AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040925.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040925.01.T01 MTR_7g101150 95.506 89 4 0 46 134 152 240 1.35e-54 175
MsG0780040925.01.T01 MTR_1g064680 70.330 91 27 0 46 136 142 232 1.05e-39 136
MsG0780040925.01.T01 MTR_7g101150 69.663 89 3 1 46 134 152 216 2.33e-31 114
MsG0780040925.01.T01 MTR_2g022210 44.000 75 41 1 46 119 176 250 1.65e-13 66.2
MsG0780040925.01.T01 MTR_4g117250 40.260 77 44 2 45 119 151 227 5.44e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040925.01.T01 AT3G09770 47.368 95 49 1 43 136 166 260 1.74e-24 96.3
MsG0780040925.01.T01 AT3G09770 48.387 93 47 1 43 134 166 258 2.98e-24 96.3
MsG0780040925.01.T01 AT5G03200 47.312 93 49 0 45 137 148 240 2.60e-21 87.8
MsG0780040925.01.T01 AT3G53410 44.444 90 48 1 46 135 100 187 3.10e-16 73.6
MsG0780040925.01.T01 AT5G19080 39.024 82 50 0 47 128 175 256 1.03e-12 64.3
MsG0780040925.01.T01 AT3G06140 44.444 72 40 0 47 118 159 230 4.47e-12 62.4

Find 75 sgRNAs with CRISPR-Local

Find 351 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTTCTCCCTCATTTATTC+TGG 0.202826 7:-84325459 MsG0780040925.01.T01:three_prime_UTR
TGGACTGTACAGGAAGTTTA+TGG 0.242147 7:+84325536 None:intergenic
ACAACCAGTTGAAAGGCTTT+TGG 0.292916 7:-84325607 MsG0780040925.01.T01:three_prime_UTR
ATCTGATCCATCATGATTAC+CGG 0.362191 7:+84326202 None:intergenic
TATGGATCGCTTGGGTTTCT+CGG 0.363151 7:-84330338 MsG0780040925.01.T01:intron
ACTTCTGTCCAAGACCTTGC+TGG 0.386692 7:+84326336 None:intergenic
TATGAGCTGCAGGAGATATA+TGG 0.402009 7:-84326063 MsG0780040925.01.T01:three_prime_UTR
CAGGTTGAACTTGATGAACT+TGG 0.403590 7:-84329959 MsG0780040925.01.T01:CDS
ATCTCCAAAAGCCTTTCAAC+TGG 0.415200 7:+84325603 None:intergenic
GCCTCATCATCATCCTCATA+TGG 0.433411 7:-84330356 MsG0780040925.01.T01:CDS
CAAATCGGCATCTATTTGTC+TGG 0.433539 7:+84325633 None:intergenic
GGAGTCAGATTTAGTAAAGG+TGG 0.440813 7:-84326270 MsG0780040925.01.T01:CDS
TGTTCACCCCTGCCGACATA+TGG 0.446468 7:-84325953 MsG0780040925.01.T01:intron
TCATCCTCATATGGATCGCT+TGG 0.450241 7:-84330347 MsG0780040925.01.T01:CDS
TCAACTGGTTGTCTGCAAAT+CGG 0.451318 7:+84325618 None:intergenic
CTTGGTCTAAAATCAGCTAT+AGG 0.457520 7:-84325387 MsG0780040925.01.T01:three_prime_UTR
TTTAGACAGCAAGCTGGAAC+TGG 0.459183 7:-84326314 MsG0780040925.01.T01:CDS
GCGGTGTTTGAGAAGGAAAA+AGG 0.465111 7:-84326138 MsG0780040925.01.T01:three_prime_UTR
TGAAAATACCAGAATAAATG+AGG 0.476423 7:+84325451 None:intergenic
CTGCAGGAGATATATGGTAT+TGG 0.477865 7:-84326057 MsG0780040925.01.T01:three_prime_UTR
GTACAATTCCAGCAAGGTCT+TGG 0.478019 7:-84326344 MsG0780040925.01.T01:CDS
GATAAAGGTAGGAGGGACTG+AGG 0.478176 7:-84325583 MsG0780040925.01.T01:three_prime_UTR
GTATGGTAGGACAGAATAAT+CGG 0.480135 7:-84329937 MsG0780040925.01.T01:intron
TTCTTTGCAAAAGAAGATGA+AGG 0.485414 7:-84326413 MsG0780040925.01.T01:CDS
TGAATATACCATATGTCGGC+AGG 0.487759 7:+84325945 None:intergenic
CATCCTCATATGGATCGCTT+GGG 0.488898 7:-84330346 MsG0780040925.01.T01:CDS
TTATTACAGTTGGACTGTAC+AGG 0.489581 7:+84325526 None:intergenic
TACAGTCACAGGTGCAAGAT+GGG 0.494387 7:+84326364 None:intergenic
AAGCAGATCTTGTCGGTGAA+TGG 0.499467 7:-84326093 MsG0780040925.01.T01:three_prime_UTR
TGAGGAGTCAGATTTAGTAA+AGG 0.513325 7:-84326273 MsG0780040925.01.T01:CDS
CAAAGTATAATTATTACAGT+TGG 0.516174 7:+84325516 None:intergenic
AAACCCAAGCGATCCATATG+AGG 0.528517 7:+84330343 None:intergenic
AGTTGTTAAGCAGATCTTGT+CGG 0.530254 7:-84326100 MsG0780040925.01.T01:three_prime_UTR
TAACCAGGGTAATGATATTG+AGG 0.535672 7:+84330400 None:intergenic
GCATCATCCGGTAATCATGA+TGG 0.536466 7:-84326209 MsG0780040925.01.T01:CDS
TGGAATGCGGTATGAGCTGC+AGG 0.539501 7:-84326073 MsG0780040925.01.T01:three_prime_UTR
TTTGCAGACAACCAGTTGAA+AGG 0.542468 7:-84325614 MsG0780040925.01.T01:three_prime_UTR
GAGTCAGATTTAGTAAAGGT+GGG 0.543543 7:-84326269 MsG0780040925.01.T01:CDS
GCAAGATGGGTTACCTTGGT+CGG 0.553514 7:+84326377 None:intergenic
GTGAAGGCAGATGCATCATC+CGG 0.554451 7:-84326221 MsG0780040925.01.T01:CDS
TTTAGTAAAGGTGGGTGACA+TGG 0.558071 7:-84326261 MsG0780040925.01.T01:CDS
TGCTGGAATTGTACAGTCAC+AGG 0.558091 7:+84326353 None:intergenic
TGATGAGGCATAGGTATTTG+TGG 0.560266 7:+84330370 None:intergenic
GCATCTGCCTTCACTGCTAG+AGG 0.560301 7:+84326230 None:intergenic
ATTTGTGGTGGATAATAACC+AGG 0.561770 7:+84330385 None:intergenic
TGAGGATGATGATGAGGCAT+AGG 0.565184 7:+84330361 None:intergenic
TGAACTTGATGAACTTGGTA+TGG 0.567407 7:-84329954 MsG0780040925.01.T01:CDS
AACTCAAGCGGTGTTTGAGA+AGG 0.567507 7:-84326145 MsG0780040925.01.T01:three_prime_UTR
CTTGATGAACTTGGTATGGT+AGG 0.570542 7:-84329950 MsG0780040925.01.T01:CDS
TGTTTACCCTCTAGCAGTGA+AGG 0.588610 7:-84326237 MsG0780040925.01.T01:CDS
