Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017754.01.T03 | XP_013462098.1 | 96.667 | 210 | 7 | 0 | 1 | 210 | 83 | 292 | 4.07E-145 | 416 |
| MsG0380017754.01.T02 | XP_013462098.1 | 96.853 | 286 | 9 | 0 | 1 | 286 | 7 | 292 | 0 | 565 |
| MsG0380017754.01.T01 | XP_027190272.1 | 84.286 | 210 | 29 | 1 | 1 | 206 | 1 | 210 | 4.04E-125 | 362 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017754.01.T01 | Q9SYY4 | 55.172 | 116 | 50 | 2 | 19 | 132 | 7 | 122 | 1.10E-37 | 135 |
| MsG0380017754.01.T02 | Q9SYY4 | 56.184 | 283 | 121 | 3 | 7 | 286 | 7 | 289 | 2.75E-106 | 313 |
| MsG0380017754.01.T03 | Q9SYY4 | 58.962 | 212 | 85 | 2 | 1 | 210 | 78 | 289 | 2.75E-81 | 247 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017754.01.T01 | A0A3Q7YB57 | 84.286 | 210 | 29 | 1 | 1 | 206 | 1 | 210 | 1.93e-125 | 362 |
| MsG0380017754.01.T02 | A0A072V432 | 96.853 | 286 | 9 | 0 | 1 | 286 | 7 | 292 | 0.0 | 565 |
| MsG0380017754.01.T03 | A0A072V432 | 96.667 | 210 | 7 | 0 | 1 | 210 | 83 | 292 | 1.94e-145 | 416 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048036.01 | MsG0380017754.01 | 0.881779 | 1.807484e-70 | 1.072877e-66 |
| MsG0080048301.01 | MsG0380017754.01 | 0.843106 | 1.717839e-58 | 2.659493e-55 |
| MsG0080048345.01 | MsG0380017754.01 | 0.821043 | 4.979067e-53 | 4.006973e-50 |
| MsG0080048347.01 | MsG0380017754.01 | 0.872424 | 3.215183e-67 | 1.344899e-63 |
| MsG0080048348.01 | MsG0380017754.01 | 0.800395 | 1.470806e-48 | 6.840960e-46 |
| MsG0080048349.01 | MsG0380017754.01 | 0.819676 | 1.024657e-52 | 7.937471e-50 |
| MsG0080048350.01 | MsG0380017754.01 | 0.804116 | 2.520639e-49 | 1.288960e-46 |
| MsG0080048352.01 | MsG0380017754.01 | 0.873259 | 1.688406e-67 | 7.279872e-64 |
| MsG0180000148.01 | MsG0380017754.01 | 0.813046 | 3.120595e-51 | 2.016225e-48 |
| MsG0180000234.01 | MsG0380017754.01 | 0.853984 | 1.664629e-61 | 3.662817e-58 |
| MsG0180000738.01 | MsG0380017754.01 | 0.814187 | 1.750304e-51 | 1.166482e-48 |
| MsG0180000929.01 | MsG0380017754.01 | 0.812628 | 3.853695e-51 | 2.462522e-48 |
| MsG0180001463.01 | MsG0380017754.01 | 0.837220 | 5.909993e-57 | 7.625093e-54 |
| MsG0180001513.01 | MsG0380017754.01 | 0.805752 | 1.147168e-49 | 6.118725e-47 |
| MsG0180001533.01 | MsG0380017754.01 | 0.852424 | 4.659676e-61 | 9.731672e-58 |
| MsG0180001691.01 | MsG0380017754.01 | 0.831553 | 1.563732e-55 | 1.702887e-52 |
| MsG0180002274.01 | MsG0380017754.01 | 0.821974 | 3.035654e-53 | 2.507269e-50 |
| MsG0180002935.01 | MsG0380017754.01 | 0.801984 | 6.956937e-49 | 3.368503e-46 |
| MsG0180003235.01 | MsG0380017754.01 | 0.850485 | 1.647527e-60 | 3.231835e-57 |
| MsG0180003240.01 | MsG0380017754.01 | 0.847369 | 1.208175e-59 | 2.142679e-56 |
| MsG0180003248.01 | MsG0380017754.01 | 0.845980 | 2.893671e-59 | 4.908042e-56 |
| MsG0180003249.01 | MsG0380017754.01 | 0.829234 | 5.770985e-55 | 5.871530e-52 |
| MsG0180003250.01 | MsG0380017754.01 | 0.836652 | 8.253564e-57 | 1.046699e-53 |
| MsG0180003757.01 | MsG0380017754.01 | -0.820592 | 6.323740e-53 | 5.024547e-50 |
| MsG0180004203.01 | MsG0380017754.01 | 0.851531 | 8.354220e-61 | 1.695990e-57 |
| MsG0180004328.01 | MsG0380017754.01 | 0.848126 | 7.477251e-60 | 1.358244e-56 |
| MsG0180004502.01 | MsG0380017754.01 | -0.819956 | 8.844052e-53 | 6.905092e-50 |
| MsG0180004773.01 | MsG0380017754.01 | -0.812209 | 4.756998e-51 | 3.006052e-48 |
| MsG0180004942.01 | MsG0380017754.01 | 0.852240 | 5.257591e-61 | 1.091636e-57 |
| MsG0180005328.01 | MsG0380017754.01 | 0.804047 | 2.605217e-49 | 1.329855e-46 |
| MsG0180005356.01 | MsG0380017754.01 | 0.872463 | 3.120228e-67 | 1.307053e-63 |
| MsG0180005357.01 | MsG0380017754.01 | 0.846463 | 2.138785e-59 | 3.684672e-56 |
| MsG0180005358.01 | MsG0380017754.01 | 0.865101 | 7.539227e-65 | 2.423654e-61 |
| MsG0180005572.01 | MsG0380017754.01 | 0.803498 | 3.387902e-49 | 1.705155e-46 |
| MsG0180005648.01 | MsG0380017754.01 | 0.887407 | 1.466542e-72 | 1.089208e-68 |
| MsG0280006442.01 | MsG0380017754.01 | 0.840441 | 8.679560e-58 | 1.236461e-54 |
| MsG0280006452.01 | MsG0380017754.01 | -0.805932 | 1.051286e-49 | 5.632998e-47 |
| MsG0280010802.01 | MsG0380017754.01 | 0.888091 | 8.025577e-73 | 6.128143e-69 |
| MsG0280011042.01 | MsG0380017754.01 | 0.813734 | 2.203050e-51 | 1.450315e-48 |
| MsG0280011165.01 | MsG0380017754.01 | 0.849675 | 2.777162e-60 | 5.305626e-57 |
| MsG0280011193.01 | MsG0380017754.01 | 0.819471 | 1.141376e-52 | 8.791750e-50 |
| MsG0280011203.01 | MsG0380017754.01 | 0.826455 | 2.687124e-54 | 2.521305e-51 |
| MsG0280011238.01 | MsG0380017754.01 | 0.832923 | 7.164003e-56 | 8.123751e-53 |
| MsG0280011267.01 | MsG0380017754.01 | 0.801676 | 8.046115e-49 | 3.865622e-46 |
