TGTGGTTCTTTTGATTTTCT+AGG - Chr6:92129336-92129355 None:intergenic 30.0%
!!! TTTGTTGCTTTTGCTTTTCT+AGG - Chr6:92126233-92126252 None:intergenic 30.0%
AAAGATGTAGTCATTACGAC+TGG + Chr6:92124557-92124576 MsG0680034649.01.T01:intron 35.0%
AATCAAAGAGCAAGGTTTGT+TGG + Chr6:92123765-92123784 MsG0680034649.01.T01:CDS 35.0%
AATCGGAGATAGACAATTAG+AGG - Chr6:92125414-92125433 None:intergenic 35.0%
ACCTATTGGACAACAATTGT+TGG - Chr6:92124402-92124421 None:intergenic 35.0%
AGAAAGACAATCAAAGAGCA+AGG + Chr6:92123757-92123776 MsG0680034649.01.T01:CDS 35.0%
AGACATAAGAGAAAACAGGA+GGG + Chr6:92128517-92128536 MsG0680034649.01.T01:intron 35.0%
AGACGCGAAGAAGAATATAA+TGG - Chr6:92129525-92129544 None:intergenic 35.0%
AGGTGATTTCGTTGCAAAAT+AGG - Chr6:92129316-92129335 None:intergenic 35.0%
ATATCGTCCTCTTACAAAAC+AGG + Chr6:92128021-92128040 MsG0680034649.01.T01:intron 35.0%
ATTCTTTGTCATGATTACCG+CGG + Chr6:92126419-92126438 MsG0680034649.01.T01:intron 35.0%
ATTTGATGGAAGGTTAAGCA+AGG - Chr6:92125375-92125394 None:intergenic 35.0%
CACAAGAATACAACCTTTCT+TGG + Chr6:92126675-92126694 MsG0680034649.01.T01:CDS 35.0%
CACACGTGTGTATATCTTAA+TGG + Chr6:92125475-92125494 MsG0680034649.01.T01:intron 35.0%
CCATTGGAAGAAGAAATCAA+AGG - Chr6:92130007-92130026 None:intergenic 35.0%
CTTAACAATAATGTCGGAAG+TGG - Chr6:92125197-92125216 None:intergenic 35.0%
GAAGTTTGTGAAATTCGTTC+TGG + Chr6:92124278-92124297 MsG0680034649.01.T01:intron 35.0%
GACCTAGAAAATCAAACTTG+AGG - Chr6:92129186-92129205 None:intergenic 35.0%
GATTTGACGTGAAATGTGAA+AGG - Chr6:92125672-92125691 None:intergenic 35.0%
GGAAGATGACAAATCAACTA+TGG - Chr6:92124344-92124363 None:intergenic 35.0%
GGTCATGTAATTTGGTCAAT+AGG - Chr6:92125080-92125099 None:intergenic 35.0%
GTTCGAATTAGAGCTAAGTT+TGG + Chr6:92126810-92126829 MsG0680034649.01.T01:CDS 35.0%
GTTGTTTGTGATGTTGAACT+CGG - Chr6:92126508-92126527 None:intergenic 35.0%
TAATTTCTTATCTTGGGGAG+TGG - Chr6:92128561-92128580 None:intergenic 35.0%
TACAATGGAGATAGACTTCT+TGG - Chr6:92128066-92128085 None:intergenic 35.0%
TAGACATAAGAGAAAACAGG+AGG + Chr6:92128516-92128535 MsG0680034649.01.T01:intron 35.0%
TATCGTCCTCTTACAAAACA+GGG + Chr6:92128022-92128041 MsG0680034649.01.T01:intron 35.0%
TATTGGACAACAATTGTTGG+AGG - Chr6:92124399-92124418 None:intergenic 35.0%
