AlfalfaGEDB | MsG0880045170.01

M. sativa cultivar ZhongmuNo.1 / MsG0880045170.01

KEGG: -
GO: -
PFAM: PF13639

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045170.01.T01	XP_003628792.1	96.067	356	14	0	1	356	1	356	0	701

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045170.01.T01	Q7XLY8	39.276	387	173	13	9	349	7	377	2.64E-60	201

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045170.01.T01	G7LH19	96.067	356	14	0	1	356	1	356	0.0	701

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080049016.01	MsG0880045170.01	0.825095	5.650882e-54	5.100872e-51
MsG0180000453.01	MsG0880045170.01	0.811319	7.428203e-51	4.583519e-48
MsG0180000459.01	MsG0880045170.01	0.819474	1.139363e-52	8.776989e-50
MsG0880044333.01	MsG0880045170.01	0.871830	5.066936e-67	2.072963e-63
MsG0880045150.01	MsG0880045170.01	0.834892	2.304926e-56	2.772571e-53
MsG0880045151.01	MsG0880045170.01	0.801696	7.972350e-49	3.832010e-46
MsG0880045170.01	MsG0880045772.01	0.814097	1.832798e-51	1.218434e-48
MsG0880045170.01	MsG0880046456.01	0.825078	5.702705e-54	5.145246e-51
MsG0880045170.01	MsG0880046574.01	0.825648	4.179314e-54	3.832263e-51
MsG0180003350.01	MsG0880045170.01	0.811571	6.549753e-51	4.068568e-48
MsG0180004458.01	MsG0880045170.01	0.808648	2.793042e-50	1.605708e-47
MsG0180004773.01	MsG0880045170.01	0.806614	7.551130e-50	4.116907e-47
MsG0180004865.01	MsG0880045170.01	0.822975	1.776963e-53	1.510158e-50
MsG0280006451.01	MsG0880045170.01	0.810530	1.101209e-50	6.653882e-48
MsG0880041994.01	MsG0880045170.01	0.805541	1.270079e-49	6.736965e-47
MsG0880041995.01	MsG0880045170.01	0.814757	1.309525e-51	8.862508e-49
MsG0880043156.01	MsG0880045170.01	0.816628	5.013553e-52	3.570999e-49
MsG0280011066.01	MsG0880045170.01	0.808120	3.619392e-50	2.052259e-47
MsG0280011459.01	MsG0880045170.01	0.805080	1.586313e-49	8.315661e-47
MsG0280011470.01	MsG0880045170.01	0.824032	1.005184e-53	8.800932e-51
MsG0380012125.01	MsG0880045170.01	0.816585	5.125277e-52	3.646321e-49
MsG0680031791.01	MsG0880045170.01	0.825150	5.484354e-54	4.958473e-51
MsG0480018713.01	MsG0880045170.01	0.814307	1.646675e-51	1.101064e-48
MsG0480021109.01	MsG0880045170.01	0.805404	1.356838e-49	7.172224e-47
MsG0480021563.01	MsG0880045170.01	0.839994	1.135370e-57	1.595356e-54
MsG0480021856.01	MsG0880045170.01	0.802993	4.308536e-49	2.140498e-46
MsG0480022150.01	MsG0880045170.01	0.855771	5.044990e-62	1.177741e-58
MsG0480022935.01	MsG0880045170.01	0.814287	1.663878e-51	1.111882e-48
MsG0480023300.01	MsG0880045170.01	0.820040	8.461145e-53	6.621960e-50
MsG0380017385.01	MsG0880045170.01	0.811308	7.470399e-51	4.608117e-48
MsG0580028483.01	MsG0880045170.01	0.829689	4.473549e-55	4.612526e-52
MsG0280007600.01	MsG0880045170.01	0.830546	2.763282e-55	2.920421e-52
MsG0280007755.01	MsG0880045170.01	0.813760	2.173853e-51	1.432059e-48
MsG0280010461.01	MsG0880045170.01	0.810041	1.403534e-50	8.373230e-48
MsG0280010523.01	MsG0880045170.01	0.825698	4.068189e-54	3.735716e-51
MsG0780036939.01	MsG0880045170.01	0.823031	1.723713e-53	1.467306e-50
MsG0780038115.01	MsG0880045170.01	0.813986	1.938857e-51	1.285042e-48
MsG0780038263.01	MsG0880045170.01	0.808271	3.362011e-50	1.914000e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045170.01.T01	MTR_8g066780	96.067	356	14	0	1	356	1	356	0.0	701
MsG0880045170.01.T01	MTR_5g030010	54.856	381	138	11	1	356	1	372	6.70e-124	361
MsG0880045170.01.T01	MTR_5g064890	32.258	279	154	11	1	255	4	271	2.47e-31	121
MsG0880045170.01.T01	MTR_1g070140	32.714	269	138	11	35	271	25	282	1.43e-28	114
MsG0880045170.01.T01	MTR_1g043410	35.465	172	100	4	42	208	20	185	1.49e-28	113
MsG0880045170.01.T01	MTR_4g093830	36.508	189	97	6	14	187	17	197	1.54e-25	105
MsG0880045170.01.T01	MTR_2g009310	34.496	258	146	9	110	351	131	381	2.47e-25	105
