Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041663.01.T01 | XP_013450547.1 | 90.574 | 244 | 8 | 1 | 26 | 269 | 321 | 549 | 1.56E-154 | 452 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041663.01.T01 | Q8GWB7 | 52.653 | 245 | 92 | 4 | 26 | 269 | 316 | 537 | 4.75E-66 | 217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041663.01.T01 | A0A072UFK8 | 90.574 | 244 | 8 | 1 | 26 | 269 | 321 | 549 | 7.47e-155 | 452 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048036.01 | MsG0780041663.01 | 0.802269 | 6.077235e-49 | 2.964199e-46 |
| MsG0080048059.01 | MsG0780041663.01 | -0.815719 | 8.005047e-52 | 5.561933e-49 |
| MsG0080048345.01 | MsG0780041663.01 | 0.812141 | 4.920904e-51 | 3.103918e-48 |
| MsG0080048347.01 | MsG0780041663.01 | 0.831991 | 1.219639e-55 | 1.345441e-52 |
| MsG0080048352.01 | MsG0780041663.01 | 0.842801 | 2.070874e-58 | 3.175525e-55 |
| MsG0080048887.01 | MsG0780041663.01 | -0.800856 | 1.184500e-48 | 5.574284e-46 |
| MsG0080048889.01 | MsG0780041663.01 | 0.802962 | 4.374113e-49 | 2.171404e-46 |
| MsG0080048904.01 | MsG0780041663.01 | 0.815318 | 9.829098e-52 | 6.754363e-49 |
| MsG0080048918.01 | MsG0780041663.01 | -0.819298 | 1.249835e-52 | 9.579719e-50 |
| MsG0080048919.01 | MsG0780041663.01 | -0.844609 | 6.798038e-59 | 1.103432e-55 |
| MsG0080049019.01 | MsG0780041663.01 | -0.824876 | 6.363519e-54 | 5.708582e-51 |
| MsG0080049023.01 | MsG0780041663.01 | -0.812526 | 4.055753e-51 | 2.584799e-48 |
| MsG0080049024.01 | MsG0780041663.01 | -0.831521 | 1.592361e-55 | 1.732304e-52 |
| MsG0080049062.01 | MsG0780041663.01 | -0.818053 | 2.395905e-52 | 1.774425e-49 |
| MsG0080049066.01 | MsG0780041663.01 | -0.852636 | 4.053656e-61 | 8.524326e-58 |
| MsG0080049133.01 | MsG0780041663.01 | -0.842606 | 2.334068e-58 | 3.557607e-55 |
| MsG0180000234.01 | MsG0780041663.01 | 0.806089 | 9.743313e-50 | 5.241549e-47 |
| MsG0180000322.01 | MsG0780041663.01 | -0.834157 | 3.524934e-56 | 4.147565e-53 |
| MsG0180000337.01 | MsG0780041663.01 | 0.808472 | 3.045844e-50 | 1.743146e-47 |
| MsG0180000467.01 | MsG0780041663.01 | -0.846061 | 2.752215e-59 | 4.679673e-56 |
| MsG0180000583.01 | MsG0780041663.01 | 0.849243 | 3.664346e-60 | 6.904233e-57 |
| MsG0180000929.01 | MsG0780041663.01 | 0.808095 | 3.664202e-50 | 2.076347e-47 |
| MsG0180001116.01 | MsG0780041663.01 | -0.821468 | 3.973239e-53 | 3.235037e-50 |
| MsG0180001827.01 | MsG0780041663.01 | -0.819836 | 9.421799e-53 | 7.331546e-50 |
| MsG0180002099.01 | MsG0780041663.01 | -0.854016 | 1.629140e-61 | 3.588561e-58 |
| MsG0180002425.01 | MsG0780041663.01 | -0.821498 | 3.909889e-53 | 3.186159e-50 |
| MsG0180002809.01 | MsG0780041663.01 | -0.841403 | 4.853996e-58 | 7.124923e-55 |
| MsG0180003114.01 | MsG0780041663.01 | -0.853504 | 2.287949e-61 | 4.954847e-58 |
| MsG0180003235.01 | MsG0780041663.01 | 0.810275 | 1.250015e-50 | 7.502384e-48 |
| MsG0180003350.01 | MsG0780041663.01 | -0.829987 | 3.784405e-55 | 3.935627e-52 |
| MsG0180003351.01 | MsG0780041663.01 | -0.831250 | 1.856396e-55 | 2.003122e-52 |
| MsG0180003405.01 | MsG0780041663.01 | -0.809592 | 1.753021e-50 | 1.033531e-47 |
| MsG0180003757.01 | MsG0780041663.01 | -0.846748 | 1.787297e-59 | 3.107435e-56 |
| MsG0180003758.01 | MsG0780041663.01 | -0.844934 | 5.559217e-59 | 9.116631e-56 |
| MsG0180003759.01 | MsG0780041663.01 | -0.801714 | 7.905351e-49 | 3.801597e-46 |
| MsG0180003779.01 | MsG0780041663.01 | -0.802917 | 4.467355e-49 | 2.215241e-46 |
| MsG0180003980.01 | MsG0780041663.01 | -0.808783 | 2.613830e-50 | 1.507977e-47 |
| MsG0180003985.01 | MsG0780041663.01 | -0.825865 | 3.712874e-54 | 3.425839e-51 |
| MsG0180004177.01 | MsG0780041663.01 | -0.802258 | 6.110846e-49 | 2.979683e-46 |
| MsG0180004292.01 | MsG0780041663.01 | -0.802260 | 6.103514e-49 | 2.976295e-46 |
| MsG0180004322.01 | MsG0780041663.01 | -0.835694 | 1.445269e-56 | 1.781118e-53 |
| MsG0180004502.01 | MsG0780041663.01 | -0.841783 | 3.853275e-58 | 5.722755e-55 |
| MsG0180004553.01 | MsG0780041663.01 | -0.851519 | 8.419599e-61 | 1.708548e-57 |
| MsG0180004580.01 | MsG0780041663.01 | -0.846985 | 1.539623e-59 | 2.696942e-56 |
| MsG0180004581.01 | MsG0780041663.01 | -0.857433 | 1.637501e-62 | 4.040704e-59 |
| MsG0180004634.01 | MsG0780041663.01 | -0.818343 | 2.059195e-52 | 1.537472e-49 |
| MsG0180004643.01 | MsG0780041663.01 | 0.824680 | 7.079809e-54 | 6.315641e-51 |
| MsG0180004658.01 | MsG0780041663.01 | 0.804137 | 2.495808e-49 | 1.276916e-46 |
| MsG0180004737.01 | MsG0780041663.01 | -0.810382 | 1.184916e-50 | 7.131662e-48 |
| MsG0180004757.01 | MsG0780041663.01 | 0.822367 | 2.459883e-53 | 2.054951e-50 |
| MsG0180004773.01 | MsG0780041663.01 | -0.859835 | 3.141505e-63 | 8.411903e-60 |
| MsG0180004941.01 | MsG0780041663.01 | 0.802104 | 6.571370e-49 | 3.191662e-46 |
| MsG0180004942.01 | MsG0780041663.01 | 0.819596 | 1.068988e-52 | 8.262491e-50 |
| MsG0180005272.01 | MsG0780041663.01 | 0.827952 | 1.177376e-54 | 1.153822e-51 |
| MsG0180005328.01 | MsG0780041663.01 | 0.851680 | 7.580261e-61 | 1.546252e-57 |
| MsG0180005356.01 | MsG0780041663.01 | 0.842125 | 3.128974e-58 | 4.697776e-55 |