| MsG0380011613.01 | MsG0380017754.01 | 0.856850 | 2.434533e-62 | 5.889210e-59 |
| MsG0380011635.01 | MsG0380017754.01 | 0.838442 | 2.868997e-57 | 3.843312e-54 |
| MsG0380011968.01 | MsG0380017754.01 | 0.809138 | 2.194040e-50 | 1.277964e-47 |
| MsG0380011974.01 | MsG0380017754.01 | 0.817902 | 2.591877e-52 | 1.911644e-49 |
| MsG0380012654.01 | MsG0380017754.01 | 0.862950 | 3.523198e-64 | 1.050305e-60 |
| MsG0380013114.01 | MsG0380017754.01 | -0.812445 | 4.224522e-51 | 2.686696e-48 |
| MsG0380013272.01 | MsG0380017754.01 | 0.814947 | 1.188635e-51 | 8.085510e-49 |
| MsG0380013278.01 | MsG0380017754.01 | 0.802253 | 6.125224e-49 | 2.986374e-46 |
| MsG0380013285.01 | MsG0380017754.01 | 0.833476 | 5.218760e-56 | 6.016600e-53 |
| MsG0380013300.01 | MsG0380017754.01 | 0.877869 | 4.446332e-69 | 2.272001e-65 |
| MsG0380013449.01 | MsG0380017754.01 | 0.833960 | 3.948935e-56 | 4.619914e-53 |
| MsG0380013452.01 | MsG0380017754.01 | 0.853425 | 2.410469e-61 | 5.206496e-58 |
| MsG0380013458.01 | MsG0380017754.01 | 0.800854 | 1.185405e-48 | 5.578337e-46 |
| MsG0380014642.01 | MsG0380017754.01 | -0.800177 | 1.628554e-48 | 7.532749e-46 |
| MsG0380015010.01 | MsG0380017754.01 | 0.804470 | 2.126728e-49 | 1.097435e-46 |
| MsG0380015080.01 | MsG0380017754.01 | 0.816776 | 4.644989e-52 | 3.321973e-49 |
| MsG0380015110.01 | MsG0380017754.01 | 0.816968 | 4.205540e-52 | 3.023818e-49 |
| MsG0380015201.01 | MsG0380017754.01 | -0.809333 | 1.993242e-50 | 1.167026e-47 |
| MsG0380015323.01 | MsG0380017754.01 | 0.802048 | 6.747829e-49 | 3.272772e-46 |
| MsG0380015369.01 | MsG0380017754.01 | 0.820415 | 6.944383e-53 | 5.491570e-50 |
| MsG0380015572.01 | MsG0380017754.01 | 0.834399 | 3.065044e-56 | 3.633223e-53 |
| MsG0380016020.01 | MsG0380017754.01 | 0.804499 | 2.097762e-49 | 1.083264e-46 |
| MsG0380016086.01 | MsG0380017754.01 | 0.874531 | 6.278980e-68 | 2.835918e-64 |
| MsG0380016377.01 | MsG0380017754.01 | 0.800486 | 1.409043e-48 | 6.568899e-46 |
| MsG0380016801.01 | MsG0380017754.01 | 0.820621 | 6.225478e-53 | 4.950604e-50 |
| MsG0380016839.01 | MsG0380017754.01 | 0.816568 | 5.172721e-52 | 3.678262e-49 |
| MsG0380016862.01 | MsG0380017754.01 | 0.808923 | 2.439436e-50 | 1.412637e-47 |
| MsG0380016935.01 | MsG0380017754.01 | -0.804845 | 1.776781e-49 | 9.258310e-47 |
| MsG0380017151.01 | MsG0380017754.01 | 0.890299 | 1.116993e-73 | 9.340485e-70 |
| MsG0380017405.01 | MsG0380017754.01 | -0.824504 | 7.789544e-54 | 6.912614e-51 |
| MsG0380017690.01 | MsG0380017754.01 | 0.847036 | 1.490401e-59 | 2.615129e-56 |
| MsG0380017754.01 | MsG0380017859.01 | 0.834834 | 2.383047e-56 | 2.861818e-53 |
| MsG0380017754.01 | MsG0480018440.01 | 0.822858 | 1.891117e-53 | 1.601926e-50 |
| MsG0380017754.01 | MsG0480018521.01 | 0.855060 | 8.124595e-62 | 1.852202e-58 |
| MsG0380017754.01 | MsG0480018522.01 | 0.834908 | 2.282573e-56 | 2.747234e-53 |
| MsG0380017754.01 | MsG0480018628.01 | -0.815231 | 1.027685e-51 | 7.045014e-49 |
| MsG0380017754.01 | MsG0480018768.01 | 0.805478 | 1.309565e-49 | 6.935314e-47 |
| MsG0380017754.01 | MsG0480019105.01 | 0.824607 | 7.366413e-54 | 6.557568e-51 |
| MsG0380017754.01 | MsG0480019217.01 | 0.831095 | 2.026637e-55 | 2.176992e-52 |
| MsG0380017754.01 | MsG0480019842.01 | 0.802016 | 6.852540e-49 | 3.320768e-46 |
| MsG0380017754.01 | MsG0480020497.01 | 0.844718 | 6.356064e-59 | 1.035232e-55 |
| MsG0380017754.01 | MsG0480021131.01 | 0.800748 | 1.245741e-48 | 5.846263e-46 |
| MsG0380017754.01 | MsG0480021327.01 | -0.828405 | 9.154841e-55 | 9.091313e-52 |
| MsG0380017754.01 | MsG0480021331.01 | -0.815904 | 7.279409e-52 | 5.083000e-49 |
| MsG0380017754.01 | MsG0480021697.01 | 0.850949 | 1.219948e-60 | 2.430220e-57 |
| MsG0380017754.01 | MsG0480022308.01 | 0.811164 | 8.029535e-51 | 4.934372e-48 |
| MsG0380017754.01 | MsG0480022309.01 | 0.837436 | 5.202464e-57 | 6.757507e-54 |
| MsG0380017754.01 | MsG0480022310.01 | 0.844838 | 5.899935e-59 | 9.645760e-56 |
| MsG0380017754.01 | MsG0480022311.01 | 0.831343 | 1.761117e-55 | 1.905764e-52 |
| MsG0380017754.01 | MsG0480022400.01 | 0.814003 | 1.921569e-51 | 1.274258e-48 |
| MsG0380017754.01 | MsG0480022638.01 | 0.825251 | 5.189372e-54 | 4.705023e-51 |
| MsG0380017754.01 | MsG0480022735.01 | 0.818853 | 1.578397e-52 | 1.195155e-49 |
| MsG0380017754.01 | MsG0480022736.01 | 0.815158 | 1.066642e-51 | 7.297421e-49 |
| MsG0380017754.01 | MsG0480022833.01 | 0.823447 | 1.378695e-53 | 1.187350e-50 |
| MsG0380017754.01 | MsG0480023006.01 | -0.803416 | 3.522208e-49 | 1.768998e-46 |
| MsG0380017754.01 | MsG0480023102.01 | 0.829990 | 3.776885e-55 | 3.928202e-52 |
| MsG0380017754.01 | MsG0480023107.01 | 0.868137 | 8.165218e-66 | 2.922040e-62 |
| MsG0380017754.01 | MsG0480023187.01 | -0.805381 | 1.372342e-49 | 7.249698e-47 |