TCCAACAATTGTTGTCCAAT+AGG + Chr6:92124398-92124417 MsG0680034649.01.T01:intron 35.0%
TCCTTACTTATCGCTATTTG+CGG + Chr6:92125245-92125264 MsG0680034649.01.T01:intron 35.0%
TCGAAAAGTAACAAGAGATG+AGG - Chr6:92127252-92127271 None:intergenic 35.0%
TCTTCGGATTCACAATGATT+TGG + Chr6:92126773-92126792 MsG0680034649.01.T01:CDS 35.0%
TGACAGGAATAACGTATATG+TGG - Chr6:92124240-92124259 None:intergenic 35.0%
TGAGTTCTACACAATCATCA+AGG - Chr6:92125694-92125713 None:intergenic 35.0%
TGATGTCGATGAATTACCAT+TGG - Chr6:92130023-92130042 None:intergenic 35.0%
TGCAACTTATGCAAAGTTAG+GGG + Chr6:92124123-92124142 MsG0680034649.01.T01:intron 35.0%
TGCATTCCTAACGTTTGTAA+AGG + Chr6:92124638-92124657 MsG0680034649.01.T01:intron 35.0%
TTGCTTAAGTAACAAGGAAC+TGG - Chr6:92126130-92126149 None:intergenic 35.0%
TTTGATGGAAGGTTAAGCAA+GGG - Chr6:92125374-92125393 None:intergenic 35.0%
TTTGTAAAAGGGGTAGACAT+GGG + Chr6:92124064-92124083 MsG0680034649.01.T01:intron 35.0%
TTTGTCATCTTCCCTGAAAA+AGG + Chr6:92124351-92124370 MsG0680034649.01.T01:intron 35.0%
TTTGTTAGGCAATGTGTTGA+GGG - Chr6:92124307-92124326 None:intergenic 35.0%
! ACTTGCTCTCTCTATTGTTT+TGG - Chr6:92127919-92127938 None:intergenic 35.0%
! AGACTATGATGTTGTTGTTG+GGG - Chr6:92129685-92129704 None:intergenic 35.0%
! AGAGAGAGTGTAATTAAAGG+TGG + Chr6:92128488-92128507 MsG0680034649.01.T01:intron 35.0%
! ATTTGTTAGGCAATGTGTTG+AGG - Chr6:92124308-92124327 None:intergenic 35.0%
! CCTTTGATTTCTTCTTCCAA+TGG + Chr6:92130004-92130023 MsG0680034649.01.T01:CDS 35.0%
! CTTGCTAACTTGTGTCATAA+GGG + Chr6:92128363-92128382 MsG0680034649.01.T01:intron 35.0%
! GAAGCTTTTATAAGAGTGGT+CGG + Chr6:92126832-92126851 MsG0680034649.01.T01:CDS 35.0%
! GCCCAATTTTGTATCATGTT+TGG + Chr6:92124199-92124218 MsG0680034649.01.T01:intron 35.0%
! GTGGAAATTGGTAGATTTTG+TGG - Chr6:92126261-92126280 None:intergenic 35.0%
! TCTTGCTAACTTGTGTCATA+AGG + Chr6:92128362-92128381 MsG0680034649.01.T01:intron 35.0%
! TTTTGTAAAAGGGGTAGACA+TGG + Chr6:92124063-92124082 MsG0680034649.01.T01:intron 35.0%
!! ACAAAACGTCAATTTTGACC+TGG - Chr6:92124049-92124068 None:intergenic 35.0%
!! AGTTGTGTGTTTTTATAGGG+TGG - Chr6:92129383-92129402 None:intergenic 35.0%
!! ATAAGGTGTTGTTGTTTGTG+AGG - Chr6:92129628-92129647 None:intergenic 35.0%
!! CTTTAGGGAATCCTTTTTGT+TGG - Chr6:92128168-92128187 None:intergenic 35.0%