| MsG0180005357.01 | MsG0780041663.01 | 0.822791 | 1.960909e-53 | 1.657839e-50 |
| MsG0180005358.01 | MsG0780041663.01 | 0.830437 | 2.938017e-55 | 3.095266e-52 |
| MsG0180005369.01 | MsG0780041663.01 | -0.804808 | 1.808255e-49 | 9.413471e-47 |
| MsG0180005471.01 | MsG0780041663.01 | 0.809090 | 2.246553e-50 | 1.306843e-47 |
| MsG0180005474.01 | MsG0780041663.01 | -0.860123 | 2.572775e-63 | 6.957795e-60 |
| MsG0180005542.01 | MsG0780041663.01 | 0.814726 | 1.330449e-51 | 8.996883e-49 |
| MsG0180005648.01 | MsG0780041663.01 | 0.830901 | 2.261563e-55 | 2.415557e-52 |
| MsG0180005833.01 | MsG0780041663.01 | -0.818170 | 2.254440e-52 | 1.675059e-49 |
| MsG0180005848.01 | MsG0780041663.01 | -0.803756 | 2.994109e-49 | 1.516989e-46 |
| MsG0180005865.01 | MsG0780041663.01 | 0.803075 | 4.144344e-49 | 2.063166e-46 |
| MsG0180006212.01 | MsG0780041663.01 | -0.836812 | 7.513265e-57 | 9.575624e-54 |
| MsG0180006227.01 | MsG0780041663.01 | -0.842758 | 2.126344e-58 | 3.256060e-55 |
| MsG0280006381.01 | MsG0780041663.01 | -0.861537 | 9.572657e-64 | 2.717975e-60 |
| MsG0280006446.01 | MsG0780041663.01 | 0.801471 | 8.864467e-49 | 4.236876e-46 |
| MsG0280006452.01 | MsG0780041663.01 | -0.833189 | 6.153155e-56 | 7.033727e-53 |
| MsG0780040321.01 | MsG0780041663.01 | -0.818132 | 2.299247e-52 | 1.706576e-49 |
| MsG0780040352.01 | MsG0780041663.01 | -0.801207 | 1.003838e-48 | 4.766116e-46 |
| MsG0780040429.01 | MsG0780041663.01 | -0.825093 | 5.656592e-54 | 5.105728e-51 |
| MsG0780040685.01 | MsG0780041663.01 | -0.844273 | 8.371766e-59 | 1.344572e-55 |
| MsG0780040805.01 | MsG0780041663.01 | 0.818814 | 1.610292e-52 | 1.217917e-49 |
| MsG0780040806.01 | MsG0780041663.01 | 0.821397 | 4.126040e-53 | 3.352984e-50 |
| MsG0780040838.01 | MsG0780041663.01 | -0.809884 | 1.517651e-50 | 9.016261e-48 |
| MsG0780040892.01 | MsG0780041663.01 | -0.860472 | 2.016681e-63 | 5.519149e-60 |
| MsG0780040925.01 | MsG0780041663.01 | 0.826686 | 2.367229e-54 | 2.235746e-51 |
| MsG0780040995.01 | MsG0780041663.01 | 0.834394 | 3.074423e-56 | 3.643713e-53 |
| MsG0780041025.01 | MsG0780041663.01 | 0.813799 | 2.131760e-51 | 1.405814e-48 |
| MsG0780041035.01 | MsG0780041663.01 | -0.811676 | 6.213620e-51 | 3.870216e-48 |
| MsG0780041106.01 | MsG0780041663.01 | -0.803210 | 3.886648e-49 | 1.941692e-46 |
| MsG0780041254.01 | MsG0780041663.01 | -0.806684 | 7.300170e-50 | 3.987162e-47 |
| MsG0780041316.01 | MsG0780041663.01 | 0.854254 | 1.391430e-61 | 3.089192e-58 |
| MsG0780041478.01 | MsG0780041663.01 | -0.828948 | 6.766538e-55 | 6.825984e-52 |
| MsG0780041556.01 | MsG0780041663.01 | 0.853408 | 2.437970e-61 | 5.262519e-58 |
| MsG0780041620.01 | MsG0780041663.01 | -0.855128 | 7.762977e-62 | 1.773682e-58 |
| MsG0780041663.01 | MsG0780041691.01 | -0.837990 | 3.751409e-57 | 4.956912e-54 |
| MsG0780041663.01 | MsG0780041720.01 | -0.839611 | 1.428982e-57 | 1.983809e-54 |
| MsG0780041663.01 | MsG0780041783.01 | -0.850832 | 1.315543e-60 | 2.610625e-57 |
| MsG0780041663.01 | MsG0780041809.01 | -0.855597 | 5.670159e-62 | 1.315971e-58 |
| MsG0780041663.01 | MsG0880041835.01 | -0.861741 | 8.292475e-64 | 2.369925e-60 |
| MsG0780041663.01 | MsG0880041855.01 | -0.849088 | 4.046584e-60 | 7.585183e-57 |
| MsG0780041663.01 | MsG0880041908.01 | -0.811343 | 7.342714e-51 | 4.533472e-48 |
| MsG0780041663.01 | MsG0880042043.01 | -0.803835 | 2.883390e-49 | 1.463871e-46 |
| MsG0780041663.01 | MsG0880042291.01 | -0.801938 | 7.110325e-49 | 3.438805e-46 |
| MsG0780041663.01 | MsG0880042495.01 | 0.801181 | 1.016455e-48 | 4.822837e-46 |
| MsG0780041663.01 | MsG0880042588.01 | -0.812998 | 3.196523e-51 | 2.062691e-48 |
| MsG0780041663.01 | MsG0880042591.01 | 0.810742 | 9.910150e-51 | 6.022475e-48 |
| MsG0780041663.01 | MsG0880042694.01 | 0.830856 | 2.319844e-55 | 2.474443e-52 |
| MsG0780041663.01 | MsG0880042740.01 | 0.830774 | 2.429505e-55 | 2.585153e-52 |
| MsG0780041663.01 | MsG0880042858.01 | -0.845772 | 3.296851e-59 | 5.554209e-56 |
| MsG0780041663.01 | MsG0880043069.01 | -0.811671 | 6.230745e-51 | 3.880360e-48 |
| MsG0780041663.01 | MsG0880043364.01 | 0.829346 | 5.419038e-55 | 5.532013e-52 |
| MsG0780041663.01 | MsG0880043472.01 | 0.852563 | 4.252892e-61 | 8.921989e-58 |
| MsG0780041663.01 | MsG0880043828.01 | 0.840412 | 8.830377e-58 | 1.256895e-54 |
| MsG0780041663.01 | MsG0880043906.01 | 0.812277 | 4.598162e-51 | 2.911065e-48 |
| MsG0780041663.01 | MsG0880044339.01 | -0.833010 | 6.817178e-56 | 7.751201e-53 |
| MsG0780041663.01 | MsG0880044387.01 | -0.816502 | 5.350070e-52 | 3.797402e-49 |
| MsG0780041663.01 | MsG0880044570.01 | 0.810082 | 1.375325e-50 | 8.213113e-48 |
| MsG0780041663.01 | MsG0880044968.01 | -0.807846 | 4.140570e-50 | 2.330778e-47 |
| MsG0780041663.01 | MsG0880045063.01 | -0.848189 | 7.182581e-60 | 1.307375e-56 |
| MsG0780041663.01 | MsG0880045148.01 | 0.830205 | 3.347982e-55 | 3.503907e-52 |
| MsG0780041663.01 | MsG0880045188.01 | -0.802370 | 5.794568e-49 | 2.833677e-46 |
| MsG0780041663.01 | MsG0880045274.01 | -0.806843 | 6.754796e-50 | 3.704749e-47 |
| MsG0780041663.01 | MsG0880045321.01 | -0.808620 | 2.832286e-50 | 1.627023e-47 |
