AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040681.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040681.01.T02 MTR_3g096050 57.925 347 145 1 2 348 13 358 1.09e-155 441
MsG0780040681.01.T02 MTR_3g096070 54.179 347 135 2 2 348 13 335 2.59e-141 404
MsG0780040681.01.T02 MTR_2g072790 51.445 346 166 2 3 348 11 354 2.23e-136 392
MsG0780040681.01.T02 MTR_3g096050 61.134 247 96 0 2 248 13 259 3.61e-111 325
MsG0780040681.01.T02 MTR_1g036490 37.609 343 195 13 18 348 35 370 5.32e-62 202
MsG0780040681.01.T02 MTR_3g092900 34.104 346 219 6 3 344 18 358 1.39e-61 201
MsG0780040681.01.T02 MTR_1g036510 38.012 342 195 10 18 348 49 384 6.46e-60 197
MsG0780040681.01.T02 MTR_1g036460 36.994 346 201 11 4 339 21 359 2.51e-59 196
MsG0780040681.01.T02 MTR_2g055940 35.244 349 194 9 2 334 16 348 6.21e-59 194
MsG0780040681.01.T02 MTR_7g011990 35.756 344 185 10 6 332 26 350 1.08e-58 194
MsG0780040681.01.T02 MTR_7g118320 33.636 330 209 5 9 332 21 346 1.96e-58 193
MsG0780040681.01.T02 MTR_7g011900 35.736 333 203 6 6 332 26 353 2.10e-58 193
MsG0780040681.01.T02 MTR_5g098170 33.043 345 222 7 9 348 23 363 3.54e-57 190
MsG0780040681.01.T02 MTR_7g012070 35.952 331 196 8 15 334 35 360 3.85e-57 190
MsG0780040681.01.T02 MTR_7g012090 35.613 351 184 11 6 332 26 358 5.30e-57 189
MsG0780040681.01.T02 MTR_7g012020 35.135 333 205 6 6 332 25 352 1.57e-56 188
MsG0780040681.01.T02 MTR_1g096310 35.905 337 203 7 4 332 24 355 1.88e-56 188
MsG0780040681.01.T02 MTR_0591s0010 33.639 327 207 5 9 329 36 358 7.25e-56 187
MsG0780040681.01.T02 MTR_7g118300 31.871 342 226 5 10 348 38 375 1.47e-55 186
MsG0780040681.01.T02 MTR_8g068750 31.818 330 215 5 9 332 36 361 4.33e-55 185
MsG0780040681.01.T02 MTR_7g012040 34.731 334 208 6 6 334 25 353 7.05e-55 184
MsG0780040681.01.T02 MTR_8g068690 32.628 331 213 5 9 333 35 361 1.44e-53 181
MsG0780040681.01.T02 MTR_8g068870 30.814 344 228 5 11 348 24 363 3.85e-51 174
MsG0780040681.01.T02 MTR_6g078850 31.611 329 213 6 9 329 40 364 1.39e-48 171
MsG0780040681.01.T02 MTR_8g024160 35.521 259 157 5 85 337 69 323 2.29e-48 166
MsG0780040681.01.T02 MTR_3g021440 33.437 323 200 7 15 330 37 351 4.55e-45 158
MsG0780040681.01.T02 MTR_3g021430 32.840 338 208 8 19 345 28 357 1.20e-43 154
MsG0780040681.01.T02 MTR_8g068570 30.573 314 181 6 9 316 36 318 1.56e-43 153
MsG0780040681.01.T02 MTR_8g068730 29.091 330 192 7 9 332 36 329 1.26e-41 149
MsG0780040681.01.T02 MTR_0017s0100 31.532 333 211 10 20 345 43 365 6.02e-40 145
MsG0780040681.01.T02 MTR_8g068690 32.806 253 162 3 9 255 35 285 1.20e-39 142
MsG0780040681.01.T02 MTR_7g012020 34.630 257 161 4 6 256 25 280 1.39e-39 142
MsG0780040681.01.T02 MTR_1g050220 33.645 321 150 11 18 329 18 284 4.08e-39 140
MsG0780040681.01.T02 MTR_0079s0070 28.701 331 223 9 20 345 9 331 4.74e-36 133
MsG0780040681.01.T02 MTR_4g038440 28.701 331 223 9 20 345 43 365 1.05e-35 133
MsG0780040681.01.T02 MTR_1g036510 38.750 240 135 7 18 248 49 285 2.12e-35 131
MsG0780040681.01.T02 MTR_8g068600 32.174 230 148 3 26 249 27 254 1.75e-33 125
MsG0780040681.01.T02 MTR_5g074600 29.245 318 210 10 20 330 32 341 1.41e-32 125
MsG0780040681.01.T02 MTR_7g024520 27.381 336 219 9 18 345 29 347 6.76e-31 120
MsG0780040681.01.T02 MTR_7g012020 33.040 227 146 3 6 227 25 250 1.40e-30 117
MsG0780040681.01.T02 MTR_1g076940 26.471 340 227 10 20 347 32 360 5.87e-30 117
MsG0780040681.01.T02 MTR_8g068740 28.794 257 143 5 9 259 36 258 7.48e-29 113
MsG0780040681.01.T02 MTR_4g088345 26.393 341 225 10 18 347 30 355 8.04e-29 114
MsG0780040681.01.T02 MTR_4g088340 26.393 341 225 10 18 347 7 332 1.03e-28 114
MsG0780040681.01.T02 MTR_7g014570 27.492 331 226 8 20 347 32 351 1.71e-28 113
MsG0780040681.01.T02 MTR_3g083620 31.858 226 150 4 121 344 134 357 1.51e-27 111
MsG0780040681.01.T02 MTR_4g079160 27.893 337 217 11 20 345 31 352 2.85e-27 110
MsG0780040681.01.T02 MTR_1g036510 37.569 181 105 5 53 227 86 264 3.72e-27 108
MsG0780040681.01.T02 MTR_5g074680 27.987 318 212 11 20 329 33 341 1.16e-26 108
MsG0780040681.01.T02 MTR_5g074610 27.215 316 190 9 20 330 28 308 1.55e-26 107
MsG0780040681.01.T02 MTR_5g074540 27.215 316 201 9 20 330 32 323 3.62e-26 107
MsG0780040681.01.T02 MTR_4g088200 27.515 338 226 11 20 347 32 360 1.31e-25 105
MsG0780040681.01.T02 MTR_5g074580 26.250 320 217 11 20 330 33 342 1.47e-25 105
MsG0780040681.01.T02 MTR_7g014510 27.083 336 226 10 20 347 32 356 3.03e-25 104
MsG0780040681.01.T02 MTR_7g024500 26.409 337 221 10 18 345 29 347 8.24e-25 103
MsG0780040681.01.T02 MTR_8g068620 50.538 93 45 1 156 248 19 110 1.32e-24 97.1
MsG0780040681.01.T02 MTR_4g033200 27.759 299 199 9 20 307 32 324 2.99e-24 102
MsG0780040681.01.T02 MTR_4g033015 27.759 299 199 9 20 307 32 324 1.04e-23 100
MsG0780040681.01.T02 MTR_4g038440 28.879 232 158 5 20 248 43 270 3.19e-22 94.7
MsG0780040681.01.T02 MTR_4g033150 26.421 299 203 9 20 307 32 324 6.70e-21 92.8
MsG0780040681.01.T02 MTR_4g088190 27.536 345 220 11 20 347 32 363 1.31e-20 92.0
MsG0780040681.01.T02 MTR_4g033170 28.289 304 203 10 13 308 23 319 7.83e-18 84.0
MsG0780040681.01.T02 MTR_4g033085 28.800 250 167 8 13 257 23 266 1.76e-15 77.0
MsG0780040681.01.T02 MTR_1g076930 24.681 235 169 6 18 248 7 237 1.90e-15 75.5
MsG0780040681.01.T01 MTR_3g096050 57.925 347 145 1 2 348 13 358 1.09e-155 441
MsG0780040681.01.T01 MTR_3g096070 54.179 347 135 2 2 348 13 335 2.59e-141 404
MsG0780040681.01.T01 MTR_2g072790 51.445 346 166 2 3 348 11 354 2.23e-136 392
MsG0780040681.01.T01 MTR_3g096050 61.134 247 96 0 2 248 13 259 3.61e-111 325
MsG0780040681.01.T01 MTR_1g036490 37.609 343 195 13 18 348 35 370 5.32e-62 202
MsG0780040681.01.T01 MTR_3g092900 34.104 346 219 6 3 344 18 358 1.39e-61 201
MsG0780040681.01.T01 MTR_1g036510 38.012 342 195 10 18 348 49 384 6.46e-60 197
MsG0780040681.01.T01 MTR_1g036460 36.994 346 201 11 4 339 21 359 2.51e-59 196
MsG0780040681.01.T01 MTR_2g055940 35.244 349 194 9 2 334 16 348 6.21e-59 194
MsG0780040681.01.T01 MTR_7g011990 35.756 344 185 10 6 332 26 350 1.08e-58 194
MsG0780040681.01.T01 MTR_7g118320 33.636 330 209 5 9 332 21 346 1.96e-58 193
MsG0780040681.01.T01 MTR_7g011900 35.736 333 203 6 6 332 26 353 2.10e-58 193
MsG0780040681.01.T01 MTR_5g098170 33.043 345 222 7 9 348 23 363 3.54e-57 190
MsG0780040681.01.T01 MTR_7g012070 35.952 331 196 8 15 334 35 360 3.85e-57 190
MsG0780040681.01.T01 MTR_7g012090 35.613 351 184 11 6 332 26 358 5.30e-57 189
MsG0780040681.01.T01 MTR_7g012020 35.135 333 205 6 6 332 25 352 1.57e-56 188
MsG0780040681.01.T01 MTR_1g096310 35.905 337 203 7 4 332 24 355 1.88e-56 188
MsG0780040681.01.T01 MTR_0591s0010 33.639 327 207 5 9 329 36 358 7.25e-56 187
MsG0780040681.01.T01 MTR_7g118300 31.871 342 226 5 10 348 38 375 1.47e-55 186
MsG0780040681.01.T01 MTR_8g068750 31.818 330 215 5 9 332 36 361 4.33e-55 185
MsG0780040681.01.T01 MTR_7g012040 34.731 334 208 6 6 334 25 353 7.05e-55 184
MsG0780040681.01.T01 MTR_8g068690 32.628 331 213 5 9 333 35 361 1.44e-53 181
MsG0780040681.01.T01 MTR_8g068870 30.814 344 228 5 11 348 24 363 3.85e-51 174
MsG0780040681.01.T01 MTR_6g078850 31.611 329 213 6 9 329 40 364 1.39e-48 171
MsG0780040681.01.T01 MTR_8g024160 35.521 259 157 5 85 337 69 323 2.29e-48 166
MsG0780040681.01.T01 MTR_3g021440 33.437 323 200 7 15 330 37 351 4.55e-45 158
MsG0780040681.01.T01 MTR_3g021430 32.840 338 208 8 19 345 28 357 1.20e-43 154
MsG0780040681.01.T01 MTR_8g068570 30.573 314 181 6 9 316 36 318 1.56e-43 153
MsG0780040681.01.T01 MTR_8g068730 29.091 330 192 7 9 332 36 329 1.26e-41 149
MsG0780040681.01.T01 MTR_0017s0100 31.532 333 211 10 20 345 43 365 6.02e-40 145
MsG0780040681.01.T01 MTR_8g068690 32.806 253 162 3 9 255 35 285 1.20e-39 142
MsG0780040681.01.T01 MTR_7g012020 34.630 257 161 4 6 256 25 280 1.39e-39 142