GAATATACCATATGTCGGCA+GGG 0.589767 7:+84325946 None:intergenic
GGTGGAATTTATATGACACT+TGG 0.602578 7:-84325405 MsG0780040925.01.T01:three_prime_UTR
CTGCATCCTCACACCGACCA+AGG 0.607910 7:-84326390 MsG0780040925.01.T01:CDS
TATCCTCAATATCATTACCC+TGG 0.611148 7:-84330403 MsG0780040925.01.T01:CDS
CAGAAGTTTAGACAGCAAGC+TGG 0.612738 7:-84326320 MsG0780040925.01.T01:CDS
TCCATATGAGGATGATGATG+AGG 0.615819 7:+84330355 None:intergenic
GTACAGTCACAGGTGCAAGA+TGG 0.616443 7:+84326363 None:intergenic
GAAAATACCAGAATAAATGA+GGG 0.619393 7:+84325452 None:intergenic
AATATACCATATGTCGGCAG+GGG 0.619940 7:+84325947 None:intergenic
ATGCTGAATATACCATATGT+CGG 0.621925 7:+84325941 None:intergenic
ATATGGTATTGGAAATTCAG+TGG 0.622521 7:-84326046 MsG0780040925.01.T01:three_prime_UTR
CATCTGCCTTCACTGCTAGA+GGG 0.633223 7:+84326231 None:intergenic
AGGTGCAAGATGGGTTACCT+TGG 0.637199 7:+84326373 None:intergenic
TGATATTGAGGATAATGCAT+GGG 0.642567 7:+84330412 None:intergenic
AAACTCTCAGATAACTCAAG+CGG 0.648497 7:-84326157 MsG0780040925.01.T01:exon
ATGATATTGAGGATAATGCA+TGG 0.652411 7:+84330411 None:intergenic
GGGTGAACAATTGTGTCGCG+AGG 0.663631 7:+84325967 None:intergenic
GGGTTACCTTGGTCGGTGTG+AGG 0.665482 7:+84326384 None:intergenic
CATGTGTAGTGGATGTGCAA+AGG 0.675895 7:-84325666 MsG0780040925.01.T01:three_prime_UTR
AAATTCAGTGGAGAGTGATG+TGG 0.682565 7:-84326034 MsG0780040925.01.T01:three_prime_UTR
GTGACTGTACAATTCCAGCA+AGG 0.698948 7:-84326350 MsG0780040925.01.T01:CDS
TCTTGTCGGTGAATGGAATG+CGG 0.716236 7:-84326086 MsG0780040925.01.T01:three_prime_UTR
TTTGTGGTGGATAATAACCA+GGG 0.720766 7:+84330386 None:intergenic
GATGTGGATGACAATGAACA+AGG 0.723839 7:-84326018 MsG0780040925.01.T01:three_prime_UTR
TGAGGCATAGGTATTTGTGG+TGG 0.724289 7:+84330373 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATATAATGAACTT+CGG + Chr7:84327954-84327973 None:intergenic 10.0%
!! GTATATATACATAATATAAT+AGG + Chr7:84327411-84327430 None:intergenic 10.0%
!! AAATGATGTTAATATTAAGA+AGG - Chr7:84325538-84325557 MsG0780040925.01.T01:three_prime_UTR 15.0%
!! AAATTAGTAGTATTAATTAG+GGG - Chr7:84328169-84328188 MsG0780040925.01.T01:intron 15.0%
!! AAGATACATATATATATGAA+AGG + Chr7:84327196-84327215 None:intergenic 15.0%
!! ACAAATTAGTAGTATTAATT+AGG - Chr7:84328167-84328186 MsG0780040925.01.T01:intron 15.0%
!! CAAATTAGTAGTATTAATTA+GGG - Chr7:84328168-84328187 MsG0780040925.01.T01:intron 15.0%
!! GCAAAGAATTAATAATAAAT+TGG + Chr7:84327682-84327701 None:intergenic 15.0%
!! TAAAATCATAATGATGATTA+TGG - Chr7:84329273-84329292 MsG0780040925.01.T01:intron 15.0%
!! TAATTTCTATGAGATATTAA+GGG + Chr7:84326136-84326155 None:intergenic 15.0%
!! TTAATATCTCATAGAAATTA+GGG - Chr7:84326136-84326155 MsG0780040925.01.T01:three_prime_UTR 15.0%
!! TTCTTGAAGAATTTATTATA+TGG - Chr7:84325904-84325923 MsG0780040925.01.T01:intron 15.0%
!!! AGTTTATTTTTCTTGATTAA+AGG - Chr7:84327110-84327129 MsG0780040925.01.T01:intron 15.0%
!!! ATTGGTCTTATAAAAATTAT+TGG - Chr7:84327656-84327675 MsG0780040925.01.T01:intron 15.0%
!!! ATTTAAAATAGGTTAATTCA+GGG + Chr7:84327622-84327641 None:intergenic 15.0%
!!! CTTTCTTTTCTTTTTTTTTA+TGG - Chr7:84330302-84330321 MsG0780040925.01.T01:intron 15.0%
!!! GTTTATTTTTCTTGATTAAA+GGG - Chr7:84327111-84327130 MsG0780040925.01.T01:intron 15.0%
!!! TGTTTTATAATAAAGTTTAC+AGG - Chr7:84325804-84325823 MsG0780040925.01.T01:intron 15.0%
!!! TTTATTTTTCTTGATTAAAG+GGG - Chr7:84327112-84327131 MsG0780040925.01.T01:intron 15.0%
!! AAAAAAAAAGAAAAGAAAGC+AGG + Chr7:84330301-84330320 None:intergenic 20.0%
!! AAAAAAAAGAAAAGAAAGCA+GGG + Chr7:84330300-84330319 None:intergenic 20.0%
!! ACGAAAAATTCATTCAAAAA+AGG + Chr7:84329867-84329886 None:intergenic 20.0%
!! ATACACAAAATAGCAAAATA+CGG + Chr7:84328333-84328352 None:intergenic 20.0%
!! CAAAGTATAATTATTACAGT+TGG + Chr7:84330269-84330288 None:intergenic 20.0%
!! CTAATTTCTATGAGATATTA+AGG + Chr7:84326137-84326156 None:intergenic 20.0%
!! CTTAATATCTCATAGAAATT+AGG - Chr7:84326135-84326154 MsG0780040925.01.T01:three_prime_UTR 20.0%
!! GGACAAAAATAAAATCAAAT+GGG - Chr7:84328251-84328270 MsG0780040925.01.T01:intron 20.0%
!! TAAATTCTTCAAGAAACATT+TGG + Chr7:84325899-84325918 None:intergenic 20.0%
!! TTTATTACACATACAAACAA+AGG + Chr7:84328126-84328145 None:intergenic 20.0%
!!! CATTTAAAATAGGTTAATTC+AGG + Chr7:84327623-84327642 None:intergenic 20.0%
!!! GAATGTGTTATTAATGTTTT+GGG - Chr7:84325674-84325693 MsG0780040925.01.T01:intron 20.0%
!!! GAATTGTACTTTTATAATGA+AGG + Chr7:84327286-84327305 None:intergenic 20.0%
!!! TAATTTTCAGCAGTTAAATT+TGG + Chr7:84330040-84330059 None:intergenic 20.0%
!!! TATTAACTTTTCAATGTTTG+AGG - Chr7:84329491-84329510 MsG0780040925.01.T01:intron 20.0%
