AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031009.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031009.01.T01 MTR_6g015950 95.536 336 15 0 4 339 1 336 0.0 672
MsG0680031009.01.T01 MTR_7g016090 59.639 332 133 1 3 334 2 332 1.87e-148 422
MsG0680031009.01.T01 MTR_7g016090 59.819 331 132 1 4 334 1 330 3.14e-148 421
MsG0680031009.01.T01 MTR_7g016080 56.083 337 137 3 4 338 1 328 1.60e-139 399
MsG0680031009.01.T01 MTR_1g070135 46.608 339 175 4 4 339 1 336 4.48e-109 322
MsG0680031009.01.T01 MTR_1g070080 47.774 337 169 5 6 338 2 335 3.30e-107 317
MsG0680031009.01.T01 MTR_1g070085 46.243 346 163 6 6 339 2 336 1.97e-104 310
MsG0680031009.01.T01 MTR_1g070085 46.243 346 163 6 6 339 2 336 1.97e-104 310
MsG0680031009.01.T01 MTR_1g070120 44.248 339 183 4 4 339 1 336 5.26e-103 306
MsG0680031009.01.T01 MTR_1g070135 47.148 263 133 4 4 263 1 260 9.46e-82 250
MsG0680031009.01.T01 MTR_1g070085 45.149 268 128 4 81 339 1 258 3.01e-78 240
MsG0680031009.01.T01 MTR_1g070100 48.908 229 115 2 112 339 27 254 7.97e-77 237
MsG0680031009.01.T01 MTR_3g092890 35.714 336 212 3 4 338 1 333 1.58e-72 228
MsG0680031009.01.T01 MTR_8g024120 36.119 335 205 6 1 330 1 331 1.09e-69 221
MsG0680031009.01.T01 MTR_7g068650 37.160 331 189 6 17 331 24 351 2.61e-67 216
MsG0680031009.01.T01 MTR_4g015790 37.059 340 186 7 17 331 23 359 1.51e-66 214
MsG0680031009.01.T01 MTR_5g082750 37.574 338 193 6 7 331 13 345 2.54e-66 213
MsG0680031009.01.T01 MTR_7g029655 38.080 323 180 10 19 330 45 358 6.99e-63 204
MsG0680031009.01.T01 MTR_1g070110 41.935 248 113 3 81 328 4 220 2.79e-62 199
MsG0680031009.01.T01 MTR_5g032870 35.077 325 192 8 18 329 14 332 2.25e-59 194
MsG0680031009.01.T01 MTR_3g070860 35.119 336 204 6 7 331 14 346 6.84e-59 194
MsG0680031009.01.T01 MTR_8g062600 37.143 315 172 8 41 339 66 370 2.17e-58 193
MsG0680031009.01.T01 MTR_2g069010 36.909 317 172 10 32 330 58 364 4.53e-58 192
MsG0680031009.01.T01 MTR_0032s0040 36.254 331 188 10 17 330 37 361 1.10e-57 191
MsG0680031009.01.T01 MTR_2g069060 38.487 304 166 10 38 330 45 338 1.56e-57 190
MsG0680031009.01.T01 MTR_5g032880 34.650 329 198 7 18 338 14 333 1.58e-57 197
MsG0680031009.01.T01 MTR_5g032880 34.018 341 203 8 9 332 339 674 1.68e-54 189
MsG0680031009.01.T01 MTR_1g034140 35.714 322 184 8 18 322 3 318 2.00e-57 189
MsG0680031009.01.T01 MTR_8g009090 37.500 304 172 7 38 330 56 352 3.14e-57 189
MsG0680031009.01.T01 MTR_7g056347 35.976 328 188 8 17 330 42 361 3.63e-57 189
MsG0680031009.01.T01 MTR_4g087090 34.769 325 178 12 23 323 12 326 5.78e-56 186
MsG0680031009.01.T01 MTR_8g041620 35.061 328 192 9 17 330 42 362 2.88e-55 185
MsG0680031009.01.T01 MTR_1g070185 35.276 326 186 9 17 330 43 355 3.57e-55 184
MsG0680031009.01.T01 MTR_7g062570 33.544 316 198 7 17 325 29 339 5.16e-55 184
MsG0680031009.01.T01 MTR_2g069090 35.241 332 198 7 19 339 44 369 5.23e-55 184
MsG0680031009.01.T01 MTR_3g063180 34.441 331 193 9 17 331 19 341 1.17e-54 182
MsG0680031009.01.T01 MTR_8g063070 36.593 317 175 10 38 338 63 369 1.19e-54 183
MsG0680031009.01.T01 MTR_7g102820 33.528 343 203 6 19 339 38 377 1.82e-54 183
MsG0680031009.01.T01 MTR_1g062110 34.483 319 191 6 19 322 38 353 2.48e-54 182
MsG0680031009.01.T01 MTR_2g068950 37.171 304 164 9 38 324 59 352 4.03e-54 182
MsG0680031009.01.T01 MTR_1g048940 32.803 314 197 6 17 322 22 329 6.53e-54 181
MsG0680031009.01.T01 MTR_7g062580 32.423 293 185 7 39 324 52 338 9.53e-54 181
MsG0680031009.01.T01 MTR_8g028435 35.314 303 180 6 38 330 56 352 9.57e-54 181
MsG0680031009.01.T01 MTR_1g093140 34.505 313 180 9 33 330 64 366 9.61e-54 181
MsG0680031009.01.T01 MTR_3g088565 35.443 316 172 9 41 336 2 305 9.90e-54 179
MsG0680031009.01.T01 MTR_8g009080 36.667 300 167 9 33 322 91 377 1.37e-53 181
MsG0680031009.01.T01 MTR_7g081710 35.783 313 190 6 17 322 23 331 3.03e-53 179
MsG0680031009.01.T01 MTR_1g093110 34.591 318 185 10 35 338 62 370 3.09e-53 179
MsG0680031009.01.T01 MTR_8g009110 35.855 304 176 8 39 330 57 353 3.78e-53 179
MsG0680031009.01.T01 MTR_8g041600 34.545 330 191 10 17 330 42 362 4.02e-53 179
MsG0680031009.01.T01 MTR_2g069020 36.039 308 165 9 41 330 66 359 4.47e-53 179
MsG0680031009.01.T01 MTR_7g063730 32.423 293 185 7 39 324 61 347 6.55e-53 178
MsG0680031009.01.T01 MTR_2g068960 37.542 301 161 9 41 324 62 352 6.83e-53 178
MsG0680031009.01.T01 MTR_2g069020 36.039 308 165 9 41 330 66 359 7.99e-53 179
MsG0680031009.01.T01 MTR_7g062550 34.915 295 177 7 39 325 57 344 9.51e-53 178
MsG0680031009.01.T01 MTR_4g087110 33.934 333 181 12 19 322 4 326 1.11e-52 177
MsG0680031009.01.T01 MTR_8g469400 37.226 274 152 6 67 330 85 348 1.33e-52 177
MsG0680031009.01.T01 MTR_1g093120 34.545 330 191 10 16 330 39 358 1.63e-52 177
MsG0680031009.01.T01 MTR_4g024660 33.544 316 186 7 38 338 63 369 1.68e-52 177
MsG0680031009.01.T01 MTR_4g117880 35.593 295 169 7 41 322 59 345 5.24e-52 176
MsG0680031009.01.T01 MTR_8g075890 33.232 328 205 7 18 336 15 337 1.22e-51 175
MsG0680031009.01.T01 MTR_8g009160 34.539 304 181 7 38 330 56 352 1.23e-51 175
MsG0680031009.01.T01 MTR_1g034120 33.131 329 185 12 22 322 7 328 1.34e-51 174
MsG0680031009.01.T01 MTR_3g072820 32.198 323 210 6 6 322 5 324 1.79e-51 174
MsG0680031009.01.T01 MTR_3g117420 33.651 315 190 8 30 332 40 347 2.66e-51 174
MsG0680031009.01.T01 MTR_2g069300 35.077 325 190 11 19 330 30 346 4.13e-51 173
MsG0680031009.01.T01 MTR_8g009170 33.750 320 188 9 33 335 51 363 5.13e-51 173
MsG0680031009.01.T01 MTR_5g022020 32.424 330 207 9 7 326 5 328 8.65e-51 172
MsG0680031009.01.T01 MTR_1g034060 32.523 329 187 11 22 322 7 328 9.67e-51 172
MsG0680031009.01.T01 MTR_7g062600 32.423 293 186 7 39 324 48 335 1.00e-50 172
MsG0680031009.01.T01 MTR_2g025120 33.227 313 187 8 40 339 2 305 1.44e-50 171
MsG0680031009.01.T01 MTR_8g008930 35.948 306 175 9 38 330 56 353 1.61e-50 172
MsG0680031009.01.T01 MTR_2g069210 35.294 323 191 9 19 330 40 355 2.04e-50 172
MsG0680031009.01.T01 MTR_8g075830 32.317 328 208 7 18 336 15 337 2.18e-50 172
MsG0680031009.01.T01 MTR_5g055680 32.087 321 205 7 16 329 21 335 7.95e-50 170
MsG0680031009.01.T01 MTR_0009s0050 32.119 302 190 7 36 329 41 335 2.72e-49 169
MsG0680031009.01.T01 MTR_0009s0050 32.119 302 190 7 36 329 41 335 3.52e-49 168
MsG0680031009.01.T01 MTR_2g437380 31.875 320 201 8 18 326 27 340 3.56e-49 169
MsG0680031009.01.T01 MTR_5g065010 31.818 330 200 9 6 322 5 322 7.72e-49 167
MsG0680031009.01.T01 MTR_2g069190 34.185 313 191 7 35 338 61 367 1.74e-48 167
MsG0680031009.01.T01 MTR_2g072890 32.298 322 203 8 17 329 27 342 3.50e-48 166
MsG0680031009.01.T01 MTR_5g048550 32.919 322 195 9 19 329 24 335 4.54e-48 165
MsG0680031009.01.T01 MTR_7g105070 34.259 324 195 10 18 330 34 350 7.67e-48 165
MsG0680031009.01.T01 MTR_8g006930 37.621 311 170 10 35 330 60 361 9.75e-48 165
MsG0680031009.01.T01 MTR_3g026150 30.986 355 212 9 1 329 1 348 2.21e-47 164
MsG0680031009.01.T01 MTR_5g059130 30.792 341 225 7 1 335 1 336 2.53e-47 163
MsG0680031009.01.T01 MTR_4g087100 32.198 323 194 10 22 322 7 326 2.81e-47 163
MsG0680031009.01.T01 MTR_4g119410 36.527 334 187 11 21 338 45 369 3.68e-47 164
MsG0680031009.01.T01 MTR_3g072810 31.722 331 219 5 6 332 4 331 4.64e-47 162