MsG0780040681.01.T01 MTR_1g050220 33.645 321 150 11 18 329 18 284 4.08e-39 140
MsG0780040681.01.T01 MTR_0079s0070 28.701 331 223 9 20 345 9 331 4.74e-36 133
MsG0780040681.01.T01 MTR_4g038440 28.701 331 223 9 20 345 43 365 1.05e-35 133
MsG0780040681.01.T01 MTR_1g036510 38.750 240 135 7 18 248 49 285 2.12e-35 131
MsG0780040681.01.T01 MTR_8g068600 32.174 230 148 3 26 249 27 254 1.75e-33 125
MsG0780040681.01.T01 MTR_5g074600 29.245 318 210 10 20 330 32 341 1.41e-32 125
MsG0780040681.01.T01 MTR_7g024520 27.381 336 219 9 18 345 29 347 6.76e-31 120
MsG0780040681.01.T01 MTR_7g012020 33.040 227 146 3 6 227 25 250 1.40e-30 117
MsG0780040681.01.T01 MTR_1g076940 26.471 340 227 10 20 347 32 360 5.87e-30 117
MsG0780040681.01.T01 MTR_8g068740 28.794 257 143 5 9 259 36 258 7.48e-29 113
MsG0780040681.01.T01 MTR_4g088345 26.393 341 225 10 18 347 30 355 8.04e-29 114
MsG0780040681.01.T01 MTR_4g088340 26.393 341 225 10 18 347 7 332 1.03e-28 114
MsG0780040681.01.T01 MTR_7g014570 27.492 331 226 8 20 347 32 351 1.71e-28 113
MsG0780040681.01.T01 MTR_3g083620 31.858 226 150 4 121 344 134 357 1.51e-27 111
MsG0780040681.01.T01 MTR_4g079160 27.893 337 217 11 20 345 31 352 2.85e-27 110
MsG0780040681.01.T01 MTR_1g036510 37.569 181 105 5 53 227 86 264 3.72e-27 108
MsG0780040681.01.T01 MTR_5g074680 27.987 318 212 11 20 329 33 341 1.16e-26 108
MsG0780040681.01.T01 MTR_5g074610 27.215 316 190 9 20 330 28 308 1.55e-26 107
MsG0780040681.01.T01 MTR_5g074540 27.215 316 201 9 20 330 32 323 3.62e-26 107
MsG0780040681.01.T01 MTR_4g088200 27.515 338 226 11 20 347 32 360 1.31e-25 105
MsG0780040681.01.T01 MTR_5g074580 26.250 320 217 11 20 330 33 342 1.47e-25 105
MsG0780040681.01.T01 MTR_7g014510 27.083 336 226 10 20 347 32 356 3.03e-25 104
MsG0780040681.01.T01 MTR_7g024500 26.409 337 221 10 18 345 29 347 8.24e-25 103
MsG0780040681.01.T01 MTR_8g068620 50.538 93 45 1 156 248 19 110 1.32e-24 97.1
MsG0780040681.01.T01 MTR_4g033200 27.759 299 199 9 20 307 32 324 2.99e-24 102
MsG0780040681.01.T01 MTR_4g033015 27.759 299 199 9 20 307 32 324 1.04e-23 100
MsG0780040681.01.T01 MTR_4g038440 28.879 232 158 5 20 248 43 270 3.19e-22 94.7
MsG0780040681.01.T01 MTR_4g033150 26.421 299 203 9 20 307 32 324 6.70e-21 92.8
MsG0780040681.01.T01 MTR_4g088190 27.536 345 220 11 20 347 32 363 1.31e-20 92.0
MsG0780040681.01.T01 MTR_4g033170 28.289 304 203 10 13 308 23 319 7.83e-18 84.0
MsG0780040681.01.T01 MTR_4g033085 28.800 250 167 8 13 257 23 266 1.76e-15 77.0
MsG0780040681.01.T01 MTR_1g076930 24.681 235 169 6 18 248 7 237 1.90e-15 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040681.01.T02 AT3G53140 50.142 351 170 2 2 348 10 359 3.23e-130 377
MsG0780040681.01.T02 AT5G54160 37.135 342 204 8 3 340 18 352 8.98e-67 214
MsG0780040681.01.T02 AT1G51990 35.764 288 176 6 62 344 74 357 3.13e-56 187
MsG0780040681.01.T02 AT1G51990 35.417 288 177 6 62 344 74 357 5.85e-55 184
MsG0780040681.01.T02 AT1G33030 32.659 346 221 7 9 348 11 350 2.62e-50 171
MsG0780040681.01.T02 AT1G77520 30.484 351 228 8 10 348 35 381 1.85e-47 165
MsG0780040681.01.T02 AT5G53810 33.043 345 212 12 18 348 39 378 2.06e-40 146
MsG0780040681.01.T02 AT1G77530 32.768 354 206 13 15 348 40 381 2.56e-36 135
MsG0780040681.01.T02 AT1G21130 31.897 348 222 9 6 344 27 368 2.63e-36 135
MsG0780040681.01.T02 AT1G21100 31.609 348 223 9 6 344 27 368 3.10e-36 135
MsG0780040681.01.T02 AT1G63140 29.971 347 229 7 13 348 38 381 3.61e-35 132
MsG0780040681.01.T02 AT1G63140 29.971 347 229 7 13 348 58 401 3.95e-35 132
MsG0780040681.01.T02 AT1G21110 31.609 348 223 9 6 344 27 368 8.65e-35 131
MsG0780040681.01.T02 AT1G21120 31.322 348 224 9 6 344 27 368 2.09e-34 130
MsG0780040681.01.T02 AT1G21120 31.322 348 224 9 6 344 75 416 6.28e-34 129
MsG0780040681.01.T02 AT1G76790 31.034 348 219 11 6 340 17 356 2.69e-33 127
MsG0780040681.01.T02 AT5G37170 33.766 231 145 7 123 348 7 234 8.60e-33 122
MsG0780040681.01.T02 AT5G37170 30.479 292 169 9 62 348 72 334 9.95e-33 124
MsG0780040681.01.T02 AT5G37170 37.989 179 106 5 172 348 11 186 7.11e-31 115
MsG0780040681.01.T02 AT1G62900 34.715 193 124 2 156 348 15 205 1.15e-28 110
MsG0780040681.01.T02 AT1G33030 32.296 257 150 7 9 252 11 256 3.90e-27 108
MsG0780040681.01.T02 AT1G33030 32.411 253 147 7 9 248 11 252 4.63e-26 105
MsG0780040681.01.T02 AT4G35160 28.190 337 216 9 25 344 50 377 1.95e-25 105
MsG0780040681.01.T02 AT1G21130 34.524 252 152 7 6 248 27 274 1.35e-22 96.7
MsG0780040681.01.T02 AT4G35150 26.979 341 192 11 2 331 13 307 3.38e-22 95.9
MsG0780040681.01.T02 AT1G63140 31.174 247 157 6 13 248 58 302 1.51e-20 90.9
MsG0780040681.01.T02 AT1G63140 29.864 221 142 6 13 222 58 276 1.53e-13 70.5
MsG0780040681.01.T02 AT1G77530 32.174 230 131 9 15 227 40 261 1.21e-12 67.8
MsG0780040681.01.T01 AT3G53140 50.142 351 170 2 2 348 10 359 3.23e-130 377
MsG0780040681.01.T01 AT5G54160 37.135 342 204 8 3 340 18 352 8.98e-67 214
MsG0780040681.01.T01 AT1G51990 35.764 288 176 6 62 344 74 357 3.13e-56 187
MsG0780040681.01.T01 AT1G51990 35.417 288 177 6 62 344 74 357 5.85e-55 184
MsG0780040681.01.T01 AT1G33030 32.659 346 221 7 9 348 11 350 2.62e-50 171
MsG0780040681.01.T01 AT1G77520 30.484 351 228 8 10 348 35 381 1.85e-47 165
MsG0780040681.01.T01 AT5G53810 33.043 345 212 12 18 348 39 378 2.06e-40 146
MsG0780040681.01.T01 AT1G77530 32.768 354 206 13 15 348 40 381 2.56e-36 135
MsG0780040681.01.T01 AT1G21130 31.897 348 222 9 6 344 27 368 2.63e-36 135
MsG0780040681.01.T01 AT1G21100 31.609 348 223 9 6 344 27 368 3.10e-36 135
MsG0780040681.01.T01 AT1G63140 29.971 347 229 7 13 348 38 381 3.61e-35 132
MsG0780040681.01.T01 AT1G63140 29.971 347 229 7 13 348 58 401 3.95e-35 132
MsG0780040681.01.T01 AT1G21110 31.609 348 223 9 6 344 27 368 8.65e-35 131
MsG0780040681.01.T01 AT1G21120 31.322 348 224 9 6 344 27 368 2.09e-34 130
MsG0780040681.01.T01 AT1G21120 31.322 348 224 9 6 344 75 416 6.28e-34 129
MsG0780040681.01.T01 AT1G76790 31.034 348 219 11 6 340 17 356 2.69e-33 127
MsG0780040681.01.T01 AT5G37170 33.766 231 145 7 123 348 7 234 8.60e-33 122
MsG0780040681.01.T01 AT5G37170 30.479 292 169 9 62 348 72 334 9.95e-33 124
MsG0780040681.01.T01 AT5G37170 37.989 179 106 5 172 348 11 186 7.11e-31 115
MsG0780040681.01.T01 AT1G62900 34.715 193 124 2 156 348 15 205 1.15e-28 110
MsG0780040681.01.T01 AT1G33030 32.296 257 150 7 9 252 11 256 3.90e-27 108
MsG0780040681.01.T01 AT1G33030 32.411 253 147 7 9 248 11 252 4.63e-26 105
MsG0780040681.01.T01 AT4G35160 28.190 337 216 9 25 344 50 377 1.95e-25 105
MsG0780040681.01.T01 AT1G21130 34.524 252 152 7 6 248 27 274 1.35e-22 96.7
MsG0780040681.01.T01 AT4G35150 26.979 341 192 11 2 331 13 307 3.38e-22 95.9
MsG0780040681.01.T01 AT1G63140 31.174 247 157 6 13 248 58 302 1.51e-20 90.9
MsG0780040681.01.T01 AT1G63140 29.864 221 142 6 13 222 58 276 1.53e-13 70.5
MsG0780040681.01.T01 AT1G77530 32.174 230 131 9 15 227 40 261 1.21e-12 67.8

Find 46 sgRNAs with CRISPR-Local

Find 475 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCTTCCTTTGTTGAAAA+TGG 0.201432 7:+81092096 None:intergenic
CCAGAAGCTACAGCTGGTTT+AGG 0.284873 7:+81097290 None:intergenic
TCTGCTTCCCTTCCTCCGTT+TGG 0.308377 7:+81092034 None:intergenic
CTGCTTCCCTTCCTCCGTTT+GGG 0.324224 7:+81092035 None:intergenic
GGACTTAGCATTCATCTTCC+TGG 0.334301 7:+81097313 None:intergenic
CAGAAGCTACAGCTGGTTTA+GGG 0.334651 7:+81097291 None:intergenic
TATGTCGGCTTCCGAGATTT+TGG 0.350091 7:-81092068 MsG0780040681.01.T01:CDS
AAGGATAACGAAAACTTGTT+TGG 0.350312 7:+81092241 None:intergenic
AAGAAGGGACACTCATTAGA+TGG 0.354636 7:+81092155 None:intergenic
CCTTTGTTGAAAATGGTATT+CGG 0.362610 7:+81092103 None:intergenic
CGGAACATCTAGTTCAATTA+CGG 0.368181 7:+81092123 None:intergenic