!!! TGAATGTGTTATTAATGTTT+TGG - Chr7:84325673-84325692 MsG0780040925.01.T01:intron 20.0%
!!! TTATTTTTCTTGATTAAAGG+GGG - Chr7:84327113-84327132 MsG0780040925.01.T01:intron 20.0%
!!! TTGTATGTTTTGTTTAAGAA+TGG - Chr7:84325967-84325986 MsG0780040925.01.T01:three_prime_UTR 20.0%
!!! TTTGAAACAATTTCAGTTTT+AGG - Chr7:84329988-84330007 MsG0780040925.01.T01:intron 20.0%
!!! TTTTTTGAAGCACTTATATT+TGG + Chr7:84328795-84328814 None:intergenic 20.0%
! AAAAAAAGAAAAGAAAGCAG+GGG + Chr7:84330299-84330318 None:intergenic 25.0%
! AAACACAACAATATACAAAG+AGG + Chr7:84325728-84325747 None:intergenic 25.0%
! AAATAGATATTTGCCAAGAT+TGG + Chr7:84329946-84329965 None:intergenic 25.0%
! AACACAACAATATACAAAGA+GGG + Chr7:84325727-84325746 None:intergenic 25.0%
! AAGAAATGTGAAAAAAGCAA+AGG + Chr7:84328044-84328063 None:intergenic 25.0%
! AATCAAAATTGTGCTAGTTA+TGG + Chr7:84326092-84326111 None:intergenic 25.0%
! ACATTGTGAGCATTTATAAT+TGG - Chr7:84327225-84327244 MsG0780040925.01.T01:intron 25.0%
! ACTCTGTTGAACTTATAATA+CGG - Chr7:84326798-84326817 MsG0780040925.01.T01:intron 25.0%
! ACTGAAATTGTTTCAAAAGA+AGG + Chr7:84329985-84330004 None:intergenic 25.0%
! ACTGCTGAAAATTACTTATT+TGG - Chr7:84330046-84330065 MsG0780040925.01.T01:intron 25.0%
! AGAAATGTGAAAAAAGCAAA+GGG + Chr7:84328043-84328062 None:intergenic 25.0%
! AGCAAAATACGGAAAATTAA+AGG + Chr7:84328322-84328341 None:intergenic 25.0%
! ATATGAAAGGAAACAAAACA+AGG + Chr7:84327183-84327202 None:intergenic 25.0%
! ATCAATATTATGACCAATCT+TGG - Chr7:84329930-84329949 MsG0780040925.01.T01:intron 25.0%
! ATGCATCTAGTAATTTGAAA+AGG - Chr7:84328215-84328234 MsG0780040925.01.T01:intron 25.0%
! ATGTTGTTAATCTCATATAG+CGG + Chr7:84328462-84328481 None:intergenic 25.0%
! ATTATAGACAAAATATGACG+AGG + Chr7:84328598-84328617 None:intergenic 25.0%
! CAAAATAGAGACTACAATTA+AGG + Chr7:84326426-84326445 None:intergenic 25.0%
! CTTAATCGGTAATGTATATT+AGG + Chr7:84329032-84329051 None:intergenic 25.0%
! GAAAATACCAGAATAAATGA+GGG + Chr7:84330333-84330352 None:intergenic 25.0%
! GGGACAAAAATAAAATCAAA+TGG - Chr7:84328250-84328269 MsG0780040925.01.T01:intron 25.0%
! TACATAATACTCCTTGATAT+GGG + Chr7:84329154-84329173 None:intergenic 25.0%
! TCATCCTGATTACTAAAATA+TGG - Chr7:84326486-84326505 MsG0780040925.01.T01:intron 25.0%
! TGAAAAGGAGTTTACATTTA+GGG - Chr7:84328230-84328249 MsG0780040925.01.T01:intron 25.0%
! TGAAAATACCAGAATAAATG+AGG + Chr7:84330334-84330353 None:intergenic 25.0%
! TGAATGACAAAAGATATTGT+TGG - Chr7:84326392-84326411 MsG0780040925.01.T01:CDS 25.0%
! TGCTCTTAAGTTTACTTAAT+CGG + Chr7:84329046-84329065 None:intergenic 25.0%
! TTACATAATACTCCTTGATA+TGG + Chr7:84329155-84329174 None:intergenic 25.0%
! TTATAAATGCTCACAATGTT+CGG + Chr7:84327224-84327243 None:intergenic 25.0%
! TTGAAAAGGAGTTTACATTT+AGG - Chr7:84328229-84328248 MsG0780040925.01.T01:intron 25.0%
! TTTATAATGAAGGAGGATAT+TGG + Chr7:84327276-84327295 None:intergenic 25.0%
!! CTTAATTGTAGTCTCTATTT+TGG - Chr7:84326424-84326443 MsG0780040925.01.T01:CDS 25.0%
!! TATTAATTAGGGGTATGTTT+AGG - Chr7:84328179-84328198 MsG0780040925.01.T01:intron 25.0%
!! TATTCTGGTATTTTCAATGA+GGG - Chr7:84330338-84330357 MsG0780040925.01.T01:intron 25.0%
!! TTATTCTGGTATTTTCAATG+AGG - Chr7:84330337-84330356 MsG0780040925.01.T01:intron 25.0%
!! TTGTACTTTTATAATGAAGG+AGG + Chr7:84327283-84327302 None:intergenic 25.0%
!!! ACATTACGAACTGATTTTAT+AGG + Chr7:84326178-84326197 None:intergenic 25.0%
!!! AGTATAATGAACTTTTTGGT+GGG + Chr7:84327997-84328016 None:intergenic 25.0%
!!! ATGTTTTGTTTAAGAATGGA+TGG - Chr7:84325971-84325990 MsG0780040925.01.T01:three_prime_UTR 25.0%
!!! CATTACGAACTGATTTTATA+GGG + Chr7:84326177-84326196 None:intergenic 25.0%
!!! TGTTTTGTTTAAGAATGGAT+GGG - Chr7:84325972-84325991 MsG0780040925.01.T01:three_prime_UTR 25.0%
!!! TTAGCCATATTTTAGTAATC+AGG + Chr7:84326493-84326512 None:intergenic 25.0%
AAAATCCCAAGATTCAACAA+TGG - Chr7:84328811-84328830 MsG0780040925.01.T01:intron 30.0%
AAATGTGAAAAAAGCAAAGG+GGG + Chr7:84328041-84328060 None:intergenic 30.0%
AAGTAGCGTTTGTATTAAGT+TGG - Chr7:84327015-84327034 MsG0780040925.01.T01:intron 30.0%
AATAGAGACTACAATTAAGG+AGG + Chr7:84326423-84326442 None:intergenic 30.0%
ACACTAAAAAGATCTATAGC+TGG + Chr7:84327433-84327452 None:intergenic 30.0%
AGTAAGCTAATTGAATGGAA+AGG - Chr7:84326865-84326884 MsG0780040925.01.T01:intron 30.0%
AGTTGATTGAATGATACTGA+TGG - Chr7:84329892-84329911 MsG0780040925.01.T01:intron 30.0%
ATCAAATCGATGTTCAAATC+AGG - Chr7:84328966-84328985 MsG0780040925.01.T01:intron 30.0%
ATCATTCCATTGTTGAATCT+TGG + Chr7:84328820-84328839 None:intergenic 30.0%
ATCTCATAGAAATTAGGGTT+AGG - Chr7:84326141-84326160 MsG0780040925.01.T01:three_prime_UTR 30.0%