| MsG0380017754.01 | MsG0480023267.01 | 0.805442 | 1.332382e-49 | 7.049709e-47 |
| MsG0380017754.01 | MsG0480023349.01 | 0.865106 | 7.512122e-65 | 2.415352e-61 |
| MsG0380017754.01 | MsG0480023921.01 | 0.852460 | 4.550081e-61 | 9.514036e-58 |
| MsG0380017754.01 | MsG0580024176.01 | 0.814813 | 1.272809e-51 | 8.627170e-49 |
| MsG0380017754.01 | MsG0580024202.01 | 0.808321 | 3.280842e-50 | 1.870208e-47 |
| MsG0380017754.01 | MsG0580024207.01 | 0.820573 | 6.387985e-53 | 5.073209e-50 |
| MsG0380017754.01 | MsG0580024217.01 | 0.829599 | 4.704879e-55 | 4.838041e-52 |
| MsG0380017754.01 | MsG0580024218.01 | 0.860680 | 1.744917e-63 | 4.810079e-60 |
| MsG0380017754.01 | MsG0580024219.01 | 0.848946 | 4.430451e-60 | 8.266097e-57 |
| MsG0380017754.01 | MsG0580024220.01 | 0.830857 | 2.318400e-55 | 2.472950e-52 |
| MsG0380017754.01 | MsG0580024408.01 | 0.881232 | 2.846987e-70 | 1.654720e-66 |
| MsG0380017754.01 | MsG0580024986.01 | 0.846960 | 1.563553e-59 | 2.736943e-56 |
| MsG0380017754.01 | MsG0580024990.01 | 0.874229 | 7.950413e-68 | 3.550979e-64 |
| MsG0380017754.01 | MsG0580025507.01 | 0.806104 | 9.673668e-50 | 5.206064e-47 |
| MsG0380017754.01 | MsG0580025682.01 | 0.818543 | 1.855560e-52 | 1.393024e-49 |
| MsG0380017754.01 | MsG0580025683.01 | 0.834617 | 2.703099e-56 | 3.224939e-53 |
| MsG0380017754.01 | MsG0580025870.01 | 0.810998 | 8.721027e-51 | 5.336720e-48 |
| MsG0380017754.01 | MsG0580025965.01 | 0.810335 | 1.213488e-50 | 7.294562e-48 |
| MsG0380017754.01 | MsG0580026019.01 | 0.818444 | 1.954432e-52 | 1.463350e-49 |
| MsG0380017754.01 | MsG0580026492.01 | 0.804192 | 2.430205e-49 | 1.245105e-46 |
| MsG0380017754.01 | MsG0580026529.01 | 0.800780 | 1.227666e-48 | 5.765889e-46 |
| MsG0380017754.01 | MsG0580026925.01 | 0.807093 | 5.981751e-50 | 3.301904e-47 |
| MsG0380017754.01 | MsG0580027337.01 | 0.800257 | 1.569016e-48 | 7.272274e-46 |
| MsG0380017754.01 | MsG0580027638.01 | 0.810835 | 9.459768e-51 | 5.763169e-48 |
| MsG0380017754.01 | MsG0580027646.01 | 0.815091 | 1.104187e-51 | 7.540396e-49 |
| MsG0380017754.01 | MsG0580028490.01 | 0.800376 | 1.483641e-48 | 6.897649e-46 |
| MsG0380017754.01 | MsG0580029555.01 | 0.812097 | 5.032401e-51 | 3.170367e-48 |
| MsG0380017754.01 | MsG0580029626.01 | 0.800434 | 1.443867e-48 | 6.722510e-46 |
| MsG0380017754.01 | MsG0580029782.01 | 0.821911 | 3.138527e-53 | 2.587756e-50 |
| MsG0380017754.01 | MsG0580030133.01 | 0.889600 | 2.095631e-73 | 1.702295e-69 |
| MsG0380017754.01 | MsG0580030135.01 | 0.879325 | 1.366364e-69 | 7.376841e-66 |
| MsG0380017754.01 | MsG0580030145.01 | 0.833884 | 4.125628e-56 | 4.815549e-53 |
| MsG0380017754.01 | MsG0580030197.01 | -0.801350 | 9.385220e-49 | 4.472187e-46 |
| MsG0380017754.01 | MsG0680030336.01 | 0.823487 | 1.349053e-53 | 1.163203e-50 |
| MsG0380017754.01 | MsG0680030960.01 | 0.813007 | 3.182151e-51 | 2.053916e-48 |
| MsG0380017754.01 | MsG0680031009.01 | 0.833889 | 4.114467e-56 | 4.803237e-53 |
| MsG0380017754.01 | MsG0680031429.01 | 0.801867 | 7.350848e-49 | 3.549021e-46 |
| MsG0380017754.01 | MsG0680031813.01 | -0.804677 | 1.925527e-49 | 9.989646e-47 |
| MsG0380017754.01 | MsG0680033754.01 | 0.825126 | 5.555943e-54 | 5.019480e-51 |
| MsG0380017754.01 | MsG0680034229.01 | -0.813695 | 2.247667e-51 | 1.478095e-48 |
| MsG0380017754.01 | MsG0680034255.01 | 0.803358 | 3.621064e-49 | 1.815855e-46 |
| MsG0380017754.01 | MsG0680034317.01 | 0.801736 | 7.823643e-49 | 3.764349e-46 |
| MsG0380017754.01 | MsG0680034649.01 | 0.822068 | 2.887144e-53 | 2.390937e-50 |
| MsG0380017754.01 | MsG0680035841.01 | 0.814689 | 1.355930e-51 | 9.159947e-49 |
| MsG0380017754.01 | MsG0780035953.01 | 0.825703 | 4.056768e-54 | 3.725767e-51 |
| MsG0380017754.01 | MsG0780036199.01 | 0.803433 | 3.493561e-49 | 1.755383e-46 |
| MsG0380017754.01 | MsG0780036661.01 | 0.879017 | 1.755245e-69 | 9.367453e-66 |
| MsG0380017754.01 | MsG0780036959.01 | 0.800174 | 1.630747e-48 | 7.542330e-46 |
| MsG0380017754.01 | MsG0780036960.01 | 0.818901 | 1.539035e-52 | 1.166927e-49 |
| MsG0380017754.01 | MsG0780037182.01 | 0.801730 | 7.845518e-49 | 3.774332e-46 |
| MsG0380017754.01 | MsG0780037917.01 | 0.820187 | 7.829733e-53 | 6.152609e-50 |
| MsG0380017754.01 | MsG0780037943.01 | 0.816874 | 4.415223e-52 | 3.166308e-49 |
| MsG0380017754.01 | MsG0780038030.01 | -0.805261 | 1.453676e-49 | 7.655485e-47 |
| MsG0380017754.01 | MsG0780038047.01 | -0.800748 | 1.245857e-48 | 5.846782e-46 |
| MsG0380017754.01 | MsG0780038108.01 | -0.813441 | 2.555096e-51 | 1.668820e-48 |
| MsG0380017754.01 | MsG0780038263.01 | -0.814771 | 1.299802e-51 | 8.799872e-49 |
| MsG0380017754.01 | MsG0780038519.01 | 0.810382 | 1.185027e-50 | 7.132314e-48 |