CCTAAACCAGCTGTAGCTTC+TGG 0.391645 7:-81097290 MsG0780040681.01.T01:five_prime_UTR
TGTTAGAAGTTGAAAGTAGA+AGG 0.393308 7:+81092222 None:intergenic
ACAACCTGAGCATACGTTCC+AGG 0.411672 7:+81092008 None:intergenic
CACATTTAAAGAAGAAAGGC+TGG 0.438388 7:-81097342 None:intergenic
ACGTATGCTCAGGTTGTTAA+CGG 0.445131 7:-81092002 MsG0780040681.01.T01:CDS
TTGGCAATTGTTCGCCCAAA+CGG 0.469424 7:-81092049 MsG0780040681.01.T01:CDS
TGGTGGTGTTGAAGCATGTA+AGG 0.478628 7:+81091872 None:intergenic
AAACTTGTTTGGATGTAAGA+AGG 0.478710 7:+81092252 None:intergenic
AACGGCTTACGATATCTTTG+AGG 0.480985 7:-81091984 MsG0780040681.01.T01:CDS
GAGGAGCACTTGATGAGTAA+TGG 0.500457 7:-81091965 MsG0780040681.01.T01:CDS
ATTACGGCAACTAGAGAAGA+AGG 0.503424 7:+81092139 None:intergenic
TTGTTCGCCCAAACGGAGGA+AGG 0.513950 7:-81092042 MsG0780040681.01.T01:CDS
ACTACACATTTAAAGAAGAA+AGG 0.519813 7:-81097346 None:intergenic
AAAGTTCTCACTTGCAGAGG+TGG 0.525549 7:-81091936 MsG0780040681.01.T01:CDS
TCTCGGAAGCCGACATAGGA+AGG 0.542283 7:+81092074 None:intergenic
GCGAACAATTGCCAAAATCT+CGG 0.548219 7:+81092057 None:intergenic
AAAATCTCGGAAGCCGACAT+AGG 0.549653 7:+81092070 None:intergenic
CAGCAGTGGTTGAAAACATT+CGG 0.549722 7:-81092351 MsG0780040681.01.T01:intron
AGAAGGGACACTCATTAGAT+GGG 0.568213 7:+81092156 None:intergenic
AGGAAGGGAAGCAGATAACC+TGG 0.579867 7:-81092026 MsG0780040681.01.T01:CDS
AGGAAGCAACCTTCCTATGT+CGG 0.584154 7:-81092083 MsG0780040681.01.T01:CDS
ATAACCTGGAACGTATGCTC+AGG 0.589626 7:-81092012 MsG0780040681.01.T01:CDS
TGTTCGCCCAAACGGAGGAA+GGG 0.595229 7:-81092041 MsG0780040681.01.T01:CDS
TAGAAAGTTCTCACTTGCAG+AGG 0.598594 7:-81091939 MsG0780040681.01.T01:CDS
AACACACCAGAAGCTACAGC+TGG 0.600846 7:+81097284 None:intergenic
TTACATGCTTCAACACCACC+AGG 0.609500 7:-81091870 MsG0780040681.01.T01:intron
ATTTGAAAATGAGCAAAGCA+AGG 0.609873 7:-81092198 MsG0780040681.01.T01:exon
AGAAGCTACAGCTGGTTTAG+GGG 0.614018 7:+81097292 None:intergenic
AAGTTCTCACTTGCAGAGGT+GGG 0.615623 7:-81091935 MsG0780040681.01.T01:CDS
TCTCTTGCTGAAGATGAAGA+CGG 0.627359 7:-81091908 MsG0780040681.01.T01:CDS
GCAATTGTTCGCCCAAACGG+AGG 0.656478 7:-81092046 MsG0780040681.01.T01:CDS
AATAATGTGATGTGCAGCAG+TGG 0.659838 7:-81092365 MsG0780040681.01.T01:intron
GGTGGTGTTGAAGCATGTAA+GGG 0.663090 7:+81091873 None:intergenic
TTACGGCAACTAGAGAAGAA+GGG 0.699895 7:+81092140 None:intergenic
GTGGTGTTGAAGCATGTAAG+GGG 0.700082 7:+81091874 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAAAATTAAAAATTA+AGG - Chr7:81090393-81090412 MsG0780040681.01.T01:CDS 0.0%
!! AAATTAAAATTAAAAATTAA+GGG - Chr7:81090394-81090413 MsG0780040681.01.T01:CDS 0.0%
!! AATTATAATAATAGATAGAT+TGG - Chr7:81092239-81092258 MsG0780040681.01.T01:five_prime_UTR 10.0%
!! ATAAAGAGTTTAATATTTAT+GGG + Chr7:81090879-81090898 None:intergenic 10.0%
!! ATTATTATAATTACAAATGA+AGG + Chr7:81092231-81092250 None:intergenic 10.0%
!! GAATAAATTAAAAAAAATTG+AGG + Chr7:81097270-81097289 None:intergenic 10.0%
!! TAACATTGTAAAAAAATATA+TGG - Chr7:81094391-81094410 MsG0780040681.01.T01:intron 10.0%
!! TATAAAGAGTTTAATATTTA+TGG + Chr7:81090880-81090899 None:intergenic 10.0%
!! TATATATATATATATGTAGT+TGG - Chr7:81094699-81094718 MsG0780040681.01.T01:intron 10.0%
!! TGATAAAATCATAAAATATT+GGG - Chr7:81092756-81092775 MsG0780040681.01.T01:intron 10.0%
!! TGTAAATTTAATGATAAATA+AGG - Chr7:81090629-81090648 MsG0780040681.01.T01:intron 10.0%
!! TTGATAAAATCATAAAATAT+TGG - Chr7:81092755-81092774 MsG0780040681.01.T01:intron 10.0%
!!! AAAAAAAATTCTTCAATTTT+TGG - Chr7:81092634-81092653 MsG0780040681.01.T01:intron 10.0%
!!! ATAGTTAGTTTTTTATTTAT+CGG - Chr7:81092316-81092335 MsG0780040681.01.T01:intron 10.0%
!!! GGTTATTATTATTATTTTTT+CGG - Chr7:81095908-81095927 MsG0780040681.01.T01:intron 10.0%
!!! GTATTTTAAATATTTTTACA+TGG - Chr7:81092390-81092409 MsG0780040681.01.T01:intron 10.0%
!!! TAATATATGATTTTTTTTTG+GGG + Chr7:81093188-81093207 None:intergenic 10.0%
!!! TGATTATAAATAAACAATTT+TGG + Chr7:81090945-81090964 None:intergenic 10.0%
!!! TTTTTTGTTTTATAAAATTG+AGG + Chr7:81092857-81092876 None:intergenic 10.0%
!!! TTTTTTTTTTTTTGAAAGAA+GGG - Chr7:81091470-81091489 MsG0780040681.01.T01:CDS 10.0%
!!! TTTTTTTTTTTTTTGAAAGA+AGG - Chr7:81091469-81091488 MsG0780040681.01.T01:CDS 10.0%
!! AAAACCAAAATAAGATTATA+TGG + Chr7:81096870-81096889 None:intergenic 15.0%
!! AAAATATTTGCAAGTATATA+TGG + Chr7:81096280-81096299 None:intergenic 15.0%
!! AAAATCATATATTATATGCA+TGG - Chr7:81093194-81093213 MsG0780040681.01.T01:intron 15.0%
!! AAACTAATCAATAGTTAATA+TGG - Chr7:81097112-81097131 MsG0780040681.01.T01:intron 15.0%
!! AAAGTGGAATATATTATATT+GGG + Chr7:81092088-81092107 None:intergenic 15.0%
!! AAATATCCTTTATTAATTAG+TGG + Chr7:81094159-81094178 None:intergenic 15.0%
!! AATAGTTAATATGGATAATT+TGG - Chr7:81097121-81097140 MsG0780040681.01.T01:intron 15.0%
!! AATTAATTAACATGTTTAGA+AGG + Chr7:81093583-81093602 None:intergenic 15.0%
!! AGATATTAATTCAAAAGAAA+AGG - Chr7:81093323-81093342 MsG0780040681.01.T01:intron 15.0%
!! ATCAAATGTTTCTTATAAAT+AGG + Chr7:81093733-81093752 None:intergenic 15.0%
!! ATCATTTATGCAATAAATAA+AGG + Chr7:81093758-81093777 None:intergenic 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + Chr7:81092047-81092066 None:intergenic 15.0%
!! CGAAATTTAATATATTTCAA+AGG + Chr7:81092602-81092621 None:intergenic 15.0%
!! GATACTAATAAATTAATTGA+AGG + Chr7:81090346-81090365 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + Chr7:81092048-81092067 None:intergenic 15.0%
!! TGTAAAACAACTTATAATTT+GGG + Chr7:81094045-81094064 None:intergenic 15.0%
!! TTCAAAATGTCATATAATTT+AGG - Chr7:81094248-81094267 MsG0780040681.01.T01:intron 15.0%
!! TTGTAAAACAACTTATAATT+TGG + Chr7:81094046-81094065 None:intergenic 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG + Chr7:81092112-81092131 None:intergenic 15.0%
!!! AAGTGTTGTTAATTTTTTTA+GGG - Chr7:81095957-81095976 MsG0780040681.01.T01:intron 15.0%
!!! ATCAAAGTTTTCTTATAAAT+AGG - Chr7:81093834-81093853 MsG0780040681.01.T01:intron 15.0%
!!! GTATATTTTTTAACTCAATA+GGG - Chr7:81091517-81091536 MsG0780040681.01.T01:CDS 15.0%
!!! TAAAAATTCGTTTTTACAAA+AGG - Chr7:81095870-81095889 MsG0780040681.01.T01:intron 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG + Chr7:81092113-81092132 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + Chr7:81097098-81097117 None:intergenic 15.0%
!!! TATTTATAATCAAGTTGTTT+GGG - Chr7:81090953-81090972 MsG0780040681.01.T01:intron 15.0%
!!! TTAAAAATTAAGGGTATTTT+AGG - Chr7:81090403-81090422 MsG0780040681.01.T01:CDS 15.0%
!!! TTATTTATAATCAAGTTGTT+TGG - Chr7:81090952-81090971 MsG0780040681.01.T01:intron 15.0%
!!! TTTCAATTTAAATCGATTTT+AGG + Chr7:81094811-81094830 None:intergenic 15.0%
!!! TTTTCTGTTTATTTAAACTA+CGG + Chr7:81094626-81094645 None:intergenic 15.0%
!!! TTTTTTTTTTTTGAAAGAAG+GGG - Chr7:81091471-81091490 MsG0780040681.01.T01:CDS 15.0%
!! AAACATCAAAAAAAAAGGAA+TGG - Chr7:81090721-81090740 MsG0780040681.01.T01:CDS 20.0%
!! AAAGAAAAAGTGATATTTGA+TGG - Chr7:81091664-81091683 MsG0780040681.01.T01:CDS 20.0%
!! AATTAAAAAAAATTGAGGTG+TGG + Chr7:81097265-81097284 None:intergenic 20.0%
!! ACAACTACTATAATAGTTTA+TGG + Chr7:81090591-81090610 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + Chr7:81097035-81097054 None:intergenic 20.0%
!! ATACACTTATACTTAAAAGT+AGG + Chr7:81096212-81096231 None:intergenic 20.0%
!! ATTAAAAAAAATTGAGGTGT+GGG + Chr7:81097264-81097283 None:intergenic 20.0%
!! CATAATCATATTGCATATAT+AGG - Chr7:81096318-81096337 MsG0780040681.01.T01:intron 20.0%
!! CTTTATTAATTAGTGGTATA+GGG + Chr7:81094152-81094171 None:intergenic 20.0%
!! GAAAGTGGAATATATTATAT+TGG + Chr7:81092089-81092108 None:intergenic 20.0%
!! TACACTTATACTTAAAAGTA+GGG + Chr7:81096211-81096230 None:intergenic 20.0%
!! TGCTAAAACATCAAAAAAAA+AGG - Chr7:81090716-81090735 MsG0780040681.01.T01:CDS 20.0%