| MsG0780041663.01 | MsG0880045369.01 | -0.842718 | 2.179432e-58 | 3.333140e-55 |
| MsG0780041663.01 | MsG0880045374.01 | -0.812762 | 3.602045e-51 | 2.309787e-48 |
| MsG0780041663.01 | MsG0880045385.01 | -0.840504 | 8.358181e-58 | 1.193034e-54 |
| MsG0780041663.01 | MsG0880045413.01 | -0.822744 | 2.010781e-53 | 1.697841e-50 |
| MsG0780041663.01 | MsG0880045414.01 | -0.812418 | 4.282939e-51 | 2.721838e-48 |
| MsG0780041663.01 | MsG0880045458.01 | 0.834302 | 3.241617e-56 | 3.831433e-53 |
| MsG0780041663.01 | MsG0880045677.01 | 0.824453 | 8.005249e-54 | 7.093387e-51 |
| MsG0780041663.01 | MsG0880045683.01 | 0.847698 | 9.810983e-60 | 1.758481e-56 |
| MsG0780041663.01 | MsG0880045703.01 | -0.813598 | 2.360551e-51 | 1.548280e-48 |
| MsG0780041663.01 | MsG0880045778.01 | -0.823457 | 1.371090e-53 | 1.181135e-50 |
| MsG0780041663.01 | MsG0880045968.01 | -0.841409 | 4.835501e-58 | 7.099186e-55 |
| MsG0780041663.01 | MsG0880046010.01 | -0.839165 | 1.865460e-57 | 2.554489e-54 |
| MsG0780041663.01 | MsG0880046040.01 | -0.804875 | 1.751110e-49 | 9.132071e-47 |
| MsG0780041663.01 | MsG0880046092.01 | 0.809163 | 2.167651e-50 | 1.263407e-47 |
| MsG0780041663.01 | MsG0880046151.01 | -0.821930 | 3.106417e-53 | 2.562671e-50 |
| MsG0780041663.01 | MsG0880046167.01 | -0.802528 | 5.374279e-49 | 2.638578e-46 |
| MsG0780041663.01 | MsG0880046174.01 | -0.812109 | 5.001390e-51 | 3.151799e-48 |
| MsG0780041663.01 | MsG0880046176.01 | 0.804342 | 2.262142e-49 | 1.163484e-46 |
| MsG0780041663.01 | MsG0880046189.01 | -0.802544 | 5.335859e-49 | 2.620784e-46 |
| MsG0780041663.01 | MsG0880046219.01 | -0.844381 | 7.829105e-59 | 1.261607e-55 |
| MsG0780041663.01 | MsG0880046308.01 | 0.806018 | 1.008600e-49 | 5.416178e-47 |
| MsG0780041663.01 | MsG0880046341.01 | -0.849689 | 2.751884e-60 | 5.259875e-57 |
| MsG0780041663.01 | MsG0880046390.01 | 0.810772 | 9.762039e-51 | 5.937270e-48 |
| MsG0780041663.01 | MsG0880046429.01 | 0.821840 | 3.258991e-53 | 2.681779e-50 |
| MsG0780041663.01 | MsG0880046469.01 | -0.836323 | 1.000678e-56 | 1.256900e-53 |
| MsG0780041663.01 | MsG0880046822.01 | 0.800124 | 1.669543e-48 | 7.712142e-46 |
| MsG0780041663.01 | MsG0880046863.01 | 0.857783 | 1.289652e-62 | 3.219667e-59 |
| MsG0780041663.01 | MsG0880046876.01 | -0.844943 | 5.527541e-59 | 9.066960e-56 |
| MsG0780041663.01 | MsG0880047318.01 | -0.832768 | 7.828962e-56 | 8.837085e-53 |
| MsG0780041663.01 | MsG0880047493.01 | 0.812537 | 4.033443e-51 | 2.571346e-48 |
| MsG0780041663.01 | MsG0880047627.01 | -0.821191 | 4.603302e-53 | 3.719625e-50 |
| MsG0780041663.01 | MsG0880047628.01 | -0.805009 | 1.641413e-49 | 8.588707e-47 |
| MsG0780041663.01 | MsG0880047661.01 | -0.808721 | 2.694443e-50 | 1.551945e-47 |
| MsG0280010583.01 | MsG0780041663.01 | -0.819668 | 1.028967e-52 | 7.969280e-50 |
| MsG0280010606.01 | MsG0780041663.01 | -0.817508 | 3.179233e-52 | 2.319825e-49 |
| MsG0280010704.01 | MsG0780041663.01 | -0.804205 | 2.415773e-49 | 1.238097e-46 |
| MsG0280011165.01 | MsG0780041663.01 | 0.847708 | 9.749049e-60 | 1.747868e-56 |
| MsG0280011193.01 | MsG0780041663.01 | 0.844663 | 6.576964e-59 | 1.069305e-55 |
| MsG0280011203.01 | MsG0780041663.01 | 0.846373 | 2.262157e-59 | 3.885410e-56 |
| MsG0280011281.01 | MsG0780041663.01 | -0.849743 | 2.658152e-60 | 5.089332e-57 |
| MsG0280011299.01 | MsG0780041663.01 | -0.823381 | 1.428006e-53 | 1.227466e-50 |
| MsG0280011301.01 | MsG0780041663.01 | -0.833666 | 4.677886e-56 | 5.423897e-53 |
| MsG0280011475.01 | MsG0780041663.01 | -0.838078 | 3.560533e-57 | 4.716579e-54 |
| MsG0380012065.01 | MsG0780041663.01 | -0.803337 | 3.657954e-49 | 1.833388e-46 |
| MsG0380012148.01 | MsG0780041663.01 | -0.857154 | 1.980618e-62 | 4.842368e-59 |
| MsG0380012157.01 | MsG0780041663.01 | -0.813885 | 2.040698e-51 | 1.348912e-48 |
| MsG0380012281.01 | MsG0780041663.01 | -0.822180 | 2.719353e-53 | 2.259238e-50 |
| MsG0380013114.01 | MsG0780041663.01 | -0.859505 | 3.948561e-63 | 1.045174e-59 |
| MsG0380013272.01 | MsG0780041663.01 | 0.845772 | 3.296851e-59 | 5.554209e-56 |
| MsG0380013300.01 | MsG0780041663.01 | 0.847009 | 1.516495e-59 | 2.658401e-56 |
| MsG0380013473.01 | MsG0780041663.01 | -0.806113 | 9.630977e-50 | 5.184259e-47 |
| MsG0380013506.01 | MsG0780041663.01 | -0.847500 | 1.111982e-59 | 1.980393e-56 |
| MsG0380014231.01 | MsG0780041663.01 | -0.820734 | 5.865483e-53 | 4.679152e-50 |
| MsG0380014410.01 | MsG0780041663.01 | 0.807555 | 4.772623e-50 | 2.666343e-47 |
| MsG0380014639.01 | MsG0780041663.01 | -0.856824 | 2.476978e-62 | 5.986732e-59 |
| MsG0380014642.01 | MsG0780041663.01 | -0.850618 | 1.511635e-60 | 2.978458e-57 |
| MsG0380014735.01 | MsG0780041663.01 | -0.832994 | 6.877882e-56 | 7.816758e-53 |
| MsG0380014802.01 | MsG0780041663.01 | 0.809883 | 1.518042e-50 | 9.018509e-48 |
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| MsG0280009526.01 | MsG0780041663.01 | 0.805546 | 1.266958e-49 | 6.721342e-47 |
| MsG0280009579.01 | MsG0780041663.01 | -0.819579 | 1.078485e-52 | 8.332237e-50 |
| MsG0280009742.01 | MsG0780041663.01 | -0.839766 | 1.302334e-57 | 1.816530e-54 |
