Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021697.01.T01 | XP_003630068.1 | 90.847 | 437 | 18 | 2 | 8 | 422 | 95 | 531 | 0 | 781 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021697.01.T01 | Q40588 | 49.095 | 442 | 194 | 8 | 8 | 422 | 92 | 529 | 8.52E-136 | 404 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021697.01.T01 | G7LAE5 | 90.847 | 437 | 18 | 2 | 8 | 422 | 95 | 531 | 0.0 | 781 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048036.01 | MsG0480021697.01 | 0.826512 | 2.605242e-54 | 2.448338e-51 |
| MsG0080048301.01 | MsG0480021697.01 | 0.806555 | 7.771748e-50 | 4.230972e-47 |
| MsG0080048347.01 | MsG0480021697.01 | 0.845783 | 3.274907e-59 | 5.519346e-56 |
| MsG0080048352.01 | MsG0480021697.01 | 0.855717 | 5.232156e-62 | 1.219249e-58 |
| MsG0180000234.01 | MsG0480021697.01 | 0.817089 | 3.950814e-52 | 2.849801e-49 |
| MsG0180000738.01 | MsG0480021697.01 | 0.823379 | 1.429526e-53 | 1.228712e-50 |
| MsG0180000929.01 | MsG0480021697.01 | 0.803092 | 4.110896e-49 | 2.047428e-46 |
| MsG0180001533.01 | MsG0480021697.01 | 0.810810 | 9.578243e-51 | 5.831261e-48 |
| MsG0180003235.01 | MsG0480021697.01 | 0.801331 | 9.470313e-49 | 4.510493e-46 |
| MsG0180003240.01 | MsG0480021697.01 | 0.857843 | 1.238241e-62 | 3.097996e-59 |
| MsG0180003248.01 | MsG0480021697.01 | 0.808743 | 2.665152e-50 | 1.536005e-47 |
| MsG0180003250.01 | MsG0480021697.01 | 0.806549 | 7.793141e-50 | 4.242014e-47 |
| MsG0180004203.01 | MsG0480021697.01 | 0.849944 | 2.336288e-60 | 4.503030e-57 |
| MsG0180004328.01 | MsG0480021697.01 | 0.866873 | 2.072707e-65 | 7.094903e-62 |
| MsG0180005356.01 | MsG0480021697.01 | 0.833456 | 5.278898e-56 | 6.082590e-53 |
| MsG0180005357.01 | MsG0480021697.01 | 0.803328 | 3.674020e-49 | 1.841000e-46 |
| MsG0180005358.01 | MsG0480021697.01 | 0.809096 | 2.240140e-50 | 1.303325e-47 |
| MsG0180005648.01 | MsG0480021697.01 | 0.849981 | 2.280017e-60 | 4.399723e-57 |
| MsG0280006442.01 | MsG0480021697.01 | 0.831627 | 1.499450e-55 | 1.636371e-52 |
| MsG0280010802.01 | MsG0480021697.01 | 0.838120 | 3.473554e-57 | 4.607140e-54 |
| MsG0380011613.01 | MsG0480021697.01 | 0.803616 | 3.202466e-49 | 1.616688e-46 |
| MsG0380013300.01 | MsG0480021697.01 | 0.805697 | 1.177882e-49 | 6.273627e-47 |
| MsG0380013452.01 | MsG0480021697.01 | 0.804046 | 2.607103e-49 | 1.330772e-46 |
| MsG0480018521.01 | MsG0480021697.01 | 0.810652 | 1.036464e-50 | 6.283446e-48 |
| MsG0480018768.01 | MsG0480021697.01 | 0.850937 | 1.229162e-60 | 2.447644e-57 |
| MsG0480020497.01 | MsG0480021697.01 | 0.802346 | 5.861078e-49 | 2.864397e-46 |
| MsG0480021697.01 | MsG0480022309.01 | 0.812655 | 3.800750e-51 | 2.430399e-48 |
| MsG0480021697.01 | MsG0480022310.01 | 0.816000 | 6.927291e-52 | 4.850188e-49 |
| MsG0480021697.01 | MsG0480022311.01 | 0.820709 | 5.942743e-53 | 4.737610e-50 |
| MsG0480021697.01 | MsG0480022638.01 | 0.827212 | 1.772248e-54 | 1.699747e-51 |
| MsG0480021697.01 | MsG0480023102.01 | 0.835110 | 2.030863e-56 | 2.458911e-53 |
| MsG0480021697.01 | MsG0480023349.01 | 0.891023 | 5.799351e-74 | 4.999187e-70 |
| MsG0480021697.01 | MsG0480023921.01 | 0.818729 | 1.683942e-52 | 1.270621e-49 |
| MsG0480021697.01 | MsG0580024408.01 | 0.842979 | 1.856751e-58 | 2.863070e-55 |
| MsG0480021697.01 | MsG0580024986.01 | 0.812317 | 4.505200e-51 | 2.855259e-48 |
| MsG0480021697.01 | MsG0580024990.01 | 0.832970 | 6.975923e-56 | 7.922076e-53 |
| MsG0480021697.01 | MsG0580025683.01 | 0.801019 | 1.097042e-48 | 5.184309e-46 |
| MsG0480021697.01 | MsG0580029555.01 | 0.802902 | 4.499658e-49 | 2.230419e-46 |
| MsG0480021697.01 | MsG0580029626.01 | 0.800752 | 1.243639e-48 | 5.836943e-46 |
| MsG0480021697.01 | MsG0580030133.01 | 0.821839 | 3.262217e-53 | 2.684300e-50 |
| MsG0480021697.01 | MsG0580030135.01 | 0.838219 | 3.273969e-57 | 4.355652e-54 |
| MsG0480021697.01 | MsG0680034649.01 | 0.812390 | 4.342610e-51 | 2.757690e-48 |
| MsG0480021697.01 | MsG0780036661.01 | 0.823914 | 1.071448e-53 | 9.350871e-51 |
| MsG0480021697.01 | MsG0780037917.01 | 0.816736 | 4.742154e-52 | 3.387614e-49 |
| MsG0480021697.01 | MsG0780037943.01 | 0.807720 | 4.402788e-50 | 2.470383e-47 |
| MsG0480021697.01 | MsG0780038963.01 | 0.806695 | 7.259767e-50 | 3.966360e-47 |
| MsG0480021697.01 | MsG0780039576.01 | 0.817268 | 3.601732e-52 | 2.610638e-49 |
| MsG0480021697.01 | MsG0780039665.01 | 0.806496 | 7.996766e-50 | 4.346863e-47 |
| MsG0480021697.01 | MsG0780039968.01 | 0.850679 | 1.453131e-60 | 2.868870e-57 |
| MsG0480021697.01 | MsG0780040181.01 | 0.839198 | 1.828552e-57 | 2.506665e-54 |
| MsG0480021697.01 | MsG0780041176.01 | 0.809711 | 1.653349e-50 | 9.778209e-48 |
| MsG0480021697.01 | MsG0780041574.01 | 0.836974 | 6.831330e-57 | 8.749295e-54 |
| MsG0480021697.01 | MsG0880046158.01 | 0.805603 | 1.232921e-49 | 6.550262e-47 |
| MsG0480021697.01 | MsG0880046429.01 | 0.820991 | 5.117526e-53 | 4.112485e-50 |
| MsG0480021697.01 | MsG0880047665.01 | 0.858777 | 6.524365e-63 | 1.684360e-59 |
| MsG0480021697.01 | MsG0880047747.01 | 0.839332 | 1.687946e-57 | 2.323524e-54 |
| MsG0380015459.01 | MsG0480021697.01 | 0.820252 | 7.567151e-53 | 5.956703e-50 |
| MsG0380016086.01 | MsG0480021697.01 | 0.844112 | 9.246351e-59 | 1.477709e-55 |
| MsG0380016481.01 | MsG0480021697.01 | 0.806649 | 7.422989e-50 | 4.050471e-47 |
| MsG0380017053.01 | MsG0480021697.01 | 0.803638 | 3.167894e-49 | 1.600168e-46 |
