AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000459.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000459.01.T01 MTR_1g015410 98.035 509 10 0 1 509 1 509 0.0 1043
MsG0180000459.01.T01 MTR_3g036100 46.973 479 229 9 37 506 81 543 2.44e-151 444
MsG0180000459.01.T01 MTR_4g044110 45.607 478 240 7 37 505 57 523 4.64e-149 437
MsG0180000459.01.T01 MTR_7g090920 44.223 502 254 10 18 505 49 538 1.86e-147 434
MsG0180000459.01.T01 MTR_3g112350 47.579 475 232 10 37 503 57 522 8.42e-142 419
MsG0180000459.01.T01 MTR_2g039410 43.487 499 243 13 36 506 53 540 4.21e-133 397
MsG0180000459.01.T01 MTR_4g126150 40.472 509 265 13 17 505 37 527 1.94e-130 389
MsG0180000459.01.T01 MTR_4g126160 42.887 485 244 14 35 504 52 518 6.59e-122 367
MsG0180000459.01.T01 MTR_2g039340 39.811 530 268 13 1 503 16 521 3.30e-121 365
MsG0180000459.01.T01 MTR_0005s0070 47.170 265 122 5 50 306 1 255 3.58e-78 246
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000459.01.T01 AT5G21482 61.185 523 186 5 1 506 1 523 0.0 655
MsG0180000459.01.T01 AT2G41510 45.570 474 243 8 38 505 77 541 5.57e-147 433
MsG0180000459.01.T01 AT2G41510 45.474 475 244 8 37 505 138 603 2.16e-146 434
MsG0180000459.01.T01 AT3G63440 45.303 479 242 8 37 505 60 528 1.10e-144 426
MsG0180000459.01.T01 AT1G75450 47.737 486 234 13 29 503 44 520 4.65e-143 422
MsG0180000459.01.T01 AT1G75450 47.639 487 234 14 29 503 40 517 2.46e-141 417
MsG0180000459.01.T01 AT5G56970 42.585 472 258 7 37 505 58 519 1.76e-128 384
MsG0180000459.01.T01 AT2G19500 41.263 475 257 11 35 503 43 501 1.29e-117 355
MsG0180000459.01.T01 AT4G29740 40.412 485 264 9 35 504 50 524 8.39e-117 354
MsG0180000459.01.T01 AT2G41510 45.522 402 196 9 16 405 50 440 8.53e-112 338
MsG0180000459.01.T01 AT5G56970 44.086 372 199 6 37 405 58 423 1.32e-98 304
MsG0180000459.01.T01 AT4G29740 40.155 386 209 8 35 405 50 428 3.50e-84 267
MsG0180000459.01.T01 AT4G29740 44.490 245 122 3 35 266 50 293 5.86e-63 210

Find 178 sgRNAs with CRISPR-Local

Find 523 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTATTTAAGTTGGTTTC+TGG 0.147486 1:+6377575 None:intergenic
GACAAACCGGGTTGAAAATT+TGG 0.149145 1:+6382647 None:intergenic
TCTTTACTAGCGATGGAATT+AGG 0.152257 1:+6383630 None:intergenic
ATAATTTGAATTACCATATC+TGG 0.190405 1:+6383060 None:intergenic
CGCCATGGCTTGGCCGTTGA+TGG 0.241138 1:+6383476 None:intergenic
ACGTTTCCGGTGGGGCATTA+TGG 0.267117 1:-6383371 MsG0180000459.01.T01:CDS
TGCGACACTTTGGGGATAAA+TGG 0.271384 1:-6377668 MsG0180000459.01.T01:CDS
TTTGCTTCACTTGGTGGTCT+TGG 0.275872 1:-6383129 MsG0180000459.01.T01:CDS
CTTTACTAGCGATGGAATTA+GGG 0.278545 1:+6383631 None:intergenic
GTTCCACACGTCGACGTTTC+CGG 0.291921 1:-6383384 MsG0180000459.01.T01:CDS