ATGCTGAATATACCATATGT+CGG + Chr7:84329844-84329863 None:intergenic 30.0%
ATTCAGAGTTTACATAGACA+TGG + Chr7:84326620-84326639 None:intergenic 30.0%
CAAATGGGTGTTTAGATATA+GGG - Chr7:84328266-84328285 MsG0780040925.01.T01:intron 30.0%
CACTAAAAAGTCTAAGTGAA+AGG - Chr7:84326908-84326927 MsG0780040925.01.T01:intron 30.0%
CATAATGATGATTATGGATG+TGG - Chr7:84329279-84329298 MsG0780040925.01.T01:intron 30.0%
CATACAAACAAAGGACAATT+TGG + Chr7:84328117-84328136 None:intergenic 30.0%
CGTGTTTATGTTTCAAAGTA+AGG - Chr7:84326739-84326758 MsG0780040925.01.T01:intron 30.0%
CTAAAATATGGCTAAGTAGT+AGG - Chr7:84326498-84326517 MsG0780040925.01.T01:intron 30.0%
CTTTACTTTAGTTGTTCTGA+AGG - Chr7:84329306-84329325 MsG0780040925.01.T01:intron 30.0%
GAAATGTGAAAAAAGCAAAG+GGG + Chr7:84328042-84328061 None:intergenic 30.0%
GTCATTCAAATTGTCGTAAT+TGG + Chr7:84326380-84326399 None:intergenic 30.0%
TAAAATCAGTTCGTAATGTG+AGG - Chr7:84326179-84326198 MsG0780040925.01.T01:CDS 30.0%
TCAAATGGGTGTTTAGATAT+AGG - Chr7:84328265-84328284 MsG0780040925.01.T01:intron 30.0%
TCATTCCATTGTTGAATCTT+GGG + Chr7:84328819-84328838 None:intergenic 30.0%
TCTCATAGAAATTAGGGTTA+GGG - Chr7:84326142-84326161 MsG0780040925.01.T01:three_prime_UTR 30.0%
TGAGATATTAAGGGTAGAAA+AGG + Chr7:84326127-84326146 None:intergenic 30.0%
! AAAACAAGGTAGAACCTTTT+CGG + Chr7:84327169-84327188 None:intergenic 30.0%
! AAAGACACAGTTTTCTTGTA+TGG - Chr7:84325761-84325780 MsG0780040925.01.T01:intron 30.0%
! AACATGTTTTCTGTCAAATG+TGG - Chr7:84328567-84328586 MsG0780040925.01.T01:intron 30.0%
! ACATGTTTTCTGTCAAATGT+GGG - Chr7:84328568-84328587 MsG0780040925.01.T01:intron 30.0%
! ATATGGTATTGGAAATTCAG+TGG - Chr7:84329736-84329755 MsG0780040925.01.T01:intron 30.0%
! ATTCTGGTATTTTCAATGAG+GGG - Chr7:84330339-84330358 MsG0780040925.01.T01:CDS 30.0%
! ATTCTTTGCAAACACGTTTT+AGG - Chr7:84327693-84327712 MsG0780040925.01.T01:intron 30.0%
! CTATACTCTATAGCAGTTTT+GGG - Chr7:84328421-84328440 MsG0780040925.01.T01:intron 30.0%
! CTGATTTTATAGGGTTTAGT+GGG + Chr7:84326168-84326187 None:intergenic 30.0%
! GAGTATAATGAACTTTTTGG+TGG + Chr7:84327998-84328017 None:intergenic 30.0%
! TATACTCTATAGCAGTTTTG+GGG - Chr7:84328422-84328441 MsG0780040925.01.T01:intron 30.0%
! TATGGTGTCAAAATAAGAGT+TGG - Chr7:84325922-84325941 MsG0780040925.01.T01:intron 30.0%
! TTCCATTCAATTAGCTTACT+TGG + Chr7:84326865-84326884 None:intergenic 30.0%
!! AACCTATTTTAAATGCTGTC+TGG - Chr7:84327628-84327647 MsG0780040925.01.T01:intron 30.0%
!! ACCTATTTTAAATGCTGTCT+GGG - Chr7:84327629-84327648 MsG0780040925.01.T01:intron 30.0%
!! ACTGATTTTATAGGGTTTAG+TGG + Chr7:84326169-84326188 None:intergenic 30.0%
!! AGGGAGTATAATGAACTTTT+TGG + Chr7:84328001-84328020 None:intergenic 30.0%
!! ATTTTGGCAAATAGAACCAT+TGG - Chr7:84326440-84326459 MsG0780040925.01.T01:intron 30.0%
!! TTTTGCTGCTTACTTTATCA+AGG - Chr7:84327364-84327383 MsG0780040925.01.T01:intron 30.0%
!!! GTTTTGTTTAAGAATGGATG+GGG - Chr7:84325973-84325992 MsG0780040925.01.T01:three_prime_UTR 30.0%
AAACGAAACAAGGAAAAACC+AGG + Chr7:84325594-84325613 None:intergenic 35.0%
AAACTCTCAGATAACTCAAG+CGG - Chr7:84329625-84329644 MsG0780040925.01.T01:intron 35.0%
AATACACAAGTGAGTGTTAC+TGG - Chr7:84329081-84329100 MsG0780040925.01.T01:intron 35.0%
AATGTGAAAAAAGCAAAGGG+GGG + Chr7:84328040-84328059 None:intergenic 35.0%
AATTCAGCCAAAGTATGTCA+CGG + Chr7:84330079-84330098 None:intergenic 35.0%
ACCATTAATTTCACCTGATG+AGG - Chr7:84325563-84325582 MsG0780040925.01.T01:three_prime_UTR 35.0%
AGAAGGAAAAAGGAGAATTC+CGG - Chr7:84329654-84329673 MsG0780040925.01.T01:intron 35.0%
AGTTGTTAAGCAGATCTTGT+CGG - Chr7:84329682-84329701 MsG0780040925.01.T01:intron 35.0%
ATCTGATCCATCATGATTAC+CGG + Chr7:84329583-84329602 None:intergenic 35.0%
ATGAGGGGAAAAAATAGAGA+AGG - Chr7:84330354-84330373 MsG0780040925.01.T01:CDS 35.0%
ATGGAATGATAAGTCTGTGT+AGG - Chr7:84328830-84328849 MsG0780040925.01.T01:intron 35.0%
CCTAATTTCTAAACGTGAGT+CGG - Chr7:84328999-84329018 MsG0780040925.01.T01:intron 35.0%
GAAGCTCTCTACATAGAAAA+CGG - Chr7:84327312-84327331 MsG0780040925.01.T01:intron 35.0%
GAGTCAGATTTAGTAAAGGT+GGG - Chr7:84329513-84329532 MsG0780040925.01.T01:intron 35.0%
GAGTTTACATAGACATGGTT+TGG + Chr7:84326615-84326634 None:intergenic 35.0%
GCACTTATATTTGGCATGTA+TGG + Chr7:84328786-84328805 None:intergenic 35.0%
GCATCAAAGTAAACGAAACA+AGG + Chr7:84325604-84325623 None:intergenic 35.0%
GCTTACTTTATCAAGGTAGT+TGG - Chr7:84327371-84327390 MsG0780040925.01.T01:intron 35.0%
GGTGGAATTTATATGACACT+TGG - Chr7:84330377-84330396 MsG0780040925.01.T01:CDS 35.0%
GTATGGTAGGACAGAATAAT+CGG - Chr7:84325845-84325864 MsG0780040925.01.T01:intron 35.0%
GTTAATTCAGGGATTTCAGT+TGG + Chr7:84327611-84327630 None:intergenic 35.0%