| MsG0280009776.01 | MsG0780041663.01 | -0.802191 | 6.307231e-49 | 3.070088e-46 |
| MsG0280009864.01 | MsG0780041663.01 | -0.812558 | 3.991974e-51 | 2.546190e-48 |
| MsG0280010019.01 | MsG0780041663.01 | 0.812237 | 4.689727e-51 | 2.965839e-48 |
| MsG0280010047.01 | MsG0780041663.01 | 0.808669 | 2.763930e-50 | 1.589874e-47 |
| MsG0280010053.01 | MsG0780041663.01 | 0.812015 | 5.243695e-51 | 3.296046e-48 |
| MsG0280010055.01 | MsG0780041663.01 | 0.803192 | 3.920781e-49 | 1.957872e-46 |
| MsG0280010149.01 | MsG0780041663.01 | -0.852979 | 3.235183e-61 | 6.882612e-58 |
| MsG0280010240.01 | MsG0780041663.01 | 0.816747 | 4.716208e-52 | 3.370134e-49 |
| MsG0280010356.01 | MsG0780041663.01 | -0.823491 | 1.346242e-53 | 1.160921e-50 |
| MsG0280010521.01 | MsG0780041663.01 | 0.804010 | 2.652588e-49 | 1.352735e-46 |
| MsG0680035841.01 | MsG0780041663.01 | 0.802240 | 6.162744e-49 | 3.003607e-46 |
| MsG0780035993.01 | MsG0780041663.01 | 0.822045 | 2.922194e-53 | 2.418454e-50 |
| MsG0780035994.01 | MsG0780041663.01 | -0.869343 | 3.325400e-66 | 1.243816e-62 |
| MsG0780036067.01 | MsG0780041663.01 | -0.822589 | 2.184802e-53 | 1.836771e-50 |
| MsG0780036421.01 | MsG0780041663.01 | 0.805573 | 1.250688e-49 | 6.639620e-47 |
| MsG0780036661.01 | MsG0780041663.01 | 0.879620 | 1.074083e-69 | 5.863386e-66 |
| MsG0780036909.01 | MsG0780041663.01 | -0.812390 | 4.342881e-51 | 2.757849e-48 |
| MsG0780037182.01 | MsG0780041663.01 | 0.807667 | 4.520481e-50 | 2.532787e-47 |
| MsG0780037458.01 | MsG0780041663.01 | -0.810073 | 1.381960e-50 | 8.250870e-48 |
| MsG0780037698.01 | MsG0780041663.01 | -0.824486 | 7.865877e-54 | 6.976711e-51 |
| MsG0780037734.01 | MsG0780041663.01 | -0.826321 | 2.892740e-54 | 2.703768e-51 |
| MsG0780038047.01 | MsG0780041663.01 | -0.832062 | 1.171001e-55 | 1.294430e-52 |
| MsG0780038431.01 | MsG0780041663.01 | 0.826306 | 2.916808e-54 | 2.725114e-51 |
| MsG0780038755.01 | MsG0780041663.01 | 0.850380 | 1.762576e-60 | 3.445983e-57 |
| MsG0780038756.01 | MsG0780041663.01 | -0.802761 | 4.811692e-49 | 2.376558e-46 |
| MsG0780038922.01 | MsG0780041663.01 | 0.831630 | 1.497384e-55 | 1.634211e-52 |
| MsG0780039287.01 | MsG0780041663.01 | -0.846422 | 2.193465e-59 | 3.773652e-56 |
| MsG0780039431.01 | MsG0780041663.01 | 0.812301 | 4.542332e-51 | 2.877520e-48 |
| MsG0780039576.01 | MsG0780041663.01 | 0.819499 | 1.124967e-52 | 8.671888e-50 |
| MsG0780039593.01 | MsG0780041663.01 | 0.801105 | 1.053248e-48 | 4.988159e-46 |
| MsG0780039783.01 | MsG0780041663.01 | 0.821249 | 4.464107e-53 | 3.612626e-50 |
| MsG0780039821.01 | MsG0780041663.01 | -0.832944 | 7.077660e-56 | 8.031200e-53 |
| MsG0780039836.01 | MsG0780041663.01 | -0.830620 | 2.650555e-55 | 2.807460e-52 |
| MsG0780039838.01 | MsG0780041663.01 | -0.848261 | 6.861932e-60 | 1.251994e-56 |
| MsG0780039839.01 | MsG0780041663.01 | -0.861064 | 1.333447e-63 | 3.724457e-60 |
| MsG0780039879.01 | MsG0780041663.01 | -0.801528 | 8.627634e-49 | 4.129648e-46 |
| MsG0780039978.01 | MsG0780041663.01 | 0.863760 | 1.977050e-64 | 6.062812e-61 |
| MsG0780040072.01 | MsG0780041663.01 | -0.825236 | 5.231415e-54 | 4.741112e-51 |
| MsG0780040121.01 | MsG0780041663.01 | -0.821229 | 4.511894e-53 | 3.649457e-50 |
| MsG0780040158.01 | MsG0780041663.01 | -0.815509 | 8.916345e-52 | 6.159550e-49 |
| MsG0780040159.01 | MsG0780041663.01 | -0.803437 | 3.487643e-49 | 1.752575e-46 |
| MsG0780040167.01 | MsG0780041663.01 | -0.800234 | 1.586022e-48 | 7.346669e-46 |
| MsG0780040181.01 | MsG0780041663.01 | 0.818315 | 2.090271e-52 | 1.559326e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041663.01.T01 | MTR_7g115460 | 90.574 | 244 | 8 | 1 | 26 | 269 | 321 | 549 | 1.89e-158 | 452 |
| MsG0780041663.01.T01 | MTR_1g080460 | 66.667 | 246 | 66 | 2 | 25 | 269 | 311 | 541 | 1.77e-107 | 322 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041663.01.T01 | AT5G18480 | 52.653 | 245 | 92 | 4 | 26 | 269 | 316 | 537 | 4.84e-67 | 217 |
Find 77 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAATGTTTATTGTATTATT+TGG | 0.112274 | 7:-93655794 | MsG0780041663.01.T01:CDS |
| CTCGTCACTTCCTGAGTCTT+TGG | 0.182248 | 7:-93655714 | MsG0780041663.01.T01:CDS |
| GAGTCTTTGGATTATGATTC+TGG | 0.187029 | 7:-93655701 | MsG0780041663.01.T01:CDS |
| GTGCAAGGTTCCTACCTATT+TGG | 0.237507 | 7:-93655939 | MsG0780041663.01.T01:CDS |
| TTCTGTCTGTTTCTGTTTAA+CGG | 0.247943 | 7:-93655909 | MsG0780041663.01.T01:CDS |
| GTTATCTTCATTTGGTTTAT+CGG | 0.283666 | 7:-93655769 | MsG0780041663.01.T01:CDS |
| ATGAAACACAGGCTCCTATT+TGG | 0.301950 | 7:+93654700 | None:intergenic |
| ATTTGGAGGTTATCTTCATT+TGG | 0.317707 | 7:-93655777 | MsG0780041663.01.T01:CDS |
| GCTATCCGGTCATTCCTAAA+AGG | 0.323926 | 7:-93654745 | MsG0780041663.01.T01:CDS |
| GCTACATGGTACTATGGATT+AGG | 0.324256 | 7:-93655532 | MsG0780041663.01.T01:CDS |
| TGCAAGGTTCCTACCTATTT+GGG | 0.337684 | 7:-93655938 | MsG0780041663.01.T01:CDS |
| TTGATCTAATCTTATAATAA+AGG | 0.339906 | 7:+93656352 | None:intergenic |
| GGTTAGGTTTGATGGTTGTC+GGG | 0.371768 | 7:-93654813 | MsG0780041663.01.T01:CDS |
| CAGTCCACGGCATCACTTGC+CGG | 0.376274 | 7:+93655846 | None:intergenic |