!! GGTGGAAATAGATGGATTTT+TGG - Chr6:92129365-92129384 None:intergenic 35.0%
!! TTGACGAGTATTTTGAAGAG+AGG + Chr6:92126748-92126767 MsG0680034649.01.T01:CDS 35.0%
!! TTGTGTGAGTTTTTAAAGGG+TGG - Chr6:92126280-92126299 None:intergenic 35.0%
!!! AAGTTCTGGTATTTTGGTGA+TGG - Chr6:92128216-92128235 None:intergenic 35.0%
!!! CAACGGGATCATATTTTTTC+GGG + Chr6:92124436-92124455 MsG0680034649.01.T01:intron 35.0%
!!! GCAACGGGATCATATTTTTT+CGG + Chr6:92124435-92124454 MsG0680034649.01.T01:intron 35.0%
AAACTCAATCGGTCCAAGAA+AGG - Chr6:92126691-92126710 None:intergenic 40.0%
AACGAGAAGATAACACCAAC+AGG - Chr6:92124675-92124694 None:intergenic 40.0%
AAGCAATCGCTGTGATTCTT+CGG - Chr6:92129712-92129731 None:intergenic 40.0%
AAGCAATTACCGTGGTTCTT+CGG - Chr6:92126602-92126621 None:intergenic 40.0%
ACAAACAACATTGTCTCACG+TGG + Chr6:92127789-92127808 MsG0680034649.01.T01:intron 40.0%
ACATGTGCTGCAGATTTCAT+TGG + Chr6:92129471-92129490 MsG0680034649.01.T01:intron 40.0%
ACCGCAAATAGCGATAAGTA+AGG - Chr6:92125249-92125268 None:intergenic 40.0%
ACGAGAAGATAACACCAACA+GGG - Chr6:92124674-92124693 None:intergenic 40.0%
ACTCAGGTACAACCCAAAAA+GGG + Chr6:92125899-92125918 MsG0680034649.01.T01:intron 40.0%
AGTCTATTACCGAAGAACCA+CGG + Chr6:92126590-92126609 MsG0680034649.01.T01:CDS 40.0%
ATGAAATCTGCAGCACATGT+TGG - Chr6:92129471-92129490 None:intergenic 40.0%
ATGTGGAATTTCACGCTTGA+GGG - Chr6:92129578-92129597 None:intergenic 40.0%
ATTTAAGCTCGATAGTAGGC+AGG + Chr6:92129063-92129082 MsG0680034649.01.T01:intron 40.0%
CACAACAAACAACAACGAAG+AGG + Chr6:92128253-92128272 MsG0680034649.01.T01:intron 40.0%
CCATTGGAAGAAGAAACCAA+AGG - Chr6:92126897-92126916 None:intergenic 40.0%
CGAACAACGCTAGATGTTAT+AGG - Chr6:92125101-92125120 None:intergenic 40.0%
CTATGTTTGATGTATGCACC+TGG - Chr6:92124744-92124763 None:intergenic 40.0%
CTCACACTCCCTATTTATAG+TGG - Chr6:92125277-92125296 None:intergenic 40.0%
CTCTCCTATGGTAGATTTCT+AGG + Chr6:92128106-92128125 MsG0680034649.01.T01:intron 40.0%
CTTAAGTAACAAGGAACTGG+TGG - Chr6:92126127-92126146 None:intergenic 40.0%
CTTGGACCGATTGAGTTTAA+AGG + Chr6:92126693-92126712 MsG0680034649.01.T01:CDS 40.0%
GATACAAAATTGGGCAGACA+TGG - Chr6:92124194-92124213 None:intergenic 40.0%
GCAACTTATGCAAAGTTAGG+GGG + Chr6:92124124-92124143 MsG0680034649.01.T01:intron 40.0%