TAACCAGGGTAATGATATTG+AGG + Chr7:84325385-84325404 None:intergenic 35.0%
TAGATTTGCACAGAATCACA+TGG - Chr7:84326653-84326672 MsG0780040925.01.T01:intron 35.0%
TAGCTAGAGTTTACGACTTT+AGG - Chr7:84326565-84326584 MsG0780040925.01.T01:intron 35.0%
TATCCTCAATATCATTACCC+TGG - Chr7:84325379-84325398 MsG0780040925.01.T01:three_prime_UTR 35.0%
TCCTCATCAGGTGAAATTAA+TGG + Chr7:84325567-84325586 None:intergenic 35.0%
TCTTGTAGACTTATTCTACC+AGG + Chr7:84328748-84328767 None:intergenic 35.0%
TGAACTTGATGAACTTGGTA+TGG - Chr7:84325828-84325847 MsG0780040925.01.T01:intron 35.0%
TGAGAGTCTACATAATTGCA+CGG + Chr7:84328714-84328733 None:intergenic 35.0%
TGAGGAGTCAGATTTAGTAA+AGG - Chr7:84329509-84329528 MsG0780040925.01.T01:intron 35.0%
TGAGGGGAAAAAATAGAGAA+GGG - Chr7:84330355-84330374 MsG0780040925.01.T01:CDS 35.0%
TGATGTTGTATTGAGTCTTG+TGG - Chr7:84328941-84328960 MsG0780040925.01.T01:intron 35.0%
TGATTCTGTGCAAATCTATG+AGG + Chr7:84326651-84326670 None:intergenic 35.0%
TGGAATGATAAGTCTGTGTA+GGG - Chr7:84328831-84328850 MsG0780040925.01.T01:intron 35.0%
TGGTTACCTCCAAAATAGTT+TGG - Chr7:84326017-84326036 MsG0780040925.01.T01:three_prime_UTR 35.0%
TTAAAGAGTTGTGGCTATCA+TGG - Chr7:84327526-84327545 MsG0780040925.01.T01:intron 35.0%
TTATGACAATCACTCACACA+TGG + Chr7:84329256-84329275 None:intergenic 35.0%
TTATTACAGTTGGACTGTAC+AGG + Chr7:84330259-84330278 None:intergenic 35.0%
TTGAGGATGATTTGAATGCA+TGG - Chr7:84326676-84326695 MsG0780040925.01.T01:intron 35.0%
TTTATGTTGTTCGCGGTATT+CGG - Chr7:84326056-84326075 MsG0780040925.01.T01:three_prime_UTR 35.0%
! AACAGACTGCCAAACTATTT+TGG + Chr7:84326029-84326048 None:intergenic 35.0%
! AAGTGACAGCTTTAGTTACA+AGG - Chr7:84329109-84329128 MsG0780040925.01.T01:intron 35.0%
! ACTCTCAAGTTTTACAATCC+TGG - Chr7:84328727-84328746 MsG0780040925.01.T01:intron 35.0%
! ATACACAAGTGAGTGTTACT+GGG - Chr7:84329082-84329101 MsG0780040925.01.T01:intron 35.0%
! ATAGTTTGGCAGTCTGTTTT+AGG - Chr7:84326031-84326050 MsG0780040925.01.T01:three_prime_UTR 35.0%
! CTTGGTCTAAAATCAGCTAT+AGG - Chr7:84330395-84330414 MsG0780040925.01.T01:CDS 35.0%
! GCTATACTCTATAGCAGTTT+TGG - Chr7:84328420-84328439 MsG0780040925.01.T01:intron 35.0%
! TAGTTTGGCAGTCTGTTTTA+GGG - Chr7:84326032-84326051 MsG0780040925.01.T01:three_prime_UTR 35.0%
! TCTGCTTAACAACTTTTACC+CGG + Chr7:84329676-84329695 None:intergenic 35.0%
!! AGCGTTTGTATTAAGTTGGT+TGG - Chr7:84327019-84327038 MsG0780040925.01.T01:intron 35.0%
!! ATTTGTGGTGGATAATAACC+AGG + Chr7:84325400-84325419 None:intergenic 35.0%
!! CCTATTTTAAATGCTGTCTG+GGG - Chr7:84327630-84327649 MsG0780040925.01.T01:intron 35.0%
!! TCAAGGAGTATTATGTAAGC+TGG - Chr7:84329157-84329176 MsG0780040925.01.T01:intron 35.0%
!! TGAAAGGCTTTTGGAGATAA+AGG - Chr7:84330184-84330203 MsG0780040925.01.T01:intron 35.0%
!! TTAGGGTTTTATGTTGTTCG+CGG - Chr7:84326049-84326068 MsG0780040925.01.T01:three_prime_UTR 35.0%
!! TTTGTGGTGGATAATAACCA+GGG + Chr7:84325399-84325418 None:intergenic 35.0%
!! TTTTGGAGATAAAGGTAGGA+GGG - Chr7:84330192-84330211 MsG0780040925.01.T01:intron 35.0%
!!! CGACGTTCATTTTTTTCCTT+TGG - Chr7:84327798-84327817 MsG0780040925.01.T01:intron 35.0%
AAATTCAGTGGAGAGTGATG+TGG - Chr7:84329748-84329767 MsG0780040925.01.T01:intron 40.0%
AACTCTTTAATGTGCATCGC+TGG + Chr7:84327516-84327535 None:intergenic 40.0%
AATATACCATATGTCGGCAG+GGG + Chr7:84329838-84329857 None:intergenic 40.0%
AGTGAAAGGCGAATTAGGAA+GGG - Chr7:84327050-84327069 MsG0780040925.01.T01:intron 40.0%
ATCTCCAAAAGCCTTTCAAC+TGG + Chr7:84330182-84330201 None:intergenic 40.0%
CAAATCGGCATCTATTTGTC+TGG + Chr7:84330152-84330171 None:intergenic 40.0%
CATTATCCTCCTTCGCATAT+AGG + Chr7:84328923-84328942 None:intergenic 40.0%
CCGACTCACGTTTAGAAATT+AGG + Chr7:84329002-84329021 None:intergenic 40.0%
CGATGCACATTAAAGAGTTG+TGG - Chr7:84327517-84327536 MsG0780040925.01.T01:intron 40.0%
CTATGTAGAGAGCTTCAAAG+TGG + Chr7:84327308-84327327 None:intergenic 40.0%
CTGCAGGAGATATATGGTAT+TGG - Chr7:84329725-84329744 MsG0780040925.01.T01:intron 40.0%
CTTGATGAACTTGGTATGGT+AGG - Chr7:84325832-84325851 MsG0780040925.01.T01:intron 40.0%
GAAAACTAACCTCCCAGATA+CGG + Chr7:84325629-84325648 None:intergenic 40.0%
GAAGGAAAAAGGAGAATTCC+GGG - Chr7:84329655-84329674 MsG0780040925.01.T01:intron 40.0%
GAATATACCATATGTCGGCA+GGG + Chr7:84329839-84329858 None:intergenic 40.0%
GAGGGGAAAAAATAGAGAAG+GGG - Chr7:84330356-84330375 MsG0780040925.01.T01:CDS 40.0%
GATGTGGATGACAATGAACA+AGG - Chr7:84329764-84329783 MsG0780040925.01.T01:intron 40.0%
GCTTTCTGATGCTCAACAAA+AGG + Chr7:84325506-84325525 None:intergenic 40.0%
GGAGTCAGATTTAGTAAAGG+TGG - Chr7:84329512-84329531 MsG0780040925.01.T01:intron 40.0%