!! TTTACACACATATTAAGAAA+TGG + Chr7:81097178-81097197 None:intergenic 20.0%
!!! AAGATATCTTTTATTACGTA+TGG - Chr7:81091495-81091514 MsG0780040681.01.T01:CDS 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG + Chr7:81092111-81092130 None:intergenic 20.0%
!!! AGAATAATTTTTATTCCCTT+TGG - Chr7:81093706-81093725 MsG0780040681.01.T01:intron 20.0%
!!! AGCAACAAAATTAGTTTTAA+TGG + Chr7:81090918-81090937 None:intergenic 20.0%
!!! ATAACGTTTTTAATTCAAGT+GGG + Chr7:81096420-81096439 None:intergenic 20.0%
!!! GAAGTGTTGTTAATTTTTTT+AGG - Chr7:81095956-81095975 MsG0780040681.01.T01:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + Chr7:81091978-81091997 None:intergenic 20.0%
!!! GGTATATTTTTTAACTCAAT+AGG - Chr7:81091516-81091535 MsG0780040681.01.T01:CDS 20.0%
!!! GTACTAGTTTAATTTAAATG+AGG + Chr7:81092362-81092381 None:intergenic 20.0%
!!! TATAACGTTTTTAATTCAAG+TGG + Chr7:81096421-81096440 None:intergenic 20.0%
!!! TCTACGTGTTATTTTATAAT+TGG - Chr7:81090276-81090295 MsG0780040681.01.T01:three_prime_UTR 20.0%
!!! TGTTCCATATAATCTTATTT+TGG - Chr7:81096863-81096882 MsG0780040681.01.T01:intron 20.0%
!!! TTGTTTAACAAAGCTTTTAT+TGG - Chr7:81095494-81095513 MsG0780040681.01.T01:intron 20.0%
!!! TTTATATATGTTGATTGTCA+AGG - Chr7:81091328-81091347 MsG0780040681.01.T01:intron 20.0%
!!! TTTGTTTGTTTCTGAAATAT+GGG - Chr7:81089873-81089892 MsG0780040681.01.T01:three_prime_UTR 20.0%
! AAACATCAAAAGAAAAGGAA+TGG + Chr7:81090485-81090504 None:intergenic 25.0%
! AAACGACTCATAATTTAACA+CGG + Chr7:81094004-81094023 None:intergenic 25.0%
! AAAGTGATATTTGATGGAAA+TGG - Chr7:81091670-81091689 MsG0780040681.01.T01:CDS 25.0%
! AAATTAATACGTGACTCTAA+AGG - Chr7:81093276-81093295 MsG0780040681.01.T01:intron 25.0%
! AACAAGTTTAGAAAGAAAAC+TGG + Chr7:81092285-81092304 None:intergenic 25.0%
! AACATCACAAGAAAAAACAT+AGG - Chr7:81092461-81092480 MsG0780040681.01.T01:intron 25.0%
! ACATCCCTCAAAAAAAAAAA+GGG - Chr7:81092891-81092910 MsG0780040681.01.T01:intron 25.0%
! AGTATAACATCAAATAAGCA+AGG + Chr7:81091217-81091236 None:intergenic 25.0%
! ATATATTATATGCATGGCTT+AGG - Chr7:81093200-81093219 MsG0780040681.01.T01:intron 25.0%
! ATCAAAAAAAAAGGAATGGA+GGG - Chr7:81090725-81090744 MsG0780040681.01.T01:CDS 25.0%
! ATTTACATGTGATAAACCAA+AGG + Chr7:81090616-81090635 None:intergenic 25.0%
! CATTTCTTTGCAGATTATAA+TGG - Chr7:81095607-81095626 MsG0780040681.01.T01:intron 25.0%
! CCTATACCACTAATTAATAA+AGG - Chr7:81094150-81094169 MsG0780040681.01.T01:intron 25.0%
! CCTTTATTAATTAGTGGTAT+AGG + Chr7:81094153-81094172 None:intergenic 25.0%
! GACGAAACATAAATTAAAGA+TGG + Chr7:81097335-81097354 None:intergenic 25.0%
! GTATAACATCAAATAAGCAA+GGG + Chr7:81091216-81091235 None:intergenic 25.0%
! TAACTCATTCAATACTTGAA+TGG + Chr7:81093240-81093259 None:intergenic 25.0%
! TAATTGGTTAACAGTAAGAA+CGG - Chr7:81090292-81090311 MsG0780040681.01.T01:three_prime_UTR 25.0%
! TACAAAAATAATCTAACACG+TGG + Chr7:81093558-81093577 None:intergenic 25.0%
! TTCTTATAAATAGGACCAAA+GGG + Chr7:81093724-81093743 None:intergenic 25.0%
! TTTCTTATAAATAGGACCAA+AGG + Chr7:81093725-81093744 None:intergenic 25.0%
!! AACTTCTCTAAAAAATGGAA+TGG + Chr7:81095525-81095544 None:intergenic 25.0%
!! AGTTTTCTTATAAATAGGAC+CGG - Chr7:81093839-81093858 MsG0780040681.01.T01:intron 25.0%
!! CACTAAAACATCAAAAGTTT+TGG + Chr7:81090526-81090545 None:intergenic 25.0%
!! TAATAATAAAGCCCTCATTT+TGG + Chr7:81095839-81095858 None:intergenic 25.0%
!! TCCAAAACTTCTCTAAAAAA+TGG + Chr7:81095530-81095549 None:intergenic 25.0%
!! TCGAATTTAAAATCATCAAC+AGG + Chr7:81094353-81094372 None:intergenic 25.0%
!! TGAATACTTGTGATTTTGTA+GGG + Chr7:81092799-81092818 None:intergenic 25.0%
!! TGATGATTTTAAATTCGAAG+TGG - Chr7:81094355-81094374 MsG0780040681.01.T01:intron 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG + Chr7:81092001-81092020 None:intergenic 25.0%
!! TTGAATACTTGTGATTTTGT+AGG + Chr7:81092800-81092819 None:intergenic 25.0%
!! TTTTCAACACTCTTTTAGAT+TGG + Chr7:81090439-81090458 None:intergenic 25.0%
!!! AAACGACACTTATTTTGAAA+CGG - Chr7:81097204-81097223 MsG0780040681.01.T01:intron 25.0%
!!! AAATTCGTTTTTACAAAAGG+TGG - Chr7:81095873-81095892 MsG0780040681.01.T01:intron 25.0%
!!! AACCGCTTATTTTTTTTTTG+AGG - Chr7:81096141-81096160 MsG0780040681.01.T01:intron 25.0%
!!! AATTCCCCTTTTTTTTTTTG+AGG + Chr7:81092899-81092918 None:intergenic 25.0%
!!! ACCGCTTATTTTTTTTTTGA+GGG - Chr7:81096142-81096161 MsG0780040681.01.T01:intron 25.0%
!!! ACTTTAAAACTAGTATACCT+GGG + Chr7:81095703-81095722 None:intergenic 25.0%
!!! ATCTAAAAGAGTGTTGAAAA+TGG - Chr7:81090439-81090458 MsG0780040681.01.T01:CDS 25.0%
!!! ATTCCCCTTTTTTTTTTTGA+GGG + Chr7:81092898-81092917 None:intergenic 25.0%
!!! CGATGTAGATATTTTTAGAT+TGG - Chr7:81095724-81095743 MsG0780040681.01.T01:intron 25.0%
!!! CTCTAAAACATCAAAAGAAA+AGG + Chr7:81090490-81090509 None:intergenic 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + Chr7:81091979-81091998 None:intergenic 25.0%
!!! GTTTGTTTGTTTCTGAAATA+TGG - Chr7:81089872-81089891 MsG0780040681.01.T01:three_prime_UTR 25.0%
!!! TACTTTAAAACTAGTATACC+TGG + Chr7:81095704-81095723 None:intergenic 25.0%
!!! TATTTTTTAACTCAATAGGG+AGG - Chr7:81091520-81091539 MsG0780040681.01.T01:CDS 25.0%
!!! TCCATTTTTTAGAGAAGTTT+TGG - Chr7:81095526-81095545 MsG0780040681.01.T01:intron 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG + Chr7:81092000-81092019 None:intergenic 25.0%
!!! TTTTTTGATGTTTTAGCACT+TGG + Chr7:81090714-81090733 None:intergenic 25.0%
!!! TTTTTTGTCAAGTAGATTAG+AGG - Chr7:81094457-81094476 MsG0780040681.01.T01:intron 25.0%
AAAAGAAAAGGAAGCAACAT+AGG - Chr7:81093335-81093354 MsG0780040681.01.T01:intron 30.0%
AAATTCACACACTTAAAGTG+TGG - Chr7:81094482-81094501 MsG0780040681.01.T01:intron 30.0%
AAATTCCCAAACATTAGCAA+GGG - Chr7:81095632-81095651 MsG0780040681.01.T01:intron 30.0%
AACGACTCATAATTTAACAC+GGG + Chr7:81094003-81094022 None:intergenic 30.0%
AAGGAAGAATAACAAAGTTG+CGG - Chr7:81093295-81093314 MsG0780040681.01.T01:intron 30.0%
AAGTGTGCAAAACTCATTTA+AGG + Chr7:81093469-81093488 None:intergenic 30.0%
AATGTAGTACAAGTATGATG+AGG - Chr7:81096524-81096543 MsG0780040681.01.T01:intron 30.0%
AATTAATATTCCACTTGCAG+TGG - Chr7:81096476-81096495 MsG0780040681.01.T01:intron 30.0%
AATTATTGCATGTGATTCCT+CGG - Chr7:81091725-81091744 MsG0780040681.01.T01:CDS 30.0%
ACAACTGATAATAACTAACC+TGG + Chr7:81095243-81095262 None:intergenic 30.0%
ACGGAACCAACTTTAATATT+AGG - Chr7:81091389-81091408 MsG0780040681.01.T01:intron 30.0%
ACTAACAAAGTCTACATTCA+GGG - Chr7:81093086-81093105 MsG0780040681.01.T01:intron 30.0%
ACTTATTCAATCTGAAAGAC+TGG + Chr7:81096805-81096824 None:intergenic 30.0%
AGCAAAACATAGAACTGAAA+AGG - Chr7:81096684-81096703 MsG0780040681.01.T01:intron 30.0%
AGCTATTCTGATGCAATATT+TGG + Chr7:81090198-81090217 None:intergenic 30.0%
AGTCTTTCAGATTGAATAAG+TGG - Chr7:81096804-81096823 MsG0780040681.01.T01:intron 30.0%
AGTTGCTATACTCAGTAATA+AGG + Chr7:81091817-81091836 None:intergenic 30.0%
ATCAAAAGAAAAGGAATGGA+GGG + Chr7:81090481-81090500 None:intergenic 30.0%
ATCAAGAGAGTAGAATACTA+GGG - Chr7:81091433-81091452 MsG0780040681.01.T01:CDS 30.0%
ATCACATGCAATAATTGTAG+TGG + Chr7:81091721-81091740 None:intergenic 30.0%
ATCCTTGTAAATAACGTTCT+TGG - Chr7:81094534-81094553 MsG0780040681.01.T01:intron 30.0%
ATTATAGTAGTTGTGACCTT+TGG - Chr7:81090597-81090616 MsG0780040681.01.T01:CDS 30.0%
ATTTGAAAATGAGCAAAGCA+AGG - Chr7:81094894-81094913 MsG0780040681.01.T01:intron 30.0%
CACATCCCTCAAAAAAAAAA+AGG - Chr7:81092890-81092909 MsG0780040681.01.T01:intron 30.0%
CATACCCCTAATATTAAAGT+TGG + Chr7:81091398-81091417 None:intergenic 30.0%
CATCAAAAAAAAAGGAATGG+AGG - Chr7:81090724-81090743 MsG0780040681.01.T01:CDS 30.0%
CATCCCTCAAAAAAAAAAAG+GGG - Chr7:81092892-81092911 MsG0780040681.01.T01:intron 30.0%