| MsG0380017754.01 | MsG0780038622.01 | 0.815015 | 1.148072e-51 | 7.824392e-49 |
| MsG0380017754.01 | MsG0780038860.01 | 0.804987 | 1.658825e-49 | 8.675092e-47 |
| MsG0380017754.01 | MsG0780038922.01 | 0.838210 | 3.292302e-57 | 4.378921e-54 |
| MsG0380017754.01 | MsG0780038939.01 | 0.841646 | 4.187647e-58 | 6.192997e-55 |
| MsG0380017754.01 | MsG0780038963.01 | 0.859265 | 4.662032e-63 | 1.223877e-59 |
| MsG0380017754.01 | MsG0780039576.01 | 0.857971 | 1.134084e-62 | 2.849697e-59 |
| MsG0380017754.01 | MsG0780039839.01 | -0.820846 | 5.528411e-53 | 4.424298e-50 |
| MsG0380017754.01 | MsG0780039883.01 | 0.811580 | 6.521236e-51 | 4.051780e-48 |
| MsG0380017754.01 | MsG0780039968.01 | 0.862498 | 4.857938e-64 | 1.425767e-60 |
| MsG0380017754.01 | MsG0780039978.01 | 0.847709 | 9.739768e-60 | 1.746306e-56 |
| MsG0380017754.01 | MsG0780039979.01 | 0.800399 | 1.467566e-48 | 6.826720e-46 |
| MsG0380017754.01 | MsG0780040181.01 | 0.853785 | 1.899393e-61 | 4.151641e-58 |
| MsG0380017754.01 | MsG0780040321.01 | -0.802594 | 5.208526e-49 | 2.561625e-46 |
| MsG0380017754.01 | MsG0780040497.01 | 0.829443 | 5.133683e-55 | 5.254795e-52 |
| MsG0380017754.01 | MsG0780040806.01 | 0.848967 | 4.372798e-60 | 8.164087e-57 |
| MsG0380017754.01 | MsG0780041316.01 | 0.840371 | 9.052811e-58 | 1.286867e-54 |
| MsG0380017754.01 | MsG0780041317.01 | 0.803892 | 2.806504e-49 | 1.426968e-46 |
| MsG0380017754.01 | MsG0780041556.01 | 0.850160 | 2.031575e-60 | 3.943524e-57 |
| MsG0380017754.01 | MsG0780041574.01 | 0.827629 | 1.407503e-54 | 1.366214e-51 |
| MsG0380017754.01 | MsG0780041620.01 | -0.804490 | 2.107121e-49 | 1.087849e-46 |
| MsG0380017754.01 | MsG0780041720.01 | -0.808335 | 3.257264e-50 | 1.857498e-47 |
| MsG0380017754.01 | MsG0780041783.01 | -0.813587 | 2.373606e-51 | 1.556342e-48 |
| MsG0380017754.01 | MsG0880041855.01 | -0.801173 | 1.020362e-48 | 4.840382e-46 |
| MsG0380017754.01 | MsG0880042591.01 | 0.826735 | 2.304159e-54 | 2.179244e-51 |
| MsG0380017754.01 | MsG0880042740.01 | 0.847971 | 8.251282e-60 | 1.491593e-56 |
| MsG0380017754.01 | MsG0880042810.01 | 0.807709 | 4.426977e-50 | 2.483183e-47 |
| MsG0380017754.01 | MsG0880042858.01 | -0.809742 | 1.628152e-50 | 9.637383e-48 |
| MsG0380017754.01 | MsG0880042895.01 | -0.807222 | 5.615616e-50 | 3.110360e-47 |
| MsG0380017754.01 | MsG0880043364.01 | 0.834297 | 3.252094e-56 | 3.843235e-53 |
| MsG0380017754.01 | MsG0880043481.01 | 0.828085 | 1.093410e-54 | 1.075732e-51 |
| MsG0380017754.01 | MsG0880043828.01 | 0.818645 | 1.759095e-52 | 1.324244e-49 |
| MsG0380017754.01 | MsG0880045369.01 | -0.802630 | 5.120871e-49 | 2.520744e-46 |
| MsG0380017754.01 | MsG0880045385.01 | -0.815553 | 8.716107e-52 | 6.028310e-49 |
| MsG0380017754.01 | MsG0880045677.01 | 0.853504 | 2.288299e-61 | 4.955558e-58 |
| MsG0380017754.01 | MsG0880046308.01 | 0.811549 | 6.622980e-51 | 4.111708e-48 |
| MsG0380017754.01 | MsG0880046429.01 | 0.862922 | 3.596158e-64 | 1.071139e-60 |
| MsG0380017754.01 | MsG0880046469.01 | -0.815980 | 6.998522e-52 | 4.897383e-49 |
| MsG0380017754.01 | MsG0880046863.01 | 0.813666 | 2.279885e-51 | 1.498158e-48 |
| MsG0380017754.01 | MsG0880046996.01 | 0.823522 | 1.323740e-53 | 1.142514e-50 |
| MsG0380017754.01 | MsG0880047406.01 | -0.800267 | 1.561465e-48 | 7.239221e-46 |
| MsG0380017754.01 | MsG0880047665.01 | 0.862481 | 4.917116e-64 | 1.442300e-60 |
| MsG0380017754.01 | MsG0880047714.01 | 0.821226 | 4.518619e-53 | 3.654687e-50 |
| MsG0380017754.01 | MsG0880047747.01 | 0.837212 | 5.939049e-57 | 7.660589e-54 |
| MsG0280006534.01 | MsG0380017754.01 | -0.806640 | 7.457742e-50 | 4.068526e-47 |
| MsG0280006883.01 | MsG0380017754.01 | 0.813273 | 2.782493e-51 | 1.808886e-48 |
| MsG0280007216.01 | MsG0380017754.01 | 0.853256 | 2.694135e-61 | 5.786166e-58 |
| MsG0280007649.01 | MsG0380017754.01 | -0.804104 | 2.534932e-49 | 1.295868e-46 |
| MsG0280007650.01 | MsG0380017754.01 | -0.807238 | 5.573787e-50 | 3.088453e-47 |
| MsG0280007906.01 | MsG0380017754.01 | 0.807637 | 4.586152e-50 | 2.567621e-47 |
| MsG0280007911.01 | MsG0380017754.01 | 0.850778 | 1.362586e-60 | 2.698905e-57 |
| MsG0280007922.01 | MsG0380017754.01 | 0.812273 | 4.607213e-51 | 2.916464e-48 |
| MsG0280008405.01 | MsG0380017754.01 | 0.853136 | 2.917445e-61 | 6.239294e-58 |
| MsG0280008601.01 | MsG0380017754.01 | 0.802119 | 6.525630e-49 | 3.170609e-46 |
| MsG0280009167.01 | MsG0380017754.01 | 0.822045 | 2.921907e-53 | 2.418251e-50 |
| MsG0280009667.01 | MsG0380017754.01 | 0.808248 | 3.399238e-50 | 1.934045e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017754.01.T03 | MTR_3g111610 | 96.667 | 210 | 7 | 0 | 1 | 210 | 83 | 292 | 4.92e-149 | 416 |