| MsG0380017151.01 | MsG0480021697.01 | 0.838143 | 3.425496e-57 | 4.546538e-54 |
| MsG0380017754.01 | MsG0480021697.01 | 0.850949 | 1.219948e-60 | 2.430220e-57 |
| MsG0380017859.01 | MsG0480021697.01 | 0.814603 | 1.416165e-51 | 9.544951e-49 |
| MsG0480018440.01 | MsG0480021697.01 | 0.806581 | 7.674641e-50 | 4.180735e-47 |
| MsG0280007216.01 | MsG0480021697.01 | 0.804358 | 2.244306e-49 | 1.154811e-46 |
| MsG0280007911.01 | MsG0480021697.01 | 0.808252 | 3.393414e-50 | 1.930899e-47 |
| MsG0280008601.01 | MsG0480021697.01 | 0.836925 | 7.030004e-57 | 8.989997e-54 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480021697.01 | MsG0380015860.01 | PPI |
| MsG0480021697.01 | MsG0380015858.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021697.01.T01 | MTR_8g091390 | 90.847 | 437 | 18 | 2 | 8 | 422 | 95 | 531 | 0.0 | 781 |
| MsG0480021697.01.T01 | MTR_3g078730 | 46.556 | 421 | 211 | 7 | 8 | 422 | 86 | 498 | 3.19e-123 | 368 |
| MsG0480021697.01.T01 | MTR_3g078700 | 46.062 | 419 | 216 | 6 | 8 | 422 | 87 | 499 | 3.91e-123 | 368 |
| MsG0480021697.01.T01 | MTR_3g078740 | 43.803 | 468 | 204 | 12 | 8 | 422 | 87 | 548 | 5.19e-121 | 364 |
| MsG0480021697.01.T01 | MTR_5g020600 | 31.121 | 437 | 274 | 10 | 8 | 422 | 94 | 525 | 2.39e-47 | 171 |
| MsG0480021697.01.T01 | MTR_5g081810 | 30.787 | 445 | 263 | 14 | 8 | 422 | 59 | 488 | 2.91e-47 | 170 |
| MsG0480021697.01.T01 | MTR_5g020620 | 30.752 | 439 | 272 | 10 | 8 | 422 | 90 | 520 | 5.12e-47 | 170 |
| MsG0480021697.01.T01 | MTR_5g069680 | 31.222 | 442 | 266 | 14 | 8 | 422 | 87 | 517 | 1.79e-44 | 162 |
| MsG0480021697.01.T01 | MTR_5g083360 | 29.490 | 451 | 276 | 13 | 7 | 422 | 83 | 526 | 2.69e-44 | 162 |
| MsG0480021697.01.T01 | MTR_3g071890 | 30.425 | 447 | 263 | 17 | 8 | 419 | 93 | 526 | 9.23e-44 | 161 |
| MsG0480021697.01.T01 | MTR_3g462760 | 30.290 | 449 | 262 | 15 | 7 | 422 | 85 | 515 | 1.26e-42 | 157 |
| MsG0480021697.01.T01 | MTR_8g027375 | 30.180 | 444 | 274 | 13 | 8 | 422 | 94 | 530 | 3.81e-41 | 154 |
| MsG0480021697.01.T01 | MTR_7g062250 | 31.057 | 454 | 264 | 18 | 8 | 422 | 94 | 537 | 5.35e-41 | 153 |
| MsG0480021697.01.T01 | MTR_7g458880 | 28.384 | 458 | 274 | 18 | 8 | 422 | 93 | 539 | 4.11e-39 | 148 |
| MsG0480021697.01.T01 | MTR_7g062310 | 28.913 | 460 | 268 | 17 | 8 | 422 | 107 | 552 | 1.37e-38 | 147 |
| MsG0480021697.01.T01 | MTR_2g008330 | 28.698 | 453 | 275 | 13 | 7 | 422 | 97 | 538 | 1.37e-38 | 147 |
| MsG0480021697.01.T01 | MTR_7g058690 | 28.043 | 460 | 273 | 18 | 8 | 422 | 93 | 539 | 4.67e-38 | 145 |
| MsG0480021697.01.T01 | MTR_5g073210 | 29.306 | 447 | 272 | 13 | 8 | 422 | 85 | 519 | 4.79e-38 | 145 |
| MsG0480021697.01.T01 | MTR_7g060460 | 28.633 | 461 | 270 | 18 | 8 | 422 | 93 | 540 | 6.60e-38 | 145 |
| MsG0480021697.01.T01 | MTR_3g101640 | 29.284 | 461 | 262 | 20 | 7 | 422 | 89 | 530 | 2.83e-36 | 140 |
| MsG0480021697.01.T01 | MTR_7g065980 | 27.033 | 455 | 281 | 14 | 9 | 422 | 86 | 530 | 6.24e-35 | 136 |
| MsG0480021697.01.T01 | MTR_4g064530 | 28.947 | 456 | 270 | 19 | 7 | 422 | 103 | 544 | 4.26e-34 | 134 |
| MsG0480021697.01.T01 | MTR_3g101635 | 29.204 | 452 | 260 | 17 | 13 | 422 | 92 | 525 | 6.84e-34 | 133 |
| MsG0480021697.01.T01 | MTR_4g064530 | 28.791 | 455 | 270 | 19 | 7 | 421 | 103 | 543 | 7.58e-34 | 133 |
| MsG0480021697.01.T01 | MTR_7g065970 | 27.056 | 462 | 271 | 16 | 9 | 422 | 86 | 529 | 1.34e-33 | 132 |
| MsG0480021697.01.T01 | MTR_4g019225 | 27.391 | 460 | 273 | 17 | 9 | 422 | 87 | 531 | 2.47e-31 | 126 |
| MsG0480021697.01.T01 | MTR_5g018270 | 26.218 | 431 | 270 | 12 | 8 | 422 | 91 | 489 | 3.32e-31 | 125 |
| MsG0480021697.01.T01 | MTR_8g479390 | 27.189 | 434 | 265 | 17 | 8 | 422 | 91 | 492 | 1.77e-29 | 120 |
| MsG0480021697.01.T01 | MTR_4g075690 | 25.472 | 424 | 266 | 12 | 16 | 422 | 101 | 491 | 3.64e-29 | 119 |
| MsG0480021697.01.T01 | MTR_4g132320 | 26.058 | 449 | 240 | 12 | 14 | 422 | 97 | 493 | 4.60e-29 | 119 |
| MsG0480021697.01.T01 | MTR_4g049390 | 26.790 | 433 | 257 | 14 | 14 | 422 | 93 | 489 | 1.72e-27 | 114 |
| MsG0480021697.01.T01 | MTR_3g083440 | 26.316 | 437 | 275 | 14 | 7 | 422 | 84 | 494 | 2.65e-27 | 114 |
| MsG0480021697.01.T01 | MTR_3g083450 | 26.316 | 437 | 275 | 14 | 7 | 422 | 85 | 495 | 4.56e-27 | 113 |
| MsG0480021697.01.T01 | MTR_4g048350 | 26.464 | 427 | 265 | 13 | 14 | 422 | 93 | 488 | 4.85e-27 | 113 |
| MsG0480021697.01.T01 | MTR_3g083390 | 26.316 | 437 | 275 | 14 | 7 | 422 | 84 | 494 | 5.28e-27 | 113 |
| MsG0480021697.01.T01 | MTR_3g083400 | 26.316 | 437 | 275 | 14 | 7 | 422 | 84 | 494 | 9.21e-27 | 112 |
| MsG0480021697.01.T01 | MTR_2g088080 | 25.167 | 449 | 244 | 12 | 14 | 422 | 15 | 411 | 1.09e-26 | 111 |
| MsG0480021697.01.T01 | MTR_3g083410 | 25.858 | 437 | 277 | 14 | 7 | 422 | 48 | 458 | 1.14e-26 | 112 |
| MsG0480021697.01.T01 | MTR_1g090707 | 25.571 | 438 | 277 | 15 | 8 | 422 | 84 | 495 | 1.40e-26 | 112 |
| MsG0480021697.01.T01 | MTR_3g008580 | 25.280 | 447 | 263 | 14 | 14 | 421 | 95 | 509 | 1.48e-26 | 112 |
| MsG0480021697.01.T01 | MTR_2g088080 | 25.167 | 449 | 244 | 12 | 14 | 422 | 96 | 492 | 2.10e-26 | 111 |
| MsG0480021697.01.T01 | MTR_3g115050 | 25.290 | 431 | 259 | 15 | 19 | 422 | 98 | 492 | 2.41e-26 | 111 |
| MsG0480021697.01.T01 | MTR_3g083430 | 26.087 | 437 | 276 | 14 | 7 | 422 | 84 | 494 | 4.78e-26 | 110 |
| MsG0480021697.01.T01 | MTR_4g083210 | 26.450 | 431 | 276 | 13 | 8 | 422 | 85 | 490 | 7.57e-26 | 110 |
| MsG0480021697.01.T01 | MTR_4g075690 | 25.330 | 379 | 234 | 11 | 16 | 377 | 101 | 447 | 2.88e-25 | 107 |