GGCATGTTAAAAGGAGAAAG+TGG - Chr7:84325997-84326016 MsG0780040925.01.T01:three_prime_UTR 40.0%
GGCCAAGTAAGCTAATTGAA+TGG - Chr7:84326860-84326879 MsG0780040925.01.T01:intron 40.0%
GGTTTCTCCCTCATTTATTC+TGG - Chr7:84330323-84330342 MsG0780040925.01.T01:intron 40.0%
GTGAAAGGTGACTACTAAAG+AGG - Chr7:84326923-84326942 MsG0780040925.01.T01:intron 40.0%
TAGCACGATAGTCTTTCCAA+TGG + Chr7:84326459-84326478 None:intergenic 40.0%
TATGAGCTGCAGGAGATATA+TGG - Chr7:84329719-84329738 MsG0780040925.01.T01:intron 40.0%
TCAACTGGTTGTCTGCAAAT+CGG + Chr7:84330167-84330186 None:intergenic 40.0%
TCCTTCGTGCATAGAAAGAA+AGG + Chr7:84327855-84327874 None:intergenic 40.0%
TCCTTTCTTTCTATGCACGA+AGG - Chr7:84327851-84327870 MsG0780040925.01.T01:intron 40.0%
TGAAAGTCATCCACAAGTTC+TGG - Chr7:84328524-84328543 MsG0780040925.01.T01:intron 40.0%
TGAATATACCATATGTCGGC+AGG + Chr7:84329840-84329859 None:intergenic 40.0%
TGATGAGGCATAGGTATTTG+TGG + Chr7:84325415-84325434 None:intergenic 40.0%
TGGACTGTACAGGAAGTTTA+TGG + Chr7:84330249-84330268 None:intergenic 40.0%
TGGGTGTTTAGATATAGGGA+CGG - Chr7:84328270-84328289 MsG0780040925.01.T01:intron 40.0%
TGTTTAGATATAGGGACGGA+GGG - Chr7:84328274-84328293 MsG0780040925.01.T01:intron 40.0%
TTGTTTAAGAATGGATGGGG+AGG - Chr7:84325976-84325995 MsG0780040925.01.T01:three_prime_UTR 40.0%
TTTAGTAAAGGTGGGTGACA+TGG - Chr7:84329521-84329540 MsG0780040925.01.T01:intron 40.0%
TTTGCAGACAACCAGTTGAA+AGG - Chr7:84330168-84330187 MsG0780040925.01.T01:intron 40.0%
! AAACCAGGATTTTCCTCATC+AGG + Chr7:84325579-84325598 None:intergenic 40.0%
! AAATGCTGTCTGGGGTATAT+TGG - Chr7:84327638-84327657 MsG0780040925.01.T01:intron 40.0%
! ACAACCAGTTGAAAGGCTTT+TGG - Chr7:84330175-84330194 MsG0780040925.01.T01:intron 40.0%
! AGGACTGTCTAAGCAAGTTT+TGG - Chr7:84326199-84326218 MsG0780040925.01.T01:CDS 40.0%
! CAGGTTGAACTTGATGAACT+TGG - Chr7:84325823-84325842 MsG0780040925.01.T01:intron 40.0%
! CCCCAGACAGCATTTAAAAT+AGG + Chr7:84327633-84327652 None:intergenic 40.0%
! TACACAAGTGAGTGTTACTG+GGG - Chr7:84329083-84329102 MsG0780040925.01.T01:intron 40.0%
! TCCATATGAGGATGATGATG+AGG + Chr7:84325430-84325449 None:intergenic 40.0%
! TTTTTGCAGTGCATGTGTAG+TGG - Chr7:84330105-84330124 MsG0780040925.01.T01:intron 40.0%
!! AGACTGCCAAACTATTTTGG+AGG + Chr7:84326026-84326045 None:intergenic 40.0%
!! AGGCTTTTGGAGATAAAGGT+AGG - Chr7:84330188-84330207 MsG0780040925.01.T01:intron 40.0%
!! CACAAATGCTTCTAAAGTCC+CGG - Chr7:84328891-84328910 MsG0780040925.01.T01:intron 40.0%
!! CTTTGCAAACACGTTTTAGG+AGG - Chr7:84327696-84327715 MsG0780040925.01.T01:intron 40.0%
!! CTTTTGGAGATAAAGGTAGG+AGG - Chr7:84330191-84330210 MsG0780040925.01.T01:intron 40.0%
AAACCCAAGCGATCCATATG+AGG + Chr7:84325442-84325461 None:intergenic 45.0%
AAAGGCGAATTAGGAAGGGA+TGG - Chr7:84327054-84327073 MsG0780040925.01.T01:intron 45.0%
AACTCAAGCGGTGTTTGAGA+AGG - Chr7:84329637-84329656 MsG0780040925.01.T01:intron 45.0%
AAGAAGTGGAGGGTAGCTAA+AGG - Chr7:84326960-84326979 MsG0780040925.01.T01:intron 45.0%
AAGAGGTGGAGAGTAAGAAG+TGG - Chr7:84326946-84326965 MsG0780040925.01.T01:intron 45.0%
AAGCAGATCTTGTCGGTGAA+TGG - Chr7:84329689-84329708 MsG0780040925.01.T01:intron 45.0%
AAGGCGAATTAGGAAGGGAT+GGG - Chr7:84327055-84327074 MsG0780040925.01.T01:intron 45.0%
ACTTTGATGCTGCCGTATCT+GGG - Chr7:84325614-84325633 MsG0780040925.01.T01:three_prime_UTR 45.0%
AGAAGTGGAGGGTAGCTAAA+GGG - Chr7:84326961-84326980 MsG0780040925.01.T01:intron 45.0%
AGCAAAGGGGGGTTACATTA+AGG + Chr7:84328029-84328048 None:intergenic 45.0%
AGTGAGATTGCGTGTGAGTT+GGG - Chr7:84327143-84327162 MsG0780040925.01.T01:intron 45.0%
ATAGTTTCGCAGGCGCTATT+AGG - Chr7:84327581-84327600 MsG0780040925.01.T01:intron 45.0%
ATTCAAGTGCTACAACTGCG+AGG + Chr7:84328870-84328889 None:intergenic 45.0%
ATTCAGCCAACCAGAACTTG+TGG + Chr7:84328537-84328556 None:intergenic 45.0%
CAGAAGTTTAGACAGCAAGC+TGG - Chr7:84329462-84329481 MsG0780040925.01.T01:intron 45.0%
CAGTGAAAGGCGAATTAGGA+AGG - Chr7:84327049-84327068 MsG0780040925.01.T01:intron 45.0%
CATCCTCATATGGATCGCTT+GGG - Chr7:84325436-84325455 MsG0780040925.01.T01:three_prime_UTR 45.0%
CATGAACCTATATGCGAAGG+AGG - Chr7:84328914-84328933 MsG0780040925.01.T01:intron 45.0%
CATGATTTCGCTGCTATGTG+CGG + Chr7:84327552-84327571 None:intergenic 45.0%
CTCTTTGCTCTCCCATATCA+AGG - Chr7:84329140-84329159 MsG0780040925.01.T01:intron 45.0%
CTTCGCATATAGGTTCATGC+CGG + Chr7:84328913-84328932 None:intergenic 45.0%
GACTACTAAAGAGGAAGAGG+TGG - Chr7:84326932-84326951 MsG0780040925.01.T01:intron 45.0%
GCAAAGGGGGGTTACATTAA+GGG + Chr7:84328028-84328047 None:intergenic 45.0%
GCATCATCCGGTAATCATGA+TGG - Chr7:84329573-84329592 MsG0780040925.01.T01:intron 45.0%