CCCCTCAAAAAAAAAATAAG+CGG + Chr7:81096146-81096165 None:intergenic 30.0%
CCTTTGTTGAAAATGGTATT+CGG + Chr7:81094992-81095011 None:intergenic 30.0%
CGGAACCAACTTTAATATTA+GGG - Chr7:81091390-81091409 MsG0780040681.01.T01:intron 30.0%
CTTATACTTAAAAGTAGGGT+CGG + Chr7:81096207-81096226 None:intergenic 30.0%
GAAAAGGATATGATTGTGTT+AGG + Chr7:81091354-81091373 None:intergenic 30.0%
GGAACCAACTTTAATATTAG+GGG - Chr7:81091391-81091410 MsG0780040681.01.T01:intron 30.0%
GTATTGAATGAGTTAGAACT+TGG - Chr7:81093245-81093264 MsG0780040681.01.T01:intron 30.0%
GTTAAAAATCCACCTTCATA+AGG - Chr7:81090237-81090256 MsG0780040681.01.T01:three_prime_UTR 30.0%
TAAATTCCCAAACATTAGCA+AGG - Chr7:81095631-81095650 MsG0780040681.01.T01:intron 30.0%
TAGAAAGAAAACTGGATTGA+AGG + Chr7:81092277-81092296 None:intergenic 30.0%
TATCAAGAGAGTAGAATACT+AGG - Chr7:81091432-81091451 MsG0780040681.01.T01:CDS 30.0%
TATGTATAGCCTGAATGAAA+AGG + Chr7:81091370-81091389 None:intergenic 30.0%
TATTGCATTGGAAACTGAAA+GGG + Chr7:81097023-81097042 None:intergenic 30.0%
TCTTAGCATATCATAGAGAT+TGG - Chr7:81091298-81091317 MsG0780040681.01.T01:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG + Chr7:81092104-81092123 None:intergenic 30.0%
TGTTAGAAGTTGAAAGTAGA+AGG + Chr7:81094873-81094892 None:intergenic 30.0%
TTATCAGTTGGATGAAAAGA+GGG + Chr7:81093424-81093443 None:intergenic 30.0%
TTATTGCATTGGAAACTGAA+AGG + Chr7:81097024-81097043 None:intergenic 30.0%
TTCCACTTTATCTTGCAAAA+CGG - Chr7:81090082-81090101 MsG0780040681.01.T01:three_prime_UTR 30.0%
TTGCAATTTATCTGCATTCA+GGG - Chr7:81093115-81093134 MsG0780040681.01.T01:intron 30.0%
TTGCAATTTCTCTTCATTCA+GGG + Chr7:81092965-81092984 None:intergenic 30.0%
TTTCATTCAGGCTATACATA+CGG - Chr7:81091370-81091389 MsG0780040681.01.T01:intron 30.0%
TTTGCAATTTATCTGCATTC+AGG - Chr7:81093114-81093133 MsG0780040681.01.T01:intron 30.0%
TTTGCAATTTCTCTTCATTC+AGG + Chr7:81092966-81092985 None:intergenic 30.0%
! AAACTTGTTTGGATGTAAGA+AGG + Chr7:81094843-81094862 None:intergenic 30.0%
! AAGGATAACGAAAACTTGTT+TGG + Chr7:81094854-81094873 None:intergenic 30.0%
! CAATCATATCCTTTTCATTC+AGG - Chr7:81091358-81091377 MsG0780040681.01.T01:intron 30.0%
! GTGGATTTTTAACACTCAAT+CGG + Chr7:81090230-81090249 None:intergenic 30.0%
! GTTTTCTTATAAATAGGACC+GGG - Chr7:81093840-81093859 MsG0780040681.01.T01:intron 30.0%
! TATTAGGTTGCCTTATGTTT+GGG - Chr7:81096181-81096200 MsG0780040681.01.T01:intron 30.0%
! TATTTTTCACCGTATCCATT+TGG - Chr7:81091137-81091156 MsG0780040681.01.T01:intron 30.0%
! TCAGTAGAGTACTAATTGAT+AGG + Chr7:81091568-81091587 None:intergenic 30.0%
! TGATGCATACATGACATTTT+TGG - Chr7:81096762-81096781 MsG0780040681.01.T01:intron 30.0%
! TGGATTTTTAACACTCAATC+GGG + Chr7:81090229-81090248 None:intergenic 30.0%
! TTATTAGGTTGCCTTATGTT+TGG - Chr7:81096180-81096199 MsG0780040681.01.T01:intron 30.0%
! TTTATGGTGTTTTCCAACAA+GGG + Chr7:81090575-81090594 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + Chr7:81096966-81096985 None:intergenic 30.0%
!! AACACATTTTCACTCTAGAA+AGG - Chr7:81093887-81093906 MsG0780040681.01.T01:intron 30.0%
!! ATGATGTTTCTTGATGATGA+AGG - Chr7:81089949-81089968 MsG0780040681.01.T01:three_prime_UTR 30.0%
!! TTTCTGAAATATGGCATACT+TGG - Chr7:81089881-81089900 MsG0780040681.01.T01:three_prime_UTR 30.0%
!!! AAGTTTTGGAATCATACGAT+GGG - Chr7:81095540-81095559 MsG0780040681.01.T01:intron 30.0%
!!! CCGCTTATTTTTTTTTTGAG+GGG - Chr7:81096143-81096162 MsG0780040681.01.T01:intron 30.0%
AACAGTAAGAACGGTTCATA+AGG - Chr7:81090301-81090320 MsG0780040681.01.T01:intron 35.0%
AAGAAAACTGGATTGAAGGT+AGG + Chr7:81092273-81092292 None:intergenic 35.0%
AAGCAATAATGCAAGTGAAG+TGG + Chr7:81091620-81091639 None:intergenic 35.0%
AAGTACTTGGCATTTAAGCA+GGG - Chr7:81095779-81095798 MsG0780040681.01.T01:intron 35.0%
AATCCACCTTCATAAGGAAT+TGG - Chr7:81090243-81090262 MsG0780040681.01.T01:three_prime_UTR 35.0%
ACGACTCATAATTTAACACG+GGG + Chr7:81094002-81094021 None:intergenic 35.0%
ACTAACAGAGTCTACATTCA+GGG - Chr7:81093022-81093041 MsG0780040681.01.T01:intron 35.0%
ACTAACGAAGTTTGCATTCA+AGG - Chr7:81093054-81093073 MsG0780040681.01.T01:intron 35.0%
ACTGATAATAACTAACCTGG+TGG + Chr7:81095240-81095259 None:intergenic 35.0%
ACTTCACTTGCATTATTGCT+TGG - Chr7:81091619-81091638 MsG0780040681.01.T01:CDS 35.0%
AGAAAATGGGTCAGTTATTC+CGG + Chr7:81091965-81091984 None:intergenic 35.0%
AGAGCTAGAACTTATAGTCT+TGG - Chr7:81090128-81090147 MsG0780040681.01.T01:three_prime_UTR 35.0%
AGCAATAATGCAAGTGAAGT+GGG + Chr7:81091619-81091638 None:intergenic 35.0%
AGCTACTAGACTTGCAATTT+AGG - Chr7:81092487-81092506 MsG0780040681.01.T01:intron 35.0%
AGTAATATTTGCTTGAGTGG+TGG - Chr7:81097231-81097250 MsG0780040681.01.T01:intron 35.0%
ATAGGGAGGACAATAATGTT+AGG - Chr7:81091534-81091553 MsG0780040681.01.T01:CDS 35.0%
ATATCTCCTCACTTATGTCA+TGG - Chr7:81093913-81093932 MsG0780040681.01.T01:intron 35.0%
ATTGAATAAGTGGAGCATGT+TGG - Chr7:81096814-81096833 MsG0780040681.01.T01:intron 35.0%
ATTGAGGACATGATATGTCA+AGG + Chr7:81092841-81092860 None:intergenic 35.0%
CAAAGCAAACACCAAAATGA+GGG - Chr7:81095825-81095844 MsG0780040681.01.T01:intron 35.0%
CACCAAGAACGTTATTTACA+AGG + Chr7:81094539-81094558 None:intergenic 35.0%
CATATCGATATCTAGCAGAA+TGG + Chr7:81096105-81096124 None:intergenic 35.0%
CATCAAAAGAAAAGGAATGG+AGG + Chr7:81090482-81090501 None:intergenic 35.0%
CTTGAATGGTGAAACATGAA+TGG + Chr7:81093226-81093245 None:intergenic 35.0%
GACAACTGGACTACATTTAT+TGG - Chr7:81094558-81094577 MsG0780040681.01.T01:intron 35.0%
GACTAACAAAGTCTACATTC+AGG - Chr7:81093085-81093104 MsG0780040681.01.T01:intron 35.0%
GAGAGTAATATTTGCTTGAG+TGG - Chr7:81097228-81097247 MsG0780040681.01.T01:intron 35.0%
GATGAACTTTGACCTTTATC+AGG + Chr7:81096398-81096417 None:intergenic 35.0%
GCAAGACTTGAGATCTAAAA+TGG - Chr7:81092542-81092561 MsG0780040681.01.T01:intron 35.0%
GTAATATTTGCTTGAGTGGT+GGG - Chr7:81097232-81097251 MsG0780040681.01.T01:intron 35.0%
GTTATCAGTTGGATGAAAAG+AGG + Chr7:81093425-81093444 None:intergenic 35.0%
GTTGCTTCCTTTGTTGAAAA+TGG + Chr7:81094999-81095018 None:intergenic 35.0%
TAAGTACTTGGCATTTAAGC+AGG - Chr7:81095778-81095797 MsG0780040681.01.T01:intron 35.0%
TAATATTTGCTTGAGTGGTG+GGG - Chr7:81097233-81097252 MsG0780040681.01.T01:intron 35.0%
TATATAGGCATAACCCATGT+TGG - Chr7:81096333-81096352 MsG0780040681.01.T01:intron 35.0%
TATCAGTTGGATGAAAAGAG+GGG + Chr7:81093423-81093442 None:intergenic 35.0%
TCAAGAGAGTAGAATACTAG+GGG - Chr7:81091434-81091453 MsG0780040681.01.T01:CDS 35.0%
TCTACATGCATGTCTCAAAT+GGG - Chr7:81097298-81097317 MsG0780040681.01.T01:five_prime_UTR 35.0%
TCTACATTGCCAAATGGATA+CGG + Chr7:81091149-81091168 None:intergenic 35.0%
TGATTCCCTTGCTAATGTTT+GGG + Chr7:81095640-81095659 None:intergenic 35.0%
TGTGTAATTGTGTCAATGCT+AGG + Chr7:81091273-81091292 None:intergenic 35.0%
TGTTAGCCAATTCCTTATGA+AGG + Chr7:81090252-81090271 None:intergenic 35.0%
TTCATCCAACTGATAACACA+AGG - Chr7:81093428-81093447 MsG0780040681.01.T01:intron 35.0%
TTCTACATGCATGTCTCAAA+TGG - Chr7:81097297-81097316 MsG0780040681.01.T01:five_prime_UTR 35.0%
TTGATTCCCTTGCTAATGTT+TGG + Chr7:81095641-81095660 None:intergenic 35.0%
TTTACGTAAAAGTCATGTGC+TGG + Chr7:81095455-81095474 None:intergenic 35.0%
TTTAGATCTCAAGTCTTGCT+AGG + Chr7:81092541-81092560 None:intergenic 35.0%
TTTCTCAAGTTTACCCTTGT+TGG - Chr7:81090559-81090578 MsG0780040681.01.T01:CDS 35.0%
! AAAAGGTGGTAGTGTTGTTA+TGG - Chr7:81095887-81095906 MsG0780040681.01.T01:intron 35.0%
! AGAACTTATAGTCTTGGAGT+TGG - Chr7:81090134-81090153 MsG0780040681.01.T01:three_prime_UTR 35.0%
! CCGAATACCATTTTCAACAA+AGG - Chr7:81094989-81095008 MsG0780040681.01.T01:intron 35.0%
! CGGAACATCTAGTTCAATTA+CGG + Chr7:81094972-81094991 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + Chr7:81097073-81097092 None:intergenic 35.0%