MsG0880045170.01.T01	MTR_8g089880	56.410	78	32	1	110	187	123	198	1.84e-23	98.6
MsG0880045170.01.T01	MTR_4g106680	29.524	210	111	5	37	223	6	201	1.48e-22	96.7
MsG0880045170.01.T01	MTR_3g094000	37.671	146	80	4	43	188	31	165	4.91e-22	92.0
MsG0880045170.01.T01	MTR_5g034790	33.702	181	102	4	25	193	19	193	5.05e-22	96.3
MsG0880045170.01.T01	MTR_1g074190	30.142	282	146	12	70	308	53	326	1.13e-21	94.7
MsG0880045170.01.T01	MTR_6g007737	37.589	141	79	3	56	189	68	206	1.17e-21	95.5
MsG0880045170.01.T01	MTR_6g087150	36.429	140	80	4	50	187	32	164	1.19e-21	95.1
MsG0880045170.01.T01	MTR_7g096690	35.211	142	84	3	58	191	13	154	1.36e-20	91.7
MsG0880045170.01.T01	MTR_7g113800	26.738	187	119	4	55	231	40	218	2.49e-20	91.3
MsG0880045170.01.T01	MTR_7g073200	32.386	176	99	5	41	206	13	178	7.02e-20	86.3
MsG0880045170.01.T01	MTR_8g063660	37.143	140	76	3	58	188	4	140	7.78e-20	89.4
MsG0880045170.01.T01	MTR_3g091620	40.426	141	72	3	55	185	32	170	1.39e-19	89.0
MsG0880045170.01.T01	MTR_1g082550	29.500	200	117	7	56	246	46	230	1.88e-19	89.0
MsG0880045170.01.T01	MTR_5g064990	33.333	156	87	5	37	187	45	188	2.16e-19	89.0
MsG0880045170.01.T01	MTR_3g099650	32.593	135	81	3	55	187	55	181	3.32e-19	88.2
MsG0880045170.01.T01	MTR_3g078470	31.724	145	94	3	42	185	7	147	4.82e-19	85.1
MsG0880045170.01.T01	MTR_7g116220	50.685	73	35	1	114	185	70	142	1.15e-18	83.2
MsG0880045170.01.T01	MTR_2g096350	38.281	128	68	4	96	214	90	215	1.36e-18	84.0
MsG0880045170.01.T01	MTR_7g079280	43.678	87	46	1	100	186	69	152	1.42e-18	82.8
MsG0880045170.01.T01	MTR_5g064980	35.115	131	81	4	59	187	54	182	1.47e-18	86.7
MsG0880045170.01.T01	MTR_4g022410	34.395	157	81	6	34	187	21	158	1.49e-18	82.8
MsG0880045170.01.T01	MTR_1g492830	33.333	144	86	5	58	198	8	144	2.11e-18	83.6
MsG0880045170.01.T01	MTR_3g110190	33.529	170	93	7	58	217	14	173	2.37e-18	85.5
MsG0880045170.01.T01	MTR_5g026730	29.286	140	95	1	48	187	4	139	3.90e-18	81.3
MsG0880045170.01.T01	MTR_4g129420	32.000	175	108	6	69	240	72	238	6.78e-18	85.1
MsG0880045170.01.T01	MTR_4g120270	48.649	74	34	1	114	187	80	149	1.22e-17	82.4
MsG0880045170.01.T01	MTR_5g026720	30.323	155	100	2	48	199	4	153	1.43e-17	79.3
MsG0880045170.01.T01	MTR_7g116200	37.500	136	67	3	61	185	8	136	1.65e-17	79.7
MsG0880045170.01.T01	MTR_2g090905	36.522	115	68	2	78	187	2	116	2.11e-17	78.2
MsG0880045170.01.T01	MTR_3g078450	34.783	115	73	1	71	185	35	147	2.47e-17	80.1
MsG0880045170.01.T01	MTR_3g100400	30.636	173	94	5	34	187	36	201	3.26e-17	82.8
MsG0880045170.01.T01	MTR_8g071815	33.333	138	84	2	48	185	4	133	4.87e-17	78.6
MsG0880045170.01.T01	MTR_4g063070	27.632	152	92	2	55	194	243	388	5.41e-17	82.0
MsG0880045170.01.T01	MTR_1g070425	46.053	76	40	1	114	188	68	143	8.01e-17	77.8
MsG0880045170.01.T01	MTR_5g066250	35.766	137	81	2	51	187	76	205	8.76e-17	81.6
MsG0880045170.01.T01	MTR_7g116210	48.611	72	34	1	114	185	10	78	8.90e-17	75.9
MsG0880045170.01.T01	MTR_7g116180	46.053	76	40	1	114	188	67	142	1.00e-16	77.4
MsG0880045170.01.T01	MTR_2g044570	61.818	55	20	1	136	189	76	130	1.62e-16	79.3
MsG0880045170.01.T01	MTR_5g024730	31.333	150	83	4	35	184	18	147	2.30e-16	77.4
MsG0880045170.01.T01	MTR_8g092840	37.719	114	62	3	109	214	108	220	3.36e-16	77.4
MsG0880045170.01.T01	MTR_8g009190	36.646	161	82	8	35	188	4	151	4.68e-16	78.2
MsG0880045170.01.T01	MTR_3g086700	30.366	191	106	7	59	242	1	171	5.63e-16	75.9
MsG0880045170.01.T01	MTR_1g100737	40.260	77	43	1	114	187	92	168	6.29e-16	75.9
MsG0880045170.01.T01	MTR_8g092960	37.719	114	62	3	109	214	98	210	6.94e-16	76.3
MsG0880045170.01.T01	MTR_5g082940	41.892	74	43	0	114	187	75	148	7.11e-16	75.1
MsG0880045170.01.T01	MTR_8g019710	51.613	62	30	0	126	187	38	99	8.82e-16	73.9
MsG0880045170.01.T01	MTR_8g093010	36.296	135	72	4	55	188	59	180	1.62e-15	75.1