MsG0680031009.01.T01 MTR_5g048570 31.126 302 197 6 34 329 37 333 5.05e-47 162
MsG0680031009.01.T01 MTR_8g074070 32.660 297 182 7 30 315 40 329 5.29e-47 162
MsG0680031009.01.T01 MTR_3g083370 33.876 307 184 8 42 339 7 303 5.36e-47 161
MsG0680031009.01.T01 MTR_3g091350 34.130 293 177 7 39 322 56 341 5.71e-47 163
MsG0680031009.01.T01 MTR_5g055900 29.688 320 214 6 16 329 21 335 6.47e-47 162
MsG0680031009.01.T01 MTR_8g074050 31.190 311 203 6 30 332 40 347 8.25e-47 162
MsG0680031009.01.T01 MTR_1g043810 33.939 330 187 10 17 329 29 344 2.00e-46 161
MsG0680031009.01.T01 MTR_3g058610 32.915 319 197 9 17 324 14 326 2.64e-46 160
MsG0680031009.01.T01 MTR_5g085330 33.226 310 186 7 42 339 8 308 3.12e-46 159
MsG0680031009.01.T01 MTR_3g091360 32.288 319 196 8 34 339 44 355 4.00e-46 160
MsG0680031009.01.T01 MTR_4g087120 32.036 334 186 12 19 322 4 326 5.60e-46 160
MsG0680031009.01.T01 MTR_8g064200 30.769 325 203 8 17 329 27 341 1.22e-45 159
MsG0680031009.01.T01 MTR_1g043760 33.735 332 190 10 17 332 29 346 1.25e-45 159
MsG0680031009.01.T01 MTR_8g064200 30.769 325 203 8 17 329 32 346 1.58e-45 159
MsG0680031009.01.T01 MTR_2g068840 31.269 323 199 7 19 327 33 346 1.95e-45 159
MsG0680031009.01.T01 MTR_4g116010 31.973 294 191 5 42 330 50 339 2.90e-45 158
MsG0680031009.01.T01 MTR_1g043770 35.505 307 172 8 38 330 49 343 3.25e-45 158
MsG0680031009.01.T01 MTR_5g048470 30.945 307 190 8 35 329 46 342 8.53e-45 157
MsG0680031009.01.T01 MTR_0328s0030 31.949 313 204 4 17 324 20 328 1.27e-44 156
MsG0680031009.01.T01 MTR_4g093840 33.446 296 175 8 42 324 62 348 1.82e-44 156
MsG0680031009.01.T01 MTR_1g102070 33.762 311 170 8 42 327 59 358 2.09e-44 156
MsG0680031009.01.T01 MTR_5g048740 31.949 313 201 8 17 322 20 327 3.12e-44 155
MsG0680031009.01.T01 MTR_5g059140 30.164 305 202 6 16 312 15 316 3.24e-44 155
MsG0680031009.01.T01 MTR_7g056393 36.656 311 173 9 35 330 60 361 4.16e-44 155
MsG0680031009.01.T01 MTR_2g069060 40.496 242 122 10 38 269 23 252 6.65e-44 152
MsG0680031009.01.T01 MTR_1g043775 35.548 301 163 10 39 322 51 337 7.21e-44 154
MsG0680031009.01.T01 MTR_5g055690 30.233 301 200 5 35 329 40 336 1.28e-43 154
MsG0680031009.01.T01 MTR_7g062560 29.393 313 201 8 18 324 37 335 1.30e-43 154
MsG0680031009.01.T01 MTR_3g117485 31.321 265 177 4 56 317 69 331 1.75e-43 153
MsG0680031009.01.T01 MTR_6g464620 33.828 337 181 12 18 327 42 363 1.76e-43 154
MsG0680031009.01.T01 MTR_4g087140 30.655 336 189 14 19 322 4 327 1.81e-43 153
MsG0680031009.01.T01 MTR_8g033380 33.232 328 196 10 17 327 31 352 5.73e-43 152
MsG0680031009.01.T01 MTR_7g078010 34.043 329 173 10 35 338 60 369 5.73e-43 152
MsG0680031009.01.T01 MTR_2g072910 31.366 322 206 8 17 329 26 341 1.38e-42 151
MsG0680031009.01.T01 MTR_1g032220 33.436 326 190 12 18 329 47 359 2.33e-42 151
MsG0680031009.01.T01 MTR_5g055820 29.907 321 211 7 17 329 22 336 2.38e-42 150
MsG0680031009.01.T01 MTR_1g086550 32.131 305 182 7 42 327 20 318 5.56e-42 149
MsG0680031009.01.T01 MTR_3g117485 31.395 258 172 4 63 317 4 259 7.95e-42 147
MsG0680031009.01.T01 MTR_5g048850 30.000 320 211 7 17 329 22 335 8.20e-42 149
MsG0680031009.01.T01 MTR_0009s0480 31.090 312 204 6 17 322 21 327 8.45e-42 149
MsG0680031009.01.T01 MTR_2g033270 34.899 298 169 10 42 327 19 303 1.11e-41 148
MsG0680031009.01.T01 MTR_1g032250 32.628 331 186 11 18 329 47 359 1.72e-41 149
MsG0680031009.01.T01 MTR_1g081840 30.909 330 200 8 11 322 25 344 2.96e-41 148
MsG0680031009.01.T01 MTR_4g123020 33.663 303 168 11 42 327 20 306 4.76e-41 146
MsG0680031009.01.T01 MTR_1g062110 34.231 260 153 6 19 263 38 294 1.50e-40 145
MsG0680031009.01.T01 MTR_1g032140 34.154 325 189 11 18 329 40 352 2.47e-40 145
MsG0680031009.01.T01 MTR_3g026150 34.247 219 138 3 113 329 31 245 6.74e-40 141
MsG0680031009.01.T01 MTR_7g056353 34.831 267 154 6 74 330 79 335 8.88e-40 147
MsG0680031009.01.T01 MTR_8g074070 30.976 297 168 8 30 315 40 310 1.18e-39 143
MsG0680031009.01.T01 MTR_8g461330 32.258 310 180 9 36 327 21 318 1.22e-39 143
MsG0680031009.01.T01 MTR_1g033810 31.962 316 199 8 17 322 21 330 1.29e-39 143
MsG0680031009.01.T01 MTR_4g074130 31.481 324 186 10 25 333 23 325 1.48e-39 143
MsG0680031009.01.T01 MTR_8g041600 34.363 259 149 9 17 263 42 291 1.71e-39 142
MsG0680031009.01.T01 MTR_2g019370 30.094 319 201 9 22 328 11 319 3.06e-39 142
MsG0680031009.01.T01 MTR_0009s0050 32.489 237 149 5 97 329 8 237 3.42e-39 139
MsG0680031009.01.T01 MTR_0009s0050 32.489 237 149 5 97 329 8 237 3.53e-39 139
MsG0680031009.01.T01 MTR_8g009150 30.000 320 179 10 27 330 43 333 7.82e-39 141
MsG0680031009.01.T01 MTR_8g009080 36.287 237 131 8 33 262 91 314 1.24e-38 140
MsG0680031009.01.T01 MTR_8g009120 31.132 318 186 9 27 330 43 341 2.79e-38 139
MsG0680031009.01.T01 MTR_7g451860 32.903 310 167 9 42 333 41 327 3.62e-38 139
MsG0680031009.01.T01 MTR_7g047670 32.903 310 167 9 42 333 41 327 3.62e-38 139
MsG0680031009.01.T01 MTR_5g005570 32.258 310 166 9 42 333 37 320 4.26e-38 139
MsG0680031009.01.T01 MTR_2g437380 37.158 183 113 2 146 326 64 246 4.89e-38 137
MsG0680031009.01.T01 MTR_5g055800 29.677 310 206 7 19 322 24 327 7.84e-38 138
MsG0680031009.01.T01 MTR_2g102570 28.618 304 199 8 38 330 48 344 9.70e-38 139
MsG0680031009.01.T01 MTR_7g045650 33.195 241 148 7 42 275 60 294 1.50e-37 137
MsG0680031009.01.T01 MTR_3g040410 31.633 294 180 8 42 324 6 289 2.11e-37 136
MsG0680031009.01.T01 MTR_8g009170 34.310 239 141 7 33 262 51 282 2.27e-37 135
MsG0680031009.01.T01 MTR_8g009080 36.052 233 129 8 33 258 91 310 3.10e-37 136
MsG0680031009.01.T01 MTR_2g025120 34.199 231 136 6 40 263 2 223 1.67e-36 131
MsG0680031009.01.T01 MTR_2g070870 31.988 322 186 13 21 327 7 310 2.54e-36 134
MsG0680031009.01.T01 MTR_3g088745 29.204 339 199 10 15 327 12 335 3.04e-36 134
MsG0680031009.01.T01 MTR_2g083000 30.795 302 169 10 40 325 31 308 3.09e-36 134
MsG0680031009.01.T01 MTR_5g011250 29.023 348 220 11 1 324 1 345 4.58e-36 134
MsG0680031009.01.T01 MTR_4g087130 30.154 325 203 9 19 322 4 325 1.53e-35 132
MsG0680031009.01.T01 MTR_1g011580 30.282 284 185 6 42 322 63 336 2.74e-35 132
MsG0680031009.01.T01 MTR_1g043810 35.135 259 142 8 17 262 29 274 6.05e-35 130
MsG0680031009.01.T01 MTR_1g043770 36.752 234 129 6 38 262 49 272 6.89e-35 129
MsG0680031009.01.T01 MTR_0056s0160 34.595 185 120 1 146 329 36 220 9.81e-35 127
MsG0680031009.01.T01 MTR_3g096500 29.043 303 193 9 43 327 67 365 1.14e-34 130
MsG0680031009.01.T01 MTR_3g043900 27.607 326 211 7 18 330 28 341 4.05e-34 129
MsG0680031009.01.T01 MTR_8g009180 38.378 185 107 4 150 329 99 281 5.67e-34 127
MsG0680031009.01.T01 MTR_0009s0050 41.538 130 76 0 200 329 26 155 1.05e-33 122
MsG0680031009.01.T01 MTR_3g045230 29.063 320 211 7 20 330 30 342 2.43e-33 126
MsG0680031009.01.T01 MTR_8g093930 27.632 304 197 9 35 322 40 336 1.33e-32 125
MsG0680031009.01.T01 MTR_2g068800 32.103 271 150 7 17 277 31 277 1.48e-32 122
MsG0680031009.01.T01 MTR_1g043775 36.555 238 125 8 38 262 50 274 2.51e-32 122
MsG0680031009.01.T01 MTR_4g115990 31.298 262 157 4 73 330 76 318 3.19e-32 123
MsG0680031009.01.T01 MTR_7g102720 29.966 297 198 6 38 330 33 323 4.24e-31 120