| MsG0380017754.01.T03 | MTR_8g078200 | 59.242 | 211 | 83 | 2 | 1 | 209 | 85 | 294 | 7.41e-83 | 249 |
| MsG0380017754.01.T03 | MTR_5g019330 | 58.706 | 201 | 82 | 1 | 1 | 201 | 80 | 279 | 1.80e-79 | 240 |
| MsG0380017754.01.T03 | MTR_1g021915 | 71.141 | 149 | 42 | 1 | 1 | 148 | 77 | 225 | 6.30e-68 | 209 |
| MsG0380017754.01.T03 | MTR_7g113780 | 37.143 | 175 | 98 | 4 | 39 | 203 | 101 | 273 | 4.98e-28 | 107 |
| MsG0380017754.01.T02 | MTR_3g111610 | 96.853 | 286 | 9 | 0 | 1 | 286 | 7 | 292 | 0.0 | 565 |
| MsG0380017754.01.T02 | MTR_8g078200 | 56.690 | 284 | 119 | 3 | 5 | 285 | 12 | 294 | 1.00e-103 | 305 |
| MsG0380017754.01.T02 | MTR_5g019330 | 52.381 | 294 | 127 | 4 | 7 | 289 | 9 | 300 | 5.17e-101 | 298 |
| MsG0380017754.01.T02 | MTR_1g021915 | 68.182 | 220 | 69 | 1 | 6 | 224 | 6 | 225 | 6.59e-98 | 288 |
| MsG0380017754.01.T02 | MTR_7g113780 | 32.616 | 279 | 166 | 6 | 9 | 279 | 9 | 273 | 2.25e-32 | 120 |
| MsG0380017754.01.T01 | MTR_3g111610 | 96.800 | 125 | 4 | 0 | 8 | 132 | 2 | 126 | 1.95e-83 | 249 |
| MsG0380017754.01.T01 | MTR_3g111610 | 93.056 | 72 | 5 | 0 | 132 | 203 | 221 | 292 | 1.66e-43 | 147 |
| MsG0380017754.01.T01 | MTR_1g021915 | 67.826 | 115 | 37 | 0 | 18 | 132 | 6 | 120 | 6.22e-46 | 152 |
| MsG0380017754.01.T01 | MTR_8g078200 | 54.237 | 118 | 52 | 2 | 17 | 133 | 12 | 128 | 3.14e-31 | 116 |
| MsG0380017754.01.T01 | MTR_8g078200 | 47.436 | 78 | 38 | 2 | 128 | 202 | 217 | 294 | 2.87e-15 | 73.2 |
| MsG0380017754.01.T01 | MTR_5g019330 | 47.414 | 116 | 57 | 3 | 19 | 132 | 9 | 122 | 3.38e-30 | 113 |
| MsG0380017754.01.T01 | MTR_5g019330 | 65.574 | 61 | 21 | 0 | 133 | 193 | 218 | 278 | 9.36e-20 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017754.01.T03 | AT1G75000 | 61.856 | 194 | 73 | 1 | 1 | 193 | 76 | 269 | 1.81e-82 | 247 |
| MsG0380017754.01.T03 | AT4G36830 | 58.962 | 212 | 85 | 2 | 1 | 210 | 78 | 289 | 2.81e-82 | 247 |
| MsG0380017754.01.T03 | AT4G36830 | 64.641 | 181 | 62 | 2 | 1 | 179 | 78 | 258 | 4.28e-78 | 237 |
| MsG0380017754.01.T03 | AT3G06470 | 30.814 | 172 | 113 | 2 | 39 | 208 | 108 | 275 | 1.57e-22 | 92.8 |
| MsG0380017754.01.T03 | AT3G06460 | 34.459 | 148 | 94 | 2 | 39 | 183 | 105 | 252 | 2.14e-22 | 92.8 |
| MsG0380017754.01.T02 | AT4G36830 | 56.184 | 283 | 121 | 3 | 7 | 286 | 7 | 289 | 2.80e-107 | 313 |
| MsG0380017754.01.T02 | AT1G75000 | 57.519 | 266 | 108 | 2 | 10 | 270 | 5 | 270 | 9.06e-103 | 301 |
| MsG0380017754.01.T02 | AT4G36830 | 59.921 | 252 | 98 | 3 | 7 | 255 | 7 | 258 | 1.05e-102 | 302 |
| MsG0380017754.01.T02 | AT3G06470 | 29.643 | 280 | 185 | 3 | 7 | 284 | 6 | 275 | 5.94e-34 | 125 |
| MsG0380017754.01.T02 | AT3G06460 | 31.890 | 254 | 161 | 3 | 9 | 259 | 8 | 252 | 1.01e-33 | 125 |
| MsG0380017754.01.T01 | AT4G36830 | 55.172 | 116 | 50 | 2 | 19 | 132 | 7 | 122 | 1.12e-38 | 135 |
| MsG0380017754.01.T01 | AT4G36830 | 46.479 | 71 | 38 | 0 | 133 | 203 | 219 | 289 | 2.06e-13 | 67.8 |
| MsG0380017754.01.T01 | AT4G36830 | 54.701 | 117 | 51 | 2 | 19 | 133 | 7 | 123 | 3.69e-38 | 134 |
| MsG0380017754.01.T01 | AT1G75000 | 52.586 | 116 | 51 | 1 | 22 | 133 | 5 | 120 | 1.60e-33 | 121 |
| MsG0380017754.01.T01 | AT1G75000 | 56.452 | 62 | 25 | 2 | 128 | 187 | 209 | 270 | 8.46e-15 | 71.6 |
Find 72 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCATAATGTCATATTTA+TGG | 0.085359 | 3:+100339990 | MsG0380017754.01.T01:intron |
| TGGTTTATGGGTACCGATTT+TGG | 0.198534 | 3:+100340074 | MsG0380017754.01.T01:intron |
| CAAAGGAGAAGCTTAAATAT+TGG | 0.300375 | 3:+100339507 | MsG0380017754.01.T01:CDS |
| TTGGTTTGTTCAGTGGTTTA+TGG | 0.318522 | 3:+100340061 | MsG0380017754.01.T01:intron |
| TGGTTTGTTCAGTGGTTTAT+GGG | 0.319057 | 3:+100340062 | MsG0380017754.01.T01:intron |
| CTCTGCCGAAGCTGAGGTTC+GGG | 0.330316 | 3:+100339763 | MsG0380017754.01.T01:CDS |
| GGTGGAGTCCTGCCCTATCA+TGG | 0.330679 | 3:+100339561 | MsG0380017754.01.T01:CDS |
| TGGTTACTATGTTTCCCATT+AGG | 0.339051 | 3:+100339830 | MsG0380017754.01.T01:CDS |
| ACCATGTGGCGCCCCATGAT+AGG | 0.342874 | 3:-100339574 | None:intergenic |
| TTCGGGACACTCGTTGGCTT+TGG | 0.352399 | 3:+100339780 | MsG0380017754.01.T01:CDS |
| CCATTCGAATGGTGTGGTTC+GGG | 0.352928 | 3:-100339810 | None:intergenic |
| GATGGAGATGTAAAAGAATA+TGG | 0.359719 | 3:-100339612 | None:intergenic |
| GGTGTTGTTTGGTTGCAATT+TGG | 0.370656 | 3:+100340150 | MsG0380017754.01.T01:CDS |
| ACCATTCGAATGGTGTGGTT+CGG | 0.373999 | 3:-100339811 | None:intergenic |
| TCTCTGCCGAAGCTGAGGTT+CGG | 0.381313 | 3:+100339762 | MsG0380017754.01.T01:CDS |
| GCAGTCTCCGACATAGTTTA+AGG | 0.392729 | 3:-100339655 | None:intergenic |
| AGAGGAGGATGTAATGGAAT+TGG | 0.395778 | 3:+100340208 | MsG0380017754.01.T01:CDS |
| TGACTTAGCATCCTCTCGTT+TGG | 0.401689 | 3:-100340326 | None:intergenic |