| MsG0480021697.01.T01 | MTR_4g083190 | 24.766 | 428 | 279 | 12 | 14 | 422 | 93 | 496 | 7.66e-24 | 104 |
| MsG0480021697.01.T01 | MTR_5g081790 | 39.583 | 144 | 78 | 3 | 281 | 421 | 283 | 420 | 4.60e-23 | 100 |
| MsG0480021697.01.T01 | MTR_1g026410 | 25.566 | 442 | 232 | 14 | 24 | 422 | 104 | 491 | 6.53e-23 | 101 |
| MsG0480021697.01.T01 | MTR_4g101650 | 26.754 | 456 | 261 | 16 | 7 | 422 | 86 | 508 | 6.66e-23 | 101 |
| MsG0480021697.01.T01 | MTR_7g051440 | 26.786 | 448 | 255 | 17 | 14 | 422 | 95 | 508 | 6.79e-23 | 101 |
| MsG0480021697.01.T01 | MTR_4g015120 | 40.141 | 142 | 81 | 2 | 281 | 422 | 379 | 516 | 1.59e-22 | 100 |
| MsG0480021697.01.T01 | MTR_8g479380 | 24.018 | 433 | 280 | 13 | 8 | 422 | 89 | 490 | 2.96e-21 | 96.3 |
| MsG0480021697.01.T01 | MTR_3g079660 | 52.000 | 50 | 24 | 0 | 373 | 422 | 5 | 54 | 9.79e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021697.01.T01 | AT4G39830 | 61.798 | 445 | 140 | 5 | 8 | 422 | 97 | 541 | 0.0 | 565 |
| MsG0480021697.01.T01 | AT4G39830 | 61.712 | 444 | 140 | 5 | 9 | 422 | 3 | 446 | 0.0 | 561 |
| MsG0480021697.01.T01 | AT4G39830 | 61.625 | 443 | 140 | 5 | 10 | 422 | 2 | 444 | 0.0 | 560 |
| MsG0480021697.01.T01 | AT4G39830 | 59.459 | 444 | 137 | 6 | 9 | 422 | 3 | 433 | 0.0 | 527 |
| MsG0480021697.01.T01 | AT5G21105 | 44.144 | 444 | 214 | 8 | 8 | 421 | 99 | 538 | 3.08e-121 | 363 |
| MsG0480021697.01.T01 | AT5G21105 | 44.270 | 445 | 214 | 8 | 8 | 422 | 99 | 539 | 4.24e-121 | 364 |
| MsG0480021697.01.T01 | AT5G21100 | 42.986 | 442 | 221 | 7 | 8 | 422 | 85 | 522 | 2.48e-120 | 362 |
| MsG0480021697.01.T01 | AT5G21105 | 45.690 | 348 | 175 | 7 | 85 | 422 | 5 | 348 | 6.46e-95 | 291 |
| MsG0480021697.01.T01 | AT5G58910 | 31.236 | 445 | 268 | 14 | 8 | 422 | 89 | 525 | 3.54e-47 | 170 |
| MsG0480021697.01.T01 | AT5G58910 | 31.236 | 445 | 268 | 14 | 8 | 422 | 90 | 526 | 4.14e-47 | 170 |
| MsG0480021697.01.T01 | AT1G18140 | 30.454 | 463 | 263 | 17 | 8 | 422 | 89 | 540 | 2.69e-46 | 168 |
| MsG0480021697.01.T01 | AT5G58910 | 31.066 | 441 | 266 | 14 | 12 | 422 | 50 | 482 | 7.98e-46 | 166 |
| MsG0480021697.01.T01 | AT2G38080 | 30.664 | 437 | 277 | 11 | 7 | 422 | 86 | 517 | 1.48e-45 | 166 |
| MsG0480021697.01.T01 | AT5G05390 | 30.290 | 449 | 270 | 16 | 7 | 422 | 86 | 524 | 2.71e-45 | 165 |
| MsG0480021697.01.T01 | AT5G01190 | 30.112 | 445 | 269 | 12 | 8 | 422 | 85 | 517 | 1.50e-40 | 152 |
| MsG0480021697.01.T01 | AT5G01190 | 30.112 | 445 | 269 | 12 | 8 | 422 | 71 | 503 | 1.72e-40 | 151 |
| MsG0480021697.01.T01 | AT5G09360 | 30.110 | 455 | 258 | 18 | 7 | 422 | 95 | 528 | 4.71e-40 | 150 |
| MsG0480021697.01.T01 | AT5G48100 | 30.201 | 447 | 264 | 19 | 13 | 422 | 87 | 522 | 9.99e-40 | 150 |
| MsG0480021697.01.T01 | AT5G01050 | 27.617 | 449 | 280 | 15 | 9 | 422 | 89 | 527 | 1.10e-39 | 150 |
| MsG0480021697.01.T01 | AT5G01040 | 28.125 | 448 | 277 | 15 | 9 | 422 | 89 | 525 | 2.09e-38 | 146 |
| MsG0480021697.01.T01 | AT5G60020 | 29.130 | 460 | 273 | 17 | 8 | 422 | 53 | 504 | 2.95e-38 | 145 |
| MsG0480021697.01.T01 | AT5G60020 | 29.130 | 460 | 273 | 17 | 8 | 422 | 85 | 536 | 3.86e-38 | 145 |
| MsG0480021697.01.T01 | AT5G60020 | 28.976 | 459 | 273 | 17 | 8 | 421 | 85 | 535 | 8.05e-38 | 144 |
| MsG0480021697.01.T01 | AT2G46570 | 27.617 | 449 | 279 | 13 | 8 | 422 | 7 | 443 | 1.16e-37 | 143 |
| MsG0480021697.01.T01 | AT2G46570 | 27.617 | 449 | 279 | 13 | 8 | 422 | 92 | 528 | 4.00e-37 | 142 |
| MsG0480021697.01.T01 | AT2G29130 | 28.477 | 453 | 276 | 16 | 8 | 422 | 90 | 532 | 1.87e-36 | 140 |
| MsG0480021697.01.T01 | AT2G40370 | 28.078 | 463 | 275 | 15 | 7 | 422 | 88 | 539 | 3.20e-35 | 137 |
| MsG0480021697.01.T01 | AT1G75790 | 29.398 | 432 | 252 | 17 | 14 | 422 | 93 | 494 | 5.06e-35 | 136 |
| MsG0480021697.01.T01 | AT2G30210 | 28.667 | 450 | 278 | 16 | 8 | 422 | 88 | 529 | 3.89e-34 | 134 |
| MsG0480021697.01.T01 | AT3G09220 | 27.602 | 442 | 282 | 15 | 12 | 421 | 90 | 525 | 1.57e-33 | 132 |
| MsG0480021697.01.T01 | AT5G07130 | 27.669 | 459 | 274 | 17 | 8 | 422 | 84 | 528 | 1.66e-33 | 132 |
| MsG0480021697.01.T01 | AT3G09220 | 27.483 | 433 | 276 | 15 | 21 | 421 | 2 | 428 | 8.05e-33 | 129 |
| MsG0480021697.01.T01 | AT5G07130 | 27.533 | 454 | 271 | 17 | 13 | 422 | 4 | 443 | 1.51e-32 | 129 |
| MsG0480021697.01.T01 | AT5G07130 | 27.533 | 454 | 271 | 17 | 13 | 422 | 4 | 443 | 1.51e-32 | 129 |
| MsG0480021697.01.T01 | AT5G66920 | 26.932 | 427 | 274 | 12 | 8 | 422 | 97 | 497 | 6.68e-32 | 127 |
| MsG0480021697.01.T01 | AT4G28090 | 27.315 | 432 | 252 | 14 | 16 | 422 | 99 | 493 | 6.06e-30 | 122 |
| MsG0480021697.01.T01 | AT2G23630 | 26.027 | 438 | 265 | 15 | 8 | 422 | 95 | 496 | 1.06e-29 | 121 |
| MsG0480021697.01.T01 | AT2G23630 | 26.027 | 438 | 265 | 15 | 8 | 422 | 90 | 491 | 1.45e-29 | 120 |
| MsG0480021697.01.T01 | AT1G76160 | 26.761 | 426 | 258 | 13 | 16 | 422 | 99 | 489 | 2.31e-29 | 120 |
| MsG0480021697.01.T01 | AT4G22010 | 27.563 | 439 | 261 | 16 | 7 | 422 | 85 | 489 | 3.75e-28 | 117 |
| MsG0480021697.01.T01 | AT5G03260 | 41.549 | 142 | 80 | 1 | 281 | 422 | 378 | 516 | 4.59e-27 | 114 |
| MsG0480021697.01.T01 | AT5G03260 | 32.836 | 201 | 123 | 5 | 8 | 197 | 86 | 285 | 2.38e-18 | 87.8 |
| MsG0480021697.01.T01 | AT1G21860 | 25.708 | 424 | 264 | 13 | 16 | 422 | 100 | 489 | 4.87e-27 | 113 |
| MsG0480021697.01.T01 | AT1G21850 | 26.478 | 423 | 262 | 14 | 16 | 422 | 100 | 489 | 5.48e-27 | 113 |