MsG0680031009.01.T01 MTR_3g083370 32.743 226 139 6 42 263 7 223 5.01e-31 117
MsG0680031009.01.T01 MTR_0009s0400 42.520 127 73 0 200 326 2 128 6.38e-31 114
MsG0680031009.01.T01 MTR_5g055690 30.213 235 154 5 35 263 40 270 7.90e-31 118
MsG0680031009.01.T01 MTR_2g072910 32.046 259 161 8 17 266 26 278 1.80e-30 117
MsG0680031009.01.T01 MTR_3g026150 29.758 289 170 9 1 263 1 282 4.68e-30 116
MsG0680031009.01.T01 MTR_1g043840 40.805 174 94 3 157 322 51 223 7.29e-30 117
MsG0680031009.01.T01 MTR_5g048850 30.588 255 164 7 17 264 22 270 3.64e-29 114
MsG0680031009.01.T01 MTR_0009s0480 29.644 253 167 6 17 263 21 268 3.97e-29 113
MsG0680031009.01.T01 MTR_2g083030 27.303 304 180 9 39 325 34 313 4.36e-29 114
MsG0680031009.01.T01 MTR_7g078010 35.081 248 123 9 35 263 60 288 8.82e-29 113
MsG0680031009.01.T01 MTR_6g092620 27.157 313 193 10 41 336 2 296 3.48e-28 111
MsG0680031009.01.T01 MTR_8g093980 29.607 331 196 14 18 325 37 353 6.56e-28 112
MsG0680031009.01.T01 MTR_3g464530 26.490 302 187 7 35 325 27 304 7.17e-28 111
MsG0680031009.01.T01 MTR_4g096840 27.097 310 205 10 29 327 19 318 1.70e-27 110
MsG0680031009.01.T01 MTR_6g088665 30.519 308 181 10 34 314 12 313 9.88e-26 105
MsG0680031009.01.T01 MTR_6g088665 30.619 307 181 10 34 314 12 312 4.71e-25 103
MsG0680031009.01.T01 MTR_4g132770 38.760 129 75 2 201 326 31 158 7.61e-24 96.3
MsG0680031009.01.T01 MTR_4g011690 28.522 291 188 9 58 339 32 311 1.26e-23 99.4
MsG0680031009.01.T01 MTR_8g102600 27.500 320 200 12 32 326 2 314 2.02e-23 99.0
MsG0680031009.01.T01 MTR_7g090520 29.514 288 184 9 39 315 7 286 2.17e-23 99.0
MsG0680031009.01.T01 MTR_4g011720 28.102 274 189 6 58 329 32 299 1.37e-22 96.7
MsG0680031009.01.T01 MTR_7g077670 27.740 292 188 8 36 315 5 285 1.48e-22 96.7
MsG0680031009.01.T01 MTR_7g016100 57.333 75 32 0 263 337 6 80 5.23e-22 89.0
MsG0680031009.01.T01 MTR_4g021380 30.657 274 173 9 58 322 33 298 2.39e-21 93.2
MsG0680031009.01.T01 MTR_4g100600 27.329 322 208 12 38 339 5 320 7.05e-21 92.0
MsG0680031009.01.T01 MTR_5g025050 25.606 289 199 7 39 323 2 278 9.86e-21 91.3
MsG0680031009.01.T01 MTR_8g030880 27.431 288 181 8 42 314 10 284 5.54e-20 89.4
MsG0680031009.01.T01 MTR_5g027230 23.975 317 207 6 38 338 2 300 8.27e-20 88.6
MsG0680031009.01.T01 MTR_3g464530 26.250 240 152 6 35 263 27 252 2.42e-19 86.3
MsG0680031009.01.T01 MTR_5g025090 25.517 290 198 6 40 324 3 279 2.78e-19 87.0
MsG0680031009.01.T01 MTR_3g108520 27.306 271 185 6 58 322 33 297 7.33e-19 86.3
MsG0680031009.01.T01 MTR_4g100590 26.027 292 185 8 41 314 8 286 7.70e-19 85.9
MsG0680031009.01.T01 MTR_1g027290 27.331 311 187 12 38 324 25 320 1.61e-18 85.5
MsG0680031009.01.T01 MTR_5g025060 24.232 293 175 9 38 323 2 254 7.74e-18 82.8
MsG0680031009.01.T01 MTR_5g024940 23.762 303 202 7 38 339 2 276 9.88e-18 82.4
MsG0680031009.01.T01 MTR_4g021360 30.601 183 119 5 146 322 115 295 8.66e-16 77.4
MsG0680031009.01.T01 MTR_1g032240 40.000 105 52 3 191 294 53 147 1.52e-15 73.9
MsG0680031009.01.T01 MTR_6g035160 35.119 168 98 6 165 326 1 163 1.32e-14 71.6
MsG0680031009.01.T01 MTR_7g056370 31.210 157 90 6 35 182 39 186 7.21e-14 70.5
MsG0680031009.01.T01 MTR_1g011600 31.214 173 114 4 146 314 121 292 2.51e-13 70.1
MsG0680031009.01.T01 MTR_3g040440 42.857 70 39 1 211 280 14 82 1.05e-12 67.8
MsG0680031009.01.T01 MTR_4g094900 26.042 192 132 3 55 237 34 224 8.75e-12 64.7
MsG0680031009.01.T01 MTR_4g011720 27.039 233 151 8 58 277 32 258 1.26e-11 64.7
MsG0680031009.01.T01 MTR_4g100600 27.230 213 141 7 38 240 5 213 5.50e-11 62.0
MsG0680031009.01.T01 MTR_7g060910 40.299 67 40 0 273 339 127 193 7.13e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031009.01.T01 AT5G24530 38.235 340 203 4 4 339 1 337 1.54e-79 246
MsG0680031009.01.T01 AT4G10500 37.615 327 195 6 19 339 20 343 1.22e-70 224
MsG0680031009.01.T01 AT4G10490 35.588 340 207 7 8 339 7 342 1.36e-65 211
MsG0680031009.01.T01 AT5G05600 37.389 337 191 7 17 339 36 366 1.81e-63 206
MsG0680031009.01.T01 AT2G38240 37.888 322 189 6 18 331 22 340 3.69e-63 204
MsG0680031009.01.T01 AT1G06620 36.858 331 179 10 17 330 36 353 1.76e-59 196
MsG0680031009.01.T01 AT3G55970 35.484 341 200 8 9 332 14 351 2.52e-58 192
MsG0680031009.01.T01 AT4G16330 37.134 307 178 7 39 339 64 361 5.91e-57 189
MsG0680031009.01.T01 AT5G08640 35.380 342 202 8 1 331 1 334 8.70e-57 187
MsG0680031009.01.T01 AT5G08640 35.380 342 202 8 1 331 1 334 8.70e-57 187
MsG0680031009.01.T01 AT3G11180 35.152 330 194 7 17 332 65 388 1.84e-55 186
MsG0680031009.01.T01 AT5G59540 36.093 302 172 7 42 330 61 354 7.93e-55 183
MsG0680031009.01.T01 AT2G36690 34.524 336 202 7 17 339 30 360 8.55e-55 183
MsG0680031009.01.T01 AT2G36690 34.524 336 202 7 17 339 30 360 8.55e-55 183
MsG0680031009.01.T01 AT5G59530 33.636 330 193 9 17 330 33 352 1.34e-54 183
MsG0680031009.01.T01 AT1G06640 36.601 306 169 9 40 330 62 357 2.09e-54 182
MsG0680031009.01.T01 AT1G03400 35.762 302 172 9 37 329 51 339 2.14e-54 182
MsG0680031009.01.T01 AT3G11180 35.514 321 187 7 17 323 65 379 2.29e-54 183
MsG0680031009.01.T01 AT1G06645 35.197 304 173 8 40 330 75 367 4.18e-54 182
MsG0680031009.01.T01 AT1G03410 35.691 311 173 11 33 326 46 346 2.69e-53 179
MsG0680031009.01.T01 AT1G06650 34.983 303 178 8 40 330 62 357 4.81e-53 179
MsG0680031009.01.T01 AT1G03410 35.691 311 173 11 33 326 83 383 6.58e-53 179
MsG0680031009.01.T01 AT3G19000 36.890 328 174 10 22 322 7 328 6.71e-53 178
MsG0680031009.01.T01 AT3G19010 35.312 320 187 9 21 322 6 323 7.53e-53 178
MsG0680031009.01.T01 AT3G19010 35.312 320 187 9 21 322 6 323 7.53e-53 178
MsG0680031009.01.T01 AT2G44800 33.333 333 207 7 1 322 6 334 3.52e-52 176
MsG0680031009.01.T01 AT2G30830 37.143 315 169 11 34 330 43 346 4.36e-52 176
MsG0680031009.01.T01 AT3G51240 33.019 318 199 7 17 325 13 325 6.33e-52 176
MsG0680031009.01.T01 AT5G43440 36.242 298 161 10 41 322 61 345 1.48e-51 175
MsG0680031009.01.T01 AT5G43450 35.570 298 169 8 41 326 60 346 2.13e-50 172
MsG0680031009.01.T01 AT1G04380 33.846 325 192 10 17 330 21 333 2.51e-50 171
MsG0680031009.01.T01 AT1G04350 33.770 305 174 10 41 330 57 348 5.59e-49 168
MsG0680031009.01.T01 AT3G60290 34.615 312 192 7 19 322 27 334 1.15e-48 167
MsG0680031009.01.T01 AT3G21420 34.125 337 190 12 6 322 18 342 1.40e-48 167
MsG0680031009.01.T01 AT1G03400 33.333 330 170 11 37 329 51 367 2.14e-48 167
MsG0680031009.01.T01 AT5G63600 32.268 313 197 6 14 322 8 309 2.52e-48 165
MsG0680031009.01.T01 AT5G07480 31.447 318 196 8 19 322 24 333 2.68e-48 166
MsG0680031009.01.T01 AT4G16330 40.254 236 122 6 116 339 27 255 7.00e-48 162
MsG0680031009.01.T01 AT2G30840 34.286 315 190 9 34 337 49 357 1.03e-47 165
MsG0680031009.01.T01 AT1G78550 32.399 321 201 8 17 327 27 341 1.80e-47 164
MsG0680031009.01.T01 AT5G63600 32.166 314 197 7 14 322 8 310 2.48e-47 163
MsG0680031009.01.T01 AT3G61400 33.981 309 175 9 41 329 59 358 2.71e-47 164
MsG0680031009.01.T01 AT2G25450 35.034 294 174 8 36 318 49 336 6.93e-47 162
MsG0680031009.01.T01 AT1G77330 31.833 311 183 7 41 333 2 301 1.07e-46 160
MsG0680031009.01.T01 AT5G51810 32.110 327 203 10 14 327 37 357 1.60e-46 162
MsG0680031009.01.T01 AT1G55290 31.677 322 201 7 19 330 37 349 4.18e-46 160