| CTCGTTATCTCCACATGATT+AGG | 0.406709 | 3:+100339903 | MsG0380017754.01.T01:intron |
| GTGGAGTCCTGCCCTATCAT+GGG | 0.417355 | 3:+100339562 | MsG0380017754.01.T01:CDS |
| CCAGAGGGACGAATACCTAA+TGG | 0.425993 | 3:-100339845 | None:intergenic |
| ATGGAGAGACTATGAATTGC+GGG | 0.428020 | 3:-100339701 | None:intergenic |
| GGCTATATTGTTCTCTACGT+TGG | 0.440749 | 3:+100340042 | MsG0380017754.01.T01:intron |
| CCATTAGGTATTCGTCCCTC+TGG | 0.440777 | 3:+100339845 | MsG0380017754.01.T01:intron |
| ACCCATCGATTGTTTCATTC+CGG | 0.441146 | 3:+100339540 | MsG0380017754.01.T01:CDS |
| GCCCAATTTGTGTCCAAAAT+CGG | 0.446681 | 3:-100340087 | None:intergenic |
| CCCTATCATGGGGCGCCACA+TGG | 0.448225 | 3:+100339573 | MsG0380017754.01.T01:CDS |
| TGCAATTTGGCGTGCCATGT+TGG | 0.456547 | 3:+100340163 | MsG0380017754.01.T01:CDS |
| AGACTATGAATTGCGGGTAA+TGG | 0.464367 | 3:-100339695 | None:intergenic |
| CCAAAAGAAAACACGACCAG+AGG | 0.468733 | 3:-100339861 | None:intergenic |
| TTCACAATCGCTTCAAGTGT+TGG | 0.483943 | 3:+100340021 | MsG0380017754.01.T01:intron |
| TATTCTAGAGGAGGATGTAA+TGG | 0.484849 | 3:+100340202 | MsG0380017754.01.T01:CDS |
| CATAATGTCATATTTATGGC+TGG | 0.485987 | 3:+100339994 | MsG0380017754.01.T01:intron |
| CCATGTGGCGCCCCATGATA+GGG | 0.489433 | 3:-100339573 | None:intergenic |
| CAGAGGGACGAATACCTAAT+GGG | 0.489482 | 3:-100339844 | None:intergenic |
| GAGACTGCGTCCTGTACCGT+TGG | 0.490817 | 3:+100339670 | MsG0380017754.01.T01:CDS |
| CTCTACGTTGGTTTGTTCAG+TGG | 0.496461 | 3:+100340054 | MsG0380017754.01.T01:intron |
| GGTAATGGACCCAACGGTAC+AGG | 0.501814 | 3:-100339680 | None:intergenic |
| CATCGATTGTTTCATTCCGG+TGG | 0.507689 | 3:+100339543 | MsG0380017754.01.T01:CDS |
| TTCTAATTGTCAAATTTCTG+TGG | 0.535934 | 3:-100340352 | None:intergenic |
| AGACTGCGTCCTGTACCGTT+GGG | 0.542171 | 3:+100339671 | MsG0380017754.01.T01:CDS |
| ATGTCGATACGCACTGTCAA+AGG | 0.542981 | 3:+100340290 | MsG0380017754.01.T01:CDS |
| GTGGCGCCCCATGATAGGGC+AGG | 0.544256 | 3:-100339569 | None:intergenic |
| AGTGTCCCGAACCTCAGCTT+CGG | 0.549474 | 3:-100339768 | None:intergenic |
| GTCACAAACACATTCAATGC+TGG | 0.549867 | 3:+100339478 | MsG0380017754.01.T01:CDS |
| CTGAGGTTCGGGACACTCGT+TGG | 0.557119 | 3:+100339774 | MsG0380017754.01.T01:CDS |
| ATGATAGGGCAGGACTCCAC+CGG | 0.564738 | 3:-100339559 | None:intergenic |
| CAAAAGAAAACACGACCAGA+GGG | 0.576524 | 3:-100339860 | None:intergenic |
| GATGTAATGGAATTGGAGCA+TGG | 0.578211 | 3:+100340215 | MsG0380017754.01.T01:CDS |
| TGTTAGGGAGATTAATGACA+TGG | 0.578778 | 3:-100339720 | None:intergenic |
| ATGTAATGGAATTGGAGCAT+GGG | 0.582311 | 3:+100340216 | MsG0380017754.01.T01:CDS |
| TTGTTGCATTATTCTAGAGG+AGG | 0.584042 | 3:+100340193 | MsG0380017754.01.T01:CDS |
| TGAAAATTGTCCTAATCATG+TGG | 0.587061 | 3:-100339913 | None:intergenic |
| ATGTCATCCTTAAACTATGT+CGG | 0.588484 | 3:+100339648 | MsG0380017754.01.T01:CDS |
| GACATGGATAGTTACCGTGA+TGG | 0.592325 | 3:-100339630 | None:intergenic |
| AAACATAGTAACCATTCGAA+TGG | 0.596177 | 3:-100339821 | None:intergenic |
| TATCATGGGGCGCCACATGG+TGG | 0.596265 | 3:+100339576 | MsG0380017754.01.T01:CDS |
| TTCAATGCTGGAGTTTACAA+AGG | 0.606034 | 3:+100339490 | MsG0380017754.01.T01:CDS |
| CCCGAACCACACCATTCGAA+TGG | 0.608670 | 3:+100339810 | MsG0380017754.01.T01:CDS |
| TGGAGTCCTGCCCTATCATG+GGG | 0.613856 | 3:+100339563 | MsG0380017754.01.T01:CDS |
| ACCGGAATGAAACAATCGAT+GGG | 0.613935 | 3:-100339541 | None:intergenic |
| CACCGGAATGAAACAATCGA+TGG | 0.617405 | 3:-100339542 | None:intergenic |
| CGATACGCACTGTCAAAGGA+AGG | 0.624920 | 3:+100340294 | MsG0380017754.01.T01:CDS |
| GACATAGTTTAAGGATGACA+TGG | 0.641431 | 3:-100339646 | None:intergenic |
| TAGTAACCATTCGAATGGTG+TGG | 0.644583 | 3:-100339816 | None:intergenic |
| CATGGAGAGACTATGAATTG+CGG | 0.647059 | 3:-100339702 | None:intergenic |
| GGATACTTCTTCCAAACGAG+AGG | 0.650312 | 3:+100340315 | MsG0380017754.01.T01:CDS |
| GGAGATGTAAAAGAATATGG+CGG | 0.664571 | 3:-100339609 | None:intergenic |
| TCATGTGGAGATAACGAGAG+AGG | 0.674618 | 3:-100339898 | None:intergenic |
| ATTGCGGGTAATGGACCCAA+CGG | 0.679144 | 3:-100339686 | None:intergenic |
| GCAACAAAAGTACTCCAACA+TGG | 0.716162 | 3:-100340177 | None:intergenic |
| GGAGATGAGAAACCACCATG+TGG | 0.716994 | 3:-100339588 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTAAAACATTTAAATTTTC+AGG | + | Chr3:100340115-100340134 | MsG0380017754.01.T01:intron | 15.0% |
| !!! | GAAAATTTAAATGTTTTACT+AGG | - | Chr3:100340115-100340134 | None:intergenic | 15.0% |
| !!! | GTAAAACATTTAAATTTTCA+GGG | + | Chr3:100340116-100340135 | MsG0380017754.01.T01:intron | 15.0% |
| !! | TTCTCATAATGTCATATTTA+TGG | + | Chr3:100339990-100340009 | MsG0380017754.01.T01:intron | 20.0% |