! GTCTAAAGCAAGGGTTTATT+AGG - Chr7:81096165-81096184 MsG0780040681.01.T01:intron 35.0%
! GTTTATGGTGTTTTCCAACA+AGG + Chr7:81090576-81090595 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + Chr7:81097069-81097088 None:intergenic 35.0%
!! GTTTCTTGATGATGAAGGAA+CGG - Chr7:81089954-81089973 MsG0780040681.01.T01:three_prime_UTR 35.0%
!! TGAGTTTTGCACACTTGTTA+TGG - Chr7:81093473-81093492 MsG0780040681.01.T01:intron 35.0%
!!! CTCATTTTGGTGTTTGCTTT+GGG + Chr7:81095826-81095845 None:intergenic 35.0%
!!! GAAGTTTTGGAATCATACGA+TGG - Chr7:81095539-81095558 MsG0780040681.01.T01:intron 35.0%
!!! TTTTGGAGTATCACAAGTAG+CGG - Chr7:81096779-81096798 MsG0780040681.01.T01:intron 35.0%
AAACTAGTATACCTGGGAGT+TGG + Chr7:81095697-81095716 None:intergenic 40.0%
AAAGGAAGCAACATAGGAAG+AGG - Chr7:81093341-81093360 MsG0780040681.01.T01:intron 40.0%
AACGGCTTACGATATCTTTG+AGG - Chr7:81095108-81095127 MsG0780040681.01.T01:intron 40.0%
AACTAGTATACCTGGGAGTT+GGG + Chr7:81095696-81095715 None:intergenic 40.0%
AAGAAGGGACACTCATTAGA+TGG + Chr7:81094940-81094959 None:intergenic 40.0%
AAGGAAGCAACATAGGAAGA+GGG - Chr7:81093342-81093361 MsG0780040681.01.T01:intron 40.0%
AAGTTGTGGTTGACGAATTG+TGG + Chr7:81090064-81090083 None:intergenic 40.0%
AATAATGCAAGTGAAGTGGG+AGG + Chr7:81091616-81091635 None:intergenic 40.0%
AATAATGTGATGTGCAGCAG+TGG - Chr7:81094727-81094746 MsG0780040681.01.T01:intron 40.0%
AGAAGGGACACTCATTAGAT+GGG + Chr7:81094939-81094958 None:intergenic 40.0%
AGAGTCTCTACATTGCCAAA+TGG + Chr7:81091155-81091174 None:intergenic 40.0%
AGTATAGCAACTGTAGCTTC+TGG - Chr7:81091825-81091844 MsG0780040681.01.T01:intron 40.0%
AGTTGTGGTTGACGAATTGT+GGG + Chr7:81090063-81090082 None:intergenic 40.0%
AGTTTCCACATCTTCGTGAA+CGG + Chr7:81091111-81091130 None:intergenic 40.0%
ATGCACTTGCAACAATTTCG+GGG + Chr7:81095673-81095692 None:intergenic 40.0%
ATTACGGCAACTAGAGAAGA+AGG + Chr7:81094956-81094975 None:intergenic 40.0%
ATTATAAGTTTGCCATGCGC+CGG + Chr7:81096568-81096587 None:intergenic 40.0%
CAAAGCAGGTCAATTATACC+GGG - Chr7:81092148-81092167 MsG0780040681.01.T01:CDS 40.0%
CAAGATCCATGACATAAGTG+AGG + Chr7:81093922-81093941 None:intergenic 40.0%
CAGCAGTGGTTGAAAACATT+CGG - Chr7:81094741-81094760 MsG0780040681.01.T01:intron 40.0%
CCAAAGCAAACACCAAAATG+AGG - Chr7:81095824-81095843 MsG0780040681.01.T01:intron 40.0%
CCAAAGCAGGTCAATTATAC+CGG - Chr7:81092147-81092166 MsG0780040681.01.T01:CDS 40.0%
CGACTCATAATTTAACACGG+GGG + Chr7:81094001-81094020 None:intergenic 40.0%
CTACGTGACTGTTAAGTACT+TGG - Chr7:81095766-81095785 MsG0780040681.01.T01:intron 40.0%
CTTAAACTCATACTCCATCC+CGG + Chr7:81093861-81093880 None:intergenic 40.0%
GAAAAGGAGTTCAAACAGCT+GGG - Chr7:81096700-81096719 MsG0780040681.01.T01:intron 40.0%
GAAAATGGGTCAGTTATTCC+GGG + Chr7:81091964-81091983 None:intergenic 40.0%
GACTAACAGAGTCTACATTC+AGG - Chr7:81093021-81093040 MsG0780040681.01.T01:intron 40.0%
GATCATGTAAGTGCAGTGTT+GGG + Chr7:81093974-81093993 None:intergenic 40.0%
GATGCACTTGCAACAATTTC+GGG + Chr7:81095674-81095693 None:intergenic 40.0%
GCAAGATAAAGTGGAAGTTG+TGG + Chr7:81090078-81090097 None:intergenic 40.0%
GCGAACAATTGCCAAAATCT+CGG + Chr7:81095038-81095057 None:intergenic 40.0%
GGATGCACTTGCAACAATTT+CGG + Chr7:81095675-81095694 None:intergenic 40.0%
GTAAAGGTGGATGACTAATC+CGG + Chr7:81091082-81091101 None:intergenic 40.0%
GTCTTCATGATGACCATGTA+CGG - Chr7:81096655-81096674 MsG0780040681.01.T01:intron 40.0%
TAGAAAGTTCTCACTTGCAG+AGG - Chr7:81095153-81095172 MsG0780040681.01.T01:intron 40.0%
TAGCCAATTCCTTATGAAGG+TGG + Chr7:81090249-81090268 None:intergenic 40.0%
TCTCTTGCTGAAGATGAAGA+CGG - Chr7:81095184-81095203 MsG0780040681.01.T01:intron 40.0%
TCTGTGTGAAAAACCAAAGC+AGG - Chr7:81092134-81092153 MsG0780040681.01.T01:CDS 40.0%
TCTTATAAATAGGACCGGGA+TGG - Chr7:81093844-81093863 MsG0780040681.01.T01:intron 40.0%
TCTTCATGATGACCATGTAC+GGG - Chr7:81096656-81096675 MsG0780040681.01.T01:intron 40.0%
TCTTCATTCAGGGACTAAAG+TGG + Chr7:81092955-81092974 None:intergenic 40.0%
TGAAAAGGAGTTCAAACAGC+TGG - Chr7:81096699-81096718 MsG0780040681.01.T01:intron 40.0%
TGATCATGTAAGTGCAGTGT+TGG + Chr7:81093975-81093994 None:intergenic 40.0%
TGATGAAGGAACGGTAAAAG+TGG - Chr7:81089963-81089982 MsG0780040681.01.T01:three_prime_UTR 40.0%
TGCATAGCATGCGTATATGA+GGG - Chr7:81095361-81095380 MsG0780040681.01.T01:intron 40.0%
TTACGGCAACTAGAGAAGAA+GGG + Chr7:81094955-81094974 None:intergenic 40.0%
TTGCACCTTGTGTTATCAGT+TGG + Chr7:81093436-81093455 None:intergenic 40.0%
TTGCATAGCATGCGTATATG+AGG - Chr7:81095360-81095379 MsG0780040681.01.T01:intron 40.0%
! ACGTATGCTCAGGTTGTTAA+CGG - Chr7:81095090-81095109 MsG0780040681.01.T01:intron 40.0%
! AGCACTTGGCACAAGTTTTA+AGG + Chr7:81090700-81090719 None:intergenic 40.0%
! AGTCACTTTAGTCCCTGAAT+CGG + Chr7:81092938-81092919 None:intergenic 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG - Chr7:81092919-81092938 MsG0780040681.01.T01:intron 40.0%
! ATAACGTTCTTGGTGACAAC+TGG - Chr7:81094544-81094563 MsG0780040681.01.T01:intron 40.0%
! GACCGTTTTGCAAGATAAAG+TGG + Chr7:81090087-81090106 None:intergenic 40.0%
! GTGGAAACTTTAGTGGATGT+CGG - Chr7:81095572-81095591 MsG0780040681.01.T01:intron 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + Chr7:81097070-81097089 None:intergenic 40.0%
! GTGTTTTGTCTCTTTCTGTG+TGG - Chr7:81089826-81089845 MsG0780040681.01.T01:three_prime_UTR 40.0%
! TAATCAAGTTGTTTGGGCTC+CGG - Chr7:81090959-81090978 MsG0780040681.01.T01:intron 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG - Chr7:81092918-81092937 MsG0780040681.01.T01:intron 40.0%
!! TTTTGAGGGGTCTAAAGCAA+GGG - Chr7:81096156-81096175 MsG0780040681.01.T01:intron 40.0%
!! TTTTGCTTTTGACCCGTACA+TGG + Chr7:81096671-81096690 None:intergenic 40.0%
!! TTTTTGAGGGGTCTAAAGCA+AGG - Chr7:81096155-81096174 MsG0780040681.01.T01:intron 40.0%
!!! AAGAAAGGCTGGTTTTTTCC+AGG - Chr7:81089761-81089780 MsG0780040681.01.T01:three_prime_UTR 40.0%
!!! CCTCATTTTGGTGTTTGCTT+TGG + Chr7:81095827-81095846 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+TGG + Chr7:81096962-81096981 None:intergenic 40.0%
AAAATCTCGGAAGCCGACAT+AGG + Chr7:81095025-81095044 None:intergenic 45.0%
AAAGTTCTCACTTGCAGAGG+TGG - Chr7:81095156-81095175 MsG0780040681.01.T01:intron 45.0%
AACCATTCCGAAAGGTGAAC+GGG - Chr7:81095426-81095445 MsG0780040681.01.T01:intron 45.0%
AACGAACATGCGTAAGTCCT+AGG + Chr7:81096054-81096073 None:intergenic 45.0%
AAGTTCTCACTTGCAGAGGT+GGG - Chr7:81095157-81095176 MsG0780040681.01.T01:intron 45.0%
ACATCTTCGTGAACGGGTAT+GGG + Chr7:81091104-81091123 None:intergenic 45.0%
ACATTATACTACCTCCGTCC+CGG + Chr7:81092169-81092188 None:intergenic 45.0%
ACTTGGCATTTAAGCAGGGT+CGG - Chr7:81095783-81095802 MsG0780040681.01.T01:intron 45.0%
ACTTTAGTCCCTGAATCGGA+AGG + Chr7:81093157-81093176 None:intergenic 45.0%
AGGAAGCAACCTTCCTATGT+CGG - Chr7:81095009-81095028 MsG0780040681.01.T01:intron 45.0%
AGGGTCTCTACATTGCCAAA+TGG + Chr7:81091197-81091216 None:intergenic 45.0%
ATAACCTGGAACGTATGCTC+AGG - Chr7:81095080-81095099 MsG0780040681.01.T01:intron 45.0%
ATAGGCATAACCCATGTTGG+TGG - Chr7:81096336-81096355 MsG0780040681.01.T01:intron 45.0%
ATCCACAGAACCATTCCGAA+AGG - Chr7:81095418-81095437 MsG0780040681.01.T01:intron 45.0%
ATGTCATGGATCTTGTGACG+AGG - Chr7:81093927-81093946 MsG0780040681.01.T01:intron 45.0%
ATTGCAAAACAGTCCCTGCA+TGG - Chr7:81092978-81092997 MsG0780040681.01.T01:intron 45.0%
CACTTGCAGTGGTTGTGTTT+GGG - Chr7:81096487-81096506 MsG0780040681.01.T01:intron 45.0%
CCGGTATAATTGACCTGCTT+TGG + Chr7:81092150-81092169 None:intergenic 45.0%
CTTCACAGTGTCTTCAACCT+AGG - Chr7:81096034-81096053 MsG0780040681.01.T01:intron 45.0%
CTTTAGTCCCTGAATCGGAA+GGG + Chr7:81093156-81093175 None:intergenic 45.0%