MsG0680031009.01.T01 AT5G63590 32.646 291 189 5 38 323 10 298 4.36e-46 159
MsG0680031009.01.T01 AT3G12900 33.333 318 202 6 17 329 31 343 2.04e-45 159
MsG0680031009.01.T01 AT3G13610 30.745 322 205 7 18 330 37 349 4.87e-45 157
MsG0680031009.01.T01 AT3G19010 32.915 319 166 9 21 322 6 293 4.93e-45 156
MsG0680031009.01.T01 AT1G17020 29.231 325 212 8 17 329 27 345 1.01e-44 157
MsG0680031009.01.T01 AT5G05600 37.308 260 145 6 17 263 36 290 1.97e-44 154
MsG0680031009.01.T01 AT4G25310 32.288 319 195 8 15 322 25 333 2.26e-44 155
MsG0680031009.01.T01 AT1G06620 37.692 260 135 9 17 262 36 282 2.59e-44 154
MsG0680031009.01.T01 AT1G49390 31.373 306 197 7 42 337 45 347 3.07e-44 155
MsG0680031009.01.T01 AT4G25420 32.931 331 199 9 14 327 35 359 3.77e-44 155
MsG0680031009.01.T01 AT1G05010 35.185 270 161 6 42 306 7 267 6.45e-44 154
MsG0680031009.01.T01 AT1G12010 32.353 306 185 8 41 336 9 302 1.11e-43 153
MsG0680031009.01.T01 AT1G78440 31.000 300 185 9 42 328 18 308 3.00e-43 152
MsG0680031009.01.T01 AT2G30840 33.651 315 186 10 34 337 49 351 3.09e-43 153
MsG0680031009.01.T01 AT4G21200 34.021 291 159 8 44 325 50 316 4.11e-43 152
MsG0680031009.01.T01 AT5G20400 30.625 320 208 8 28 337 32 347 4.36e-43 152
MsG0680031009.01.T01 AT4G25300 30.462 325 207 8 17 329 26 343 5.22e-43 152
MsG0680031009.01.T01 AT5G07200 32.530 332 193 9 19 327 37 360 1.02e-42 152
MsG0680031009.01.T01 AT1G62380 31.894 301 185 6 42 333 10 299 1.45e-42 150
MsG0680031009.01.T01 AT1G78550 33.585 265 165 6 68 327 5 263 2.56e-42 148
MsG0680031009.01.T01 AT3G55970 36.029 272 154 8 9 263 14 282 1.59e-41 147
MsG0680031009.01.T01 AT1G49390 31.734 271 177 6 72 337 1 268 1.86e-41 145
MsG0680031009.01.T01 AT1G06640 37.607 234 125 7 40 262 62 285 1.93e-40 144
MsG0680031009.01.T01 AT5G20550 30.565 301 196 7 42 332 45 342 6.08e-40 144
MsG0680031009.01.T01 AT1G60980 31.707 328 198 8 19 327 36 356 7.39e-40 144
MsG0680031009.01.T01 AT1G15550 29.932 294 192 7 38 324 53 339 1.13e-39 143
MsG0680031009.01.T01 AT5G63595 30.909 275 166 6 26 299 11 262 1.18e-39 141
MsG0680031009.01.T01 AT3G19000 34.909 275 146 10 22 269 7 275 2.32e-39 140
MsG0680031009.01.T01 AT3G51240 33.607 244 153 6 86 325 3 241 3.41e-39 140
MsG0680031009.01.T01 AT5G43440 36.752 234 124 8 41 262 61 282 3.88e-39 140
MsG0680031009.01.T01 AT1G06640 37.391 230 123 7 40 258 62 281 4.08e-39 140
MsG0680031009.01.T01 AT1G17010 28.528 326 213 8 17 329 27 345 5.07e-39 142
MsG0680031009.01.T01 AT5G63580 38.723 235 134 6 30 258 5 235 1.11e-38 137
MsG0680031009.01.T01 AT5G63580 38.723 235 134 6 30 258 5 235 1.40e-38 137
MsG0680031009.01.T01 AT2G34555 32.288 319 192 11 20 327 7 312 1.94e-38 139
MsG0680031009.01.T01 AT1G06650 34.483 232 137 6 40 263 62 286 6.78e-38 137
MsG0680031009.01.T01 AT1G80330 29.787 329 206 10 18 328 18 339 1.92e-37 137
MsG0680031009.01.T01 AT5G54000 30.872 298 187 6 42 328 46 335 2.78e-37 137
MsG0680031009.01.T01 AT5G43450 35.931 231 128 7 41 262 60 279 2.99e-37 135
MsG0680031009.01.T01 AT1G47990 31.392 309 174 12 40 327 13 304 8.06e-37 135
MsG0680031009.01.T01 AT1G80340 30.508 295 191 7 35 322 43 330 1.81e-36 135
MsG0680031009.01.T01 AT5G51810 33.460 263 159 9 14 266 37 293 2.36e-36 133
MsG0680031009.01.T01 AT2G19590 30.820 305 187 9 42 336 11 301 4.60e-36 132
MsG0680031009.01.T01 AT1G44090 29.721 323 205 11 31 336 50 367 1.09e-35 133
MsG0680031009.01.T01 AT5G59540 33.898 236 138 6 38 263 57 284 2.72e-35 130
MsG0680031009.01.T01 AT4G22880 27.640 322 213 8 18 321 17 336 3.19e-35 132
MsG0680031009.01.T01 AT4G22880 27.640 322 213 8 18 321 17 336 3.19e-35 132
MsG0680031009.01.T01 AT4G22880 27.640 322 213 8 18 321 17 336 3.19e-35 132
MsG0680031009.01.T01 AT3G19010 31.834 289 177 9 21 291 6 292 5.15e-35 129
MsG0680031009.01.T01 AT1G04380 33.725 255 149 9 17 263 21 263 6.95e-35 129
MsG0680031009.01.T01 AT5G54000 31.559 263 166 5 72 328 1 255 6.98e-35 129
MsG0680031009.01.T01 AT1G30040 28.859 298 197 8 38 327 27 317 7.59e-35 130
MsG0680031009.01.T01 AT2G30840 34.310 239 139 7 34 262 49 279 9.14e-35 129
MsG0680031009.01.T01 AT5G07480 31.944 216 137 3 115 322 11 224 2.76e-34 126
MsG0680031009.01.T01 AT1G02400 28.662 314 205 9 26 327 8 314 3.51e-34 128
MsG0680031009.01.T01 AT3G61400 34.310 239 132 7 41 263 59 288 4.82e-34 127
MsG0680031009.01.T01 AT5G43935 29.655 290 175 8 39 322 16 282 3.82e-33 124
MsG0680031009.01.T01 AT4G25300 37.222 180 107 2 154 329 72 249 9.93e-33 122
MsG0680031009.01.T01 AT5G12270 28.395 324 213 7 17 329 31 346 7.90e-32 122
MsG0680031009.01.T01 AT2G19590 30.909 275 169 8 69 336 26 286 2.45e-31 120
MsG0680031009.01.T01 AT4G25310 29.206 315 182 8 15 322 25 305 1.52e-30 118
MsG0680031009.01.T01 AT4G25420 32.824 262 156 8 11 258 32 287 2.19e-30 117
MsG0680031009.01.T01 AT1G50960 28.808 302 173 10 42 325 40 317 8.46e-30 116
MsG0680031009.01.T01 AT3G50210 28.832 274 164 6 53 303 32 297 2.97e-29 115
MsG0680031009.01.T01 AT3G50210 28.832 274 164 6 53 303 32 297 2.97e-29 115
MsG0680031009.01.T01 AT3G50210 28.832 274 164 6 53 303 32 297 2.97e-29 115
MsG0680031009.01.T01 AT1G14130 29.605 304 179 8 42 328 9 294 3.06e-29 114
MsG0680031009.01.T01 AT4G21690 28.188 298 193 7 38 322 43 332 6.11e-28 112
MsG0680031009.01.T01 AT3G49620 28.030 264 170 7 55 303 60 318 9.72e-27 108
MsG0680031009.01.T01 AT1G14120 28.136 295 184 5 41 324 7 284 9.83e-27 108
MsG0680031009.01.T01 AT1G14120 28.136 295 184 5 41 324 7 284 9.83e-27 108
MsG0680031009.01.T01 AT1G14120 28.136 295 184 5 41 324 7 284 9.83e-27 108
MsG0680031009.01.T01 AT3G49630 26.667 285 191 7 53 321 29 311 1.39e-26 107
MsG0680031009.01.T01 AT3G49630 26.667 285 191 7 53 321 33 315 1.44e-26 107
MsG0680031009.01.T01 AT3G46500 27.097 310 207 9 33 327 8 313 2.54e-24 101
MsG0680031009.01.T01 AT4G23340 29.470 302 184 10 38 324 6 293 1.55e-22 96.7
MsG0680031009.01.T01 AT1G52820 26.644 289 201 7 55 339 32 313 2.55e-22 95.9
MsG0680031009.01.T01 AT3G46490 26.984 315 208 8 33 327 8 320 2.80e-22 95.9
MsG0680031009.01.T01 AT4G03070 28.115 313 193 9 42 335 14 313 9.64e-22 94.4
MsG0680031009.01.T01 AT3G49630 30.220 182 119 4 147 321 62 242 2.71e-21 92.0
MsG0680031009.01.T01 AT1G30040 28.205 234 153 8 38 263 27 253 3.38e-21 92.0
MsG0680031009.01.T01 AT3G50210 31.707 164 105 3 147 303 52 215 4.89e-21 91.3
MsG0680031009.01.T01 AT1G35190 28.956 297 167 11 35 300 5 288 8.76e-20 89.0
MsG0680031009.01.T01 AT1G02400 26.136 264 179 7 26 279 8 265 1.05e-19 87.8
MsG0680031009.01.T01 AT3G46500 27.174 276 182 9 33 293 8 279 1.70e-18 84.7
MsG0680031009.01.T01 AT1G35190 28.912 294 148 12 35 300 5 265 2.98e-18 84.3
MsG0680031009.01.T01 AT2G06960 37.226 137 71 4 196 332 27 148 9.84e-18 79.3
MsG0680031009.01.T01 AT3G47190 25.507 345 184 14 16 325 4 310 1.20e-17 82.8
MsG0680031009.01.T01 AT1G28030 28.520 277 178 7 58 324 36 302 7.18e-17 80.5
MsG0680031009.01.T01 AT5G58660 27.302 315 183 16 14 293 2 305 3.99e-16 79.0
MsG0680031009.01.T01 AT4G23340 36.641 131 78 3 198 324 46 175 5.45e-16 76.3
MsG0680031009.01.T01 AT1G52800 25.670 261 176 6 61 315 37 285 1.93e-15 76.3
MsG0680031009.01.T01 AT1G80320 26.515 264 175 9 59 314 33 285 2.33e-15 76.3