| MsG0480021697.01.T01 | AT1G55570 | 25.822 | 426 | 278 | 11 | 14 | 422 | 95 | 499 | 2.69e-26 | 111 |
| MsG0480021697.01.T01 | AT4G12420 | 26.872 | 454 | 261 | 17 | 8 | 422 | 85 | 506 | 8.19e-26 | 110 |
| MsG0480021697.01.T01 | AT4G12420 | 26.872 | 454 | 261 | 17 | 8 | 422 | 85 | 506 | 8.19e-26 | 110 |
| MsG0480021697.01.T01 | AT4G37160 | 24.594 | 431 | 283 | 12 | 7 | 422 | 90 | 493 | 9.30e-26 | 109 |
| MsG0480021697.01.T01 | AT1G41830 | 24.419 | 430 | 265 | 14 | 15 | 422 | 99 | 490 | 1.54e-25 | 109 |
| MsG0480021697.01.T01 | AT4G25240 | 24.554 | 448 | 266 | 13 | 14 | 422 | 95 | 509 | 7.41e-24 | 104 |
| MsG0480021697.01.T01 | AT4G25240 | 24.554 | 448 | 266 | 13 | 14 | 422 | 95 | 509 | 7.41e-24 | 104 |
| MsG0480021697.01.T01 | AT5G48450 | 26.682 | 431 | 269 | 15 | 14 | 422 | 95 | 500 | 1.42e-23 | 103 |
| MsG0480021697.01.T01 | AT3G13400 | 24.528 | 424 | 285 | 10 | 14 | 422 | 93 | 496 | 1.46e-23 | 103 |
| MsG0480021697.01.T01 | AT3G13400 | 24.528 | 424 | 285 | 10 | 14 | 422 | 93 | 496 | 1.46e-23 | 103 |
| MsG0480021697.01.T01 | AT5G48450 | 26.682 | 431 | 269 | 15 | 14 | 422 | 95 | 500 | 1.69e-23 | 103 |
| MsG0480021697.01.T01 | AT3G13390 | 24.769 | 432 | 275 | 13 | 14 | 422 | 94 | 498 | 4.31e-23 | 102 |
| MsG0480021697.01.T01 | AT5G51480 | 25.111 | 450 | 262 | 16 | 14 | 422 | 94 | 509 | 1.33e-22 | 100 |
| MsG0480021697.01.T01 | AT4G38420 | 24.883 | 426 | 273 | 14 | 16 | 422 | 101 | 498 | 1.11e-21 | 97.8 |
| MsG0480021697.01.T01 | AT1G55560 | 24.941 | 425 | 282 | 14 | 14 | 422 | 92 | 495 | 1.24e-20 | 94.7 |
| MsG0480021697.01.T01 | AT4G38420 | 24.874 | 398 | 252 | 14 | 16 | 394 | 101 | 470 | 1.35e-18 | 88.2 |
| MsG0480021697.01.T01 | AT4G38420 | 24.934 | 381 | 240 | 13 | 16 | 377 | 101 | 454 | 6.72e-18 | 85.9 |
| MsG0480021697.01.T01 | AT4G37160 | 23.575 | 386 | 254 | 11 | 7 | 377 | 90 | 449 | 8.33e-18 | 85.5 |
Find 94 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAATGATTACCTCTATT+TGG | 0.179597 | 4:+63047047 | None:intergenic |
| CCTCAGTCACTTCTGATTCA+TGG | 0.203458 | 4:-63047226 | MsG0480021697.01.T01:CDS |
| GGCACAATATTCTTCATATT+GGG | 0.211472 | 4:+63045714 | None:intergenic |
| TGGCACAATATTCTTCATAT+TGG | 0.250352 | 4:+63045713 | None:intergenic |
| GGCGACCTCATTGGATGGTT+TGG | 0.294439 | 4:+63046254 | None:intergenic |
| CAAAGGGAAGCAGGGGTATA+TGG | 0.305479 | 4:-63047509 | MsG0480021697.01.T01:CDS |
| GAGGTTTGATTGTGTAATTT+TGG | 0.312038 | 4:+63046153 | None:intergenic |
| CATTTGGTTGGACTGCTTTG+AGG | 0.330733 | 4:-63045683 | MsG0480021697.01.T01:CDS |
| CTATCAAAGTCATAAGAAAA+AGG | 0.331498 | 4:+63047455 | None:intergenic |
| CTGCTTCCCTTTGCATTCCA+TGG | 0.346356 | 4:+63047519 | None:intergenic |
| GCGACCTCATTGGATGGTTT+GGG | 0.364061 | 4:+63046255 | None:intergenic |
| GGTGGAGGTGGTGGAGATGT+TGG | 0.372687 | 4:+63046230 | None:intergenic |
| TTTATCGATTTGTTGTTGAT+AGG | 0.375099 | 4:-63047857 | MsG0480021697.01.T01:CDS |
| AGCCATCAGGTGGAGGTGTT+TGG | 0.375855 | 4:+63045982 | None:intergenic |
| CTTTAAGTGCAACAAGATAA+GGG | 0.376250 | 4:+63046027 | None:intergenic |
| CAAGATAAGGGGTGTGAGAT+AGG | 0.387480 | 4:+63046039 | None:intergenic |
| TGGGTACTTGGATATGGAAA+TGG | 0.389514 | 4:-63045783 | MsG0480021697.01.T01:CDS |
| GTGATCCAGTAGTTTCTTGA+TGG | 0.389887 | 4:+63046338 | None:intergenic |
| TCTTTAAGTGCAACAAGATA+AGG | 0.407309 | 4:+63046026 | None:intergenic |
| GCACTTAAAGAGAATATAAC+TGG | 0.408038 | 4:-63046014 | MsG0480021697.01.T01:CDS |
| ACGCATCCATGGCATCTTCA+TGG | 0.422581 | 4:-63045816 | MsG0480021697.01.T01:CDS |
| GTTTCTGCTGACAACATTTG+AGG | 0.423513 | 4:+63046316 | None:intergenic |
| TCCACCACCTCCACCAGCTT+GGG | 0.443905 | 4:-63046222 | MsG0480021697.01.T01:CDS |
| GAGACGACTGTTTGTGAAAA+GGG | 0.447475 | 4:+63047127 | None:intergenic |
| ACTCTATCTGAGGTTGTTGG+AGG | 0.454902 | 4:+63046134 | None:intergenic |
| TGAGACGACTGTTTGTGAAA+AGG | 0.460440 | 4:+63047126 | None:intergenic |
| CTATAGACGGTGTTCGTCAT+TGG | 0.461142 | 4:-63046085 | MsG0480021697.01.T01:CDS |
| CACGACAGATTGGAACTCCT+TGG | 0.462498 | 4:-63047935 | MsG0480021697.01.T01:CDS |
| TTATCGATTTGTTGTTGATA+GGG | 0.462550 | 4:-63047856 | MsG0480021697.01.T01:intron |
| CTCCACCACCTCCACCAGCT+TGG | 0.463071 | 4:-63046223 | MsG0480021697.01.T01:CDS |
| AGAACAACCCCGCCTGGTTT+AGG | 0.465849 | 4:-63046293 | MsG0480021697.01.T01:CDS |
| AGCACTCAGTTTCCAAATAG+AGG | 0.474284 | 4:-63047059 | MsG0480021697.01.T01:intron |
| TCACTTCTGATTCATGGAAA+AGG | 0.477199 | 4:-63047220 | MsG0480021697.01.T01:CDS |
| CATGGAATGCAAAGGGAAGC+AGG | 0.480781 | 4:-63047518 | MsG0480021697.01.T01:CDS |
| AGGTTTCGATCGGATAATCC+TGG | 0.493226 | 4:-63045663 | MsG0480021697.01.T01:CDS |
| TCCCAAGCTGGTGGAGGTGG+TGG | 0.495472 | 4:+63046221 | None:intergenic |
| GACTGCTTTGAGGTTTCGAT+CGG | 0.497349 | 4:-63045673 | MsG0480021697.01.T01:CDS |
| TGCCAGTGCACTCATTTGGT+TGG | 0.498134 | 4:-63045695 | MsG0480021697.01.T01:CDS |
| TAGAGATTCTTACCCAGAAA+AGG | 0.499524 | 4:+63046410 | None:intergenic |
| ATGACTCTATCTGAGGTTGT+TGG | 0.501248 | 4:+63046131 | None:intergenic |
| TTTGGTGAGCTTTGATTGCA+AGG | 0.510484 | 4:+63046171 | None:intergenic |
| GGAGGTGGTGGAGATGTTGG+TGG | 0.512910 | 4:+63046233 | None:intergenic |
| GACTCAACATTGTCCCAAGC+TGG | 0.516390 | 4:+63046209 | None:intergenic |
| GTGGTTTGTGCACGACAGAT+TGG | 0.516954 | 4:-63047945 | MsG0480021697.01.T01:CDS |
| TGCTCACCATGGAATGCAAA+GGG | 0.517320 | 4:-63047525 | MsG0480021697.01.T01:CDS |