MsG0880045170.01.T01	MTR_2g090950	33.628	113	70	2	80	187	56	168	1.74e-15	75.5
MsG0880045170.01.T01	MTR_8g073120	30.935	139	85	2	47	185	14	141	1.81e-15	74.7
MsG0880045170.01.T01	MTR_4g056590	42.105	76	39	1	114	189	100	170	2.59e-15	73.9
MsG0880045170.01.T01	MTR_3g078120	30.400	125	85	2	65	187	6	130	3.05e-15	72.8
MsG0880045170.01.T01	MTR_1g090480	33.582	134	83	3	56	186	16	146	4.49e-15	72.8
MsG0880045170.01.T01	MTR_5g076990	29.747	158	91	5	36	187	8	151	4.86e-15	75.1
MsG0880045170.01.T01	MTR_7g076250	33.028	109	70	3	114	222	63	168	5.11e-15	73.2
MsG0880045170.01.T01	MTR_8g028465	42.222	90	44	2	97	186	77	158	6.41e-15	73.2
MsG0880045170.01.T01	MTR_2g055790	31.298	131	72	4	58	188	34	146	7.11e-15	72.8
MsG0880045170.01.T01	MTR_3g071300	30.827	133	78	3	58	187	30	151	7.13e-15	72.4
MsG0880045170.01.T01	MTR_7g108855	43.836	73	41	0	115	187	67	139	7.25e-15	72.8
MsG0880045170.01.T01	MTR_2g436100	44.304	79	42	1	112	190	91	167	7.31e-15	74.3
MsG0880045170.01.T01	MTR_3g086730	29.697	165	89	6	59	218	1	143	7.40e-15	73.6
MsG0880045170.01.T01	MTR_8g092970	46.667	75	40	0	140	214	129	203	1.17e-14	72.8
MsG0880045170.01.T01	MTR_8g074900	46.479	71	32	1	114	184	158	222	1.60e-14	72.4
MsG0880045170.01.T01	MTR_8g092930	38.298	94	57	1	114	207	112	204	2.23e-14	72.0
MsG0880045170.01.T01	MTR_7g117540	30.769	130	83	2	58	187	24	146	2.25e-14	73.2
MsG0880045170.01.T01	MTR_8g092985	38.298	94	57	1	114	207	111	203	2.52e-14	71.6
MsG0880045170.01.T01	MTR_4g030070	31.325	166	99	5	100	262	69	222	2.69e-14	71.6
MsG0880045170.01.T01	MTR_3g464780	48.718	78	38	2	112	187	100	177	2.70e-14	72.4
MsG0880045170.01.T01	MTR_5g009210	32.576	132	81	2	54	185	235	358	2.90e-14	73.6
MsG0880045170.01.T01	MTR_8g023400	46.667	75	37	2	113	187	91	162	2.94e-14	73.2
MsG0880045170.01.T01	MTR_5g022920	64.444	45	16	0	140	184	187	231	3.66e-14	71.6
MsG0880045170.01.T01	MTR_5g009200	33.333	132	80	3	54	185	270	393	4.28e-14	73.2
MsG0880045170.01.T01	MTR_2g041200	32.353	136	79	3	57	187	27	154	5.05e-14	70.1
MsG0880045170.01.T01	MTR_8g099515	40.741	81	48	0	113	193	308	388	5.80e-14	72.8
MsG0880045170.01.T01	MTR_8g092990	47.059	68	36	0	140	207	139	206	6.18e-14	70.9
MsG0880045170.01.T01	MTR_8g066740	28.481	158	93	5	36	187	8	151	6.29e-14	72.0
MsG0880045170.01.T01	MTR_4g094725	29.054	148	91	3	39	184	13	148	7.80e-14	68.9
MsG0880045170.01.T01	MTR_3g114500	30.769	130	71	3	58	187	6	116	8.96e-14	67.8
MsG0880045170.01.T01	MTR_8g099495	37.895	95	49	1	101	185	296	390	9.26e-14	72.4
MsG0880045170.01.T01	MTR_5g092790	56.522	46	20	0	142	187	185	230	1.04e-13	70.5
MsG0880045170.01.T01	MTR_5g092750	56.522	46	20	0	142	187	185	230	1.23e-13	70.1
MsG0880045170.01.T01	MTR_1g056350	40.217	92	52	2	110	199	70	160	1.59e-13	68.2
MsG0880045170.01.T01	MTR_7g079290	40.541	74	42	1	114	185	125	198	2.22e-13	68.9
MsG0880045170.01.T01	MTR_6g055030	32.727	110	68	2	114	222	97	201	3.15e-13	70.1
MsG0880045170.01.T01	MTR_5g009190	40.541	74	44	0	112	185	264	337	3.61e-13	70.1
MsG0880045170.01.T01	MTR_8g032690	38.462	65	40	0	139	203	16	80	3.70e-13	65.5
MsG0880045170.01.T01	MTR_3g078520	38.571	70	43	0	117	186	78	147	4.30e-13	67.0
MsG0880045170.01.T01	MTR_2g035800	30.282	142	84	4	58	199	32	158	4.90e-13	66.6
MsG0880045170.01.T01	MTR_3g095560	62.222	45	17	0	140	184	134	178	4.93e-13	68.6
MsG0880045170.01.T01	MTR_3g116000	57.778	45	19	0	140	184	102	146	9.91e-13	66.6
MsG0880045170.01.T01	MTR_3g012550	27.068	133	96	1	54	186	21	152	3.56e-12	64.7
MsG0880045170.01.T01	MTR_6g055030	39.773	88	43	2	140	222	88	170	4.86e-12	66.2
MsG0880045170.01.T01	MTR_3g078540	29.412	136	74	5	55	186	6	123	1.01e-11	62.8
MsG0880045170.01.T01	MTR_6g007680	53.191	47	22	0	141	187	65	111	1.05e-11	62.8