GGTTAGCGCCACTATAAATA+GGG + Chr6:92125266-92125285 MsG0680034649.01.T01:intron 40.0%
GTTACCTCCACGTTAAATTG+AGG - Chr6:92124483-92124502 None:intergenic 40.0%
GTTAGGAATGCATGCATATG+TGG - Chr6:92124630-92124649 None:intergenic 40.0%
GTTATTGTTGGGGTTTCGTA+CGG - Chr6:92126565-92126584 None:intergenic 40.0%
GTTGTTTGTGAGGTTGAACT+CGG - Chr6:92129618-92129637 None:intergenic 40.0%
TAATGTCGGAAGTGGAAAGT+TGG - Chr6:92125189-92125208 None:intergenic 40.0%
TATGTGGAATTTCACGCTTG+AGG - Chr6:92129579-92129598 None:intergenic 40.0%
TCAAAGAGTGAGAGAGATGA+AGG + Chr6:92123869-92123888 MsG0680034649.01.T01:CDS 40.0%
TCGTCGTTTAAGTGTTCCTT+TGG + Chr6:92126878-92126897 MsG0680034649.01.T01:CDS 40.0%
TCTTGGGATTCACGATGATT+TGG + Chr6:92129883-92129902 MsG0680034649.01.T01:CDS 40.0%
TGAACCTCAATTTAACGTGG+AGG + Chr6:92124476-92124495 MsG0680034649.01.T01:intron 40.0%
TTACAAAACAGGGTAGCCAA+TGG + Chr6:92128032-92128051 MsG0680034649.01.T01:intron 40.0%
TTCTTCTGTCCTTGATCGAA+CGG - Chr6:92129773-92129792 None:intergenic 40.0%
TTCTTGTGTCCTTGATCGAA+CGG - Chr6:92126663-92126682 None:intergenic 40.0%
TTGTAAAAGGGGTAGACATG+GGG + Chr6:92124065-92124084 MsG0680034649.01.T01:intron 40.0%
TTTGTACCAAGCAATTACCG+TGG - Chr6:92126610-92126629 None:intergenic 40.0%
! AGCGTTGTTCGACTATTTTG+TGG + Chr6:92125110-92125129 MsG0680034649.01.T01:intron 40.0%
! CAAGACTCTTTTCAGATTCC+AGG + Chr6:92124723-92124742 MsG0680034649.01.T01:intron 40.0%
! CCTTTGGTTTCTTCTTCCAA+TGG + Chr6:92126894-92126913 MsG0680034649.01.T01:CDS 40.0%
! CGATAAGTAAGGAAGCACAT+TGG - Chr6:92125238-92125257 None:intergenic 40.0%
! GCGTTGTTCGACTATTTTGT+GGG + Chr6:92125111-92125130 MsG0680034649.01.T01:intron 40.0%
! GGGAGAGAGAGTGTAATTAA+AGG + Chr6:92128485-92128504 MsG0680034649.01.T01:intron 40.0%
! GTCATAAGGGCACAAGATAA+GGG + Chr6:92128376-92128395 MsG0680034649.01.T01:intron 40.0%
! TCATAAGGGCACAAGATAAG+GGG + Chr6:92128377-92128396 MsG0680034649.01.T01:intron 40.0%
! TGATGATGACGAGTTACCAT+TGG - Chr6:92126913-92126932 None:intergenic 40.0%
! TGTCATAAGGGCACAAGATA+AGG + Chr6:92128375-92128394 MsG0680034649.01.T01:intron 40.0%
!! AAAGTTGGTAACCGAGAATG+GGG - Chr6:92125174-92125193 None:intergenic 40.0%
!! GAAAGTTGGTAACCGAGAAT+GGG - Chr6:92125175-92125194 None:intergenic 40.0%
!!! ATGGATTTTTGGGTATGGTG+TGG - Chr6:92129354-92129373 None:intergenic 40.0%