| ATTGTGCCAGTGCACTCATT+TGG | 0.518075 | 4:-63045699 | MsG0480021697.01.T01:CDS |
| TGATCCAGTAGTTTCTTGAT+GGG | 0.518958 | 4:+63046339 | None:intergenic |
| GATGTTGGTGGCGACCTCAT+TGG | 0.527521 | 4:+63046245 | None:intergenic |
| CGATAAACAAAGGTGTCTCC+AGG | 0.528939 | 4:+63047873 | None:intergenic |
| GCACAATATTCTTCATATTG+GGG | 0.531639 | 4:+63045715 | None:intergenic |
| TTGTCCCAAGCTGGTGGAGG+TGG | 0.542475 | 4:+63046218 | None:intergenic |
| AAGACCCATCAAGAAACTAC+TGG | 0.542638 | 4:-63046343 | MsG0480021697.01.T01:CDS |
| TCAAATGCTACTTCTAGCAA+TGG | 0.543836 | 4:-63045918 | MsG0480021697.01.T01:CDS |
| TTATTAAAATCATAGCCATC+AGG | 0.546504 | 4:+63045969 | None:intergenic |
| TGAAAATGCCTAAACCAGGC+GGG | 0.549321 | 4:+63046285 | None:intergenic |
| AGAAACAGAACAACCCCGCC+TGG | 0.549767 | 4:-63046299 | MsG0480021697.01.T01:CDS |
| CAAACACCAGCAGGTACGCT+TGG | 0.551126 | 4:+63047175 | None:intergenic |
| CAATGGAAAGCCTACACACC+AGG | 0.557128 | 4:+63045645 | None:intergenic |
| TGTGAAAAGGGAGAGCACTC+AGG | 0.559596 | 4:+63047139 | None:intergenic |
| GATGAGTTACAAACACCAGC+AGG | 0.565048 | 4:+63047166 | None:intergenic |
| ATAATAGTGAGACGCATCCA+TGG | 0.567304 | 4:-63045827 | MsG0480021697.01.T01:CDS |
| TTGGTGGCGACCTCATTGGA+TGG | 0.568529 | 4:+63046249 | None:intergenic |
| TTATCACCAAGCGTACCTGC+TGG | 0.576751 | 4:-63047181 | MsG0480021697.01.T01:CDS |
| TCATGTCCATGAAGATGCCA+TGG | 0.579018 | 4:+63045810 | None:intergenic |
| ACATTGTCCCAAGCTGGTGG+AGG | 0.581616 | 4:+63046215 | None:intergenic |
| ATGGAATGCAAAGGGAAGCA+GGG | 0.581775 | 4:-63047517 | MsG0480021697.01.T01:CDS |
| AAATCATAGCCATCAGGTGG+AGG | 0.584412 | 4:+63045975 | None:intergenic |
| TCTCAATGTCCTATACTACC+TGG | 0.584728 | 4:-63047891 | MsG0480021697.01.T01:CDS |
| AAGGTGTCTCCAGGTAGTAT+AGG | 0.588687 | 4:+63047882 | None:intergenic |
| ATGACTGTTGTTGAAGCAGA+TGG | 0.592854 | 4:-63046446 | MsG0480021697.01.T01:CDS |
| GTCCAACCAAATGAGTGCAC+TGG | 0.595748 | 4:+63045693 | None:intergenic |
| ATGCTCACCATGGAATGCAA+AGG | 0.599562 | 4:-63047526 | MsG0480021697.01.T01:CDS |
| AAGAATCTCTACATATACTC+AGG | 0.600439 | 4:-63046398 | MsG0480021697.01.T01:CDS |
| TCAACATTGTCCCAAGCTGG+TGG | 0.600784 | 4:+63046212 | None:intergenic |
| AACCAAACACCTCCACCTGA+TGG | 0.600941 | 4:-63045984 | MsG0480021697.01.T01:CDS |
| AACACACAAAACACTATAGA+CGG | 0.600946 | 4:-63046098 | MsG0480021697.01.T01:CDS |
| GAAAATGCCTAAACCAGGCG+GGG | 0.606749 | 4:+63046286 | None:intergenic |
| CAAAACTATGACTCTATCTG+AGG | 0.612834 | 4:+63046124 | None:intergenic |
| ATCGGATAATCCTGGTGTGT+AGG | 0.614384 | 4:-63045655 | None:intergenic |
| CCATGAATCAGAAGTGACTG+AGG | 0.620367 | 4:+63047226 | None:intergenic |
| TTTAAGTGCAACAAGATAAG+GGG | 0.625406 | 4:+63046028 | None:intergenic |
| CATGAATCAGAAGTGACTGA+GGG | 0.627427 | 4:+63047227 | None:intergenic |
| AACAACAAATCGATAAACAA+AGG | 0.630677 | 4:+63047863 | None:intergenic |
| TATCTTTATCATGCTCACCA+TGG | 0.631127 | 4:-63047536 | MsG0480021697.01.T01:CDS |
| TGGAATGCAAAGGGAAGCAG+GGG | 0.640578 | 4:-63047516 | MsG0480021697.01.T01:CDS |
| TTAAAATCATAGCCATCAGG+TGG | 0.640896 | 4:+63045972 | None:intergenic |
| GCATGATAAAGATATGTACC+AGG | 0.647073 | 4:+63047545 | None:intergenic |
| TTAATATATAATGACTGATG+TGG | 0.651783 | 4:-63047964 | None:intergenic |
| TTGAAAATGCCTAAACCAGG+CGG | 0.654564 | 4:+63046284 | None:intergenic |
| TAGTTGAAAATGCCTAAACC+AGG | 0.667626 | 4:+63046281 | None:intergenic |
| CCTTCTGTTCCATAAAACCA+AGG | 0.696461 | 4:+63047918 | None:intergenic |
| ACTACCCAAACCATCCAATG+AGG | 0.700116 | 4:-63046259 | MsG0480021697.01.T01:CDS |
| GGTATATGGAATGATTCGTG+TGG | 0.705433 | 4:-63047495 | MsG0480021697.01.T01:CDS |
| ACTGAAGTTCAATACAACTG+TGG | 0.713693 | 4:-63045886 | MsG0480021697.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTGTTAATATCTATTT+TGG | - | Chr4:63046022-63046041 | MsG0480021697.01.T01:CDS | 10.0% |
| !! | AATGTGAGAAAAATTAAACA+AGG | + | Chr4:63047094-63047113 | None:intergenic | 20.0% |
| !! | AATTAAACAAGGTTAAATTG+TGG | + | Chr4:63047083-63047102 | None:intergenic | 20.0% |
| !! | TTAAAGCTTCAATAAAATCA+TGG | + | Chr4:63045857-63045876 | None:intergenic | 20.0% |
| !!! | ATCATTCAAGTTTTTAAACA+AGG | - | Chr4:63046604-63046623 | MsG0480021697.01.T01:intron | 20.0% |
| !!! | TAATTATGATATTTTCAGTG+TGG | - | Chr4:63047661-63047680 | MsG0480021697.01.T01:intron | 20.0% |
| !!! | TCACCAAGTTATAATTTTTT+GGG | + | Chr4:63047874-63047893 | None:intergenic | 20.0% |
| !!! | TTCACCAAGTTATAATTTTT+TGG | + | Chr4:63047875-63047894 | None:intergenic | 20.0% |
| ! | AACAACAAATCGATAAACAA+AGG | + | Chr4:63045750-63045769 | None:intergenic | 25.0% |
| ! | AATAGATCATGTTTGATCAA+CGG | + | Chr4:63045931-63045950 | None:intergenic | 25.0% |
| ! | AATGAATGATTACCTCTATT+TGG | + | Chr4:63046566-63046585 | None:intergenic | 25.0% |
| ! | AGACCCAAAAAATTATAACT+TGG | - | Chr4:63047868-63047887 | MsG0480021697.01.T01:CDS | 25.0% |
| ! | ATATTGTTGAACCACAATTT+AGG | - | Chr4:63046873-63046892 | MsG0480021697.01.T01:intron | 25.0% |
| ! | ATTGTTCATAAGTACTCTTA+TGG | + | Chr4:63046205-63046224 | None:intergenic | 25.0% |
| ! | CTATCAAAGTCATAAGAAAA+AGG | + | Chr4:63046158-63046177 | None:intergenic | 25.0% |
| ! | TATTGTTGAACCACAATTTA+GGG | - | Chr4:63046874-63046893 | MsG0480021697.01.T01:intron | 25.0% |
| ! | TTATTAAAATCATAGCCATC+AGG | + | Chr4:63047644-63047663 | None:intergenic | 25.0% |
| !! | TTCTTCAATTTTCTAATTGC+TGG | - | Chr4:63046336-63046355 | MsG0480021697.01.T01:CDS | 25.0% |