GCCTCATCATCATCCTCATA+TGG - Chr7:84325426-84325445 MsG0780040925.01.T01:three_prime_UTR 45.0%
GCGGTGTTTGAGAAGGAAAA+AGG - Chr7:84329644-84329663 MsG0780040925.01.T01:intron 45.0%
GGAAAGCAACAGAACAGAGA+AGG + Chr7:84327834-84327853 None:intergenic 45.0%
GGGAAAAAATAGAGAAGGGG+TGG - Chr7:84330359-84330378 MsG0780040925.01.T01:CDS 45.0%
GGTAGCTAAAGGGAGAGAAA+AGG - Chr7:84326971-84326990 MsG0780040925.01.T01:intron 45.0%
GGTGACTACTAAAGAGGAAG+AGG - Chr7:84326929-84326948 MsG0780040925.01.T01:intron 45.0%
GTACAATTCCAGCAAGGTCT+TGG - Chr7:84329438-84329457 MsG0780040925.01.T01:intron 45.0%
GTGACTGTACAATTCCAGCA+AGG - Chr7:84329432-84329451 MsG0780040925.01.T01:intron 45.0%
GTGTTTAGATATAGGGACGG+AGG - Chr7:84328273-84328292 MsG0780040925.01.T01:intron 45.0%
GTTAATCTCATATAGCGGCG+TGG + Chr7:84328457-84328476 None:intergenic 45.0%
GTTGCAGTGAAAGGCGAATT+AGG - Chr7:84327045-84327064 MsG0780040925.01.T01:intron 45.0%
TACAGTCACAGGTGCAAGAT+GGG + Chr7:84329421-84329440 None:intergenic 45.0%
TACTTTGATGCTGCCGTATC+TGG - Chr7:84325613-84325632 MsG0780040925.01.T01:three_prime_UTR 45.0%
TAGTGAGATTGCGTGTGAGT+TGG - Chr7:84327142-84327161 MsG0780040925.01.T01:intron 45.0%
TAGTTTCGCAGGCGCTATTA+GGG - Chr7:84327582-84327601 MsG0780040925.01.T01:intron 45.0%
TATGGATCGCTTGGGTTTCT+CGG - Chr7:84325444-84325463 MsG0780040925.01.T01:three_prime_UTR 45.0%
TCACCTGATGAGGAAAATCC+TGG - Chr7:84325573-84325592 MsG0780040925.01.T01:three_prime_UTR 45.0%
TCATCCTCATATGGATCGCT+TGG - Chr7:84325435-84325454 MsG0780040925.01.T01:three_prime_UTR 45.0%
TCCTTGACATGTGTCAACGA+CGG + Chr7:84326232-84326251 None:intergenic 45.0%
TCGTAGCAACAAACAGCAGA+AGG + Chr7:84327781-84327800 None:intergenic 45.0%
TCTTGTCGGTGAATGGAATG+CGG - Chr7:84329696-84329715 MsG0780040925.01.T01:intron 45.0%
TGAGGCATAGGTATTTGTGG+TGG + Chr7:84325412-84325431 None:intergenic 45.0%
TGCACAGAATCACATGGTTG+AGG - Chr7:84326659-84326678 MsG0780040925.01.T01:intron 45.0%
TGCTGGAATTGTACAGTCAC+AGG + Chr7:84329432-84329451 None:intergenic 45.0%
TGTTTACCCTCTAGCAGTGA+AGG - Chr7:84329545-84329564 MsG0780040925.01.T01:intron 45.0%
TTCGCATATAGGTTCATGCC+GGG + Chr7:84328912-84328931 None:intergenic 45.0%
TTTAGACAGCAAGCTGGAAC+TGG - Chr7:84329468-84329487 MsG0780040925.01.T01:intron 45.0%
! AGGATGCTGCTCTGTTTTGT+TGG - Chr7:84327871-84327890 MsG0780040925.01.T01:intron 45.0%
! AGTCATCCACAAGTTCTGGT+TGG - Chr7:84328528-84328547 MsG0780040925.01.T01:intron 45.0%
! TGAGGATGATGATGAGGCAT+AGG + Chr7:84325424-84325443 None:intergenic 45.0%
! TGATGCTCAACAAAAGGTGC+AGG + Chr7:84325500-84325519 None:intergenic 45.0%
!! CATGTGTAGTGGATGTGCAA+AGG - Chr7:84330116-84330135 MsG0780040925.01.T01:intron 45.0%
!! CGGGACTTTAGAAGCATTTG+TGG + Chr7:84328893-84328912 None:intergenic 45.0%
ACCGTCGTTGACACATGTCA+AGG - Chr7:84326228-84326247 MsG0780040925.01.T01:CDS 50.0%
ACTTCTGTCCAAGACCTTGC+TGG + Chr7:84329449-84329468 None:intergenic 50.0%
AGAAGGACACTTCACGCCAA+AGG + Chr7:84327817-84327836 None:intergenic 50.0%
AGGCGAATTAGGAAGGGATG+GGG - Chr7:84327056-84327075 MsG0780040925.01.T01:intron 50.0%
AGGGGGGTTACATTAAGGGA+CGG + Chr7:84328024-84328043 None:intergenic 50.0%
AGGTGGAGAGTAAGAAGTGG+AGG - Chr7:84326949-84326968 MsG0780040925.01.T01:intron 50.0%
ATGTTGTTCGCGGTATTCGG+AGG - Chr7:84326059-84326078 MsG0780040925.01.T01:three_prime_UTR 50.0%
CATCTGCCTTCACTGCTAGA+GGG + Chr7:84329554-84329573 None:intergenic 50.0%
CGCTCATACTGACGTGCATA+TGG - Chr7:84326839-84326858 MsG0780040925.01.T01:intron 50.0%
CGGCATGAACCTATATGCGA+AGG - Chr7:84328911-84328930 MsG0780040925.01.T01:intron 50.0%
GATAAAGGTAGGAGGGACTG+AGG - Chr7:84330199-84330218 MsG0780040925.01.T01:intron 50.0%
GCCAAAGTATGTCACGGACT+CGG + Chr7:84330073-84330092 None:intergenic 50.0%
GCCTGCGAAACTATCGAACA+GGG + Chr7:84327575-84327594 None:intergenic 50.0%
GCGGCTGATTGGAGAAAGAA+GGG - Chr7:84327085-84327104 MsG0780040925.01.T01:intron 50.0%
GGCCACTTCGTCTAGAGATA+CGG + Chr7:84326359-84326378 None:intergenic 50.0%
GGGTTACATTAAGGGACGGA+GGG + Chr7:84328020-84328039 None:intergenic 50.0%
GGTGGAGAGTAAGAAGTGGA+GGG - Chr7:84326950-84326969 MsG0780040925.01.T01:intron 50.0%
GTACAGTCACAGGTGCAAGA+TGG + Chr7:84329422-84329441 None:intergenic 50.0%
GTGAAGGCAGATGCATCATC+CGG - Chr7:84329561-84329580 MsG0780040925.01.T01:intron 50.0%
GTTTCTCGGTACTACCCTTG+TGG - Chr7:84325458-84325477 MsG0780040925.01.T01:three_prime_UTR 50.0%
TCCGAGTCCGTGACATACTT+TGG - Chr7:84330069-84330088 MsG0780040925.01.T01:intron 50.0%
TGCCGTATCTCTAGACGAAG+TGG - Chr7:84326354-84326373 MsG0780040925.01.T01:CDS 50.0%
TGTCAATCGCGCTGCTATAG+CGG - Chr7:84327467-84327486 MsG0780040925.01.T01:intron 50.0%
! GGATGGGGAGGCATGTTAAA+AGG - Chr7:84325988-84326007 MsG0780040925.01.T01:three_prime_UTR 50.0%