!!! ATTTTGAAGAGAGGCGTCTT+CGG + Chr6:92126757-92126776 MsG0680034649.01.T01:CDS 40.0%
!!! ATTTTGAAGAGAGGCGTCTT+GGG + Chr6:92126757-92126776 MsG0680034649.01.T01:CDS 40.0%
!!! TATTTTGAAGAGAGGCGTCT+TGG + Chr6:92126756-92126775 MsG0680034649.01.T01:CDS 40.0%
!!! TGTGATGGTGATGGGTTTTT+TGG - Chr6:92126321-92126340 None:intergenic 40.0%
AACAACATTGTCTCACGTGG+TGG + Chr6:92127792-92127811 MsG0680034649.01.T01:intron 45.0%
AGAACCACTGCTACATCTTC+TGG - Chr6:92126952-92126971 None:intergenic 45.0%
AGAGACAGAAGATGTAGCAG+TGG + Chr6:92126945-92126964 MsG0680034649.01.T01:intron 45.0%
AGCCAATGCCTCAGTTGATT+TGG - Chr6:92124826-92124845 None:intergenic 45.0%
AGTAACAAGGAACTGGTGGA+TGG - Chr6:92126123-92126142 None:intergenic 45.0%
AGTGAGAGAGATGAAGGTGA+GGG + Chr6:92123875-92123894 MsG0680034649.01.T01:intron 45.0%
AGTTTGACACCGTTCGATCA+AGG + Chr6:92126651-92126670 MsG0680034649.01.T01:CDS 45.0%
ATGTGGAACTTCACGCTTGA+GGG - Chr6:92126468-92126487 None:intergenic 45.0%
CATGTCTCTCAACAACATGC+TGG - Chr6:92124510-92124529 None:intergenic 45.0%
CGGTTAGCGCCACTATAAAT+AGG + Chr6:92125265-92125284 MsG0680034649.01.T01:intron 45.0%
CGTGAGTTTCCTTTGTTGAG+GGG + Chr6:92125139-92125158 MsG0680034649.01.T01:intron 45.0%
GAAAGTCGTCTTGTCTCACT+AGG + Chr6:92124796-92124815 MsG0680034649.01.T01:intron 45.0%
GAAGAACCACGGTAATTGCT+TGG + Chr6:92126601-92126620 MsG0680034649.01.T01:CDS 45.0%
GAAGAATCACAGCGATTGCT+TGG + Chr6:92129711-92129730 MsG0680034649.01.T01:CDS 45.0%
GACTCAGGTACAACCCAAAA+AGG + Chr6:92125898-92125917 MsG0680034649.01.T01:intron 45.0%
GACTTAGTTGAAGCTCGAGT+TGG - Chr6:92125316-92125335 None:intergenic 45.0%
GCGTGAGTTTCCTTTGTTGA+GGG + Chr6:92125138-92125157 MsG0680034649.01.T01:intron 45.0%
TACTATCCAGAAGATGACCG+CGG - Chr6:92126439-92126458 None:intergenic 45.0%
TAGGCATGCCAAATCAACTG+AGG + Chr6:92124815-92124834 MsG0680034649.01.T01:intron 45.0%
TATGTGGAACTTCACGCTTG+AGG - Chr6:92126469-92126488 None:intergenic 45.0%
TCCTGCTTTCGGAACAAAGA+AGG - Chr6:92127579-92127598 None:intergenic 45.0%
TGAGAGTAGCGTCTGTTATG+TGG - Chr6:92129595-92129614 None:intergenic 45.0%
TGAGGGAGAGATTACTATCC+AGG - Chr6:92126451-92126470 None:intergenic 45.0%
TGCCAAATCAACTGAGGCAT+TGG + Chr6:92124821-92124840 MsG0680034649.01.T01:intron 45.0%
TGCGTGAGTTTCCTTTGTTG+AGG + Chr6:92125137-92125156 MsG0680034649.01.T01:intron 45.0%