GGTAAGCTATCATGTTTGTT+TGG 0.300397 1:+6383736 None:intergenic
TACCTTGAACACTTCGTTCA+TGG 0.302711 1:-6383717 MsG0180000459.01.T01:CDS
GGGACCACCTACTGATAAAT+TGG 0.310615 1:-6377784 MsG0180000459.01.T01:CDS
GGCTTGTTGAAGAACGATTC+TGG 0.324479 1:+6383083 None:intergenic
TGATGAACCATTGTAGTAAT+TGG 0.325750 1:+6377446 None:intergenic
ACCACATCGGCGGTGGTGTA+AGG 0.326905 1:+6383564 None:intergenic
AACGGCAAACGTAACGGAAT+TGG 0.333855 1:-6383214 MsG0180000459.01.T01:CDS
AGAATTGGATGCGACACTTT+GGG 0.334189 1:-6377677 MsG0180000459.01.T01:CDS
CGTTTCCGGTGGGGCATTAT+GGG 0.338199 1:-6383370 MsG0180000459.01.T01:CDS
CTAATTAATATTATTTAAGT+TGG 0.346858 1:+6377568 None:intergenic
GTTTGTCTTCCTTCTTCAGC+TGG 0.347023 1:-6382631 MsG0180000459.01.T01:CDS
GCGGAGTACGGCGAGGGGAG+TGG 0.353548 1:+6383587 None:intergenic
TCCGTTACGTTTGCCGTTTG+AGG 0.363428 1:+6383219 None:intergenic
CTTGGTGGTCTTGGTCAGTT+TGG 0.364537 1:-6383120 MsG0180000459.01.T01:CDS
AACCATTGTAGTAATTGGTT+GGG 0.364988 1:+6377451 None:intergenic
GTAAGCTATCATGTTTGTTT+GGG 0.372447 1:+6383737 None:intergenic
TAATCAAAACCGTCACCTTC+TGG 0.374704 1:+6382742 None:intergenic
ACGGAATTGGAAGTTGTTAC+TGG 0.376042 1:-6383201 MsG0180000459.01.T01:CDS
CCATTGGCTATTCTTGCACC+TGG 0.390881 1:-6377612 MsG0180000459.01.T01:CDS
AAAATCAGCAATGTCGGTCT+TGG 0.394703 1:+6380656 None:intergenic
ACTACACGTCTCAGGAGAAT+TGG 0.396585 1:-6377692 MsG0180000459.01.T01:CDS
CGCCGCCACTGTTAAATTTG+TGG 0.405726 1:+6383515 None:intergenic
GTCCTTTCTCCGCCATGGCT+TGG 0.407600 1:+6383466 None:intergenic
AAGTGGATAGATTGCTTGGA+GGG 0.409011 1:-6380818 MsG0180000459.01.T01:CDS
AGGTCGTGGACGGATTATCT+TGG 0.416052 1:-6383303 MsG0180000459.01.T01:CDS
GAGAATTGGATGCGACACTT+TGG 0.419306 1:-6377678 MsG0180000459.01.T01:CDS
AGAGATGAAACGTCGTCGTT+TGG 0.424313 1:+6383675 None:intergenic
TTCCATGAACGAAGTGTTCA+AGG 0.426707 1:+6383715 None:intergenic
TAATTTGAATTACCATATCT+GGG 0.427257 1:+6383061 None:intergenic
ATGCTAAAGCCAAAGGCATA+TGG 0.427796 1:-6380713 MsG0180000459.01.T01:CDS
TTGGAAGTTGTTACTGGTAA+AGG 0.428929 1:-6383195 MsG0180000459.01.T01:CDS
TGTGAAATGAAGAAGAGTTT+CGG 0.429316 1:+6383763 None:intergenic
TCTTCCTTCTTCAGCTGGAC+CGG 0.429397 1:-6382626 MsG0180000459.01.T01:CDS
GGTGATTTACTCGGAATTTG+AGG 0.430629 1:-6382800 MsG0180000459.01.T01:CDS
AGGTGCATCCCATATGCCTT+TGG 0.432243 1:+6380704 None:intergenic
CGATGGAATTAGGGGCGAAA+TGG 0.432931 1:+6383640 None:intergenic
AGTGGTCAGACTTTCCGTTA+TGG 0.435886 1:-6383243 MsG0180000459.01.T01:CDS
GCTGAAGAAGGAAGACAAAC+CGG 0.448502 1:+6382634 None:intergenic
AATTATAGGTGAGGTGGATG+AGG 0.449429 1:-6382822 MsG0180000459.01.T01:intron
TTCGAACCCATCGGAATTGT+GGG 0.454639 1:+6382670 None:intergenic
GTTCGAACCCATCGGAATTG+TGG 0.455887 1:+6382669 None:intergenic