MsG0880045170.01.T01	MTR_1g090460	44.737	76	32	3	127	195	83	155	1.86e-11	62.0
MsG0880045170.01.T01	MTR_7g117350	37.975	79	45	1	114	188	282	360	1.97e-11	65.1
MsG0880045170.01.T01	MTR_3g081030	55.319	47	21	0	142	188	119	165	2.13e-11	63.2
MsG0880045170.01.T01	MTR_7g117350	37.975	79	45	1	114	188	290	368	2.17e-11	65.1
MsG0880045170.01.T01	MTR_3g087900	50.847	59	27	2	141	198	68	125	3.06e-11	61.6
MsG0880045170.01.T01	MTR_4g108830	50.000	48	24	0	140	187	144	191	4.07e-11	62.0
MsG0880045170.01.T01	MTR_5g071930	34.043	94	55	2	114	207	66	152	4.50e-11	62.0
MsG0880045170.01.T01	MTR_4g108830	50.000	48	24	0	140	187	172	219	4.59e-11	62.4
MsG0880045170.01.T01	MTR_7g059360	53.191	47	22	0	141	187	157	203	6.68e-11	62.0
MsG0880045170.01.T01	MTR_5g096410	36.170	94	46	2	107	187	234	326	9.41e-11	62.8
MsG0880045170.01.T01	MTR_5g096410	36.170	94	46	2	107	187	243	335	9.51e-11	62.8
MsG0880045170.01.T01	MTR_5g096410	36.170	94	46	2	107	187	246	338	9.66e-11	62.8
MsG0880045170.01.T01	MTR_8g027980	54.000	50	21	1	141	188	116	165	9.92e-11	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045170.01.T01	AT4G17905	38.567	363	148	14	2	350	3	304	3.47e-62	201
MsG0880045170.01.T01	AT4G17905	38.567	363	148	14	2	350	29	330	7.14e-62	201
MsG0880045170.01.T01	AT5G17600	38.978	372	178	12	7	349	5	356	2.11e-59	196
MsG0880045170.01.T01	AT3G03550	38.218	348	149	12	1	315	1	315	3.09e-57	190
MsG0880045170.01.T01	AT5G43420	39.744	156	65	5	55	187	34	183	5.38e-30	118
MsG0880045170.01.T01	AT1G72220	31.818	264	143	7	3	233	7	266	6.49e-30	119
MsG0880045170.01.T01	AT1G04360	42.177	147	63	3	55	187	41	179	1.01e-29	117
MsG0880045170.01.T01	AT5G10380	37.572	173	96	3	109	281	104	264	4.00e-24	100
MsG0880045170.01.T01	AT4G40070	33.333	153	87	3	36	187	31	169	1.56e-23	99.8
MsG0880045170.01.T01	AT5G40250	30.374	214	133	4	56	253	42	255	3.89e-23	99.4
MsG0880045170.01.T01	AT1G72200	30.348	201	129	5	55	249	59	254	4.72e-23	99.8
MsG0880045170.01.T01	AT1G23980	36.129	155	84	4	56	200	50	199	5.06e-23	99.0
MsG0880045170.01.T01	AT2G20030	30.830	253	158	9	35	279	20	263	4.28e-22	96.7
MsG0880045170.01.T01	AT4G33565	45.192	104	53	2	109	210	186	287	4.60e-22	96.3
MsG0880045170.01.T01	AT1G22500	32.075	159	102	3	48	205	28	181	2.43e-21	94.4
MsG0880045170.01.T01	AT4G28890	37.107	159	85	6	37	187	17	168	1.52e-20	92.8
MsG0880045170.01.T01	AT3G18930	33.529	170	72	3	55	188	38	202	3.45e-20	91.3
MsG0880045170.01.T01	AT3G18930	33.529	170	72	3	55	188	38	202	3.45e-20	91.3
MsG0880045170.01.T01	AT3G18930	33.529	170	72	3	55	188	38	202	3.45e-20	91.3
MsG0880045170.01.T01	AT3G48030	52.381	84	37	2	114	196	102	183	6.12e-20	88.6
MsG0880045170.01.T01	AT3G10910	37.410	139	77	4	54	188	28	160	6.83e-20	86.7
MsG0880045170.01.T01	AT3G48030	52.381	84	37	2	114	196	180	261	8.57e-20	89.7
MsG0880045170.01.T01	AT5G01880	47.500	80	40	1	114	193	79	156	1.47e-19	85.1
MsG0880045170.01.T01	AT3G05200	28.333	180	111	5	47	221	33	199	3.17e-19	88.6
MsG0880045170.01.T01	AT4G15975	51.351	74	33	1	114	187	51	121	1.03e-18	84.7
MsG0880045170.01.T01	AT2G18650	39.450	109	65	1	89	197	74	181	1.67e-18	86.7
MsG0880045170.01.T01	AT5G57750	33.582	134	82	3	56	184	33	164	3.12e-18	82.8
MsG0880045170.01.T01	AT1G28040	32.867	143	87	2	47	186	161	297	9.63e-18	83.2
MsG0880045170.01.T01	AT5G27420	29.213	178	104	5	47	207	28	200	1.41e-17	83.6
MsG0880045170.01.T01	AT2G47560	47.297	74	39	0	114	187	80	153	1.58e-17	80.9
MsG0880045170.01.T01	AT2G35000	34.328	134	76	4	62	187	51	180	1.69e-17	83.2
MsG0880045170.01.T01	AT1G76410	34.058	138	83	3	47	184	17	146	1.71e-17	80.1
MsG0880045170.01.T01	AT4G09100	46.667	75	39	1	114	187	56	130	4.53e-17	77.4
MsG0880045170.01.T01	AT2G27940	45.205	73	37	1	114	186	115	184	7.04e-17	79.3
MsG0880045170.01.T01	AT3G62690	49.315	73	35	1	115	187	88	158	8.46e-17	79.7