| !!! | GAAGCATTATTTTGAATGAT+TGG | - | Chr4:63046177-63046196 | MsG0480021697.01.T01:CDS | 25.0% |
| !!! | TTATCGATTTGTTGTTGATA+GGG | - | Chr4:63045754-63045773 | MsG0480021697.01.T01:CDS | 25.0% |
| !!! | TTTATCGATTTGTTGTTGAT+AGG | - | Chr4:63045753-63045772 | MsG0480021697.01.T01:CDS | 25.0% |
| AAACATGTCAAAACTAGTTC+TGG | + | Chr4:63047123-63047142 | None:intergenic | 30.0% | |
| AACACACAAAACACTATAGA+CGG | - | Chr4:63047512-63047531 | MsG0480021697.01.T01:CDS | 30.0% | |
| AAGAATCTCTACATATACTC+AGG | - | Chr4:63047212-63047231 | MsG0480021697.01.T01:CDS | 30.0% | |
| AAGTCATAAGAAAAAGGTTC+AGG | + | Chr4:63046152-63046171 | None:intergenic | 30.0% | |
| AGTACTTATGAACAATCTAC+TGG | - | Chr4:63046209-63046228 | MsG0480021697.01.T01:CDS | 30.0% | |
| AGTCATAAGAAAAAGGTTCA+GGG | + | Chr4:63046151-63046170 | None:intergenic | 30.0% | |
| ATCCATCTAATTATTTCCTC+TGG | + | Chr4:63046269-63046288 | None:intergenic | 30.0% | |
| CACGACAATGTTGTAAAAAT+CGG | - | Chr4:63046673-63046692 | MsG0480021697.01.T01:intron | 30.0% | |
| CTTTAAGTGCAACAAGATAA+GGG | + | Chr4:63047586-63047605 | None:intergenic | 30.0% | |
| GACATGTTTGTAATAATGCA+GGG | - | Chr4:63047134-63047153 | MsG0480021697.01.T01:CDS | 30.0% | |
| GCACAATATTCTTCATATTG+GGG | + | Chr4:63047898-63047917 | None:intergenic | 30.0% | |
| GCACTTAAAGAGAATATAAC+TGG | - | Chr4:63047596-63047615 | MsG0480021697.01.T01:intron | 30.0% | |
| GGCACAATATTCTTCATATT+GGG | + | Chr4:63047899-63047918 | None:intergenic | 30.0% | |
| GGTTAAATTGTGGTAATAGT+CGG | + | Chr4:63047073-63047092 | None:intergenic | 30.0% | |
| GTTAAATTGTGGTAATAGTC+GGG | + | Chr4:63047072-63047091 | None:intergenic | 30.0% | |
| TCTTTAAGTGCAACAAGATA+AGG | + | Chr4:63047587-63047606 | None:intergenic | 30.0% | |
| TGACATGTTTGTAATAATGC+AGG | - | Chr4:63047133-63047152 | MsG0480021697.01.T01:CDS | 30.0% | |
| TGGCACAATATTCTTCATAT+TGG | + | Chr4:63047900-63047919 | None:intergenic | 30.0% | |
| TTTAAGTGCAACAAGATAAG+GGG | + | Chr4:63047585-63047604 | None:intergenic | 30.0% | |
| ! | AGTTTTCGTCAAAATCTTAG+TGG | - | Chr4:63045881-63045900 | MsG0480021697.01.T01:CDS | 30.0% |
| ! | ATCAAACAAGTGAGACTTTT+GGG | + | Chr4:63046942-63046961 | None:intergenic | 30.0% |
| ! | ATCTTCATGGACATGATTTT+TGG | - | Chr4:63047807-63047826 | MsG0480021697.01.T01:intron | 30.0% |
| ! | CATGGTTCAATTGGTTTAAT+CGG | + | Chr4:63046918-63046937 | None:intergenic | 30.0% |
| ! | GAGGTTTGATTGTGTAATTT+TGG | + | Chr4:63047460-63047479 | None:intergenic | 30.0% |
| ! | TCTTCATGGACATGATTTTT+GGG | - | Chr4:63047808-63047827 | MsG0480021697.01.T01:intron | 30.0% |
| ! | TTTTTATAAAGAAGCCAGAC+TGG | + | Chr4:63046814-63046833 | None:intergenic | 30.0% |
| AATGACTACGACTACCATTA+AGG | - | Chr4:63047001-63047020 | MsG0480021697.01.T01:intron | 35.0% | |
| ACCAGGCTGTAACATTAAAT+AGG | + | Chr4:63046051-63046070 | None:intergenic | 35.0% | |
| ACCTATTTAATGTTACAGCC+TGG | - | Chr4:63046047-63046066 | MsG0480021697.01.T01:CDS | 35.0% | |
| ACTGAAGTTCAATACAACTG+TGG | - | Chr4:63047724-63047743 | MsG0480021697.01.T01:intron | 35.0% | |
| CAAAACTATGACTCTATCTG+AGG | + | Chr4:63047489-63047508 | None:intergenic | 35.0% | |
| GACCAGAGGAAATAATTAGA+TGG | - | Chr4:63046264-63046283 | MsG0480021697.01.T01:CDS | 35.0% | |
| GCATGATAAAGATATGTACC+AGG | + | Chr4:63046068-63046087 | None:intergenic | 35.0% | |
| TAGAGATTCTTACCCAGAAA+AGG | + | Chr4:63047203-63047222 | None:intergenic | 35.0% | |
| TAGTTGAAAATGCCTAAACC+AGG | + | Chr4:63047332-63047351 | None:intergenic | 35.0% | |
| TATCTTTATCATGCTCACCA+TGG | - | Chr4:63046074-63046093 | MsG0480021697.01.T01:CDS | 35.0% | |
| TCACTTCTGATTCATGGAAA+AGG | - | Chr4:63046390-63046409 | MsG0480021697.01.T01:CDS | 35.0% | |
| TCTGTGATAGTAGATTGATG+TGG | + | Chr4:63046982-63047001 | None:intergenic | 35.0% | |
| TGATCCAGTAGTTTCTTGAT+GGG | + | Chr4:63047274-63047293 | None:intergenic | 35.0% | |
| TTAAAATCATAGCCATCAGG+TGG | + | Chr4:63047641-63047660 | None:intergenic | 35.0% | |
| ! | ACACTATGTTGATCCTTTTC+TGG | - | Chr4:63047187-63047206 | MsG0480021697.01.T01:CDS | 35.0% |
| ! | CACTATGTTGATCCTTTTCT+GGG | - | Chr4:63047188-63047207 | MsG0480021697.01.T01:CDS | 35.0% |
| ! | GAACCACAATTTAGGGTTTA+GGG | - | Chr4:63046881-63046900 | MsG0480021697.01.T01:intron | 35.0% |
| ! | GATCAAACAAGTGAGACTTT+TGG | + | Chr4:63046943-63046962 | None:intergenic | 35.0% |
| ! | GTCTGCAATCCCTTTTAAAT+GGG | - | Chr4:63046235-63046254 | MsG0480021697.01.T01:CDS | 35.0% |
| ! | TCAAATGCTACTTCTAGCAA+TGG | - | Chr4:63047692-63047711 | MsG0480021697.01.T01:intron | 35.0% |
| ! | TGAACCACAATTTAGGGTTT+AGG | - | Chr4:63046880-63046899 | MsG0480021697.01.T01:intron | 35.0% |
| ! | TGTCTGCAATCCCTTTTAAA+TGG | - | Chr4:63046234-63046253 | MsG0480021697.01.T01:CDS | 35.0% |
| !!! | ATTGGAACTCCTTGGTTTTA+TGG | - | Chr4:63045683-63045702 | MsG0480021697.01.T01:CDS | 35.0% |
| !!! | CTTGGTTTTATGGAACAGAA+GGG | - | Chr4:63045693-63045712 | MsG0480021697.01.T01:CDS | 35.0% |
| !!! | GATTTTTGGGTACTTGGATA+TGG | - | Chr4:63047821-63047840 | MsG0480021697.01.T01:intron | 35.0% |
| !!! | TTGGTTTTATGGAACAGAAG+GGG | - | Chr4:63045694-63045713 | MsG0480021697.01.T01:CDS | 35.0% |
| AAGACCCATCAAGAAACTAC+TGG | - | Chr4:63047267-63047286 | MsG0480021697.01.T01:intron | 40.0% | |
| AGAATCGTATGTGACTGATG+TGG | + | Chr4:63047027-63047046 | None:intergenic | 40.0% | |
| AGCACTCAGTTTCCAAATAG+AGG | - | Chr4:63046551-63046570 | MsG0480021697.01.T01:intron | 40.0% | |