| !!! | TCTTAAATGTTTTGATTCTT+TGG | + | Chr3:100340251-100340270 | MsG0380017754.01.T01:CDS | 20.0% |
| ! | ACATGCCAAAAAATATTGTT+AGG | - | Chr3:100339739-100339758 | None:intergenic | 25.0% |
| ! | CATGCCAAAAAATATTGTTA+GGG | - | Chr3:100339738-100339757 | None:intergenic | 25.0% |
| !!! | AATTTTCATATGGTGTTGTT+TGG | + | Chr3:100340139-100340158 | MsG0380017754.01.T01:CDS | 25.0% |
| !!! | ATCTCCCTAACAATATTTTT+TGG | + | Chr3:100339731-100339750 | MsG0380017754.01.T01:CDS | 25.0% |
| !!! | ATTTTCAGGGAATTTTCATA+TGG | + | Chr3:100340129-100340148 | MsG0380017754.01.T01:intron | 25.0% |
| AAACATAGTAACCATTCGAA+TGG | - | Chr3:100339824-100339843 | None:intergenic | 30.0% | |
| ATGTCATCCTTAAACTATGT+CGG | + | Chr3:100339648-100339667 | MsG0380017754.01.T01:CDS | 30.0% | |
| CAAAGGAGAAGCTTAAATAT+TGG | + | Chr3:100339507-100339526 | MsG0380017754.01.T01:CDS | 30.0% | |
| CATAATGTCATATTTATGGC+TGG | + | Chr3:100339994-100340013 | MsG0380017754.01.T01:intron | 30.0% | |
| GATGGAGATGTAAAAGAATA+TGG | - | Chr3:100339615-100339634 | None:intergenic | 30.0% | |
| TGAAAATTGTCCTAATCATG+TGG | - | Chr3:100339916-100339935 | None:intergenic | 30.0% | |
| ! | ATTCTTTTACATCTCCATCA+CGG | + | Chr3:100339616-100339635 | MsG0380017754.01.T01:CDS | 30.0% |
| ! | CTTTTGTTGCATTATTCTAG+AGG | + | Chr3:100340190-100340209 | MsG0380017754.01.T01:CDS | 30.0% |
| GACATAGTTTAAGGATGACA+TGG | - | Chr3:100339649-100339668 | None:intergenic | 35.0% | |
| GGAGATGTAAAAGAATATGG+CGG | - | Chr3:100339612-100339631 | None:intergenic | 35.0% | |
| TGGTTACTATGTTTCCCATT+AGG | + | Chr3:100339830-100339849 | MsG0380017754.01.T01:CDS | 35.0% | |
| TGTTAGGGAGATTAATGACA+TGG | - | Chr3:100339723-100339742 | None:intergenic | 35.0% | |
| TTCAATGCTGGAGTTTACAA+AGG | + | Chr3:100339490-100339509 | MsG0380017754.01.T01:CDS | 35.0% | |
| ! | ATGTAATGGAATTGGAGCAT+GGG | + | Chr3:100340216-100340235 | MsG0380017754.01.T01:CDS | 35.0% |
| ! | TATTCTAGAGGAGGATGTAA+TGG | + | Chr3:100340202-100340221 | MsG0380017754.01.T01:CDS | 35.0% |
| ! | TTGTTGCATTATTCTAGAGG+AGG | + | Chr3:100340193-100340212 | MsG0380017754.01.T01:CDS | 35.0% |
| !! | ACCGATTTTGGACACAAATT+GGG | + | Chr3:100340086-100340105 | MsG0380017754.01.T01:intron | 35.0% |
| !! | TGGTTTGTTCAGTGGTTTAT+GGG | + | Chr3:100340062-100340081 | MsG0380017754.01.T01:intron | 35.0% |
| !! | TTGGTTTGTTCAGTGGTTTA+TGG | + | Chr3:100340061-100340080 | MsG0380017754.01.T01:intron | 35.0% |
| !!! | TACCGATTTTGGACACAAAT+TGG | + | Chr3:100340085-100340104 | MsG0380017754.01.T01:intron | 35.0% |
| ACCGGAATGAAACAATCGAT+GGG | - | Chr3:100339544-100339563 | None:intergenic | 40.0% | |
| AGACTATGAATTGCGGGTAA+TGG | - | Chr3:100339698-100339717 | None:intergenic | 40.0% | |
| ATGGAGAGACTATGAATTGC+GGG | - | Chr3:100339704-100339723 | None:intergenic | 40.0% | |
| CAAAAGAAAACACGACCAGA+GGG | - | Chr3:100339863-100339882 | None:intergenic | 40.0% | |
| CATGGAGAGACTATGAATTG+CGG | - | Chr3:100339705-100339724 | None:intergenic | 40.0% | |
| CTCGTTATCTCCACATGATT+AGG | + | Chr3:100339903-100339922 | MsG0380017754.01.T01:intron | 40.0% | |
| GCCCAATTTGTGTCCAAAAT+CGG | - | Chr3:100340090-100340109 | None:intergenic | 40.0% | |
| GGCTATATTGTTCTCTACGT+TGG | + | Chr3:100340042-100340061 | MsG0380017754.01.T01:intron | 40.0% | |
| GTCACAAACACATTCAATGC+TGG | + | Chr3:100339478-100339497 | MsG0380017754.01.T01:CDS | 40.0% | |
| TAGTAACCATTCGAATGGTG+TGG | - | Chr3:100339819-100339838 | None:intergenic | 40.0% | |
| TTCACAATCGCTTCAAGTGT+TGG | + | Chr3:100340021-100340040 | MsG0380017754.01.T01:intron | 40.0% | |
| ! | ACCCATCGATTGTTTCATTC+CGG | + | Chr3:100339540-100339559 | MsG0380017754.01.T01:CDS | 40.0% |
| ! | AGAGGAGGATGTAATGGAAT+TGG | + | Chr3:100340208-100340227 | MsG0380017754.01.T01:CDS | 40.0% |
| ! | GATGTAATGGAATTGGAGCA+TGG | + | Chr3:100340215-100340234 | MsG0380017754.01.T01:CDS | 40.0% |
| !! | GCAACAAAAGTACTCCAACA+TGG | - | Chr3:100340180-100340199 | None:intergenic | 40.0% |
| !! | GGTGTTGTTTGGTTGCAATT+TGG | + | Chr3:100340150-100340169 | MsG0380017754.01.T01:CDS | 40.0% |
| !!! | TGGTTTATGGGTACCGATTT+TGG | + | Chr3:100340074-100340093 | MsG0380017754.01.T01:intron | 40.0% |
| ACCATTCGAATGGTGTGGTT+CGG | - | Chr3:100339814-100339833 | None:intergenic | 45.0% | |
| ATGTCGATACGCACTGTCAA+AGG | + | Chr3:100340290-100340309 | MsG0380017754.01.T01:CDS | 45.0% | |
| CACCGGAATGAAACAATCGA+TGG | - | Chr3:100339545-100339564 | None:intergenic | 45.0% | |
| CAGAGGGACGAATACCTAAT+GGG | - | Chr3:100339847-100339866 | None:intergenic | 45.0% | |
| CCAAAAGAAAACACGACCAG+AGG | - | Chr3:100339864-100339883 | None:intergenic | 45.0% | |
| GACATGGATAGTTACCGTGA+TGG | - | Chr3:100339633-100339652 | None:intergenic | 45.0% | |