MsG0880045170.01.T01	AT1G53820	45.122	82	42	2	114	195	95	173	2.97e-16	79.0
MsG0880045170.01.T01	AT4G30400	41.053	95	55	1	90	184	83	176	3.08e-16	80.1
MsG0880045170.01.T01	AT1G35330	27.891	147	97	3	47	187	31	174	6.91e-16	78.2
MsG0880045170.01.T01	AT3G16720	47.436	78	38	2	110	187	90	164	7.95e-16	77.4
MsG0880045170.01.T01	AT2G34990	30.000	130	88	2	56	184	11	138	1.93e-15	76.3
MsG0880045170.01.T01	AT5G66070	63.043	46	17	0	139	184	173	218	2.16e-15	74.7
MsG0880045170.01.T01	AT5G66070	63.043	46	17	0	139	184	173	218	2.16e-15	74.7
MsG0880045170.01.T01	AT2G34990	30.000	130	88	2	56	184	33	160	2.22e-15	76.6
MsG0880045170.01.T01	AT2G46160	43.678	87	43	1	114	194	104	190	2.30e-15	74.7
MsG0880045170.01.T01	AT2G46160	43.678	87	43	1	114	194	104	190	2.30e-15	74.7
MsG0880045170.01.T01	AT4G10160	30.000	150	94	4	90	232	44	189	2.73e-15	74.7
MsG0880045170.01.T01	AT5G05280	35.606	132	71	5	58	188	41	159	2.85e-15	73.6
MsG0880045170.01.T01	AT4G09130	42.667	75	42	1	114	187	91	165	3.37e-15	76.3
MsG0880045170.01.T01	AT2G35910	39.535	86	50	1	114	199	121	204	3.69e-15	74.3
MsG0880045170.01.T01	AT5G66070	63.043	46	17	0	139	184	197	242	4.25e-15	74.7
MsG0880045170.01.T01	AT3G61550	40.000	90	45	2	106	186	91	180	4.31e-15	73.9
MsG0880045170.01.T01	AT2G17450	27.815	151	96	3	34	184	7	144	4.99e-15	73.2
MsG0880045170.01.T01	AT3G14320	35.577	104	56	2	114	217	63	155	5.62e-15	73.2
MsG0880045170.01.T01	AT2G46493	36.000	100	62	1	87	186	85	182	5.78e-15	72.8
MsG0880045170.01.T01	AT1G32361	39.796	98	49	3	88	184	108	196	5.81e-15	75.5
MsG0880045170.01.T01	AT2G46494	34.074	135	84	3	54	186	229	360	6.11e-15	75.5
MsG0880045170.01.T01	AT2G42360	29.577	142	93	3	46	187	19	153	6.37e-15	73.9
MsG0880045170.01.T01	AT5G05810	44.595	74	39	1	114	187	120	191	7.58e-15	75.5
MsG0880045170.01.T01	AT4G09120	41.333	75	43	1	114	187	94	168	1.28e-14	74.3
MsG0880045170.01.T01	AT3G60220	46.479	71	37	1	120	189	94	164	1.79e-14	73.9
MsG0880045170.01.T01	AT2G42350	36.937	111	56	3	76	185	46	143	1.84e-14	72.0
MsG0880045170.01.T01	AT5G06490	26.452	155	91	3	63	194	27	181	2.25e-14	71.6
MsG0880045170.01.T01	AT4G09110	40.000	75	44	1	114	187	94	168	2.33e-14	73.2
MsG0880045170.01.T01	AT5G07040	30.159	126	82	2	63	186	17	138	3.42e-14	70.1
MsG0880045170.01.T01	AT3G11110	33.333	144	84	5	45	187	20	152	3.76e-14	69.7
MsG0880045170.01.T01	AT2G17730	60.870	46	18	0	142	187	196	241	4.77e-14	71.6
MsG0880045170.01.T01	AT4G10150	26.471	204	129	5	40	232	10	203	4.84e-14	71.2
MsG0880045170.01.T01	AT1G49230	33.113	151	80	5	39	184	39	173	6.82e-14	70.5
MsG0880045170.01.T01	AT5G47610	43.750	64	36	0	131	194	96	159	1.01e-13	68.9
MsG0880045170.01.T01	AT4G35480	44.776	67	30	1	140	199	111	177	1.03e-13	69.7
MsG0880045170.01.T01	AT1G20823	28.671	143	86	3	49	184	20	153	1.10e-13	69.7
MsG0880045170.01.T01	AT4G35840	65.116	43	15	0	142	184	191	233	1.21e-13	70.1
MsG0880045170.01.T01	AT2G35420	43.662	71	38	1	114	184	77	145	1.42e-13	70.5
MsG0880045170.01.T01	AT1G49220	30.137	146	91	4	40	185	44	178	1.66e-13	70.1
MsG0880045170.01.T01	AT5G46650	31.818	132	83	3	58	187	34	160	1.80e-13	70.5
MsG0880045170.01.T01	AT1G72310	38.710	93	52	3	110	200	98	187	3.32e-13	70.1
MsG0880045170.01.T01	AT5G53110	33.333	126	80	2	61	186	253	374	5.88e-13	69.7
MsG0880045170.01.T01	AT2G25410	44.444	81	40	3	109	186	293	371	1.19e-12	68.9
MsG0880045170.01.T01	AT1G49210	28.000	150	97	4	35	184	39	177	1.20e-12	67.0
MsG0880045170.01.T01	AT4G17920	30.719	153	93	5	40	187	11	155	1.58e-12	67.8
MsG0880045170.01.T01	AT3G60966	42.466	73	40	1	142	212	62	134	2.54e-12	64.3
MsG0880045170.01.T01	AT2G46495	33.108	148	83	4	46	186	226	364	2.95e-12	67.8
MsG0880045170.01.T01	AT2G18670	39.241	79	47	1	109	187	78	155	3.09e-12	65.1
MsG0880045170.01.T01	AT1G49200	26.174	149	99	4	36	184	41	178	4.05e-12	65.5