| AGTCTCACTTGTTTGATCAC+CGG | - | Chr4:63046945-63046964 | MsG0480021697.01.T01:intron | 40.0% | |
| ATAATAGTGAGACGCATCCA+TGG | - | Chr4:63047783-63047802 | MsG0480021697.01.T01:intron | 40.0% | |
| ATGACTGTTGTTGAAGCAGA+TGG | - | Chr4:63047164-63047183 | MsG0480021697.01.T01:CDS | 40.0% | |
| CATGAATCAGAAGTGACTGA+GGG | + | Chr4:63046386-63046405 | None:intergenic | 40.0% | |
| CCATAATTTCGTCAAGCTCA+CGG | + | Chr4:63045829-63045848 | None:intergenic | 40.0% | |
| CCTTCTGTTCCATAAAACCA+AGG | + | Chr4:63045695-63045714 | None:intergenic | 40.0% | |
| CGTGCATACATCAAAAACCA+TGG | + | Chr4:63046657-63046676 | None:intergenic | 40.0% | |
| GAAAAAGGTTCAGGGTCATT+AGG | + | Chr4:63046143-63046162 | None:intergenic | 40.0% | |
| GAGACGACTGTTTGTGAAAA+GGG | + | Chr4:63046486-63046505 | None:intergenic | 40.0% | |
| GGTATATGGAATGATTCGTG+TGG | - | Chr4:63046115-63046134 | MsG0480021697.01.T01:CDS | 40.0% | |
| GTGATCCAGTAGTTTCTTGA+TGG | + | Chr4:63047275-63047294 | None:intergenic | 40.0% | |
| GTTTCTGCTGACAACATTTG+AGG | + | Chr4:63047297-63047316 | None:intergenic | 40.0% | |
| TAATCTCAGTTGAGACACCA+TGG | - | Chr4:63046637-63046656 | MsG0480021697.01.T01:intron | 40.0% | |
| TCTCAATGTCCTATACTACC+TGG | - | Chr4:63045719-63045738 | MsG0480021697.01.T01:CDS | 40.0% | |
| TGACCCTAAACCCTAAATTG+TGG | + | Chr4:63046887-63046906 | None:intergenic | 40.0% | |
| TGAGACGACTGTTTGTGAAA+AGG | + | Chr4:63046487-63046506 | None:intergenic | 40.0% | |
| TGATGTGGTCAAAACTAGAC+CGG | + | Chr4:63046967-63046986 | None:intergenic | 40.0% | |
| TGGGTACTTGGATATGGAAA+TGG | - | Chr4:63047827-63047846 | MsG0480021697.01.T01:intron | 40.0% | |
| TGTTTGATCAACGGTGAGTT+TGG | + | Chr4:63045922-63045941 | None:intergenic | 40.0% | |
| TTGAAAATGCCTAAACCAGG+CGG | + | Chr4:63047329-63047348 | None:intergenic | 40.0% | |
| ! | AATCCCTTTTAAATGGGTGG+GGG | - | Chr4:63046241-63046260 | MsG0480021697.01.T01:CDS | 40.0% |
| ! | ATGACTCTATCTGAGGTTGT+TGG | + | Chr4:63047482-63047501 | None:intergenic | 40.0% |
| ! | CAATCCCTTTTAAATGGGTG+GGG | - | Chr4:63046240-63046259 | MsG0480021697.01.T01:CDS | 40.0% |
| ! | CAATTTAGGGTTTAGGGTCA+TGG | - | Chr4:63046887-63046906 | MsG0480021697.01.T01:intron | 40.0% |
| ! | CACAATTGATTCAACCAGTC+TGG | - | Chr4:63046797-63046816 | MsG0480021697.01.T01:intron | 40.0% |
| ! | CAGACTGGTTGAATCAATTG+TGG | + | Chr4:63046799-63046818 | None:intergenic | 40.0% |
| ! | GCAATCCCTTTTAAATGGGT+GGG | - | Chr4:63046239-63046258 | MsG0480021697.01.T01:CDS | 40.0% |
| ! | TGCAATCCCTTTTAAATGGG+TGG | - | Chr4:63046238-63046257 | MsG0480021697.01.T01:CDS | 40.0% |
| ! | TTTGGTGAGCTTTGATTGCA+AGG | + | Chr4:63047442-63047461 | None:intergenic | 40.0% |
| ! | TTTTCACAAACAGTCGTCTC+AGG | - | Chr4:63046486-63046505 | MsG0480021697.01.T01:intron | 40.0% |
| !! | ACAGTTCAACCTGGTTCTAT+CGG | + | Chr4:63046769-63046788 | None:intergenic | 40.0% |
| !! | CTTTTGGGTCATGGTTCAAT+TGG | + | Chr4:63046927-63046946 | None:intergenic | 40.0% |
| !!! | CCTTGGTTTTATGGAACAGA+AGG | - | Chr4:63045692-63045711 | MsG0480021697.01.T01:CDS | 40.0% |
| !!! | GGACATGATTTTTGGGTACT+TGG | - | Chr4:63047815-63047834 | MsG0480021697.01.T01:intron | 40.0% |
| AAATCATAGCCATCAGGTGG+AGG | + | Chr4:63047638-63047657 | None:intergenic | 45.0% | |
| ACTACCCAAACCATCCAATG+AGG | - | Chr4:63047351-63047370 | MsG0480021697.01.T01:intron | 45.0% | |
| AGGTTTCCAGTGAAACCAGT+CGG | + | Chr4:63046700-63046719 | None:intergenic | 45.0% | |
| AGGTTTCGATCGGATAATCC+TGG | - | Chr4:63047947-63047966 | MsG0480021697.01.T01:CDS | 45.0% | |
| ATGCTCACCATGGAATGCAA+AGG | - | Chr4:63046084-63046103 | MsG0480021697.01.T01:CDS | 45.0% | |
| ATGGAATGCAAAGGGAAGCA+GGG | - | Chr4:63046093-63046112 | MsG0480021697.01.T01:CDS | 45.0% | |
| ATTGTGCCAGTGCACTCATT+TGG | - | Chr4:63047911-63047930 | MsG0480021697.01.T01:CDS | 45.0% | |
| CATTTGGTTGGACTGCTTTG+AGG | - | Chr4:63047927-63047946 | MsG0480021697.01.T01:CDS | 45.0% | |
| CCATGAATCAGAAGTGACTG+AGG | + | Chr4:63046387-63046406 | None:intergenic | 45.0% | |
| CCGTGAGCTTGACGAAATTA+TGG | - | Chr4:63045826-63045845 | MsG0480021697.01.T01:CDS | 45.0% | |
| CCTCAGTCACTTCTGATTCA+TGG | - | Chr4:63046384-63046403 | MsG0480021697.01.T01:CDS | 45.0% | |
| CGGTGAGTTTGGCAAAATCA+TGG | + | Chr4:63045911-63045930 | None:intergenic | 45.0% | |
| CTATAGACGGTGTTCGTCAT+TGG | - | Chr4:63047525-63047544 | MsG0480021697.01.T01:CDS | 45.0% | |
| GATGAGTTACAAACACCAGC+AGG | + | Chr4:63046447-63046466 | None:intergenic | 45.0% | |
| GTTGTAAAAATCGGACCGAC+TGG | - | Chr4:63046682-63046701 | MsG0480021697.01.T01:intron | 45.0% | |
| TCATGTCCATGAAGATGCCA+TGG | + | Chr4:63047803-63047822 | None:intergenic | 45.0% | |
| TGAAAATGCCTAAACCAGGC+GGG | + | Chr4:63047328-63047347 | None:intergenic | 45.0% | |
| TGCTCACCATGGAATGCAAA+GGG | - | Chr4:63046085-63046104 | MsG0480021697.01.T01:CDS | 45.0% | |
| ! | AAGGTGTCTCCAGGTAGTAT+AGG | + | Chr4:63045731-63045750 | None:intergenic | 45.0% |
| ! | ACTCTATCTGAGGTTGTTGG+AGG | + | Chr4:63047479-63047498 | None:intergenic | 45.0% |
| ! | ATCCCTTTTAAATGGGTGGG+GGG | - | Chr4:63046242-63046261 | MsG0480021697.01.T01:CDS | 45.0% |
| ! | CAAGATAAGGGGTGTGAGAT+AGG | + | Chr4:63047574-63047593 | None:intergenic | 45.0% |
| ! | GATAGAACCAGGTTGAACTG+TGG | - | Chr4:63046768-63046787 | MsG0480021697.01.T01:intron | 45.0% |
| ! | TGTGACTGATGTGGCCTTAA+TGG | + | Chr4:63047018-63047037 | None:intergenic | 45.0% |