MsG0680031009.01.T01 AT4G16765 28.497 193 124 7 147 327 50 240 6.05e-13 68.2
MsG0680031009.01.T01 AT4G16765 28.497 193 124 7 147 327 50 240 6.05e-13 68.2
MsG0680031009.01.T01 AT4G16765 28.497 193 124 7 147 327 50 240 6.05e-13 68.2
MsG0680031009.01.T01 AT4G03050 33.784 148 91 4 174 319 240 382 7.31e-13 69.3
MsG0680031009.01.T01 AT4G03050 33.784 148 91 4 174 319 240 382 7.31e-13 69.3
MsG0680031009.01.T01 AT4G16765 30.000 180 112 7 147 314 50 227 1.30e-12 67.0
MsG0680031009.01.T01 AT1G52790 26.282 312 202 12 39 334 2 301 4.35e-12 66.6

Find 94 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATTGGGACATGAAATTT+TGG 0.132305 6:-12814712 MsG0680031009.01.T01:CDS
TGGAATTTCCAAGGATTTAA+TGG 0.174491 6:-12817079 MsG0680031009.01.T01:CDS
CTGGAGAATTCATGGAGTTT+TGG 0.201882 6:-12816882 MsG0680031009.01.T01:CDS
TACACAAGAACTGAACAAAT+TGG 0.234028 6:-12814727 MsG0680031009.01.T01:CDS
AATGACATGGATTTATATAT+TGG 0.234856 6:+12813953 None:intergenic
AATATTGAACAGCATCTATT+TGG 0.241718 6:+12816938 None:intergenic
AATTTAATTTACCGGTATTT+AGG 0.254054 6:+12816847 None:intergenic
TTGAAAGCTTCTGAAGAATA+TGG 0.255261 6:-12817918 MsG0680031009.01.T01:CDS
AGTTCCCCAATGAAATATTC+TGG 0.292700 6:+12814660 None:intergenic
AGCTTTCAAAATTTGCATTA+TGG 0.297714 6:+12817932 None:intergenic
TAACATTGGTTTAATCTTGC+AGG 0.303741 6:-12814445 MsG0680031009.01.T01:intron
GAGATGCTTTGTGAAGGGTT+AGG 0.321761 6:-12814690 MsG0680031009.01.T01:CDS
TGCAACACCTGTTCAATCTT+AGG 0.324493 6:+12813896 None:intergenic
CCCAAAGTTAAACTTGGTTC+AGG 0.330984 6:+12814594 None:intergenic
CCCTGAACCAAGTTTAACTT+TGG 0.331229 6:-12814595 MsG0680031009.01.T01:CDS
ATCTTACAATTAATTCCATT+TGG 0.333885 6:+12816982 None:intergenic
AAATAGATGCTGTTCAATAT+TGG 0.342734 6:-12816936 MsG0680031009.01.T01:CDS
ACAATACCCTTGATTGATCT+TGG 0.351764 6:-12817975 MsG0680031009.01.T01:CDS
ACAACAAAAGCATTGGGAAT+AGG 0.358351 6:+12814468 None:intergenic
CTTAAACCAGAATATTTCAT+TGG 0.358356 6:-12814666 MsG0680031009.01.T01:CDS
TCCTCCCTCTGGAGAATTCA+TGG 0.359193 6:-12816890 MsG0680031009.01.T01:CDS
CGTAAGAAGTTCTATGATAA+GGG 0.362739 6:-12813920 MsG0680031009.01.T01:CDS
AGATGCTTTGTGAAGGGTTA+GGG 0.374979 6:-12814689 MsG0680031009.01.T01:CDS
GATTGTAGGGTCTCTATGTT+TGG 0.376378 6:+12814566 None:intergenic
TCGTAAGAAGTTCTATGATA+AGG 0.382043 6:-12813921 MsG0680031009.01.T01:CDS
GGCTTCATCCATTAAATCCT+TGG 0.384348 6:+12817071 None:intergenic
ACATGGCCTTCAAGTTCTTA+AGG 0.384394 6:-12814514 MsG0680031009.01.T01:CDS
CCATCTACCAATTCTTCTGC+AGG 0.387277 6:+12813986 None:intergenic
GATAGAACCTGCAGAAGAAT+TGG 0.394684 6:-12813993 MsG0680031009.01.T01:CDS
ATATATAAATCCATGTCATT+TGG 0.395435 6:-12813950 MsG0680031009.01.T01:CDS
TTAAACCAGAATATTTCATT+GGG 0.396031 6:-12814665 MsG0680031009.01.T01:CDS
GAACTCTTTGAAAATATTGA+AGG 0.401853 6:+12817050 None:intergenic
TTCTTCTTCAGTGAGGTTGT+TGG 0.414722 6:-12814756 MsG0680031009.01.T01:intron
AAGGGTATTGTCTTACTTGA+AGG 0.414793 6:+12817987 None:intergenic
TCTATCATTCTTGAAAATGA+TGG 0.418610 6:+12814010 None:intergenic
ATATAATTTAAAACTATGTA+TGG 0.426658 6:-12813845 MsG0680031009.01.T01:three_prime_UTR
GCATTGGGAATAGGTTCAAC+TGG 0.426795 6:+12814477 None:intergenic
AGTAGAATAGTGATGATTGT+AGG 0.427210 6:+12814552 None:intergenic
CCTGAACCAAGTTTAACTTT+GGG 0.435899 6:-12814594 MsG0680031009.01.T01:CDS
ATCACCAATGGAAGGCTTGT+TGG 0.436484 6:-12814097 MsG0680031009.01.T01:CDS
CATCATCCTTAAGAACTTGA+AGG 0.437394 6:+12814508 None:intergenic
GAAGGGGTTGTGACCTTACC+AGG 0.439200 6:+12818005 None:intergenic
CCTGCAGAAGAATTGGTAGA+TGG 0.439365 6:-12813986 MsG0680031009.01.T01:CDS
AAGTGATGAGCTAGTACTAC+TGG 0.454189 6:+12814627 None:intergenic
GACATGGATTTATATATTGG+AGG 0.474174 6:+12813956 None:intergenic
AAGTTCTTAAGGATGATGAA+TGG 0.475543 6:-12814503 MsG0680031009.01.T01:CDS
ACACAAGAACTGAACAAATT+GGG 0.478375 6:-12814726 MsG0680031009.01.T01:CDS
GCTAGACCCAAAGTTAAACT+TGG 0.481690 6:+12814588 None:intergenic
AATGTTAACAACAAAAGCAT+TGG 0.484105 6:+12814461 None:intergenic
GTTAAACTTGGTTCAGGGCA+AGG 0.489008 6:+12814600 None:intergenic
ATGTCCTCCAAGATCAATCA+AGG 0.496046 6:+12817968 None:intergenic
AGCACCAACAAGCCTTCCAT+TGG 0.501472 6:+12814093 None:intergenic
TAAGGGTCCTAAGATTGAAC+AGG 0.503912 6:-12813903 MsG0680031009.01.T01:CDS
AGGGTATTGTCTTACTTGAA+GGG 0.505108 6:+12817988 None:intergenic
TTAAATCCTTGGAAATTCCA+TGG 0.508697 6:+12817082 None:intergenic
ATGTTAACAACAAAAGCATT+GGG 0.510320 6:+12814462 None:intergenic
CCAAAGTTAAACTTGGTTCA+GGG 0.516963 6:+12814595 None:intergenic
GTAGAATAGTGATGATTGTA+GGG 0.520687 6:+12814553 None:intergenic
ACACACCCTTGTCCTCCCTC+TGG 0.521134 6:-12816901 MsG0680031009.01.T01:CDS
GAATGCTCTAAAGATCCAAA+TGG 0.524250 6:-12816997 MsG0680031009.01.T01:CDS
AACAAAGGCTTATCTCAAGT+TGG 0.528594 6:-12818082 MsG0680031009.01.T01:CDS
TTTCCTTTGGAGTCATGGCA+TGG 0.528919 6:+12817028 None:intergenic
CGGTATTTAGGTGGTTTCTG+AGG 0.539734 6:+12816859 None:intergenic
AATTCTCCAGAGGGAGGACA+AGG 0.540964 6:+12816895 None:intergenic
CTCAGAAACCACCTAAATAC+CGG 0.542839 6:-12816858 MsG0680031009.01.T01:intron
CTTCAAGATCAAGAGGTACA+TGG 0.550565 6:-12814531 MsG0680031009.01.T01:CDS
CATAGGAGTTATGGAAACAA+TGG 0.551764 6:-12818105 None:intergenic
ACTAGAGTGTAGACCTGGTA+AGG 0.555383 6:-12818018 MsG0680031009.01.T01:CDS
GGGTATTGTCTTACTTGAAG+GGG 0.557929 6:+12817989 None:intergenic
GATCAACCATGGAATTTCCA+AGG 0.562614 6:-12817088 MsG0680031009.01.T01:CDS
ATACCCTTGATTGATCTTGG+AGG 0.563246 6:-12817972 MsG0680031009.01.T01:CDS
TTCAGATAATCACCAATGGA+AGG 0.573552 6:-12814105 MsG0680031009.01.T01:intron
ATGAAATAGGTGATCAACCA+TGG 0.576040 6:-12817099 MsG0680031009.01.T01:intron
ACGAAATTCTCCAAATGACA+TGG 0.578964 6:+12813940 None:intergenic
TTAATTTACCGGTATTTAGG+TGG 0.584318 6:+12816850 None:intergenic
TATTCTACTTCAAGATCAAG+AGG 0.586229 6:-12814538 MsG0680031009.01.T01:CDS
TCTAGTGGTTGCACAAAGGA+AGG 0.593745 6:+12818035 None:intergenic
AGATGCTGTTCAATATTGGA+AGG 0.600937 6:-12816932 MsG0680031009.01.T01:CDS
CAACCACTAGAGTGTAGACC+TGG 0.616612 6:-12818023 MsG0680031009.01.T01:CDS
AACTCCATGAATTCTCCAGA+GGG 0.617098 6:+12816886 None:intergenic
GTTCCATGCCATGACTCCAA+AGG 0.629573 6:-12817031 MsG0680031009.01.T01:CDS
TCATTTCAGATAATCACCAA+TGG 0.631009 6:-12814109 MsG0680031009.01.T01:intron
TAAACCAGAATATTTCATTG+GGG 0.634482 6:-12814664 MsG0680031009.01.T01:CDS
AGTGGTTGCACAAAGGAAGG+TGG 0.635317 6:+12818038 None:intergenic
TTATGGAAACAATGGAACAA+AGG 0.638230 6:-12818097 MsG0680031009.01.T01:CDS
TTACCAGGTCTACACTCTAG+TGG 0.640740 6:+12818020 None:intergenic
CACAAAGGAAGGTGGAACTG+AGG 0.656514 6:+12818046 None:intergenic
TCCATGAATTCTCCAGAGGG+AGG 0.667889 6:+12816889 None:intergenic
TGTCCTCCAAGATCAATCAA+GGG 0.676722 6:+12817969 None:intergenic
AAACTCCATGAATTCTCCAG+AGG 0.678023 6:+12816885 None:intergenic
ACACTCTAGTGGTTGCACAA+AGG 0.678631 6:+12818031 None:intergenic
AAACTTGGTTCAGGGCAAGG+AGG 0.682307 6:+12814603 None:intergenic
ACAACTGAGTTAAGCTCACG+AGG 0.707223 6:+12813746 None:intergenic
ATTCTCCAGAGGGAGGACAA+GGG 0.726732 6:+12816896 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAATGATTAAAAAAAT+AGG + Chr6:12815034-12815053 None:intergenic 10.0%
!!! AATCTAGTTTTTATTTTTTT+GGG + Chr6:12815523-12815542 None:intergenic 10.0%