MsG0880045170.01.T01	AT2G46495	44.578	83	35	2	110	186	259	336	6.15e-12	66.6
MsG0880045170.01.T01	AT1G33480	43.548	62	30	1	123	184	86	142	7.16e-12	65.5
MsG0880045170.01.T01	AT1G74410	48.980	49	25	0	139	187	173	221	1.16e-11	64.3
MsG0880045170.01.T01	AT1G51930	52.000	50	24	0	142	191	80	129	1.35e-11	62.0
MsG0880045170.01.T01	AT4G17245	45.312	64	34	1	140	202	100	163	1.51e-11	62.8
MsG0880045170.01.T01	AT3G19140	41.026	78	43	2	110	187	50	124	1.57e-11	62.0
MsG0880045170.01.T01	AT4G24015	31.373	102	70	0	86	187	49	150	1.58e-11	62.8
MsG0880045170.01.T01	AT1G80400	56.522	46	19	1	142	187	355	399	1.74e-11	65.5
MsG0880045170.01.T01	AT5G58580	34.783	92	59	1	114	205	111	201	2.68e-11	64.3
MsG0880045170.01.T01	AT4G30370	38.667	75	44	1	114	188	89	161	3.61e-11	62.0
MsG0880045170.01.T01	AT5G42200	47.917	48	25	0	140	187	102	149	5.80e-11	60.8

Find 48 sgRNAs with CRISPR-Local

Find 62 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATCCATGTTGTTGGATAAT+TGG	0.141569	8:+55111644	None:intergenic
TCCTCTTGTTATTGCAATCT+TGG	0.197966	8:-55111487	MsG0880045170.01.T01:CDS
AACTGTCAAATTTCAACCTT+TGG	0.301419	8:-55111336	MsG0880045170.01.T01:CDS
CATAAATAAAATTCTCAAAT+AGG	0.310699	8:+55110592	None:intergenic
GATCGGAAGGTCAGTGTCTA+TGG	0.318014	8:-55110866	MsG0880045170.01.T01:CDS
GTAAAATTGATAGAGGAAAA+AGG	0.320392	8:-55110627	MsG0880045170.01.T01:CDS
AACGATCTCTTCATTGCAAT+TGG	0.329260	8:+55110673	None:intergenic
ATGGATCATTCATTTCAAAA+TGG	0.338983	8:-55110847	MsG0880045170.01.T01:CDS
CCTCTTGTTATTGCAATCTT+GGG	0.352229	8:-55111486	MsG0880045170.01.T01:CDS
GATTTCATCAACTGGGTCAT+TGG	0.374280	8:+55111377	None:intergenic
ATCCATGTTGTTGGATAATT+GGG	0.383221	8:+55111645	None:intergenic
CAATCTTTGCTGTTTATGTA+AGG	0.387421	8:+55111621	None:intergenic
TCACTTGGTAAAATTGATAG+AGG	0.401304	8:-55110634	MsG0880045170.01.T01:CDS
TATTGAAATGGTGGAGGTGG+TGG	0.407936	8:+55111540	None:intergenic
TGAAAAGTTTCATTTCTTGA+AGG	0.410985	8:+55111036	None:intergenic
ATAACAAGAGGAGAGAAATA+TGG	0.423360	8:+55111498	None:intergenic
ATCTTCCTTGTATTGATACA+TGG	0.431852	8:-55111158	MsG0880045170.01.T01:CDS
AACACATCATGTTCAAGTTC+CGG	0.446335	8:-55111076	MsG0880045170.01.T01:CDS
TCACTAAAAGCGCGCAATGA+AGG	0.452791	8:+55110949	None:intergenic
TGAAATGGTGGAGGTGGTGG+AGG	0.461217	8:+55111543	None:intergenic
ATGTAAGGAATCCATGTTGT+TGG	0.471174	8:+55111636	None:intergenic
TCATCATCAGGGTATTGAAA+TGG	0.478045	8:+55111528	None:intergenic
AACAGCAAAGATTGTTCTCA+AGG	0.495067	8:-55111612	MsG0880045170.01.T01:CDS
GGGTATTGAAATGGTGGAGG+TGG	0.504961	8:+55111537	None:intergenic
TCATGTTCAAGTTCCGGCTA+CGG	0.523483	8:-55111070	MsG0880045170.01.T01:CDS
TTGTGAAGAGGGATGTTCAC+TGG	0.530654	8:-55110776	MsG0880045170.01.T01:CDS
AAGGAGAAAGTAGTAAATCA+AGG	0.536690	8:-55110729	MsG0880045170.01.T01:CDS
GGAAGTTCTATAACCGTAGC+CGG	0.557787	8:+55111057	None:intergenic
GAAGATGATTCTTGTGAAGA+GGG	0.563536	8:-55110787	MsG0880045170.01.T01:CDS
TGAAGATGATTCTTGTGAAG+AGG	0.563612	8:-55110788	MsG0880045170.01.T01:CDS
TTGAGCATCATCTAAACCAA+AGG	0.567832	8:+55111320	None:intergenic
CCCAAGATTGCAATAACAAG+AGG	0.569705	8:+55111486	None:intergenic
AGTGATTTATGTAATTTGCA+AGG	0.571415	8:-55110931	MsG0880045170.01.T01:CDS
TTGAGCCATGTATCAATACA+AGG	0.575815	8:+55111153	None:intergenic
TTTGTTGGATTTCATCAACT+GGG	0.585830	8:+55111370	None:intergenic
TCATCAGGGTATTGAAATGG+TGG	0.592002	8:+55111531	None:intergenic
GATGAAGTTTGTGAATCGAT+CGG	0.596066	8:-55110883	MsG0880045170.01.T01:CDS
GAGGGATGTTCACTGGATGT+TGG	0.604883	8:-55110769	MsG0880045170.01.T01:CDS
ACTCTAATATCTAAATATTG+TGG	0.608534	8:-55111426	MsG0880045170.01.T01:CDS
TCAGGGTATTGAAATGGTGG+AGG	0.616494	8:+55111534	None:intergenic
AAGTTTGTGAATCGATCGGA+AGG	0.619893	8:-55110879	MsG0880045170.01.T01:CDS