| ACGGCTGCTGTGGTGTCTCT+TGG | 0.387385 | 7:-93655890 | MsG0780041663.01.T01:CDS |
| AGGTTAGGTTTGATGGTTGT+CGG | 0.394243 | 7:-93654814 | MsG0780041663.01.T01:CDS |
| TAGAACAACAATACAAATCT+AGG | 0.397919 | 7:+93654605 | None:intergenic |
| CTAGTTGAAGATGTAAATAA+AGG | 0.402579 | 7:-93654585 | MsG0780041663.01.T01:three_prime_UTR |
| GACAGAAATACCGCCCAAAT+AGG | 0.402864 | 7:+93655925 | None:intergenic |
| ATGTATCATTGTATTTGCTT+AGG | 0.416458 | 7:-93654551 | MsG0780041663.01.T01:three_prime_UTR |
| CTACATGGTACTATGGATTA+GGG | 0.418213 | 7:-93655531 | MsG0780041663.01.T01:CDS |
| TGGATTAGGGATGGCCTTGT+TGG | 0.421428 | 7:-93655518 | MsG0780041663.01.T01:CDS |
| TTATTCTTTCAAAATCTAGT+TGG | 0.442653 | 7:-93654506 | MsG0780041663.01.T01:three_prime_UTR |
| AGTCCACGGCATCACTTGCC+GGG | 0.455569 | 7:+93655847 | None:intergenic |
| AGTGGGATATTGCTCCAAAT+AGG | 0.456014 | 7:-93654714 | MsG0780041663.01.T01:CDS |
| GATGCTGCTACATGGTACTA+TGG | 0.457667 | 7:-93655538 | MsG0780041663.01.T01:CDS |
| CGGCAAGTGATGCCGTGGAC+TGG | 0.461514 | 7:-93655845 | MsG0780041663.01.T01:CDS |
| TCTTCATTTGGTTTATCGGT+GGG | 0.463764 | 7:-93655765 | MsG0780041663.01.T01:CDS |
| GATGTTGAGATAGTTGTATA+AGG | 0.472611 | 7:+93656318 | None:intergenic |
| ATGTTTATTGTATTATTTGG+AGG | 0.476336 | 7:-93655791 | MsG0780041663.01.T01:CDS |
| CATATTAAGATTTGTTTCGA+TGG | 0.477072 | 7:-93655989 | MsG0780041663.01.T01:intron |
| ATGTGCTTAATGCTTGAGAT+TGG | 0.479434 | 7:+93656471 | None:intergenic |
| CTTCTGAACATCTTGCTATC+CGG | 0.479536 | 7:-93654759 | MsG0780041663.01.T01:CDS |
| ATCTTCATTTGGTTTATCGG+TGG | 0.485026 | 7:-93655766 | MsG0780041663.01.T01:CDS |
| AGGAATCAATTCAATCCATC+AGG | 0.487708 | 7:-93656295 | MsG0780041663.01.T01:CDS |
| GGGATGGCCTTGTTGGCCAT+TGG | 0.489010 | 7:-93655511 | MsG0780041663.01.T01:CDS |
| ATAATAAGCGGTGATGTAAA+CGG | 0.494535 | 7:-93654662 | MsG0780041663.01.T01:three_prime_UTR |
| CAAATGACAGTAGAACTAAC+TGG | 0.501079 | 7:+93654429 | None:intergenic |
| TTGCAGAATCGAGAGTACTT+TGG | 0.502931 | 7:-93656414 | MsG0780041663.01.T01:CDS |
| GAGATAGTTGTATAAGGAAG+TGG | 0.503037 | 7:+93656324 | None:intergenic |
| AGGCACAATTCTGTCGGGTA+AGG | 0.509918 | 7:+93654483 | None:intergenic |
| GCTCCCTATGTGATCAAGTC+AGG | 0.510268 | 7:-93656377 | MsG0780041663.01.T01:CDS |
| TATACAACTATCTCAACATC+AGG | 0.514583 | 7:-93656315 | MsG0780041663.01.T01:CDS |
| ATAGGGCTTCGAATAAGTCT+TGG | 0.521842 | 7:-93656450 | MsG0780041663.01.T01:CDS |
| TATTATAAGATTAGATCAAG+TGG | 0.524639 | 7:-93656348 | MsG0780041663.01.T01:CDS |
| CTTCATTTGGTTTATCGGTG+GGG | 0.530069 | 7:-93655764 | MsG0780041663.01.T01:CDS |
| TGCATAGGCACAATTCTGTC+GGG | 0.532097 | 7:+93654478 | None:intergenic |
| ATCAATTCAATCCATCAGGT+TGG | 0.543189 | 7:-93656291 | MsG0780041663.01.T01:CDS |
| GTGCATAGGCACAATTCTGT+CGG | 0.543367 | 7:+93654477 | None:intergenic |
| CTCGAATGGTTCTCAGTGCA+AGG | 0.544103 | 7:-93655954 | MsG0780041663.01.T01:CDS |
| GTGCCTGACTTGATCACATA+GGG | 0.545198 | 7:+93656374 | None:intergenic |
| TTCCCCGGCAAGTGATGCCG+TGG | 0.546088 | 7:-93655850 | MsG0780041663.01.T01:CDS |
| GTTAGGTTTGATGGTTGTCG+GGG | 0.547123 | 7:-93654812 | MsG0780041663.01.T01:CDS |
| TAGCTCTCTTGATTGTTCCC+CGG | 0.552382 | 7:-93655865 | MsG0780041663.01.T01:CDS |
| TCTCAAGCATTAAGCACATA+GGG | 0.553144 | 7:-93656467 | MsG0780041663.01.T01:CDS |
| TGGAGCACCAATGGCCAACA+AGG | 0.554201 | 7:+93655504 | None:intergenic |
| AGGCAAAGATGGAGCACCAA+TGG | 0.558429 | 7:+93655495 | None:intergenic |
| GACTGAGAAAACCAACCTGA+TGG | 0.564139 | 7:+93656280 | None:intergenic |
| GAATCATAATCCAAAGACTC+AGG | 0.570217 | 7:+93655704 | None:intergenic |
| ATCTCAAGCATTAAGCACAT+AGG | 0.578988 | 7:-93656468 | MsG0780041663.01.T01:CDS |
| GGTGTCAAGCAGCTCTCGAA+TGG | 0.582811 | 7:-93655968 | MsG0780041663.01.T01:CDS |
| CATCATGTGATGCTGCTACA+TGG | 0.586772 | 7:-93655546 | MsG0780041663.01.T01:CDS |
| GAAATACCGCCCAAATAGGT+AGG | 0.586979 | 7:+93655929 | None:intergenic |
| TCCTAAAAGGACTTGATGAG+TGG | 0.590262 | 7:-93654732 | MsG0780041663.01.T01:CDS |
| GAGAATCTGAAAATGTGCAT+AGG | 0.598459 | 7:+93654463 | None:intergenic |
| CCTAAAAGGACTTGATGAGT+GGG | 0.598813 | 7:-93654731 | MsG0780041663.01.T01:CDS |
| ATCAAAAGCAAACCAGTCCA+CGG | 0.610095 | 7:+93655833 | None:intergenic |
| TTTCTGTTTAACGGCTGCTG+TGG | 0.614224 | 7:-93655900 | MsG0780041663.01.T01:CDS |
| AAAATCAACATATGAAACAC+AGG | 0.615989 | 7:+93654689 | None:intergenic |
| GGTGCCTGACTTGATCACAT+AGG | 0.616621 | 7:+93656373 | None:intergenic |
| ATGGTACTATGGATTAGGGA+TGG | 0.639457 | 7:-93655527 | MsG0780041663.01.T01:CDS |
| AAGGTTCCTACCTATTTGGG+CGG | 0.652522 | 7:-93655935 | MsG0780041663.01.T01:CDS |
| TTAGGTTTGATGGTTGTCGG+GGG | 0.659292 | 7:-93654811 | MsG0780041663.01.T01:CDS |
| TTATCGGTGGGGAAAACATG+TGG | 0.662735 | 7:-93655753 | MsG0780041663.01.T01:CDS |
| GTCCACGGCATCACTTGCCG+GGG | 0.666206 | 7:+93655848 | None:intergenic |
| CAAAGACTCAGGAAGTGACG+AGG | 0.676512 | 7:+93655715 | None:intergenic |
| ATAAGCGGTGATGTAAACGG+TGG | 0.756884 | 7:-93654659 | MsG0780041663.01.T01:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTAAAATTACAAAAATAAA+TGG | + | Chr7:93656091-93656110 | None:intergenic | 10.0% |