!!! ATACATAGTTTTAAATTATA+TGG + Chr6:12818011-12818030 None:intergenic 10.0%
!!! ATATAATTTAAAACTATGTA+TGG - Chr6:12818010-12818029 MsG0680031009.01.T01:CDS 10.0%
!!! CAATTTCTTTTTTTTTTTTT+TGG - Chr6:12813981-12814000 MsG0680031009.01.T01:CDS 10.0%
!!! CTATTTTTTTAATCATTTTT+TGG - Chr6:12815032-12815051 MsG0680031009.01.T01:intron 10.0%
!!! TAATCTAGTTTTTATTTTTT+TGG + Chr6:12815524-12815543 None:intergenic 10.0%
!! AAAATATTCATAGATATTCA+TGG - Chr6:12814120-12814139 MsG0680031009.01.T01:intron 15.0%
!! AAATAAAAAATCAGAACAAA+GGG - Chr6:12818050-12818069 MsG0680031009.01.T01:CDS 15.0%
!! AATCAAATCAAAATAATTCA+TGG - Chr6:12814189-12814208 MsG0680031009.01.T01:intron 15.0%
!! AATCTAATAAACTATGAAAT+AGG - Chr6:12814743-12814762 MsG0680031009.01.T01:CDS 15.0%
!! TAAATAAAAAATCAGAACAA+AGG - Chr6:12818049-12818068 MsG0680031009.01.T01:CDS 15.0%
!! TATTTCATAGTTTATTAGAT+TGG + Chr6:12814744-12814763 None:intergenic 15.0%
!! TCAAATCAAAATTTGTATAA+TGG - Chr6:12814162-12814181 MsG0680031009.01.T01:intron 15.0%
!! TTAATGATTACTAATTAAGA+AGG - Chr6:12814074-12814093 MsG0680031009.01.T01:CDS 15.0%
!! TTACATATTATATACAGTAT+CGG + Chr6:12816175-12816194 None:intergenic 15.0%
!! TTATGTATTATTTATACGTT+TGG - Chr6:12815904-12815923 MsG0680031009.01.T01:intron 15.0%
!!! AAAATAGGAATTTAATTTAC+CGG + Chr6:12815019-12815038 None:intergenic 15.0%
!!! AAGTATTAGATTTTTTTTTG+TGG + Chr6:12815665-12815684 None:intergenic 15.0%
!!! ACTAGAAATATTTTTAGTTA+GGG + Chr6:12815749-12815768 None:intergenic 15.0%
!!! ATCTAGTTTTTATTTTTTTG+GGG + Chr6:12815522-12815541 None:intergenic 15.0%
!!! TAAGTTTTATAACGATATTA+GGG + Chr6:12816396-12816415 None:intergenic 15.0%
!!! TACTAGAAATATTTTTAGTT+AGG + Chr6:12815750-12815769 None:intergenic 15.0%
!!! TTATATGGTGAAAATATTTT+TGG + Chr6:12817996-12818015 None:intergenic 15.0%
!!! TTTGTTTCTTTATTAACTTA+TGG - Chr6:12814226-12814245 MsG0680031009.01.T01:intron 15.0%
!! AAAAATAAGTTAATCCAAAC+AGG + Chr6:12815846-12815865 None:intergenic 20.0%
!! AATAATATATGTAAGGTTTG+AGG - Chr6:12815624-12815643 MsG0680031009.01.T01:intron 20.0%
!! AATGACATGGATTTATATAT+TGG + Chr6:12817905-12817924 None:intergenic 20.0%
!! ATATATAAATCCATGTCATT+TGG - Chr6:12817905-12817924 MsG0680031009.01.T01:intron 20.0%
!! ATATTCGAAAAATATCCAAA+TGG + Chr6:12815067-12815086 None:intergenic 20.0%
!! ATATTGGTGAATTGATAAAA+AGG + Chr6:12814363-12814382 None:intergenic 20.0%
!! ATCTTACAATTAATTCCATT+TGG + Chr6:12814876-12814895 None:intergenic 20.0%
!! ATTAGGAAGTTTAATATGTT+GGG - Chr6:12815795-12815814 MsG0680031009.01.T01:intron 20.0%
!! ATTATTTATTTAAGTCGTTG+AGG - Chr6:12815089-12815108 MsG0680031009.01.T01:intron 20.0%
!! CAATTCACCAATATTAAAAA+CGG - Chr6:12814369-12814388 MsG0680031009.01.T01:intron 20.0%
!! CTTAATTAGTAATCATTAAG+AGG + Chr6:12814073-12814092 None:intergenic 20.0%
!! GACAATGAATAATATATGTA+AGG - Chr6:12815617-12815636 MsG0680031009.01.T01:intron 20.0%
!! TATTAGGAAGTTTAATATGT+TGG - Chr6:12815794-12815813 MsG0680031009.01.T01:intron 20.0%
!! TTAAACCAGAATATTTCATT+GGG - Chr6:12817190-12817209 MsG0680031009.01.T01:intron 20.0%
!! TTATTTATTTAAGTCGTTGA+GGG - Chr6:12815090-12815109 MsG0680031009.01.T01:intron 20.0%
!!! AAAAATTTGTCTTTTTAAGG+TGG - Chr6:12816122-12816141 MsG0680031009.01.T01:intron 20.0%
!!! AATTGTTTTTGTTTTTTGAG+AGG + Chr6:12815476-12815495 None:intergenic 20.0%
!!! AATTTAATTTACCGGTATTT+AGG + Chr6:12815011-12815030 None:intergenic 20.0%
!!! ATATTTCCTTTTTAAGCATT+AGG + Chr6:12816933-12816952 None:intergenic 20.0%
!!! GAAAATATTTTTGGATGATT+AGG + Chr6:12817987-12818006 None:intergenic 20.0%
!!! GCTAAAAATTTGTCTTTTTA+AGG - Chr6:12816119-12816138 MsG0680031009.01.T01:intron 20.0%
!!! GTAAGTTTTATAACGATATT+AGG + Chr6:12816397-12816416 None:intergenic 20.0%
!!! TATCTTCTCTCATTTTTATT+TGG - Chr6:12817453-12817472 MsG0680031009.01.T01:intron 20.0%
!!! TATTAGATTTTTTTTTGTGG+TGG + Chr6:12815662-12815681 None:intergenic 20.0%
!!! TCTTTTAAGATATTTGACTT+TGG + Chr6:12815337-12815356 None:intergenic 20.0%
!!! TGAATTGTTCAATTTTTCTT+CGG - Chr6:12815127-12815146 MsG0680031009.01.T01:intron 20.0%
! AAATAGATGCTGTTCAATAT+TGG - Chr6:12814919-12814938 MsG0680031009.01.T01:intron 25.0%
! AAGAATCCTAATGCTTAAAA+AGG - Chr6:12816924-12816943 MsG0680031009.01.T01:CDS 25.0%
! AATATTGAACAGCATCTATT+TGG + Chr6:12814920-12814939 None:intergenic 25.0%
! AGCTTTCAAAATTTGCATTA+TGG + Chr6:12813926-12813945 None:intergenic 25.0%
! CGTTATAAAACTTACACTAT+TGG - Chr6:12816402-12816421 MsG0680031009.01.T01:intron 25.0%
! CTAATACTTACTTAGCATAA+GGG - Chr6:12815676-12815695 MsG0680031009.01.T01:intron 25.0%
! CTCAAAATAAGTCTCTAATA+AGG + Chr6:12814334-12814353 None:intergenic 25.0%
! CTTAAACCAGAATATTTCAT+TGG - Chr6:12817189-12817208 MsG0680031009.01.T01:intron 25.0%
! GACAAGTAAACAAAACAAAA+TGG + Chr6:12814682-12814701 None:intergenic 25.0%
! TAAACCAGAATATTTCATTG+GGG - Chr6:12817191-12817210 MsG0680031009.01.T01:intron 25.0%
! TATTTATTTAAGTCGTTGAG+GGG - Chr6:12815091-12815110 MsG0680031009.01.T01:intron 25.0%
! TCTAATACTTACTTAGCATA+AGG - Chr6:12815675-12815694 MsG0680031009.01.T01:intron 25.0%
! TCTATCATTCTTGAAAATGA+TGG + Chr6:12817848-12817867 None:intergenic 25.0%
! TGGATTGATTGAAACTTATT+AGG - Chr6:12815778-12815797 MsG0680031009.01.T01:intron 25.0%
! TGTCAAATGTTAGAAATTAG+TGG + Chr6:12814488-12814507 None:intergenic 25.0%
! TTACTATTTACTCTTTCTTC+TGG + Chr6:12814456-12814475 None:intergenic 25.0%
! TTTCTTCTGGATTTGAATTT+AGG + Chr6:12814443-12814462 None:intergenic 25.0%
!! AATGTTAACAACAAAAGCAT+TGG + Chr6:12817397-12817416 None:intergenic 25.0%
!! ATGTAGCTTCTAAAAAATCA+CGG + Chr6:12816774-12816793 None:intergenic 25.0%
!! CATGCTTAAACAATGATTTT+AGG + Chr6:12814712-12814731 None:intergenic 25.0%
!! GAACTCTTTGAAAATATTGA+AGG + Chr6:12814808-12814827 None:intergenic 25.0%
!! GAGTTAAATTTGTTTACTTG+AGG + Chr6:12817075-12817094 None:intergenic 25.0%
!! TGGACATAAATATTTTGCAT+GGG - Chr6:12816999-12817018 MsG0680031009.01.T01:CDS 25.0%
!! TTGGACATAAATATTTTGCA+TGG - Chr6:12816998-12817017 MsG0680031009.01.T01:CDS 25.0%
!! TTTTGGACTAATATACCATT+TGG - Chr6:12815049-12815068 MsG0680031009.01.T01:intron 25.0%
!!! AATGCTTTTGTTGTTAACAT+TGG - Chr6:12817396-12817415 MsG0680031009.01.T01:intron 25.0%
!!! ATATTTCAACGTGTTTTTGA+AGG - Chr6:12817536-12817555 MsG0680031009.01.T01:intron 25.0%
!!! ATATTTCTAGTAAATGAAGC+TGG - Chr6:12815758-12815777 MsG0680031009.01.T01:intron 25.0%
!!! ATATTTGACTTTGGTTTTCT+TGG + Chr6:12815328-12815347 None:intergenic 25.0%
!!! ATGTTAACAACAAAAGCATT+GGG + Chr6:12817396-12817415 None:intergenic 25.0%
!!! TGAAGAATATGGTTTTTTTC+AGG - Chr6:12813948-12813967 MsG0680031009.01.T01:CDS 25.0%
AAGAAGAATATAGGTCTGTT+TGG + Chr6:12816047-12816066 None:intergenic 30.0%
AAGTTCTTAAGGATGATGAA+TGG - Chr6:12817352-12817371 MsG0680031009.01.T01:intron 30.0%
ACACAAGAACTGAACAAATT+GGG - Chr6:12817129-12817148 MsG0680031009.01.T01:intron 30.0%
ACTATGGAAAACTTTAGTCT+AGG + Chr6:12816583-12816602 None:intergenic 30.0%
AGTAGAATAGTGATGATTGT+AGG + Chr6:12817306-12817325 None:intergenic 30.0%
ATCATCGCATAAGTTATTGA+GGG - Chr6:12815269-12815288 MsG0680031009.01.T01:intron 30.0%
CATTATGTCTTAACTCAGTT+GGG + Chr6:12814410-12814429 None:intergenic 30.0%