AGAAGAGCAACAAATAGTTG+TGG	0.625083	8:-55111013	MsG0880045170.01.T01:CDS
TCATAGTAGAGTTGAGTCGA+AGG	0.628315	8:-55110974	MsG0880045170.01.T01:CDS
TAAACTATATAGCACCATTG+TGG	0.641826	8:+55111570	None:intergenic
AATACGCTAGAACGACATAG+AGG	0.649889	8:+55111114	None:intergenic
GTCCCAATTATCCAACAACA+TGG	0.686792	8:-55111647	MsG0880045170.01.T01:CDS
GGTTCATCAAAGATATCACA+AGG	0.689439	8:-55110748	MsG0880045170.01.T01:CDS
GTAGCGTGTATTGTCCACAA+TGG	0.715092	8:-55111584	MsG0880045170.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ACTCTAATATCTAAATATTG+TGG	-	Chr8:55110834-55110853	MsG0880045170.01.T01:CDS	20.0%
!!	TTTGTATTTAAAAACTGCAA+TGG	+	Chr8:55110973-55110992	None:intergenic	20.0%
!!!	GCAGTTTTTAAATACAAAAA+AGG	-	Chr8:55110975-55110994	MsG0880045170.01.T01:CDS	20.0%
!!!	TTTCAAAATGGTTTTTCAAT+TGG	-	Chr8:55111425-55111444	MsG0880045170.01.T01:CDS	20.0%
!	ATGGATCATTCATTTCAAAA+TGG	-	Chr8:55111413-55111432	MsG0880045170.01.T01:CDS	25.0%
!	GTAAAATTGATAGAGGAAAA+AGG	-	Chr8:55111633-55111652	MsG0880045170.01.T01:CDS	25.0%
!	TGAAAAGTTTCATTTCTTGA+AGG	+	Chr8:55111227-55111246	None:intergenic	25.0%
!!	AGTGATTTATGTAATTTGCA+AGG	-	Chr8:55111329-55111348	MsG0880045170.01.T01:CDS	25.0%
	AACTGTCAAATTTCAACCTT+TGG	-	Chr8:55110924-55110943	MsG0880045170.01.T01:CDS	30.0%
	AAGGAGAAAGTAGTAAATCA+AGG	-	Chr8:55111531-55111550	MsG0880045170.01.T01:CDS	30.0%
	AATCCATGTTGTTGGATAAT+TGG	+	Chr8:55110619-55110638	None:intergenic	30.0%
	AGTTAGTAGTAAAAAAGCAG+TGG	+	Chr8:55110808-55110827	None:intergenic	30.0%
	ATAACAAGAGGAGAGAAATA+TGG	+	Chr8:55110765-55110784	None:intergenic	30.0%
	ATCCATGTTGTTGGATAATT+GGG	+	Chr8:55110618-55110637	None:intergenic	30.0%
	TAAACTATATAGCACCATTG+TGG	+	Chr8:55110693-55110712	None:intergenic	30.0%
	TACAAGGAAGATGAAAAACA+TGG	+	Chr8:55111094-55111113	None:intergenic	30.0%
	TCACTTGGTAAAATTGATAG+AGG	-	Chr8:55111626-55111645	MsG0880045170.01.T01:CDS	30.0%
	TGAAAAACATGGTTACACAT+TGG	+	Chr8:55111083-55111102	None:intergenic	30.0%
	TTTGTTGGATTTCATCAACT+GGG	+	Chr8:55110893-55110912	None:intergenic	30.0%
!	ATCTTCCTTGTATTGATACA+TGG	-	Chr8:55111102-55111121	MsG0880045170.01.T01:CDS	30.0%
!	ATGAAGAGATCGTTTTCTAA+TGG	-	Chr8:55111596-55111615	MsG0880045170.01.T01:CDS	30.0%
!	TCTAATGGAAGATTTTCACT+TGG	-	Chr8:55111611-55111630	MsG0880045170.01.T01:CDS	30.0%
!	TTGAAATTTGACAGTTTTCG+CGG	+	Chr8:55110920-55110939	None:intergenic	30.0%
!	TTTTGTTGGATTTCATCAAC+TGG	+	Chr8:55110894-55110913	None:intergenic	30.0%
!!	CAATCTTTGCTGTTTATGTA+AGG	+	Chr8:55110642-55110661	None:intergenic	30.0%
!!!	ATGGTTTTGAATCATCATCA+GGG	+	Chr8:55110746-55110765	None:intergenic	30.0%
!!!	TATGGTTTTGAATCATCATC+AGG	+	Chr8:55110747-55110766	None:intergenic	30.0%
	AACAGCAAAGATTGTTCTCA+AGG	-	Chr8:55110648-55110667	MsG0880045170.01.T01:CDS	35.0%
	AACGATCTCTTCATTGCAAT+TGG	+	Chr8:55111590-55111609	None:intergenic	35.0%
	AATTGATAGAGGAAAAAGGC+AGG	-	Chr8:55111637-55111656	MsG0880045170.01.T01:CDS	35.0%
	AGAAGAGCAACAAATAGTTG+TGG	-	Chr8:55111247-55111266	MsG0880045170.01.T01:CDS	35.0%
	ATGTAAGGAATCCATGTTGT+TGG	+	Chr8:55110627-55110646	None:intergenic	35.0%
	ATTGATAGAGGAAAAAGGCA+GGG	-	Chr8:55111638-55111657	MsG0880045170.01.T01:CDS	35.0%
	GAAGATGATTCTTGTGAAGA+GGG	-	Chr8:55111473-55111492	MsG0880045170.01.T01:CDS	35.0%
	GATGAAGTTTGTGAATCGAT+CGG	-	Chr8:55111377-55111396	MsG0880045170.01.T01:CDS	35.0%
	GGTTCATCAAAGATATCACA+AGG	-	Chr8:55111512-55111531	MsG0880045170.01.T01:CDS	35.0%
	TGAAGATGATTCTTGTGAAG+AGG	-	Chr8:55111472-55111491	MsG0880045170.01.T01:CDS	35.0%
	TTGAGCATCATCTAAACCAA+AGG	+	Chr8:55110943-55110962	None:intergenic	35.0%
	TTGAGCCATGTATCAATACA+AGG	+	Chr8:55111110-55111129	None:intergenic	35.0%
!	AACACATCATGTTCAAGTTC+CGG	-	Chr8:55111184-55111203	MsG0880045170.01.T01:CDS	35.0%