| !!! | TTTATTTTTGTAATTTTAAC+AGG | - | Chr7:93656091-93656110 | MsG0780041663.01.T01:intron | 10.0% |
| !! | ACAATGTTTATTGTATTATT+TGG | - | Chr7:93655131-93655150 | MsG0780041663.01.T01:intron | 15.0% |
| !! | TATATCGAAATTATAAAAGT+TGG | + | Chr7:93655727-93655746 | None:intergenic | 15.0% |
| !! | TTAATTTATACTGTATTTAC+AGG | - | Chr7:93655339-93655358 | MsG0780041663.01.T01:intron | 15.0% |
| !! | TTGATCTAATCTTATAATAA+AGG | + | Chr7:93654576-93654595 | None:intergenic | 15.0% |
| !!! | TTGATTTTTGTAATAATAAG+CGG | - | Chr7:93656251-93656270 | MsG0780041663.01.T01:intron | 15.0% |
| !! | ATGTTTATTGTATTATTTGG+AGG | - | Chr7:93655134-93655153 | MsG0780041663.01.T01:intron | 20.0% |
| !! | TATTATAAGATTAGATCAAG+TGG | - | Chr7:93654577-93654596 | MsG0780041663.01.T01:three_prime_UTR | 20.0% |
| !! | TTATTCTTTCAAAATCTAGT+TGG | - | Chr7:93656419-93656438 | MsG0780041663.01.T01:CDS | 20.0% |
| !!! | AAAATTTTCACCCTAAAAAA+AGG | + | Chr7:93655566-93655585 | None:intergenic | 20.0% |
| !!! | AATACTTCAAACCTTTTTTT+AGG | - | Chr7:93655552-93655571 | MsG0780041663.01.T01:CDS | 20.0% |
| !!! | ATACTTCAAACCTTTTTTTA+GGG | - | Chr7:93655553-93655572 | MsG0780041663.01.T01:CDS | 20.0% |
| !!! | CGATATATTACAGTTAATTT+TGG | - | Chr7:93655740-93655759 | MsG0780041663.01.T01:CDS | 20.0% |
| !!! | TATATTACAGTTAATTTTGG+TGG | - | Chr7:93655743-93655762 | MsG0780041663.01.T01:CDS | 20.0% |
| !!! | TTGTACTTTTTAATAAGTTG+TGG | - | Chr7:93655826-93655845 | MsG0780041663.01.T01:CDS | 20.0% |
| !!! | TTTTGTAATTTTAACAGGTT+AGG | - | Chr7:93656096-93656115 | MsG0780041663.01.T01:intron | 20.0% |
| ! | AAAATCAACATATGAAACAC+AGG | + | Chr7:93656239-93656258 | None:intergenic | 25.0% |
| ! | ATGTATCATTGTATTTGCTT+AGG | - | Chr7:93656374-93656393 | MsG0780041663.01.T01:CDS | 25.0% |
| ! | CTAGTTGAAGATGTAAATAA+AGG | - | Chr7:93656340-93656359 | MsG0780041663.01.T01:CDS | 25.0% |
| ! | TAGAACAACAATACAAATCT+AGG | + | Chr7:93656323-93656342 | None:intergenic | 25.0% |
| ! | TTGTGATTCAACATTTAAAG+AGG | - | Chr7:93655673-93655692 | MsG0780041663.01.T01:intron | 25.0% |
| !! | CATATTAAGATTTGTTTCGA+TGG | - | Chr7:93654936-93654955 | MsG0780041663.01.T01:intron | 25.0% |
| !! | GTTATCTTCATTTGGTTTAT+CGG | - | Chr7:93655156-93655175 | MsG0780041663.01.T01:intron | 25.0% |
| AAAACAGTACATGTGTATAG+AGG | + | Chr7:93655769-93655788 | None:intergenic | 30.0% | |
| AATTCGCGTTCTAATGTATT+AGG | - | Chr7:93655487-93655506 | MsG0780041663.01.T01:CDS | 30.0% | |
| ATAATAAGCGGTGATGTAAA+CGG | - | Chr7:93656263-93656282 | MsG0780041663.01.T01:intron | 30.0% | |
| ATACTGAGAATTGAGAGAAA+AGG | + | Chr7:93655973-93655992 | None:intergenic | 30.0% | |
| ATGTCATGGATTCAAATAAC+AGG | - | Chr7:93654865-93654884 | MsG0780041663.01.T01:intron | 30.0% | |
| ATTTGGAGGTTATCTTCATT+TGG | - | Chr7:93655148-93655167 | MsG0780041663.01.T01:intron | 30.0% | |
| CTTTCACATTACATCTCTTA+GGG | + | Chr7:93655896-93655915 | None:intergenic | 30.0% | |
| GATGTTGAGATAGTTGTATA+AGG | + | Chr7:93654610-93654629 | None:intergenic | 30.0% | |
| TACTGAGAATTGAGAGAAAA+GGG | + | Chr7:93655972-93655991 | None:intergenic | 30.0% | |
| TATACAACTATCTCAACATC+AGG | - | Chr7:93654610-93654629 | MsG0780041663.01.T01:three_prime_UTR | 30.0% | |
| TCTACCTCATCAAAATCAAA+TGG | + | Chr7:93654721-93654740 | None:intergenic | 30.0% | |
| ! | CTATACACATGTACTGTTTT+CGG | - | Chr7:93655769-93655788 | MsG0780041663.01.T01:CDS | 30.0% |
| ! | TTTTAACAGGTTAGGTTTGA+TGG | - | Chr7:93656104-93656123 | MsG0780041663.01.T01:intron | 30.0% |
| !! | GTTTGCTTTTGATGTATGAA+TGG | - | Chr7:93655102-93655121 | MsG0780041663.01.T01:intron | 30.0% |
| !! | TACTTTGGTTCATTTTGTAG+AGG | - | Chr7:93654526-93654545 | MsG0780041663.01.T01:three_prime_UTR | 30.0% |
| !! | TTCTGTCTGTTTCTGTTTAA+CGG | - | Chr7:93655016-93655035 | MsG0780041663.01.T01:intron | 30.0% |
| !!! | CAAGAGTAAAGCTTATTTTG+TGG | - | Chr7:93655261-93655280 | MsG0780041663.01.T01:intron | 30.0% |
| !!! | GAATAACTGCCTTGTTTTTA+AGG | - | Chr7:93655463-93655482 | MsG0780041663.01.T01:CDS | 30.0% |
| ACTACTATCATCAAATGACC+TGG | - | Chr7:93654831-93654850 | MsG0780041663.01.T01:intron | 35.0% | |
| AGAATTGAGAGAAAAGGGAA+AGG | + | Chr7:93655967-93655986 | None:intergenic | 35.0% | |
| AGGAATCAATTCAATCCATC+AGG | - | Chr7:93654630-93654649 | MsG0780041663.01.T01:three_prime_UTR | 35.0% | |
| AGGCTAAAAATCAGTTTGAG+TGG | - | Chr7:93655936-93655955 | MsG0780041663.01.T01:CDS | 35.0% | |
| ATCAATTCAATCCATCAGGT+TGG | - | Chr7:93654634-93654653 | MsG0780041663.01.T01:three_prime_UTR | 35.0% | |
| ATCTCAAGCATTAAGCACAT+AGG | - | Chr7:93654457-93654476 | MsG0780041663.01.T01:three_prime_UTR | 35.0% | |
| ATGTGCTTAATGCTTGAGAT+TGG | + | Chr7:93654457-93654476 | None:intergenic | 35.0% | |
| CAAATGGCTAGATCATATGA+AGG | + | Chr7:93654705-93654724 | None:intergenic | 35.0% | |
| CCTAAGAGATGTAATGTGAA+AGG | - | Chr7:93655894-93655913 | MsG0780041663.01.T01:CDS | 35.0% | |
| CCTTTCACATTACATCTCTT+AGG | + | Chr7:93655897-93655916 | None:intergenic | 35.0% | |
| CGCGAATTACCTTAAAAACA+AGG | + | Chr7:93655475-93655494 | None:intergenic | 35.0% | |