CGTAAGAAGTTCTATGATAA+GGG - Chr6:12817935-12817954 MsG0680031009.01.T01:CDS 30.0%
CTATGGAAAACTTTAGTCTA+GGG + Chr6:12816582-12816601 None:intergenic 30.0%
GAATTGGAATTAAGAACTGA+TGG + Chr6:12816302-12816321 None:intergenic 30.0%
GACATGGATTTATATATTGG+AGG + Chr6:12817902-12817921 None:intergenic 30.0%
GTAGAATAGTGATGATTGTA+GGG + Chr6:12817305-12817324 None:intergenic 30.0%
TACACAAGAACTGAACAAAT+TGG - Chr6:12817128-12817147 MsG0680031009.01.T01:intron 30.0%
TATATCACTAAGAACTCGTT+TGG + Chr6:12816861-12816880 None:intergenic 30.0%
TATTCTACTTCAAGATCAAG+AGG - Chr6:12817317-12817336 MsG0680031009.01.T01:intron 30.0%
TCAACTATAGATCGTAGAAT+TGG - Chr6:12815495-12815514 MsG0680031009.01.T01:intron 30.0%
TCATTATGTCTTAACTCAGT+TGG + Chr6:12814411-12814430 None:intergenic 30.0%
TCGTAAGAAGTTCTATGATA+AGG - Chr6:12817934-12817953 MsG0680031009.01.T01:CDS 30.0%
TCTTCATAATCTTGAATGCT+GGG + Chr6:12814304-12814323 None:intergenic 30.0%
TGGAATTTCCAAGGATTTAA+TGG - Chr6:12814776-12814795 MsG0680031009.01.T01:intron 30.0%
TGTTTACTTGAGGTGAAATT+TGG + Chr6:12817065-12817084 None:intergenic 30.0%
TTAAATCCTTGGAAATTCCA+TGG + Chr6:12814776-12814795 None:intergenic 30.0%
TTAATTTACCGGTATTTAGG+TGG + Chr6:12815008-12815027 None:intergenic 30.0%
TTAGCTTAACTCAGTTGTTA+TGG - Chr6:12815595-12815614 MsG0680031009.01.T01:intron 30.0%
TTATGTCCAAAACTAGTCAA+AGG + Chr6:12816988-12817007 None:intergenic 30.0%
TTCTTCATAATCTTGAATGC+TGG + Chr6:12814305-12814324 None:intergenic 30.0%
TTGACATTCAAAAGATGCTT+AGG - Chr6:12814502-12814521 MsG0680031009.01.T01:CDS 30.0%
TTTGATCTCTTTGACTATTG+AGG + Chr6:12814639-12814658 None:intergenic 30.0%
! AAGAGATCATCTTTTTATCG+TGG - Chr6:12814544-12814563 MsG0680031009.01.T01:CDS 30.0%
! CAAATTGGGACATGAAATTT+TGG - Chr6:12817143-12817162 MsG0680031009.01.T01:intron 30.0%
! CATTCACTTATCTTTTCCTT+TGG + Chr6:12814843-12814862 None:intergenic 30.0%
! GTTTTATAACGATATTAGGG+CGG + Chr6:12816393-12816412 None:intergenic 30.0%
! TTGAAAGCTTCTGAAGAATA+TGG - Chr6:12813937-12813956 MsG0680031009.01.T01:CDS 30.0%
! TTTAAAATCCGAACTGCAAA+GGG - Chr6:12817587-12817606 MsG0680031009.01.T01:intron 30.0%
!! GTGTTTTTGAAGGTTTTATG+AGG - Chr6:12817546-12817565 MsG0680031009.01.T01:intron 30.0%
!! TAACATTGGTTTAATCTTGC+AGG - Chr6:12817410-12817429 MsG0680031009.01.T01:intron 30.0%
!!! CAGATTTTAGAATCCGAATA+GGG + Chr6:12817514-12817533 None:intergenic 30.0%
!!! GCGTAAGCTATTTTTTCATA+AGG - Chr6:12816005-12816024 MsG0680031009.01.T01:intron 30.0%
!!! TCAGATTTTAGAATCCGAAT+AGG + Chr6:12817515-12817534 None:intergenic 30.0%
!!! TCTTTTTAAGGTGGATAAGT+GGG - Chr6:12816131-12816150 MsG0680031009.01.T01:intron 30.0%
!!! TTTGATCCTTTGACTAGTTT+TGG - Chr6:12816979-12816998 MsG0680031009.01.T01:CDS 30.0%
!!! TTTTAAAATCCGAACTGCAA+AGG - Chr6:12817586-12817605 MsG0680031009.01.T01:intron 30.0%
AACAAAGGCTTATCTCAAGT+TGG - Chr6:12813773-12813792 MsG0680031009.01.T01:three_prime_UTR 35.0%
ACAATACCCTTGATTGATCT+TGG - Chr6:12813880-12813899 MsG0680031009.01.T01:exon 35.0%
ACGAAATTCTCCAAATGACA+TGG + Chr6:12817918-12817937 None:intergenic 35.0%
AGATGCTGTTCAATATTGGA+AGG - Chr6:12814923-12814942 MsG0680031009.01.T01:intron 35.0%
AGTGTGGAGAAGAAGAATAT+AGG + Chr6:12816056-12816075 None:intergenic 35.0%
AGTTCCCCAATGAAATATTC+TGG + Chr6:12817198-12817217 None:intergenic 35.0%
ATATTCTTCTTCTCCACACT+TGG - Chr6:12816056-12816075 MsG0680031009.01.T01:intron 35.0%
ATCAATTTCAAGCCGACTAT+AGG - Chr6:12815819-12815838 MsG0680031009.01.T01:intron 35.0%
ATGAAATAGGTGATCAACCA+TGG - Chr6:12814756-12814775 MsG0680031009.01.T01:intron 35.0%
CATCATCCTTAAGAACTTGA+AGG + Chr6:12817350-12817369 None:intergenic 35.0%
CATCATCGCATAAGTTATTG+AGG - Chr6:12815268-12815287 MsG0680031009.01.T01:intron 35.0%
CCAAAGTTAAACTTGGTTCA+GGG + Chr6:12817263-12817282 None:intergenic 35.0%
CTTCATAATCTTGAATGCTG+GGG + Chr6:12814303-12814322 None:intergenic 35.0%
GTGAAACACATCAGAAACTA+TGG + Chr6:12816752-12816771 None:intergenic 35.0%
TATAGTAATCAAGCTCTCGA+GGG - Chr6:12814567-12814586 MsG0680031009.01.T01:CDS 35.0%
TCAATTTCAAGCCGACTATA+GGG - Chr6:12815820-12815839 MsG0680031009.01.T01:intron 35.0%
TCATCGCATAAGTTATTGAG+GGG - Chr6:12815270-12815289 MsG0680031009.01.T01:intron 35.0%
TGATGCAATAATTTCACGAC+TGG + Chr6:12815253-12815272 None:intergenic 35.0%
TTGGAATTAAGAACTGATGG+TGG + Chr6:12816299-12816318 None:intergenic 35.0%
! AAGGTTTGAGGTTTAAACAC+CGG - Chr6:12815636-12815655 MsG0680031009.01.T01:intron 35.0%
! CCTGAACCAAGTTTAACTTT+GGG - Chr6:12817261-12817280 MsG0680031009.01.T01:intron 35.0%
! TTTAGTCTAGGGTAGCAAAT+AGG + Chr6:12816571-12816590 None:intergenic 35.0%
! TTTTCCATAGTTTCTCCGTA+GGG - Chr6:12816592-12816611 MsG0680031009.01.T01:intron 35.0%
!! AAGGGTATTGTCTTACTTGA+AGG + Chr6:12813871-12813890 None:intergenic 35.0%
!! ACAACAAAAGCATTGGGAAT+AGG + Chr6:12817390-12817409 None:intergenic 35.0%
!! AGGGTATTGTCTTACTTGAA+GGG + Chr6:12813870-12813889 None:intergenic 35.0%
!! ATTTTGGAGATGCTTTGTGA+AGG - Chr6:12817159-12817178 MsG0680031009.01.T01:intron 35.0%
!! GAATGCTCTAAAGATCCAAA+TGG - Chr6:12814858-12814877 MsG0680031009.01.T01:intron 35.0%
!! TTTTGGAGATGCTTTGTGAA+GGG - Chr6:12817160-12817179 MsG0680031009.01.T01:intron 35.0%
!!! AGATTTTTTTTTGTGGTGGC+CGG + Chr6:12815658-12815677 None:intergenic 35.0%
!!! CTTTTTAAGGTGGATAAGTG+GGG - Chr6:12816132-12816151 MsG0680031009.01.T01:intron 35.0%
!!! GTCTTTTTAAGGTGGATAAG+TGG - Chr6:12816130-12816149 MsG0680031009.01.T01:intron 35.0%
!!! TATCTTTTCCTTTGGAGTCA+TGG + Chr6:12814835-12814854 None:intergenic 35.0%
AAAAACTCTCACACCAAGTG+TGG + Chr6:12816072-12816091 None:intergenic 40.0%
AAACTCCATGAATTCTCCAG+AGG + Chr6:12814973-12814992 None:intergenic 40.0%
AACTCCATGAATTCTCCAGA+GGG + Chr6:12814972-12814991 None:intergenic 40.0%
AAGTGATGAGCTAGTACTAC+TGG + Chr6:12817231-12817250 None:intergenic 40.0%
AGATGCTTTGTGAAGGGTTA+GGG - Chr6:12817166-12817185 MsG0680031009.01.T01:intron 40.0%
ATACCCTTGATTGATCTTGG+AGG - Chr6:12813883-12813902 MsG0680031009.01.T01:exon 40.0%
ATGTCCTCCAAGATCAATCA+AGG + Chr6:12813890-12813909 None:intergenic 40.0%
ATTAAAAACGGTGCGAGGTT+AGG - Chr6:12814381-12814400 MsG0680031009.01.T01:intron 40.0%
CCAATATTAAAAACGGTGCG+AGG - Chr6:12814376-12814395 MsG0680031009.01.T01:intron 40.0%
CCCAAAGTTAAACTTGGTTC+AGG + Chr6:12817264-12817283 None:intergenic 40.0%
CTCAGAAACCACCTAAATAC+CGG - Chr6:12814997-12815016 MsG0680031009.01.T01:intron 40.0%
GATAGAACCTGCAGAAGAAT+TGG - Chr6:12817862-12817881 MsG0680031009.01.T01:intron 40.0%
GATCAACCATGGAATTTCCA+AGG - Chr6:12814767-12814786 MsG0680031009.01.T01:intron 40.0%
GATTGTAGGGTCTCTATGTT+TGG + Chr6:12817292-12817311 None:intergenic 40.0%
GCAGATTGCAGACATTGAAT+TGG + Chr6:12816318-12816337 None:intergenic 40.0%
GCTAGACCCAAAGTTAAACT+TGG + Chr6:12817270-12817289 None:intergenic 40.0%
GGCTTCATCCATTAAATCCT+TGG + Chr6:12814787-12814806 None:intergenic 40.0%
GTATAGTAATCAAGCTCTCG+AGG - Chr6:12814566-12814585 MsG0680031009.01.T01:CDS 40.0%
TAAGGGTCCTAAGATTGAAC+AGG - Chr6:12817952-12817971 MsG0680031009.01.T01:CDS 40.0%
TGCAACACCTGTTCAATCTT+AGG + Chr6:12817962-12817981 None:intergenic 40.0%
TGTCCTCCAAGATCAATCAA+GGG + Chr6:12813889-12813908 None:intergenic 40.0%