GAACCATTCCGAAAGGTGAA+CGG - Chr7:81095425-81095444 MsG0780040681.01.T01:intron 45.0%
GATTGTTGTAGCGAGTACGT+TGG - Chr7:81096836-81096855 MsG0780040681.01.T01:intron 45.0%
GGACTTAGCATTCATCTTCC+TGG + Chr7:81089782-81089801 None:intergenic 45.0%
GGTCGGCACAATAAATTGTG+AGG - Chr7:81095800-81095819 MsG0780040681.01.T01:intron 45.0%
GTTTCCACATCTTCGTGAAC+GGG + Chr7:81091110-81091129 None:intergenic 45.0%
TCCCTGAAATTGACCATGCA+GGG + Chr7:81092994-81093013 None:intergenic 45.0%
TCCCTGCATGGTCAATTTCA+GGG - Chr7:81092990-81093009 MsG0780040681.01.T01:intron 45.0%
TCGTGGTGTGGAAACTTTAG+TGG - Chr7:81095565-81095584 MsG0780040681.01.T01:intron 45.0%
TCTCTTTCTGTGTGGTACAG+TGG - Chr7:81089834-81089853 MsG0780040681.01.T01:three_prime_UTR 45.0%
TGGAGACGCTATCCTGATAA+AGG - Chr7:81096383-81096402 MsG0780040681.01.T01:intron 45.0%
TGTGTAGTTGCTATCAACCG+AGG + Chr7:81091745-81091764 None:intergenic 45.0%
TTACATGCTTCAACACCACC+AGG - Chr7:81095222-81095241 MsG0780040681.01.T01:intron 45.0%
TTGGCAATTGTTCGCCCAAA+CGG - Chr7:81095043-81095062 MsG0780040681.01.T01:intron 45.0%
TTTATCAGGATAGCGTCTCC+AGG + Chr7:81096384-81096403 None:intergenic 45.0%
! AGAAGCTACAGCTGGTTTAG+GGG + Chr7:81089803-81089822 None:intergenic 45.0%
! CAGAAGCTACAGCTGGTTTA+GGG + Chr7:81089804-81089823 None:intergenic 45.0%
! CTAGGTTGAAGACACTGTGA+AGG + Chr7:81096036-81096055 None:intergenic 45.0%
! GAAACTTTAGTGGATGTCGG+AGG - Chr7:81095575-81095594 MsG0780040681.01.T01:intron 45.0%
! GAATCATACGATGGGTTTCG+TGG - Chr7:81095548-81095567 MsG0780040681.01.T01:intron 45.0%
! GGTGGTGTTGAAGCATGTAA+GGG + Chr7:81095222-81095241 None:intergenic 45.0%
! GTGGTGTTGAAGCATGTAAG+GGG + Chr7:81095221-81095240 None:intergenic 45.0%
! TGGTGGTGTTGAAGCATGTA+AGG + Chr7:81095223-81095242 None:intergenic 45.0%
! TTCGGAATGGTTCTGTGGAT+GGG + Chr7:81095418-81095437 None:intergenic 45.0%
! TTTCGGAATGGTTCTGTGGA+TGG + Chr7:81095419-81095438 None:intergenic 45.0%
!! GAGGAGCACTTGATGAGTAA+TGG - Chr7:81095127-81095146 MsG0780040681.01.T01:intron 45.0%
!!! TATGTCGGCTTCCGAGATTT+TGG - Chr7:81095024-81095043 MsG0780040681.01.T01:intron 45.0%
!! ATAAAATTTAGTTATTTAAT+AGG - Chr7:81094581-81094600 MsG0780040681.01.T01:intron 5.0%
!! TAAAATTTAGTTATTTAATA+GGG - Chr7:81094582-81094601 MsG0780040681.01.T01:intron 5.0%
!!! ATAATATATGATTTTTTTTT+GGG + Chr7:81093189-81093208 None:intergenic 5.0%
!!! TATAATATATGATTTTTTTT+TGG + Chr7:81093190-81093209 None:intergenic 5.0%
AACACACCAGAAGCTACAGC+TGG + Chr7:81089811-81089830 None:intergenic 50.0%
AATGCAAGTGAAGTGGGAGG+TGG + Chr7:81091613-81091632 None:intergenic 50.0%
ACAACCTGAGCATACGTTCC+AGG + Chr7:81095087-81095106 None:intergenic 50.0%
ACATGTCTCTACGCATGAGC+CGG - Chr7:81091060-81091079 MsG0780040681.01.T01:intron 50.0%
ACCAGGTCAAAGGCTTTGCT+AGG - Chr7:81096625-81096644 MsG0780040681.01.T01:intron 50.0%
ACCATTCCGAAAGGTGAACG+GGG - Chr7:81095427-81095446 MsG0780040681.01.T01:intron 50.0%
ACCTAGCAAAGCCTTTGACC+TGG + Chr7:81096629-81096648 None:intergenic 50.0%
ACTGGACTACTTCACCCTCA+CGG - Chr7:81093391-81093410 MsG0780040681.01.T01:intron 50.0%
AGCATGCGTATATGAGGGCA+TGG - Chr7:81095366-81095385 MsG0780040681.01.T01:intron 50.0%
AGGAAGGGAAGCAGATAACC+TGG - Chr7:81095066-81095085 MsG0780040681.01.T01:intron 50.0%
AGGTCAAAGGCTTTGCTAGG+TGG - Chr7:81096628-81096647 MsG0780040681.01.T01:intron 50.0%
AGTGGATGTCGGAGGCAATA+CGG - Chr7:81095583-81095602 MsG0780040681.01.T01:intron 50.0%
AGTGGCATCACCACCAACAT+GGG + Chr7:81096349-81096368 None:intergenic 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + Chr7:81091960-81091979 None:intergenic 50.0%
ATTACCGGGTTCGATTCCCA+GGG - Chr7:81091016-81091035 MsG0780040681.01.T01:intron 50.0%
CACATCTTCGTGAACGGGTA+TGG + Chr7:81091105-81091124 None:intergenic 50.0%
CATACCCGTTCACGAAGATG+TGG - Chr7:81091103-81091122 MsG0780040681.01.T01:intron 50.0%
CCAAACACAACCACTGCAAG+TGG + Chr7:81096489-81096508 None:intergenic 50.0%
CCACTTGCAGTGGTTGTGTT+TGG - Chr7:81096486-81096505 MsG0780040681.01.T01:intron 50.0%
CCTAAACCAGCTGTAGCTTC+TGG - Chr7:81089802-81089821 MsG0780040681.01.T01:three_prime_UTR 50.0%
CTTTAGTCCCTGAATGGGAG+AGG - Chr7:81092924-81092943 MsG0780040681.01.T01:intron 50.0%
GAATTGCCATCGCACTCTTC+CGG - Chr7:81096546-81096565 MsG0780040681.01.T01:intron 50.0%
GACGAATCCCTTCCGATTCA+GGG - Chr7:81093146-81093165 MsG0780040681.01.T01:intron 50.0%
GAGGTGGAGGTGACGTTAAA+GGG + Chr7:81091591-81091610 None:intergenic 50.0%
GCAGGTCAATTATACCGGGA+CGG - Chr7:81092152-81092171 MsG0780040681.01.T01:CDS 50.0%
GGTCAAAGGCTTTGCTAGGT+GGG - Chr7:81096629-81096648 MsG0780040681.01.T01:intron 50.0%
GTCCCTGAAATTGACCATGC+AGG + Chr7:81092995-81093014 None:intergenic 50.0%
GTCCCTGCATGGTCAATTTC+AGG - Chr7:81092989-81093008 MsG0780040681.01.T01:intron 50.0%
GTTGACGAATTGTGGGAAGC+AGG + Chr7:81090056-81090075 None:intergenic 50.0%
TCAACCACGTCCTTAAGGAG+AGG + Chr7:81095392-81095411 None:intergenic 50.0%
TCATGGATCTTGTGACGAGG+AGG - Chr7:81093930-81093949 MsG0780040681.01.T01:intron 50.0%
TCCAGGAGGAACAAACTCAG+TGG + Chr7:81096367-81096386 None:intergenic 50.0%
TCGTGAACGGGTATGGGTAA+AGG + Chr7:81091098-81091117 None:intergenic 50.0%
TCTCCTTAAGGACGTGGTTG+AGG - Chr7:81095391-81095410 MsG0780040681.01.T01:intron 50.0%
TGAACGGGTATGGGTAAAGG+TGG + Chr7:81091095-81091114 None:intergenic 50.0%
TGACGAATCCCTTCCGATTC+AGG - Chr7:81093145-81093164 MsG0780040681.01.T01:intron 50.0%
! ATACGATGGGTTTCGTGGTG+TGG - Chr7:81095553-81095572 MsG0780040681.01.T01:intron 50.0%
! CACCTTTCGGAATGGTTCTG+TGG + Chr7:81095423-81095442 None:intergenic 50.0%
! CCAGAAGCTACAGCTGGTTT+AGG + Chr7:81089805-81089824 None:intergenic 50.0%
!! GGACAAAAGCACCAGGTCAA+AGG - Chr7:81096615-81096634 MsG0780040681.01.T01:intron 50.0%
!! TGAACAGCATTGACCACGAC+TGG - Chr7:81093373-81093392 MsG0780040681.01.T01:intron 50.0%
ACTACTTCACCCTCACGGAC+TGG - Chr7:81093396-81093415 MsG0780040681.01.T01:intron 55.0%
AGGACGTATCCGGGGATTAC+CGG - Chr7:81091001-81091020 MsG0780040681.01.T01:intron 55.0%
AGGGTGAAGTAGTCCAGTCG+TGG + Chr7:81093389-81093408 None:intergenic 55.0%
ATCAGGATAGCGTCTCCAGG+AGG + Chr7:81096381-81096400 None:intergenic 55.0%
ATGGCCTCTCCTTAAGGACG+TGG - Chr7:81095385-81095404 MsG0780040681.01.T01:intron 55.0%
CAGTGGCATCACCACCAACA+TGG + Chr7:81096350-81096369 None:intergenic 55.0%
CTACATTACTCCCTCCGTCC+CGG - Chr7:81091943-81091962 MsG0780040681.01.T01:CDS 55.0%
CTCCTAGCAAGGACGTATCC+GGG - Chr7:81090992-81091011 MsG0780040681.01.T01:intron 55.0%
CTGCTTCCCTTCCTCCGTTT+GGG + Chr7:81095060-81095079 None:intergenic 55.0%
CTGGTTCCCCGTTCACCTTT+CGG + Chr7:81095436-81095455 None:intergenic 55.0%
GAATCGAACCCGGTAATCCC+CGG + Chr7:81091013-81091032 None:intergenic 55.0%
GACCAAACGTTGTTCCCCCT+GGG + Chr7:81091035-81091054 None:intergenic 55.0%
GATTACCGGGTTCGATTCCC+AGG - Chr7:81091015-81091034 MsG0780040681.01.T01:intron 55.0%
GCAATTGTTCGCCCAAACGG+AGG - Chr7:81095046-81095065 MsG0780040681.01.T01:intron 55.0%
GCTCCTAGCAAGGACGTATC+CGG - Chr7:81090991-81091010 MsG0780040681.01.T01:intron 55.0%
GGAGGTGGAGGTGACGTTAA+AGG + Chr7:81091592-81091611 None:intergenic 55.0%
GGAGTTCAAACAGCTGGGTG+TGG - Chr7:81096705-81096724 MsG0780040681.01.T01:intron 55.0%
GGCGAATCCTCTCCCATTCA+GGG + Chr7:81092934-81092953 None:intergenic 55.0%
GGTCAATTATACCGGGACGG+AGG - Chr7:81092155-81092174 MsG0780040681.01.T01:CDS 55.0%
GGTCCTCAACCACGTCCTTA+AGG + Chr7:81095397-81095416 None:intergenic 55.0%
GTAGGGTCGGCCCAAACATA+AGG + Chr7:81096194-81096213 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG + Chr7:81091956-81091975 None:intergenic 55.0%
GTGGATGTCGGAGGCAATAC+GGG - Chr7:81095584-81095603 MsG0780040681.01.T01:intron 55.0%
TCCCCGTTCACCTTTCGGAA+TGG + Chr7:81095431-81095450 None:intergenic 55.0%
TCCTAGCAAGGACGTATCCG+GGG - Chr7:81090993-81091012 MsG0780040681.01.T01:intron 55.0%