TGTAAAAGGGGTAGACATGG+GGG + Chr6:92124066-92124085 MsG0680034649.01.T01:intron 45.0%
TGTTATCTTCTCGTTGCTGG+TGG + Chr6:92124680-92124699 MsG0680034649.01.T01:intron 45.0%
! GTAACAAGGAACTGGTGGAT+GGG - Chr6:92126122-92126141 None:intergenic 45.0%
! TATCATGTTTGGTGGGAGAG+AGG + Chr6:92124210-92124229 MsG0680034649.01.T01:intron 45.0%
! TGGCTACCCTGTTTTGTAAG+AGG - Chr6:92128031-92128050 None:intergenic 45.0%
!! AGAGCAAGGTTTGTTGGATG+CGG + Chr6:92123771-92123790 MsG0680034649.01.T01:CDS 45.0%
!! GCTGCAGATTTCATTGGTTC+TGG + Chr6:92129477-92129496 MsG0680034649.01.T01:intron 45.0%
!! GGAAAGTTGGTAACCGAGAA+TGG - Chr6:92125176-92125195 None:intergenic 45.0%
!! TAGAAGCACCAAAACCAACG+AGG - Chr6:92126378-92126397 None:intergenic 45.0%
!! TGAGAGTAGCATCGGTTATG+TGG - Chr6:92126485-92126504 None:intergenic 45.0%
!! TGGTGTTATCTTCTCGTTGC+TGG + Chr6:92124677-92124696 MsG0680034649.01.T01:intron 45.0%
!!! AAGGCTTTTTTGGTCCCTGT+TGG + Chr6:92124657-92124676 MsG0680034649.01.T01:intron 45.0%
!!! GATGGTGATGGGTTTTTTGG+TGG - Chr6:92126318-92126337 None:intergenic 45.0%
!!! TTTTGGGTTGTACCTGAGTC+AGG - Chr6:92125898-92125917 None:intergenic 45.0%
!!! GAATTATTATTTTTTTTTTT+AGG + Chr6:92125813-92125832 MsG0680034649.01.T01:intron 5.0%
!!! GTTTATAAATATTATATTTT+TGG - Chr6:92126079-92126098 None:intergenic 5.0%
AAAACAGGAGGGATCTCCAC+CGG + Chr6:92128528-92128547 MsG0680034649.01.T01:intron 50.0%
AAACGACGACACTGCACAAC+TGG - Chr6:92126867-92126886 None:intergenic 50.0%
AAATGTGCTGCAGACCTCGT+TGG + Chr6:92126361-92126380 MsG0680034649.01.T01:intron 50.0%
AATCGACGACACTGCACAAC+TGG - Chr6:92129977-92129996 None:intergenic 50.0%
ACAGATCGTGATGCAGATGC+AGG + Chr6:92126978-92126997 MsG0680034649.01.T01:intron 50.0%
ACAGATCGTGATGCAGATGC+TGG + Chr6:92126978-92126997 MsG0680034649.01.T01:intron 50.0%
AGAGCCAGAAGATGTAGCAG+TGG + Chr6:92130055-92130074 MsG0680034649.01.T01:CDS 50.0%
AGCTACGAACCCCTCAACAA+AGG - Chr6:92125151-92125170 None:intergenic 50.0%
AGCTTGACACCGTTCGATCA+AGG + Chr6:92129761-92129780 MsG0680034649.01.T01:CDS 50.0%
ATATGATCCCGTTGCAGCTG+AGG - Chr6:92124430-92124449 None:intergenic 50.0%
CAGCTGAGGGGAATACCTAT+TGG - Chr6:92124416-92124435 None:intergenic 50.0%
CGTCTTTCTCGATTATCGCC+TGG + Chr6:92129540-92129559 MsG0680034649.01.T01:intron 50.0%