TTATTTAAGTCGTTGAGGGG+AGG - Chr6:12815094-12815113 MsG0680031009.01.T01:intron 40.0%
TTCTTCTTCAGTGAGGTTGT+TGG - Chr6:12817099-12817118 MsG0680031009.01.T01:intron 40.0%
TTGCAACATAGAGAGAACGT+AGG - Chr6:12816438-12816457 MsG0680031009.01.T01:intron 40.0%
TTTCCATAGTTTCTCCGTAG+GGG - Chr6:12816593-12816612 MsG0680031009.01.T01:intron 40.0%
! ACATGGCCTTCAAGTTCTTA+AGG - Chr6:12817341-12817360 MsG0680031009.01.T01:intron 40.0%
! CCCTGAACCAAGTTTAACTT+TGG - Chr6:12817260-12817279 MsG0680031009.01.T01:intron 40.0%
! CTCTCTTTTCTTCTTCAGTG+AGG - Chr6:12817092-12817111 MsG0680031009.01.T01:CDS 40.0%
! CTGGAGAATTCATGGAGTTT+TGG - Chr6:12814973-12814992 MsG0680031009.01.T01:intron 40.0%
! CTTCAAGATCAAGAGGTACA+TGG - Chr6:12817324-12817343 MsG0680031009.01.T01:intron 40.0%
! GGGTATTGTCTTACTTGAAG+GGG + Chr6:12813869-12813888 None:intergenic 40.0%
! GTTTTCCATAGTTTCTCCGT+AGG - Chr6:12816591-12816610 MsG0680031009.01.T01:intron 40.0%
! TGTGACTTTTCACGTAAACG+CGG + Chr6:12816811-12816830 None:intergenic 40.0%
! TTCTGAGAGTTTAGTTCAGC+TGG + Chr6:12816206-12816225 None:intergenic 40.0%
!! CCTCGCACCGTTTTTAATAT+TGG + Chr6:12814379-12814398 None:intergenic 40.0%
ACACTCTAGTGGTTGCACAA+AGG + Chr6:12813827-12813846 None:intergenic 45.0%
ACTAGAGTGTAGACCTGGTA+AGG - Chr6:12813837-12813856 MsG0680031009.01.T01:three_prime_UTR 45.0%
ATCCAAACAGGCCCTATAGT+CGG + Chr6:12815834-12815853 None:intergenic 45.0%
CAACATAGAGAGAACGTAGG+AGG - Chr6:12816441-12816460 MsG0680031009.01.T01:intron 45.0%
CCATCTACCAATTCTTCTGC+AGG + Chr6:12817872-12817891 None:intergenic 45.0%
CCTGCAGAAGAATTGGTAGA+TGG - Chr6:12817869-12817888 MsG0680031009.01.T01:intron 45.0%
CGGTATTTAGGTGGTTTCTG+AGG + Chr6:12814999-12815018 None:intergenic 45.0%
CGTGTGAGAAACTCATAGGA+CGG - Chr6:12817610-12817629 MsG0680031009.01.T01:intron 45.0%
GAGAGAACGTAGGAGGAAAA+AGG - Chr6:12816448-12816467 MsG0680031009.01.T01:intron 45.0%
GAGATGCTTTGTGAAGGGTT+AGG - Chr6:12817165-12817184 MsG0680031009.01.T01:intron 45.0%
GCATTGGGAATAGGTTCAAC+TGG + Chr6:12817381-12817400 None:intergenic 45.0%
GTGTGAGAAACTCATAGGAC+GGG - Chr6:12817611-12817630 MsG0680031009.01.T01:intron 45.0%
GTTAAACTTGGTTCAGGGCA+AGG + Chr6:12817258-12817277 None:intergenic 45.0%
TCTAGTGGTTGCACAAAGGA+AGG + Chr6:12813823-12813842 None:intergenic 45.0%
TTACCAGGTCTACACTCTAG+TGG + Chr6:12813838-12813857 None:intergenic 45.0%
TTCCATAGTTTCTCCGTAGG+GGG - Chr6:12816594-12816613 MsG0680031009.01.T01:intron 45.0%
!! TTTCCTTTGGAGTCATGGCA+TGG + Chr6:12814830-12814849 None:intergenic 45.0%
!!! TTTAAAAATTTTATTTTGAT+TGG + Chr6:12815383-12815402 None:intergenic 5.0%
AAACTTGGTTCAGGGCAAGG+AGG + Chr6:12817255-12817274 None:intergenic 50.0%
AATTCTCCAGAGGGAGGACA+AGG + Chr6:12814963-12814982 None:intergenic 50.0%
AGCACCAACAAGCCTTCCAT+TGG + Chr6:12817765-12817784 None:intergenic 50.0%
AGGGCGTGTGAGAAACTCAT+AGG - Chr6:12817606-12817625 MsG0680031009.01.T01:intron 50.0%
AGTGGTTGCACAAAGGAAGG+TGG + Chr6:12813820-12813839 None:intergenic 50.0%
AGTTTCTCGCACGCCCTATT+CGG - Chr6:12817498-12817517 MsG0680031009.01.T01:intron 50.0%
ATTCTCCAGAGGGAGGACAA+GGG + Chr6:12814962-12814981 None:intergenic 50.0%
CAACCACTAGAGTGTAGACC+TGG - Chr6:12813832-12813851 MsG0680031009.01.T01:three_prime_UTR 50.0%
CACAAAGGAAGGTGGAACTG+AGG + Chr6:12813812-12813831 None:intergenic 50.0%
GTGCGAGAAACTCATAGGGT+GGG + Chr6:12817490-12817509 None:intergenic 50.0%
GTGGATAAGTGGGGTCTATG+TGG - Chr6:12816141-12816160 MsG0680031009.01.T01:intron 50.0%
GTTCCATGCCATGACTCCAA+AGG - Chr6:12814824-12814843 MsG0680031009.01.T01:intron 50.0%
GTTTCTCCGTAGGGGGAAAA+AGG - Chr6:12816601-12816620 MsG0680031009.01.T01:intron 50.0%
TCCATGAATTCTCCAGAGGG+AGG + Chr6:12814969-12814988 None:intergenic 50.0%
TTCCCCCTACGGAGAAACTA+TGG + Chr6:12816599-12816618 None:intergenic 50.0%
! CTCTCTCCTTTTTCCCCCTA+CGG + Chr6:12816610-12816629 None:intergenic 50.0%
! TCCTCCCTCTGGAGAATTCA+TGG - Chr6:12814965-12814984 MsG0680031009.01.T01:intron 50.0%
AGCCGACTATAGGGCCTGTT+TGG - Chr6:12815829-12815848 MsG0680031009.01.T01:intron 55.0%
AGGGCGTGCGAGAAACTCAT+AGG + Chr6:12817495-12817514 None:intergenic 55.0%
CGTGCGAGAAACTCATAGGG+TGG + Chr6:12817491-12817510 None:intergenic 55.0%
CTCACACGCCCTTTGCAGTT+CGG + Chr6:12817598-12817617 None:intergenic 55.0%
GAAGGGGTTGTGACCTTACC+AGG + Chr6:12813853-12813872 None:intergenic 55.0%
GGGCGTGCGAGAAACTCATA+GGG + Chr6:12817494-12817513 None:intergenic 55.0%
ACACACCCTTGTCCTCCCTC+TGG - Chr6:12814954-12814973 MsG0680031009.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr6 gene 12813760 12818117 12813760 ID=MsG0680031009.01;Name=MsG0680031009.01
Chr6 mRNA 12813760 12818117 12813760 ID=MsG0680031009.01.T01;Parent=MsG0680031009.01;Name=MsG0680031009.01.T01;_AED=0.36;_eAED=0.36;_QI=0|1|0.75|1|1|1|4|129|339
Chr6 exon 12813760 12814122 12813760 ID=MsG0680031009.01.T01:exon:9136;Parent=MsG0680031009.01.T01
Chr6 exon 12814446 12814767 12814446 ID=MsG0680031009.01.T01:exon:9135;Parent=MsG0680031009.01.T01
Chr6 exon 12816859 12817112 12816859 ID=MsG0680031009.01.T01:exon:9134;Parent=MsG0680031009.01.T01
Chr6 exon 12817908 12818117 12817908 ID=MsG0680031009.01.T01:exon:9133;Parent=MsG0680031009.01.T01
Chr6 CDS 12817908 12818117 12817908 ID=MsG0680031009.01.T01:cds;Parent=MsG0680031009.01.T01
Chr6 CDS 12816859 12817112 12816859 ID=MsG0680031009.01.T01:cds;Parent=MsG0680031009.01.T01
Chr6 CDS 12814446 12814767 12814446 ID=MsG0680031009.01.T01:cds;Parent=MsG0680031009.01.T01
Chr6 CDS 12813889 12814122 12813889 ID=MsG0680031009.01.T01:cds;Parent=MsG0680031009.01.T01
Chr6 three_prime_UTR 12813760 12813888 12813760 ID=MsG0680031009.01.T01:three_prime_utr;Parent=MsG0680031009.01.T01
Gene Sequence

>MsG0680031009.01.T01

ATGGAAACAATGGAACAAAGGCTTATCTCAAGTTGGTCTAATGTTAATTCCTCAGTTCCACCTTCCTTTGTGCAACCACTAGAGTGTAGACCTGGTAAGGTCACAACCCCTTCAAGTAAGACAATACCCTTGATTGATCTTGGAGGACATGATCATGCTCATACCATAATGCAAATTTTGAAAGCTTCTGAAGAATATGGTTTTTTTCAGGTGATCAACCATGGAATTTCCAAGGATTTAATGGATGAAGCCTTCAATATTTTCAAAGAGTTCCATGCCATGACTCCAAAGGAAAAGATAAGTGAATGCTCTAAAGATCCAAATGGAATTAATTGTAAGATATATGCAAGTAGTGAGAATTACCAAATAGATGCTGTTCAATATTGGAAGGACACATTGACACACCCTTGTCCTCCCTCTGGAGAATTCATGGAGTTTTGGCCTCAGAAACCACCTAAATACCGTGAGGTTGTTGGTAAATATACACAAGAACTGAACAAATTGGGACATGAAATTTTGGAGATGCTTTGTGAAGGGTTAGGGCTTAAACCAGAATATTTCATTGGGGAACTTAGTGAAAATCCAGTAGTACTAGCTCATCACTTTCCTCCTTGCCCTGAACCAAGTTTAACTTTGGGTCTAGCCAAACATAGAGACCCTACAATCATCACTATTCTACTTCAAGATCAAGAGGTACATGGCCTTCAAGTTCTTAAGGATGATGAATGGATTCCAGTTGAACCTATTCCCAATGCTTTTGTTGTTAACATTGGTTTAATCTTGCAGATAATCACCAATGGAAGGCTTGTTGGTGCTGAACATAGAGTTGTGACAAATTCAAAAAGTGTACGTACATCTGTTGCATATTTCATCTATCCATCATTTTCAAGAATGATAGAACCTGCAGAAGAATTGGTAGATGGAAACAATCCTCCAATATATAAATCCATGTCATTTGGAGAATTTCGTAAGAAGTTCTATGATAAGGGTCCTAAGATTGAACAGGTGTTGCAATCCTAA

Protein sequence

>MsG0680031009.01.T01

METMEQRLISSWSNVNSSVPPSFVQPLECRPGKVTTPSSKTIPLIDLGGHDHAHTIMQILKASEEYGFFQVINHGISKDLMDEAFNIFKEFHAMTPKEKISECSKDPNGINCKIYASSENYQIDAVQYWKDTLTHPCPPSGEFMEFWPQKPPKYREVVGKYTQELNKLGHEILEMLCEGLGLKPEYFIGELSENPVVLAHHFPPCPEPSLTLGLAKHRDPTIITILLQDQEVHGLQVLKDDEWIPVEPIPNAFVVNIGLILQIITNGRLVGAEHRVVTNSKSVRTSVAYFIYPSFSRMIEPAEELVDGNNPPIYKSMSFGEFRKKFYDKGPKIEQVLQS*