!!	CCTCTTGTTATTGCAATCTT+GGG	-	Chr8:55110774-55110793	MsG0880045170.01.T01:CDS	35.0%
!!	TCATCATCAGGGTATTGAAA+TGG	+	Chr8:55110735-55110754	None:intergenic	35.0%
!!	TCCTCTTGTTATTGCAATCT+TGG	-	Chr8:55110773-55110792	MsG0880045170.01.T01:CDS	35.0%
	AAGTTTGTGAATCGATCGGA+AGG	-	Chr8:55111381-55111400	MsG0880045170.01.T01:CDS	40.0%
	AATACGCTAGAACGACATAG+AGG	+	Chr8:55111149-55111168	None:intergenic	40.0%
	CCCAAGATTGCAATAACAAG+AGG	+	Chr8:55110777-55110796	None:intergenic	40.0%
	GATTTCATCAACTGGGTCAT+TGG	+	Chr8:55110886-55110905	None:intergenic	40.0%
	GTCCCAATTATCCAACAACA+TGG	-	Chr8:55110613-55110632	MsG0880045170.01.T01:CDS	40.0%
	TCATAGTAGAGTTGAGTCGA+AGG	-	Chr8:55111286-55111305	MsG0880045170.01.T01:CDS	40.0%
!!	TCATCAGGGTATTGAAATGG+TGG	+	Chr8:55110732-55110751	None:intergenic	40.0%
	GGAAGTTCTATAACCGTAGC+CGG	+	Chr8:55111206-55111225	None:intergenic	45.0%
	GTAGCGTGTATTGTCCACAA+TGG	-	Chr8:55110676-55110695	MsG0880045170.01.T01:CDS	45.0%
	TTGTGAAGAGGGATGTTCAC+TGG	-	Chr8:55111484-55111503	MsG0880045170.01.T01:CDS	45.0%
!	AGTTTTCGCGGCGATTTTGT+TGG	+	Chr8:55110908-55110927	None:intergenic	45.0%
!	TATTGAAATGGTGGAGGTGG+TGG	+	Chr8:55110723-55110742	None:intergenic	45.0%
!	TCACTAAAAGCGCGCAATGA+AGG	+	Chr8:55111314-55111333	None:intergenic	45.0%
!	TCATGTTCAAGTTCCGGCTA+CGG	-	Chr8:55111190-55111209	MsG0880045170.01.T01:CDS	45.0%
!!	TCAGGGTATTGAAATGGTGG+AGG	+	Chr8:55110729-55110748	None:intergenic	45.0%
	GAGGGATGTTCACTGGATGT+TGG	-	Chr8:55111491-55111510	MsG0880045170.01.T01:CDS	50.0%
	GATCGGAAGGTCAGTGTCTA+TGG	-	Chr8:55111394-55111413	MsG0880045170.01.T01:CDS	50.0%
!!	GGGTATTGAAATGGTGGAGG+TGG	+	Chr8:55110726-55110745	None:intergenic	50.0%
!	TGAAATGGTGGAGGTGGTGG+AGG	+	Chr8:55110720-55110739	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	55110606	55111676	55110606	ID=MsG0880045170.01;Name=MsG0880045170.01
Chr8	mRNA	55110606	55111676	55110606	ID=MsG0880045170.01.T01;Parent=MsG0880045170.01;Name=MsG0880045170.01.T01;_AED=0.24;_eAED=0.24;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|356
Chr8	exon	55110606	55111676	55110606	ID=MsG0880045170.01.T01:exon:23807;Parent=MsG0880045170.01.T01
Chr8	CDS	55110606	55111676	55110606	ID=MsG0880045170.01.T01:cds;Parent=MsG0880045170.01.T01

Gene Sequence

>MsG0880045170.01.T01

ATGTCGCGTCCCAATTATCCAACAACATGGATTCCTTACATAAACAGCAAAGATTGTTCTCAAGGATTTTGTAGCGTGTATTGTCCACAATGGTGCTATATAGTTTACACTCCTCCACCACCTCCACCATTTCAATACCCTGATGATGATTCAAAACCATATTTCTCTCCTCTTGTTATTGCAATCTTGGGAGTTTTAGCCACTGCTTTTTTACTACTAACTTATTACACTCTAATATCTAAATATTGTGGTCACAGAGAATCTTCAAGAAGAAACACCAATGACCCAGTTGATGAAATCCAACAAAATCGCCGCGAAAACTGTCAAATTTCAACCTTTGGTTTAGATGATGCTCAAATAAAATCCATTGCAGTTTTTAAATACAAAAAAGGAGATGCTTTTTTTAGTACTGCTGTCACAGATTGTTCAGTTTGTCTAAGTGAGTTTCAAGATGATGAAAGTGTTAGACTTTTACCAATGTGTAACCATGTTTTTCATCTTCCTTGTATTGATACATGGCTCAAATCTAACTCTAGTTGTCCTCTATGTCGTTCTAGCGTATTCACTATGAATGCTTCAACACATCATGTTCAAGTTCCGGCTACGGTTATAGAACTTCCTTCAAGAAATGAAACTTTTCAAGAAGAGCAACAAATAGTTGTGGAAGAAGCAATGATGCATCATAGTAGAGTTGAGTCGAAGGCGCCTTCATTGCGCGCTTTTAGTGATTTATGTAATTTGCAAGGAAGAGAAAGTATAATTGAAATTAGAGATGAAGTTTGTGAATCGATCGGAAGGTCAGTGTCTATGGATCATTCATTTCAAAATGGTTTTTCAATTGGTGATGTGTTGAATATGAATGAAGATGAAGATGATTCTTGTGAAGAGGGATGTTCACTGGATGTTGGTTCATCAAAGATATCACAAGGAGAAAGTAGTAAATCAAGGTACAAAAGAAGAGTGTTGCATTGTGTTATGAGTCCAATTGCAATGAAGAGATCGTTTTCTAATGGAAGATTTTCACTTGGTAAAATTGATAGAGGAAAAAGGCAGGGAATTTTGCCTATTTGA

Protein sequence

>MsG0880045170.01.T01

MSRPNYPTTWIPYINSKDCSQGFCSVYCPQWCYIVYTPPPPPPFQYPDDDSKPYFSPLVIAILGVLATAFLLLTYYTLISKYCGHRESSRRNTNDPVDEIQQNRRENCQISTFGLDDAQIKSIAVFKYKKGDAFFSTAVTDCSVCLSEFQDDESVRLLPMCNHVFHLPCIDTWLKSNSSCPLCRSSVFTMNASTHHVQVPATVIELPSRNETFQEEQQIVVEEAMMHHSRVESKAPSLRAFSDLCNLQGRESIIEIRDEVCESIGRSVSMDHSFQNGFSIGDVLNMNEDEDDSCEEGCSLDVGSSKISQGESSKSRYKRRVLHCVMSPIAMKRSFSNGRFSLGKIDRGKRQGILPI*