| !! | CAAGTGAGACTTTTGGGTCA+TGG | + | Chr4:63046936-63046955 | None:intergenic | 45.0% |
| !! | CAGTTCAACCTGGTTCTATC+GGG | + | Chr4:63046768-63046787 | None:intergenic | 45.0% |
| !! | CGATAAACAAAGGTGTCTCC+AGG | + | Chr4:63045740-63045759 | None:intergenic | 45.0% |
| !! | GACTGCTTTGAGGTTTCGAT+CGG | - | Chr4:63047937-63047956 | MsG0480021697.01.T01:CDS | 45.0% |
| AAACCTGCCGGTGTAACACA+TGG | - | Chr4:63046714-63046733 | MsG0480021697.01.T01:intron | 50.0% | |
| AACCAAACACCTCCACCTGA+TGG | - | Chr4:63047626-63047645 | MsG0480021697.01.T01:intron | 50.0% | |
| ACGCATCCATGGCATCTTCA+TGG | - | Chr4:63047794-63047813 | MsG0480021697.01.T01:intron | 50.0% | |
| CACGACAGATTGGAACTCCT+TGG | - | Chr4:63045675-63045694 | MsG0480021697.01.T01:CDS | 50.0% | |
| CATGGAATGCAAAGGGAAGC+AGG | - | Chr4:63046092-63046111 | MsG0480021697.01.T01:CDS | 50.0% | |
| CTGCTTCCCTTTGCATTCCA+TGG | + | Chr4:63046094-63046113 | None:intergenic | 50.0% | |
| CTGTGAGTGTGAACTGTCTG+CGG | + | Chr4:63046745-63046764 | None:intergenic | 50.0% | |
| GAAAATGCCTAAACCAGGCG+GGG | + | Chr4:63047327-63047346 | None:intergenic | 50.0% | |
| GACTCAACATTGTCCCAAGC+TGG | + | Chr4:63047404-63047423 | None:intergenic | 50.0% | |
| GCGACCTCATTGGATGGTTT+GGG | + | Chr4:63047358-63047377 | None:intergenic | 50.0% | |
| GGCTGAACCATGTGTTACAC+CGG | + | Chr4:63046724-63046743 | None:intergenic | 50.0% | |
| GGTTGAACCACAGTTCAACC+TGG | + | Chr4:63046778-63046797 | None:intergenic | 50.0% | |
| GTCCAACCAAATGAGTGCAC+TGG | + | Chr4:63047920-63047939 | None:intergenic | 50.0% | |
| GTCCCCCCACCCATTTAAAA+GGG | + | Chr4:63046247-63046266 | None:intergenic | 50.0% | |
| TCAACATTGTCCCAAGCTGG+TGG | + | Chr4:63047401-63047420 | None:intergenic | 50.0% | |
| TGCCAGTGCACTCATTTGGT+TGG | - | Chr4:63047915-63047934 | MsG0480021697.01.T01:CDS | 50.0% | |
| TGGAATGCAAAGGGAAGCAG+GGG | - | Chr4:63046094-63046113 | MsG0480021697.01.T01:CDS | 50.0% | |
| TGGTTTCACTGGAAACCTGC+CGG | - | Chr4:63046702-63046721 | MsG0480021697.01.T01:intron | 50.0% | |
| TTATCACCAAGCGTACCTGC+TGG | - | Chr4:63046429-63046448 | MsG0480021697.01.T01:CDS | 50.0% | |
| ! | CAAAGGGAAGCAGGGGTATA+TGG | - | Chr4:63046101-63046120 | MsG0480021697.01.T01:CDS | 50.0% |
| ! | GTGGTTTGTGCACGACAGAT+TGG | - | Chr4:63045665-63045684 | MsG0480021697.01.T01:CDS | 50.0% |
| !! | TGTGAAAAGGGAGAGCACTC+AGG | + | Chr4:63046474-63046493 | None:intergenic | 50.0% |
| ACATTGTCCCAAGCTGGTGG+AGG | + | Chr4:63047398-63047417 | None:intergenic | 55.0% | |
| ACTCACAGCCCGATAGAACC+AGG | - | Chr4:63046757-63046776 | MsG0480021697.01.T01:intron | 55.0% | |
| AGAAACAGAACAACCCCGCC+TGG | - | Chr4:63047311-63047330 | MsG0480021697.01.T01:intron | 55.0% | |
| AGAACAACCCCGCCTGGTTT+AGG | - | Chr4:63047317-63047336 | MsG0480021697.01.T01:intron | 55.0% | |
| CAAACACCAGCAGGTACGCT+TGG | + | Chr4:63046438-63046457 | None:intergenic | 55.0% | |
| GAACCATGTGTTACACCGGC+AGG | + | Chr4:63046720-63046739 | None:intergenic | 55.0% | |
| GGCGACCTCATTGGATGGTT+TGG | + | Chr4:63047359-63047378 | None:intergenic | 55.0% | |
| GGTCCCCCCACCCATTTAAA+AGG | + | Chr4:63046248-63046267 | None:intergenic | 55.0% | |
| !! | AGCCATCAGGTGGAGGTGTT+TGG | + | Chr4:63047631-63047650 | None:intergenic | 55.0% |
| !! | ATCGGACCGACTGGTTTCAC+TGG | - | Chr4:63046691-63046710 | MsG0480021697.01.T01:intron | 55.0% |
| !! | GATGTTGGTGGCGACCTCAT+TGG | + | Chr4:63047368-63047387 | None:intergenic | 55.0% |
| !! | TTGGTGGCGACCTCATTGGA+TGG | + | Chr4:63047364-63047383 | None:intergenic | 55.0% |
| TAAATGGGTGGGGGGACCAG+AGG | - | Chr4:63046250-63046269 | MsG0480021697.01.T01:CDS | 60.0% | |
| TCCACCACCTCCACCAGCTT+GGG | - | Chr4:63047388-63047407 | MsG0480021697.01.T01:intron | 60.0% | |
| TTGTCCCAAGCTGGTGGAGG+TGG | + | Chr4:63047395-63047414 | None:intergenic | 60.0% | |
| !! | GGAGGTGGTGGAGATGTTGG+TGG | + | Chr4:63047380-63047399 | None:intergenic | 60.0% |
| !! | GGTGGAGGTGGTGGAGATGT+TGG | + | Chr4:63047383-63047402 | None:intergenic | 60.0% |
| CTCCACCACCTCCACCAGCT+TGG | - | Chr4:63047387-63047406 | MsG0480021697.01.T01:intron | 65.0% | |
| TCCCAAGCTGGTGGAGGTGG+TGG | + | Chr4:63047392-63047411 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 63045656 | 63047976 | 63045656 | ID=MsG0480021697.01;Name=MsG0480021697.01 |
| Chr4 | mRNA | 63045656 | 63047976 | 63045656 | ID=MsG0480021697.01.T01;Parent=MsG0480021697.01;Name=MsG0480021697.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0|0|1|0.33|0.5|4|0|422 |
| Chr4 | exon | 63047857 | 63047976 | 63047857 | ID=MsG0480021697.01.T01:exon:9348;Parent=MsG0480021697.01.T01 |
| Chr4 | exon | 63047434 | 63047567 | 63047434 | ID=MsG0480021697.01.T01:exon:9349;Parent=MsG0480021697.01.T01 |
| Chr4 | exon | 63047060 | 63047252 | 63047060 | ID=MsG0480021697.01.T01:exon:9350;Parent=MsG0480021697.01.T01 |
| Chr4 | exon | 63045656 | 63046477 | 63045656 | ID=MsG0480021697.01.T01:exon:9351;Parent=MsG0480021697.01.T01 |
| Chr4 | CDS | 63047857 | 63047976 | 63047857 | ID=MsG0480021697.01.T01:cds;Parent=MsG0480021697.01.T01 |
| Chr4 | CDS | 63047434 | 63047567 | 63047434 | ID=MsG0480021697.01.T01:cds;Parent=MsG0480021697.01.T01 |
| Chr4 | CDS | 63047060 | 63047252 | 63047060 | ID=MsG0480021697.01.T01:cds;Parent=MsG0480021697.01.T01 |
| Chr4 | CDS | 63045656 | 63046477 | 63045656 | ID=MsG0480021697.01.T01:cds;Parent=MsG0480021697.01.T01 |
| Gene Sequence |
| Protein sequence |