GAGTGAGAGAGATGAAGGTG+AGG + Chr6:92123874-92123893 MsG0680034649.01.T01:intron 50.0%
GCCTTCTTTGTTCCGAAAGC+AGG + Chr6:92127575-92127594 MsG0680034649.01.T01:intron 50.0%
TATGATCCCGTTGCAGCTGA+GGG - Chr6:92124429-92124448 None:intergenic 50.0%
TGATTACCGCGGTCATCTTC+TGG + Chr6:92126430-92126449 MsG0680034649.01.T01:intron 50.0%
TTGACCTGGTCAACGCTGAA+TGG - Chr6:92124035-92124054 None:intergenic 50.0%
! CTTCTTGGTGTGTGCTCCAT+TGG - Chr6:92128051-92128070 None:intergenic 50.0%
! GAACTCGGTGAGAGTAGCAT+CGG - Chr6:92126493-92126512 None:intergenic 50.0%
! TAAGGGCACAAGATAAGGGG+AGG + Chr6:92128380-92128399 MsG0680034649.01.T01:intron 50.0%
!! GAAGCTCGAGTTGGACAATG+AGG - Chr6:92125307-92125326 None:intergenic 50.0%
!! GGTGATGGACCGCGTAAATT+TGG - Chr6:92128201-92128220 None:intergenic 50.0%
!! TGCAGCACATGTTGGTGATG+AGG - Chr6:92129463-92129482 None:intergenic 50.0%
ATGATCCCGTTGCAGCTGAG+GGG - Chr6:92124428-92124447 None:intergenic 55.0%
CCTGGTCCCAAGTTCCAACA+AGG - Chr6:92128288-92128307 None:intergenic 55.0%
CCTTGTTGGAACTTGGGACC+AGG + Chr6:92128285-92128304 MsG0680034649.01.T01:intron 55.0%
GATGAAGGTGAGGGAGAGAG+AGG + Chr6:92123884-92123903 MsG0680034649.01.T01:intron 55.0%
GGGGACATTAGACCTGACTC+AGG + Chr6:92125883-92125902 MsG0680034649.01.T01:intron 55.0%
GGTATTCCCCTCAGCTGCAA+CGG + Chr6:92124419-92124438 MsG0680034649.01.T01:intron 55.0%
GGTTCGTAGCTCCCCATTCT+CGG + Chr6:92125160-92125179 MsG0680034649.01.T01:intron 55.0%
GTATTCCCCTCAGCTGCAAC+GGG + Chr6:92124420-92124439 MsG0680034649.01.T01:intron 55.0%
!! CATGCCATTCAGCGTTGACC+AGG + Chr6:92124028-92124047 MsG0680034649.01.T01:intron 55.0%
!!! GCTGCAGACCTCGTTGGTTT+TGG + Chr6:92126367-92126386 MsG0680034649.01.T01:intron 55.0%
CGACGACACTGCACAACTGG+TGG - Chr6:92126864-92126883 None:intergenic 60.0%
CTTGGGGAGTGGATCCTCTC+CGG - Chr6:92128550-92128569 None:intergenic 60.0%
GAAGGTGAGGGAGAGAGAGG+TGG + Chr6:92123887-92123906 MsG0680034649.01.T01:intron 60.0%
AGGAGGGATCTCCACCGGAG+AGG + Chr6:92128533-92128552 MsG0680034649.01.T01:intron 65.0%
GGTGAGGGAGAGAGAGGTGG+TGG + Chr6:92123890-92123909 MsG0680034649.01.T01:intron 65.0%
GGGGAGTGGATCCTCTCCGG+TGG - Chr6:92128547-92128566 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 92123720 92130117 92123720 ID=MsG0680034649.01;Name=MsG0680034649.01