TCTCGGAAGCCGACATAGGA+AGG + Chr7:81095021-81095040 None:intergenic 55.0%
TCTGCTTCCCTTCCTCCGTT+TGG + Chr7:81095061-81095080 None:intergenic 55.0%
TGACCAAACGTTGTTCCCCC+TGG + Chr7:81091036-81091055 None:intergenic 55.0%
TGGCGAATCCTCTCCCATTC+AGG + Chr7:81092935-81092954 None:intergenic 55.0%
TGTTCGCCCAAACGGAGGAA+GGG - Chr7:81095051-81095070 MsG0780040681.01.T01:intron 55.0%
TTACCGGGTTCGATTCCCAG+GGG - Chr7:81091017-81091036 MsG0780040681.01.T01:intron 55.0%
TTCCCAGGGGGAACAACGTT+TGG - Chr7:81091030-81091049 MsG0780040681.01.T01:intron 55.0%
TTGTGATCCTGTGCTGCCAG+AGG - Chr7:81096588-81096607 MsG0780040681.01.T01:intron 55.0%
TTGTTCGCCCAAACGGAGGA+AGG - Chr7:81095050-81095069 MsG0780040681.01.T01:intron 55.0%
! GCCACTGAGTTTGTTCCTCC+TGG - Chr7:81096363-81096382 MsG0780040681.01.T01:intron 55.0%
! GTGCTTTTGTCCGTCACCTC+TGG + Chr7:81096607-81096626 None:intergenic 55.0%
! TCAAGTTGTTTGGGCTCCGG+TGG - Chr7:81090962-81090981 MsG0780040681.01.T01:intron 55.0%
!! AGGTGACGGACAAAAGCACC+AGG - Chr7:81096608-81096627 MsG0780040681.01.T01:intron 55.0%
AAACAGCTGGGTGTGGCTGC+TGG - Chr7:81096712-81096731 MsG0780040681.01.T01:intron 60.0%
AAAGAGGGGTCCAGTCCGTG+AGG + Chr7:81093409-81093428 None:intergenic 60.0%
AAGAGGGGTCCAGTCCGTGA+GGG + Chr7:81093408-81093427 None:intergenic 60.0%
AGTGAAGTGGGAGGTGGAGG+TGG + Chr7:81091607-81091626 None:intergenic 60.0%
GCAAGTGAAGTGGGAGGTGG+AGG + Chr7:81091610-81091629 None:intergenic 60.0%
GCAAGTGCATCCCAACTCCC+AGG - Chr7:81095683-81095702 MsG0780040681.01.T01:intron 60.0%
GGACGTATCCGGGGATTACC+GGG - Chr7:81091002-81091021 MsG0780040681.01.T01:intron 60.0%
GGTCAGTTATTCCGGGACGG+AGG + Chr7:81091957-81091976 None:intergenic 60.0%
GTGGCATGGAGCTCCTAGCA+AGG - Chr7:81090981-81091000 MsG0780040681.01.T01:intron 60.0%
TACCGGGTTCGATTCCCAGG+GGG - Chr7:81091018-81091037 MsG0780040681.01.T01:intron 60.0%
TCCCCGGATACGTCCTTGCT+AGG + Chr7:81090997-81091016 None:intergenic 60.0%
TCCTGTGCTGCCAGAGGTGA+CGG - Chr7:81096594-81096613 MsG0780040681.01.T01:intron 60.0%
TGCTAGGAGCTCCATGCCAC+CGG + Chr7:81090981-81091000 None:intergenic 60.0%
TTCCCCCTGGGAATCGAACC+CGG + Chr7:81091023-81091042 None:intergenic 60.0%
TTGTTTGGGCTCCGGTGGCA+TGG - Chr7:81090967-81090986 MsG0780040681.01.T01:intron 60.0%
! GAGGGCATGGCCTCTCCTTA+AGG - Chr7:81095379-81095398 MsG0780040681.01.T01:intron 60.0%
CATCGCACTCTTCCGGCGCA+TGG - Chr7:81096553-81096572 MsG0780040681.01.T01:intron 65.0%
GAAGTGGGAGGTGGAGGTGG+AGG + Chr7:81091604-81091623 None:intergenic 65.0%
TCCGTCACCTCTGGCAGCAC+AGG + Chr7:81096598-81096617 None:intergenic 65.0%
! CATGCGCCGGAAGAGTGCGA+TGG + Chr7:81096555-81096574 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 81089757 81097357 81089757 ID=MsG0780040681.01;Name=MsG0780040681.01
Chr7 mRNA 81089757 81097357 81089757 ID=MsG0780040681.01.T01;Parent=MsG0780040681.01;Name=MsG0780040681.01.T01;_AED=0.20;_eAED=0.20;_QI=127|1|1|1|0.75|0.6|5|559|348
Chr7 exon 81091871 81092270 81091871 ID=MsG0780040681.01.T01:exon:18783;Parent=MsG0780040681.01.T01
Chr7 exon 81097289 81097357 81097289 ID=MsG0780040681.01.T01:exon:18782;Parent=MsG0780040681.01.T01
Chr7 five_prime_UTR 81097289 81097357 81097289 ID=MsG0780040681.01.T01:five_prime_utr;Parent=MsG0780040681.01.T01
Chr7 five_prime_UTR 81092213 81092270 81092213 ID=MsG0780040681.01.T01:five_prime_utr;Parent=MsG0780040681.01.T01
Chr7 CDS 81091871 81092212 81091871 ID=MsG0780040681.01.T01:cds;Parent=MsG0780040681.01.T01
Chr7 CDS 81091410 81091746 81091410 ID=MsG0780040681.01.T01:cds;Parent=MsG0780040681.01.T01
Chr7 CDS 81090710 81090774 81090710 ID=MsG0780040681.01.T01:cds;Parent=MsG0780040681.01.T01
Chr7 CDS 81090316 81090618 81090316 ID=MsG0780040681.01.T01:cds;Parent=MsG0780040681.01.T01
Chr7 three_prime_UTR 81089757 81090315 81089757 ID=MsG0780040681.01.T01:three_prime_utr;Parent=MsG0780040681.01.T01
Chr7 mRNA 81089757 81092394 81089757 ID=MsG0780040681.01.T02;Parent=MsG0780040681.01;Name=MsG0780040681.01.T02;_AED=0.19;_eAED=0.19;_QI=182|1|1|1|1|1|4|559|348
Chr7 exon 81091871 81092394 81091871 ID=MsG0780040681.01.T02:exon:18787;Parent=MsG0780040681.01.T02
Chr7 five_prime_UTR 81092213 81092394 81092213 ID=MsG0780040681.01.T02:five_prime_utr;Parent=MsG0780040681.01.T02
Chr7 CDS 81091871 81092212 81091871 ID=MsG0780040681.01.T02:cds;Parent=MsG0780040681.01.T02
Chr7 CDS 81091410 81091746 81091410 ID=MsG0780040681.01.T02:cds;Parent=MsG0780040681.01.T02
Chr7 CDS 81090710 81090774 81090710 ID=MsG0780040681.01.T02:cds;Parent=MsG0780040681.01.T02
Chr7 CDS 81090316 81090618 81090316 ID=MsG0780040681.01.T02:cds;Parent=MsG0780040681.01.T02
Chr7 three_prime_UTR 81089757 81090315 81089757 ID=MsG0780040681.01.T02:three_prime_utr;Parent=MsG0780040681.01.T02
Gene Sequence

>MsG0780040681.01.T02

ATGAGCAAAGCAAGGTTAGCAATAATGAATTTATCCCATCTAATGAGTGTCCCTTCTTCTCTAGTTGCCGTAATTGAACTAGATGTTCCGAATACCATTTTCAACAAAGGAAGCAACCTTCCTATGTCGGCTTCCGAGATTTTGGCAATTGTTCGCCCAAACGGAGGAAGGGAAGCAGATAACCTGGAACGTATGCTCAGGTTGTTAACGGCTTACGATATCTTTGAGGAGCACTTGATGAGTAATGGAGTTAGAAAGTTCTCACTTGCAGAGGTGGGTAAATCTCTTGCTGAAGATGAAGACGGTCTCTCTTATGCCCCTTACATGCTTCAACACCACCAGCATGCGTATATGAGGGCATGGCCTCTCCTTAAGGACGTGGTTGAGGACCCATCCACAGAACCATTCCGAAAGGTGAACGGGGAACCAGCACATGACTTTTACGTAAAATATCGAGAACAAATGAAGTTGTTTAACAAAGCTTTTATTGGAATGACCATTCCATTTTTTAGAGAAGTTTTGGAATCATACGATGGGTTTCGTGGTGTGGAAACTTTAGTGGATGTCGGAGGCAATACGGGCATTTCTTTGCAGATTATAATGGCTAAATTCCCAAACATTAGCAAGGGAATCAACTTTGATCTCCCCGAAATTGTTGCAAGTGCATCCCAACTCCCAGGCATAACCCATGTTGGTGGTGATGCCACTGAGTTTGTTCCTCCTGGAGACGCTATCCTGATAAAGTGGTTGTGTTTGGGTCTGTCAGATGAACAATGTAGTACAAGTATGATGAGGAATTGCCATCGCACTCTTCCGGCGCATGGCAAACTTATAATTTGTGATCCTGTGCTGCCAGAGGTGACGGACAAAAGCACCAGGTCAAAGGCTTTGCTAGGTGGGAATGTCTTCATGATGACCATGTACGGGTCAAAAGCAAAACATAGAACTGAAAAGGAGTTCAAACAGCTGGGTGTGGCTGCTGGTTTTTCGAAGTTAAGTGCTTTCTATGTTGATGCATACATGACATTTTTGGAGTATCACAAGTAG

>MsG0780040681.01.T01

ATGAGCAAAGCAAGGTTAGCAATAATGAATTTATCCCATCTAATGAGTGTCCCTTCTTCTCTAGTTGCCGTAATTGAACTAGATGTTCCGAATACCATTTTCAACAAAGGAAGCAACCTTCCTATGTCGGCTTCCGAGATTTTGGCAATTGTTCGCCCAAACGGAGGAAGGGAAGCAGATAACCTGGAACGTATGCTCAGGTTGTTAACGGCTTACGATATCTTTGAGGAGCACTTGATGAGTAATGGAGTTAGAAAGTTCTCACTTGCAGAGGTGGGTAAATCTCTTGCTGAAGATGAAGACGGTCTCTCTTATGCCCCTTACATGCTTCAACACCACCAGCATGCGTATATGAGGGCATGGCCTCTCCTTAAGGACGTGGTTGAGGACCCATCCACAGAACCATTCCGAAAGGTGAACGGGGAACCAGCACATGACTTTTACGTAAAATATCGAGAACAAATGAAGTTGTTTAACAAAGCTTTTATTGGAATGACCATTCCATTTTTTAGAGAAGTTTTGGAATCATACGATGGGTTTCGTGGTGTGGAAACTTTAGTGGATGTCGGAGGCAATACGGGCATTTCTTTGCAGATTATAATGGCTAAATTCCCAAACATTAGCAAGGGAATCAACTTTGATCTCCCCGAAATTGTTGCAAGTGCATCCCAACTCCCAGGCATAACCCATGTTGGTGGTGATGCCACTGAGTTTGTTCCTCCTGGAGACGCTATCCTGATAAAGTGGTTGTGTTTGGGTCTGTCAGATGAACAATGTAGTACAAGTATGATGAGGAATTGCCATCGCACTCTTCCGGCGCATGGCAAACTTATAATTTGTGATCCTGTGCTGCCAGAGGTGACGGACAAAAGCACCAGGTCAAAGGCTTTGCTAGGTGGGAATGTCTTCATGATGACCATGTACGGGTCAAAAGCAAAACATAGAACTGAAAAGGAGTTCAAACAGCTGGGTGTGGCTGCTGGTTTTTCGAAGTTAAGTGCTTTCTATGTTGATGCATACATGACATTTTTGGAGTATCACAAGTAG
Protein sequence

>MsG0780040681.01.T02

MSKARLAIMNLSHLMSVPSSLVAVIELDVPNTIFNKGSNLPMSASEILAIVRPNGGREADNLERMLRLLTAYDIFEEHLMSNGVRKFSLAEVGKSLAEDEDGLSYAPYMLQHHQHAYMRAWPLLKDVVEDPSTEPFRKVNGEPAHDFYVKYREQMKLFNKAFIGMTIPFFREVLESYDGFRGVETLVDVGGNTGISLQIIMAKFPNISKGINFDLPEIVASASQLPGITHVGGDATEFVPPGDAILIKWLCLGLSDEQCSTSMMRNCHRTLPAHGKLIICDPVLPEVTDKSTRSKALLGGNVFMMTMYGSKAKHRTEKEFKQLGVAAGFSKLSAFYVDAYMTFLEYHK*

>MsG0780040681.01.T01

MSKARLAIMNLSHLMSVPSSLVAVIELDVPNTIFNKGSNLPMSASEILAIVRPNGGREADNLERMLRLLTAYDIFEEHLMSNGVRKFSLAEVGKSLAEDEDGLSYAPYMLQHHQHAYMRAWPLLKDVVEDPSTEPFRKVNGEPAHDFYVKYREQMKLFNKAFIGMTIPFFREVLESYDGFRGVETLVDVGGNTGISLQIIMAKFPNISKGINFDLPEIVASASQLPGITHVGGDATEFVPPGDAILIKWLCLGLSDEQCSTSMMRNCHRTLPAHGKLIICDPVLPEVTDKSTRSKALLGGNVFMMTMYGSKAKHRTEKEFKQLGVAAGFSKLSAFYVDAYMTFLEYHK*