| GCAGTCTCCGACATAGTTTA+AGG | - | Chr3:100339658-100339677 | None:intergenic | 45.0% | |
| GGATACTTCTTCCAAACGAG+AGG | + | Chr3:100340315-100340334 | MsG0380017754.01.T01:CDS | 45.0% | |
| TCATGTGGAGATAACGAGAG+AGG | - | Chr3:100339901-100339920 | None:intergenic | 45.0% | |
| TGACTTAGCATCCTCTCGTT+TGG | - | Chr3:100340329-100340348 | None:intergenic | 45.0% | |
| ! | CATCGATTGTTTCATTCCGG+TGG | + | Chr3:100339543-100339562 | MsG0380017754.01.T01:CDS | 45.0% |
| ! | CCTCTGGTCGTGTTTTCTTT+TGG | + | Chr3:100339861-100339880 | MsG0380017754.01.T01:intron | 45.0% |
| !! | CTCTACGTTGGTTTGTTCAG+TGG | + | Chr3:100340054-100340073 | MsG0380017754.01.T01:intron | 45.0% |
| CCAGAGGGACGAATACCTAA+TGG | - | Chr3:100339848-100339867 | None:intergenic | 50.0% | |
| CCATTAGGTATTCGTCCCTC+TGG | + | Chr3:100339845-100339864 | MsG0380017754.01.T01:intron | 50.0% | |
| CCATTCGAATGGTGTGGTTC+GGG | - | Chr3:100339813-100339832 | None:intergenic | 50.0% | |
| CGATACGCACTGTCAAAGGA+AGG | + | Chr3:100340294-100340313 | MsG0380017754.01.T01:CDS | 50.0% | |
| GGAGATGAGAAACCACCATG+TGG | - | Chr3:100339591-100339610 | None:intergenic | 50.0% | |
| TGCAATTTGGCGTGCCATGT+TGG | + | Chr3:100340163-100340182 | MsG0380017754.01.T01:CDS | 50.0% | |
| ! | GTTTTTCTCTGCCGAAGCTG+AGG | + | Chr3:100339757-100339776 | MsG0380017754.01.T01:CDS | 50.0% |
| !! | ATTGCGGGTAATGGACCCAA+CGG | - | Chr3:100339689-100339708 | None:intergenic | 50.0% |
| AGACTGCGTCCTGTACCGTT+GGG | + | Chr3:100339671-100339690 | MsG0380017754.01.T01:CDS | 55.0% | |
| AGTGTCCCGAACCTCAGCTT+CGG | - | Chr3:100339771-100339790 | None:intergenic | 55.0% | |
| ATGATAGGGCAGGACTCCAC+CGG | - | Chr3:100339562-100339581 | None:intergenic | 55.0% | |
| CCCGAACCACACCATTCGAA+TGG | + | Chr3:100339810-100339829 | MsG0380017754.01.T01:CDS | 55.0% | |
| GTGGAGTCCTGCCCTATCAT+GGG | + | Chr3:100339562-100339581 | MsG0380017754.01.T01:CDS | 55.0% | |
| TCTCTGCCGAAGCTGAGGTT+CGG | + | Chr3:100339762-100339781 | MsG0380017754.01.T01:CDS | 55.0% | |
| TGGAGTCCTGCCCTATCATG+GGG | + | Chr3:100339563-100339582 | MsG0380017754.01.T01:CDS | 55.0% | |
| !! | GGTAATGGACCCAACGGTAC+AGG | - | Chr3:100339683-100339702 | None:intergenic | 55.0% |
| !! | TTCGGGACACTCGTTGGCTT+TGG | + | Chr3:100339780-100339799 | MsG0380017754.01.T01:CDS | 55.0% |
| ACCATGTGGCGCCCCATGAT+AGG | - | Chr3:100339577-100339596 | None:intergenic | 60.0% | |
| CCATGTGGCGCCCCATGATA+GGG | - | Chr3:100339576-100339595 | None:intergenic | 60.0% | |
| CTCTGCCGAAGCTGAGGTTC+GGG | + | Chr3:100339763-100339782 | MsG0380017754.01.T01:CDS | 60.0% | |
| CTGAGGTTCGGGACACTCGT+TGG | + | Chr3:100339774-100339793 | MsG0380017754.01.T01:CDS | 60.0% | |
| GAGACTGCGTCCTGTACCGT+TGG | + | Chr3:100339670-100339689 | MsG0380017754.01.T01:CDS | 60.0% | |
| GGTGGAGTCCTGCCCTATCA+TGG | + | Chr3:100339561-100339580 | MsG0380017754.01.T01:CDS | 60.0% | |
| ! | TATCATGGGGCGCCACATGG+TGG | + | Chr3:100339576-100339595 | MsG0380017754.01.T01:CDS | 60.0% |
| ! | CCCTATCATGGGGCGCCACA+TGG | + | Chr3:100339573-100339592 | MsG0380017754.01.T01:CDS | 65.0% |
| GTGGCGCCCCATGATAGGGC+AGG | - | Chr3:100339572-100339591 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 100339458 | 100340372 | 100339458 | ID=MsG0380017754.01;Name=MsG0380017754.01 |
| Chr3 | mRNA | 100339458 | 100340372 | 100339458 | ID=MsG0380017754.01.T01;Parent=MsG0380017754.01;Name=MsG0380017754.01.T01;_AED=0.36;_eAED=0.36;_QI=0|0|0|1|0|0|2|0|209 |
| Chr3 | exon | 100339458 | 100339851 | 100339458 | ID=MsG0380017754.01.T01:exon:35817;Parent=MsG0380017754.01.T01 |
| Chr3 | exon | 100340137 | 100340372 | 100340137 | ID=MsG0380017754.01.T01:exon:35818;Parent=MsG0380017754.01.T01 |
| Chr3 | CDS | 100339458 | 100339851 | 100339458 | ID=MsG0380017754.01.T01:cds;Parent=MsG0380017754.01.T01 |
| Chr3 | CDS | 100340137 | 100340372 | 100340137 | ID=MsG0380017754.01.T01:cds;Parent=MsG0380017754.01.T01 |
| Chr3 | mRNA | 100339494 | 100340372 | 100339494 | ID=MsG0380017754.01.T02;Parent=MsG0380017754.01;Name=MsG0380017754.01.T02;_AED=0.30;_eAED=0.30;_QI=0|-1|0|1|-1|0|1|0|292 |
| Chr3 | exon | 100339494 | 100340372 | 100339494 | ID=MsG0380017754.01.T02:exon:35819;Parent=MsG0380017754.01.T02 |
| Chr3 | CDS | 100339494 | 100340372 | 100339494 | ID=MsG0380017754.01.T02:cds;Parent=MsG0380017754.01.T02 |
| Chr3 | mRNA | 100339722 | 100340372 | 100339722 | ID=MsG0380017754.01.T03;Parent=MsG0380017754.01;Name=MsG0380017754.01.T03;_AED=0.35;_eAED=0.35;_QI=0|-1|0|1|-1|0|1|0|216 |
| Chr3 | exon | 100339722 | 100340372 | 100339722 | ID=MsG0380017754.01.T03:exon:35820;Parent=MsG0380017754.01.T03 |
| Chr3 | CDS | 100339722 | 100340372 | 100339722 | ID=MsG0380017754.01.T03:cds;Parent=MsG0380017754.01.T03 |
| Gene Sequence |
| Protein sequence |