Chr6 mRNA 92123720 92130117 92123720 ID=MsG0680034649.01.T01;Parent=MsG0680034649.01;Name=MsG0680034649.01.T01;_AED=0.21;_eAED=0.21;_QI=0|0|0|0.66|1|1|3|0|373
Chr6 exon 92123720 92123890 92123720 ID=MsG0680034649.01.T01:exon:5232;Parent=MsG0680034649.01.T01
Chr6 exon 92126480 92126915 92126480 ID=MsG0680034649.01.T01:exon:5233;Parent=MsG0680034649.01.T01
Chr6 exon 92129603 92130117 92129603 ID=MsG0680034649.01.T01:exon:5234;Parent=MsG0680034649.01.T01
Chr6 CDS 92123720 92123890 92123720 ID=MsG0680034649.01.T01:cds;Parent=MsG0680034649.01.T01
Chr6 CDS 92126480 92126915 92126480 ID=MsG0680034649.01.T01:cds;Parent=MsG0680034649.01.T01
Chr6 CDS 92129603 92130117 92129603 ID=MsG0680034649.01.T01:cds;Parent=MsG0680034649.01.T01
Gene Sequence

>MsG0680034649.01.T01

ATGGATGTGAAGAAGAAGAAGAATAAGGATGAAGAAGAGAAAGACAATCAAAGAGCAAGGTTTGTTGGATGCGGTAGCAAAATCTTCTCTTGTGATTTCTATGAAGATGATTATGTGAAGAAGAATAAGGATGAAGATGAGAAAGACAATCAAAGAGTGAGAGAGATGAAGTTCCACATAACCGATGCTACTCTCACCGAGTTCAACATCACAAACAACAATACCTTGTACTACAATTTCAAAGTCAATGTTACCGTACGAAACCCCAACAATAACATCATAGTCTATTACCGAAGAACCACGGTAATTGCTTGGTACAAAGACAATGATTTTAGTTATGTGAGTTTGACACCGTTCGATCAAGGACACAAGAATACAACCTTTCTTGGACCGATTGAGTTTAAAGGAAATACTAAAATCAAACTTGGACGTCAACAACTTGACGAGTATTTTGAAGAGAGGCGTCTTCGGATTCACAATGATTTGGCTGTTGATTTTGATGTTCGAATTAGAGCTAAGTTTGGAAGCTTTTATAAGAGTGGTCGGTTTAATCCACCAGTTGTGCAGTGTCGTCGTTTAAGTGTTCCTTTGGTTTCTTCTTCCAATGACGCTACTCTCACCGAGTTCAACCTCACAAACAACAACACCTTATACTACAATTTCAAAGTCAATGTCACAATACGAAACCCCAACAACAACATCATAGTCTATTACCGAAGAATCACAGCGATTGCTTGGTACAAAGACAATTATTTTGGTTATGTGAGCTTGACACCGTTCGATCAAGGACAGAAGAATACAACTTTTCTTGGACCGATTGAGTTTAAAGGAAATACTAAGATCAAACTTGGACGTCAACAACTTGACGAGTATTTTGAAGAGAGGCGTCTTGGGATTCACGATGATTTGGCTGTTGATTTTGATGTTCGAATTAGAGCTAAGTTTGGAAGCTTTTATAAGAGTGGTCAGTTTAATTCGCCAGTTGTGCAGTGTCGTCGATTAAGTGTTCCTTTGATTTCTTCTTCCAATGGTAATTCATCGACATCAACATTTTCTTTTAGAGCCAGAAGATGTAGCAGTGGTTCTTTCTTTACAGATCGTGATGCAGATGCTGGAGCTTGA
Protein sequence

>MsG0680034649.01.T01

MDVKKKKNKDEEEKDNQRARFVGCGSKIFSCDFYEDDYVKKNKDEDEKDNQRVREMKFHITDATLTEFNITNNNTLYYNFKVNVTVRNPNNNIIVYYRRTTVIAWYKDNDFSYVSLTPFDQGHKNTTFLGPIEFKGNTKIKLGRQQLDEYFEERRLRIHNDLAVDFDVRIRAKFGSFYKSGRFNPPVVQCRRLSVPLVSSSNDATLTEFNLTNNNTLYYNFKVNVTIRNPNNNIIVYYRRITAIAWYKDNYFGYVSLTPFDQGQKNTTFLGPIEFKGNTKIKLGRQQLDEYFEERRLGIHDDLAVDFDVRIRAKFGSFYKSGQFNSPVVQCRRLSVPLISSSNGNSSTSTFSFRARRCSSGSFFTDRDADAGA*