| GAATCATAATCCAAAGACTC+AGG | + | Chr7:93655224-93655243 | None:intergenic | 35.0% | |
| GAGAATCTGAAAATGTGCAT+AGG | + | Chr7:93656465-93656484 | None:intergenic | 35.0% | |
| GAGATAGTTGTATAAGGAAG+TGG | + | Chr7:93654604-93654623 | None:intergenic | 35.0% | |
| GAGTCTTTGGATTATGATTC+TGG | - | Chr7:93655224-93655243 | MsG0780041663.01.T01:intron | 35.0% | |
| GATTTGGATCATCTCATTTG+AGG | - | Chr7:93654679-93654698 | MsG0780041663.01.T01:exon | 35.0% | |
| GCAGTTATTCCAAAAAGACA+AGG | + | Chr7:93655453-93655472 | None:intergenic | 35.0% | |
| TCTCAAGCATTAAGCACATA+GGG | - | Chr7:93654458-93654477 | MsG0780041663.01.T01:three_prime_UTR | 35.0% | |
| TCTTAGGGAATTCAAATGAG+TGG | + | Chr7:93655881-93655900 | None:intergenic | 35.0% | |
| ! | ATCTTCATTTGGTTTATCGG+TGG | - | Chr7:93655159-93655178 | MsG0780041663.01.T01:intron | 35.0% |
| ! | CTACATGGTACTATGGATTA+GGG | - | Chr7:93655394-93655413 | MsG0780041663.01.T01:intron | 35.0% |
| ! | CTTTGCATCAGAGATTTGTT+TGG | - | Chr7:93656053-93656072 | MsG0780041663.01.T01:intron | 35.0% |
| ! | GATGATCCAAATCTAAAACC+AGG | + | Chr7:93654672-93654691 | None:intergenic | 35.0% |
| ! | TAGGGTGAAAATTTTATCCG+TGG | - | Chr7:93655571-93655590 | MsG0780041663.01.T01:intron | 35.0% |
| ! | TCTTCATTTGGTTTATCGGT+GGG | - | Chr7:93655160-93655179 | MsG0780041663.01.T01:intron | 35.0% |
| !! | CTAGCCATTTGATTTTGATG+AGG | - | Chr7:93654714-93654733 | MsG0780041663.01.T01:CDS | 35.0% |
| !! | GTTTTAAGCTTGCATTGGAA+AGG | - | Chr7:93655916-93655935 | MsG0780041663.01.T01:CDS | 35.0% |
| !!! | GAAAGGTTTTAAGCTTGCAT+TGG | - | Chr7:93655911-93655930 | MsG0780041663.01.T01:CDS | 35.0% |
| AAGTATGCAAGTCCAACTAG+AGG | + | Chr7:93654899-93654918 | None:intergenic | 40.0% | |
| AGTGGGATATTGCTCCAAAT+AGG | - | Chr7:93656211-93656230 | MsG0780041663.01.T01:intron | 40.0% | |
| ATAGGGCTTCGAATAAGTCT+TGG | - | Chr7:93654475-93654494 | MsG0780041663.01.T01:three_prime_UTR | 40.0% | |
| ATCAAAAGCAAACCAGTCCA+CGG | + | Chr7:93655095-93655114 | None:intergenic | 40.0% | |
| ATGAAACACAGGCTCCTATT+TGG | + | Chr7:93656228-93656247 | None:intergenic | 40.0% | |
| ATGACATGACAACATTGACC+AGG | + | Chr7:93654852-93654871 | None:intergenic | 40.0% | |
| CAAACACAACGCCTTGTATA+AGG | - | Chr7:93654741-93654760 | MsG0780041663.01.T01:CDS | 40.0% | |
| CCAAAAAGACAAGGCAAAGA+TGG | + | Chr7:93655444-93655463 | None:intergenic | 40.0% | |
| CCTAAAAGGACTTGATGAGT+GGG | - | Chr7:93656194-93656213 | MsG0780041663.01.T01:intron | 40.0% | |
| CTCCCAAAATCTCTTGTACA+GGG | - | Chr7:93654765-93654784 | MsG0780041663.01.T01:CDS | 40.0% | |
| GCTACATGGTACTATGGATT+AGG | - | Chr7:93655393-93655412 | MsG0780041663.01.T01:intron | 40.0% | |
| GTCTACTCTGATGTGATTCT+AGG | + | Chr7:93656003-93656022 | None:intergenic | 40.0% | |
| TCCTAAAAGGACTTGATGAG+TGG | - | Chr7:93656193-93656212 | MsG0780041663.01.T01:intron | 40.0% | |
| TCCTGTACATGAGAAGAACA+CGG | + | Chr7:93654793-93654812 | None:intergenic | 40.0% | |
| TGCAAGGTTCCTACCTATTT+GGG | - | Chr7:93654987-93655006 | MsG0780041663.01.T01:intron | 40.0% | |
| TGGTCAATGTTGTCATGTCA+TGG | - | Chr7:93654851-93654870 | MsG0780041663.01.T01:intron | 40.0% | |
| TTTATCCGTGGTTCCAAAAG+TGG | - | Chr7:93655583-93655602 | MsG0780041663.01.T01:intron | 40.0% | |
| ! | AGGTTAGGTTTGATGGTTGT+CGG | - | Chr7:93656111-93656130 | MsG0780041663.01.T01:intron | 40.0% |
| ! | CCATCTTTGCCTTGTCTTTT+TGG | - | Chr7:93655441-93655460 | MsG0780041663.01.T01:intron | 40.0% |
| ! | CTTCATTTGGTTTATCGGTG+GGG | - | Chr7:93655161-93655180 | MsG0780041663.01.T01:intron | 40.0% |
| ! | CTTCTGAACATCTTGCTATC+CGG | - | Chr7:93656166-93656185 | MsG0780041663.01.T01:intron | 40.0% |
| ! | GACCCTGTACAAGAGATTTT+GGG | + | Chr7:93654770-93654789 | None:intergenic | 40.0% |
| !! | ATGGTACTATGGATTAGGGA+TGG | - | Chr7:93655398-93655417 | MsG0780041663.01.T01:intron | 40.0% |
| !! | ATTTTGGGAGGCCTTATACA+AGG | + | Chr7:93654755-93654774 | None:intergenic | 40.0% |
| !! | CAAGTCCTTTTAGGAATGAC+CGG | + | Chr7:93656188-93656207 | None:intergenic | 40.0% |
| !! | TTGCAGAATCGAGAGTACTT+TGG | - | Chr7:93654511-93654530 | MsG0780041663.01.T01:three_prime_UTR | 40.0% |
| !!! | CAGTCTCCTGGTTTTAGATT+TGG | - | Chr7:93654663-93654682 | MsG0780041663.01.T01:three_prime_UTR | 40.0% |
| AAGGTTCCTACCTATTTGGG+CGG | - | Chr7:93654990-93655009 | MsG0780041663.01.T01:intron | 45.0% | |
| ATAAGCGGTGATGTAAACGG+TGG | - | Chr7:93656266-93656285 | MsG0780041663.01.T01:intron | 45.0% | |
| CAGGATGCATAACCTCTAGT+TGG | - | Chr7:93654884-93654903 | MsG0780041663.01.T01:intron | 45.0% | |
| CATCATGTGATGCTGCTACA+TGG | - | Chr7:93655379-93655398 | MsG0780041663.01.T01:intron | 45.0% | |
| CCTCCCAAAATCTCTTGTAC+AGG | - | Chr7:93654764-93654783 | MsG0780041663.01.T01:CDS | 45.0% | |
| CCTGTACATGAGAAGAACAC+GGG | + | Chr7:93654792-93654811 | None:intergenic | 45.0% | |
| GAAATACCGCCCAAATAGGT+AGG | + | Chr7:93654999-93655018 | None:intergenic | 45.0% | |
| GACAGAAATACCGCCCAAAT+AGG | + | Chr7:93655003-93655022 | None:intergenic | 45.0% | |
| GACTGAGAAAACCAACCTGA+TGG | + | Chr7:93654648-93654667 | None:intergenic | 45.0% | |
| GATGCTGCTACATGGTACTA+TGG | - | Chr7:93655387-93655406 | MsG0780041663.01.T01:intron | 45.0% | |