!! AGGTGCAAGATGGGTTACCT+TGG + Chr7:84329412-84329431 None:intergenic 50.0%
!! AGGTGCAGGTTGATTCACCA+CGG + Chr7:84325486-84325505 None:intergenic 50.0%
!! GCAAGATGGGTTACCTTGGT+CGG + Chr7:84329408-84329427 None:intergenic 50.0%
!! GGTTGGTGAGTTGCAGTGAA+AGG - Chr7:84327036-84327055 MsG0780040925.01.T01:intron 50.0%
ACTGAGCTAGCTACTTGGCG+CGG - Chr7:84326287-84326306 MsG0780040925.01.T01:CDS 55.0%
AGAAGGATGTGTCGCGGTCA+AGG + Chr7:84327740-84327759 None:intergenic 55.0%
AGCGTCTCACAGGACCAAGA+AGG + Chr7:84327757-84327776 None:intergenic 55.0%
CGCACACTGAGCTAGCTACT+TGG - Chr7:84326282-84326301 MsG0780040925.01.T01:CDS 55.0%
CGCCTGCGAAACTATCGAAC+AGG + Chr7:84327576-84327595 None:intergenic 55.0%
GATTCACCACGGGTCCACAA+GGG + Chr7:84325475-84325494 None:intergenic 55.0%
GCATCTGCCTTCACTGCTAG+AGG + Chr7:84329555-84329574 None:intergenic 55.0%
GCCCTGTTCGATAGTTTCGC+AGG - Chr7:84327571-84327590 MsG0780040925.01.T01:intron 55.0%
GGACCAAGAAGGATGTGTCG+CGG + Chr7:84327746-84327765 None:intergenic 55.0%
GGCGAATTAGGAAGGGATGG+GGG - Chr7:84327057-84327076 MsG0780040925.01.T01:intron 55.0%
GGCGGCTGATTGGAGAAAGA+AGG - Chr7:84327084-84327103 MsG0780040925.01.T01:intron 55.0%
GGGGTTACATTAAGGGACGG+AGG + Chr7:84328021-84328040 None:intergenic 55.0%
GGGTGAACAATTGTGTCGCG+AGG + Chr7:84329818-84329837 None:intergenic 55.0%
TGACCGCGACACATCCTTCT+TGG - Chr7:84327740-84327759 MsG0780040925.01.T01:intron 55.0%
TGATTCACCACGGGTCCACA+AGG + Chr7:84325476-84325495 None:intergenic 55.0%
TGGAATGCGGTATGAGCTGC+AGG - Chr7:84329709-84329728 MsG0780040925.01.T01:intron 55.0%
TGTTCACCCCTGCCGACATA+TGG - Chr7:84329829-84329848 MsG0780040925.01.T01:intron 55.0%
TTAGGAAGGGATGGGGGAGA+TGG - Chr7:84327063-84327082 MsG0780040925.01.T01:intron 55.0%
TTGATGCTGCCGTATCTGGG+AGG - Chr7:84325617-84325636 MsG0780040925.01.T01:three_prime_UTR 55.0%
TTGTTCGCGGTATTCGGAGG+TGG - Chr7:84326062-84326081 MsG0780040925.01.T01:three_prime_UTR 55.0%
!! AGCAGAAGGAAGCGTCTCAC+AGG + Chr7:84327767-84327786 None:intergenic 55.0%
!! CTGCTATAGCGGACAATCGC+GGG - Chr7:84327478-84327497 MsG0780040925.01.T01:intron 55.0%
!! GCTGCTATAGCGGACAATCG+CGG - Chr7:84327477-84327496 MsG0780040925.01.T01:intron 55.0%
!! GGTGCAGGTTGATTCACCAC+GGG + Chr7:84325485-84325504 None:intergenic 55.0%
CTGCATCCTCACACCGACCA+AGG - Chr7:84329392-84329411 MsG0780040925.01.T01:intron 60.0%
GGGTTACCTTGGTCGGTGTG+AGG + Chr7:84329401-84329420 None:intergenic 60.0%
GTACTACCCTTGTGGACCCG+TGG - Chr7:84325466-84325485 MsG0780040925.01.T01:three_prime_UTR 60.0%
! GCGTGTGAGTTGGGCCGAAA+AGG - Chr7:84327152-84327171 MsG0780040925.01.T01:intron 60.0%
GGAAGGGATGGGGGAGATGG+CGG - Chr7:84327066-84327085 MsG0780040925.01.T01:intron 65.0%
! TGGGGGAGATGGCGGCTGAT+TGG - Chr7:84327074-84327093 MsG0780040925.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 84325373 84330431 84325373 ID=MsG0780040925.01;Name=MsG0780040925.01
Chr7 mRNA 84325373 84330431 84325373 ID=MsG0780040925.01.T01;Parent=MsG0780040925.01;Name=MsG0780040925.01.T01;_AED=0.25;_eAED=0.26;_QI=0|0.33|0.5|0.75|0.66|0.5|4|530|138
Chr7 exon 84325373 84325690 84325373 ID=MsG0780040925.01.T01:exon:2388;Parent=MsG0780040925.01.T01
Chr7 exon 84325954 84326448 84325954 ID=MsG0780040925.01.T01:exon:2387;Parent=MsG0780040925.01.T01
Chr7 exon 84329938 84329978 84329938 ID=MsG0780040925.01.T01:exon:2386;Parent=MsG0780040925.01.T01
Chr7 exon 84330339 84330431 84330339 ID=MsG0780040925.01.T01:exon:2385;Parent=MsG0780040925.01.T01
Chr7 CDS 84330339 84330431 84330339 ID=MsG0780040925.01.T01:cds;Parent=MsG0780040925.01.T01
Chr7 CDS 84329938 84329978 84329938 ID=MsG0780040925.01.T01:cds;Parent=MsG0780040925.01.T01
Chr7 CDS 84326166 84326448 84326166 ID=MsG0780040925.01.T01:cds;Parent=MsG0780040925.01.T01
Chr7 three_prime_UTR 84325954 84326165 84325954 ID=MsG0780040925.01.T01:three_prime_utr;Parent=MsG0780040925.01.T01
Chr7 three_prime_UTR 84325373 84325690 84325373 ID=MsG0780040925.01.T01:three_prime_utr;Parent=MsG0780040925.01.T01
Gene Sequence

>MsG0780040925.01.T01

ATGCATTATCCTCAATATCATTACCCTGGTTATTATCCACCACAAATACCTATGCCTCATCATCATCCTCATATGGATCGCTTGGGTTTCTCGGTTGAACTTGATGAACTTGGTATGGTAGGACAGAATAATCGCATCACCATATTTTTCTTTGCAAAAGAAGATGAAGGCTGCATCCTCACACCGACCAAGGTAACCCATCTTGCACCTGTGACTGTACAATTCCAGCAAGGTCTTGGACAGAAGTTTAGACAGCAAGCTGGAACTGGTATTAACTTTTCAATGTTTGAGGAGTCAGATTTAGTAAAGGTGGGTGACATGGATGTTTACCCTCTAGCAGTGAAGGCAGATGCATCATCCGGTAATCATGATGGATCAGATGAAACTGAGACATCTAGTAAACAAACTCTCAGATAA
Protein sequence

>MsG0780040925.01.T01

MHYPQYHYPGYYPPQIPMPHHHPHMDRLGFSVELDELGMVGQNNRITIFFFAKEDEGCILTPTKVTHLAPVTVQFQQGLGQKFRQQAGTGINFSMFEESDLVKVGDMDVYPLAVKADASSGNHDGSDETETSSKQTLR*