| GCTATCCGGTCATTCCTAAA+AGG | - | Chr7:93656180-93656199 | MsG0780041663.01.T01:intron | 45.0% | |
| GTGCAAGGTTCCTACCTATT+TGG | - | Chr7:93654986-93655005 | MsG0780041663.01.T01:intron | 45.0% | |
| GTGCATAGGCACAATTCTGT+CGG | + | Chr7:93656451-93656470 | None:intergenic | 45.0% | |
| TAGCTCTCTTGATTGTTCCC+CGG | - | Chr7:93655060-93655079 | MsG0780041663.01.T01:intron | 45.0% | |
| TGCATAGGCACAATTCTGTC+GGG | + | Chr7:93656450-93656469 | None:intergenic | 45.0% | |
| TGCCAGTGCATGTCTGTTAT+CGG | - | Chr7:93655614-93655633 | MsG0780041663.01.T01:intron | 45.0% | |
| TTATCGGTGGGGAAAACATG+TGG | - | Chr7:93655172-93655191 | MsG0780041663.01.T01:intron | 45.0% | |
| TTTCTGTTTAACGGCTGCTG+TGG | - | Chr7:93655025-93655044 | MsG0780041663.01.T01:intron | 45.0% | |
| ! | CCCACTCATCAAGTCCTTTT+AGG | + | Chr7:93656197-93656216 | None:intergenic | 45.0% |
| ! | CCTGTACAAGAGATTTTGGG+AGG | + | Chr7:93654767-93654786 | None:intergenic | 45.0% |
| ! | GGACCCTGTACAAGAGATTT+TGG | + | Chr7:93654771-93654790 | None:intergenic | 45.0% |
| ! | GGTTAGGTTTGATGGTTGTC+GGG | - | Chr7:93656112-93656131 | MsG0780041663.01.T01:intron | 45.0% |
| ! | GTGCCTGACTTGATCACATA+GGG | + | Chr7:93654554-93654573 | None:intergenic | 45.0% |
| ! | GTTAGGTTTGATGGTTGTCG+GGG | - | Chr7:93656113-93656132 | MsG0780041663.01.T01:intron | 45.0% |
| ! | TTAGGTTTGATGGTTGTCGG+GGG | - | Chr7:93656114-93656133 | MsG0780041663.01.T01:intron | 45.0% |
| !! | TGGCAACAAAGAGCCACTTT+TGG | + | Chr7:93655599-93655618 | None:intergenic | 45.0% |
| !!! | AAGAGCCACTTTTGGAACCA+CGG | + | Chr7:93655591-93655610 | None:intergenic | 45.0% |
| !!! | AAAATAATAAAATTTTAACA+TGG | - | Chr7:93655700-93655719 | MsG0780041663.01.T01:CDS | 5.0% |
| AGCCGATAACAGACATGCAC+TGG | + | Chr7:93655619-93655638 | None:intergenic | 50.0% | |
| AGGCACAATTCTGTCGGGTA+AGG | + | Chr7:93656445-93656464 | None:intergenic | 50.0% | |
| CAAAGACTCAGGAAGTGACG+AGG | + | Chr7:93655213-93655232 | None:intergenic | 50.0% | |
| CCCGTGTTCTTCTCATGTAC+AGG | - | Chr7:93654789-93654808 | MsG0780041663.01.T01:CDS | 50.0% | |
| CTCGAATGGTTCTCAGTGCA+AGG | - | Chr7:93654971-93654990 | MsG0780041663.01.T01:intron | 50.0% | |
| CTCGTCACTTCCTGAGTCTT+TGG | - | Chr7:93655211-93655230 | MsG0780041663.01.T01:intron | 50.0% | |
| GCTCCCTATGTGATCAAGTC+AGG | - | Chr7:93654548-93654567 | MsG0780041663.01.T01:three_prime_UTR | 50.0% | |
| ! | AGGCAAAGATGGAGCACCAA+TGG | + | Chr7:93655433-93655452 | None:intergenic | 50.0% |
| ! | GGTGCCTGACTTGATCACAT+AGG | + | Chr7:93654555-93654574 | None:intergenic | 50.0% |
| !! | TGGATTAGGGATGGCCTTGT+TGG | - | Chr7:93655407-93655426 | MsG0780041663.01.T01:intron | 50.0% |
| !!! | GGTTGGTTTTCTCAGTCTCC+TGG | - | Chr7:93654651-93654670 | MsG0780041663.01.T01:three_prime_UTR | 50.0% |
| GGTGTCAAGCAGCTCTCGAA+TGG | - | Chr7:93654957-93654976 | MsG0780041663.01.T01:intron | 55.0% | |
| ! | TGGAGCACCAATGGCCAACA+AGG | + | Chr7:93655424-93655443 | None:intergenic | 55.0% |
| !! | GGTTGTCGGGGGCATCATAT+TGG | - | Chr7:93656125-93656144 | MsG0780041663.01.T01:intron | 55.0% |
| ACGGCTGCTGTGGTGTCTCT+TGG | - | Chr7:93655035-93655054 | MsG0780041663.01.T01:intron | 60.0% | |
| AGTCCACGGCATCACTTGCC+GGG | + | Chr7:93655081-93655100 | None:intergenic | 60.0% | |
| CAGTCCACGGCATCACTTGC+CGG | + | Chr7:93655082-93655101 | None:intergenic | 60.0% | |
| !! | GGGATGGCCTTGTTGGCCAT+TGG | - | Chr7:93655414-93655433 | MsG0780041663.01.T01:intron | 60.0% |
| CGGCAAGTGATGCCGTGGAC+TGG | - | Chr7:93655080-93655099 | MsG0780041663.01.T01:intron | 65.0% | |
| GTCCACGGCATCACTTGCCG+GGG | + | Chr7:93655080-93655099 | None:intergenic | 65.0% | |
| TTCCCCGGCAAGTGATGCCG+TGG | - | Chr7:93655075-93655094 | MsG0780041663.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 93654436 | 93656511 | 93654436 | ID=MsG0780041663.01;Name=MsG0780041663.01 |
| Chr7 | mRNA | 93654436 | 93656511 | 93654436 | ID=MsG0780041663.01.T01;Parent=MsG0780041663.01;Name=MsG0780041663.01.T01;_AED=0.45;_eAED=0.50;_QI=0|0.66|0.5|1|0.66|0.75|4|257|269 |
| Chr7 | exon | 93654436 | 93654834 | 93654436 | ID=MsG0780041663.01.T01:exon:20569;Parent=MsG0780041663.01.T01 |
| Chr7 | exon | 93655463 | 93655586 | 93655463 | ID=MsG0780041663.01.T01:exon:20568;Parent=MsG0780041663.01.T01 |
| Chr7 | exon | 93655696 | 93656002 | 93655696 | ID=MsG0780041663.01.T01:exon:20567;Parent=MsG0780041663.01.T01 |
| Chr7 | exon | 93656275 | 93656511 | 93656275 | ID=MsG0780041663.01.T01:exon:20566;Parent=MsG0780041663.01.T01 |
| Chr7 | CDS | 93656275 | 93656511 | 93656275 | ID=MsG0780041663.01.T01:cds;Parent=MsG0780041663.01.T01 |
| Chr7 | CDS | 93655696 | 93656002 | 93655696 | ID=MsG0780041663.01.T01:cds;Parent=MsG0780041663.01.T01 |
| Chr7 | CDS | 93655463 | 93655586 | 93655463 | ID=MsG0780041663.01.T01:cds;Parent=MsG0780041663.01.T01 |
| Chr7 | CDS | 93654693 | 93654834 | 93654693 | ID=MsG0780041663.01.T01:cds;Parent=MsG0780041663.01.T01 |
| Chr7 | three_prime_UTR | 93654436 | 93654692 | 93654436 | ID=MsG0780041663.01.T01:three_prime_utr;Parent=MsG0780041663.01.T01 |
| Gene Sequence |
| Protein sequence |