TAGAAAGTGGATAGATTGCT+TGG 0.458245 1:-6380822 MsG0180000459.01.T01:CDS
TTAAGCTTGTTCCGAGGTCG+TGG 0.462870 1:-6383317 MsG0180000459.01.T01:CDS
TCTTCAACAAGCCCCAGATA+TGG 0.463973 1:-6383073 MsG0180000459.01.T01:intron
AACAGTGGGTACACTAGAAT+GGG 0.464745 1:+6380588 None:intergenic
GGTCGTGGACGGATTATCTT+GGG 0.467250 1:-6383302 MsG0180000459.01.T01:CDS
ATTTATTCCACCACCACCTA+AGG 0.468688 1:-6377805 MsG0180000459.01.T01:CDS
CAACAGTGGGTACACTAGAA+TGG 0.469023 1:+6380587 None:intergenic
GGGCGAAATGGAAAGAAGAT+TGG 0.474103 1:+6383652 None:intergenic
TACTAAAGATGCAGAGTGGC+TGG 0.476282 1:-6382773 MsG0180000459.01.T01:CDS
GGCCAAGCCATGGCGGAGAA+AGG 0.478685 1:-6383468 MsG0180000459.01.T01:CDS
TTCAGTTAAAAGGGAAGCTA+CGG 0.483363 1:+6383790 None:intergenic
ATCCTCAAACATGGGGTTGG+TGG 0.488134 1:-6380612 MsG0180000459.01.T01:CDS
AGCTCTAAGCAATAGAGAAC+CGG 0.488364 1:+6382607 None:intergenic
TTATCAGTAGGTGGTCCCTT+AGG 0.488494 1:+6377789 None:intergenic
GACCACCAACCCCATGTTTG+AGG 0.489413 1:+6380610 None:intergenic
GGAGGGTTGAGATTTGTTGA+GGG 0.491332 1:-6380801 MsG0180000459.01.T01:CDS
GATTATCTTGGGTTGACGGT+GGG 0.491823 1:-6383291 MsG0180000459.01.T01:CDS
TGTTGAGGGAATAAAATTTG+AGG 0.496430 1:-6380787 MsG0180000459.01.T01:CDS
GATGAAACGTCGTCGTTTGG+TGG 0.497366 1:+6383678 None:intergenic
GGTGGTCCCTTAGGTGGTGG+TGG 0.502048 1:+6377798 None:intergenic
TCCATCGCTAGTAAAGACTT+TGG 0.502870 1:-6383624 MsG0180000459.01.T01:CDS
TCGATCTTCTGAAGTTAATA+CGG 0.504348 1:-6382560 MsG0180000459.01.T01:intron
CCACATCGGCGGTGGTGTAA+GGG 0.506838 1:+6383565 None:intergenic
GCCAAAGTCTTTACTAGCGA+TGG 0.507471 1:+6383623 None:intergenic
TCTTCCTCACTACACGTCTC+AGG 0.507862 1:-6377700 MsG0180000459.01.T01:CDS
TATCTTGGGTTGACGGTGGG+TGG 0.508422 1:-6383288 MsG0180000459.01.T01:CDS
ACAGTGGCGGCGCGTGGTAA+CGG 0.517231 1:-6383504 MsG0180000459.01.T01:CDS
TTGCCGTTTGAGGACCATAA+CGG 0.518469 1:+6383229 None:intergenic
GCTTGTTCCGAGGTCGTGGA+CGG 0.521292 1:-6383313 MsG0180000459.01.T01:CDS
ACCATTGTAGTAATTGGTTG+GGG 0.523199 1:+6377452 None:intergenic
GGTGGTGTAAGGGCGGAGTA+CGG 0.523423 1:+6383575 None:intergenic
TCAAGAAAATCCTCAAACAT+GGG 0.525014 1:-6380620 MsG0180000459.01.T01:CDS
TGCTAAAGCCAAAGGCATAT+GGG 0.525753 1:-6380712 MsG0180000459.01.T01:CDS
GTGATTAATTATAGGTGAGG+TGG 0.525879 1:-6382828 MsG0180000459.01.T01:intron
GACAAGTCCTTTCTCCGCCA+TGG 0.527704 1:+6383461 None:intergenic
AACAATGACGACCCTTGTAA+TGG 0.528629 1:-6382697 MsG0180000459.01.T01:CDS
TATTCAATTGTGCTACAACA+AGG 0.537041 1:-6377742 MsG0180000459.01.T01:CDS
TTTCCGTTATGGTCCTCAAA+CGG 0.538238 1:-6383232 MsG0180000459.01.T01:CDS
TCCTCAAACGGCAAACGTAA+CGG 0.539282 1:-6383220 MsG0180000459.01.T01:CDS
GTAAGGGCGGAGTACGGCGA+GGG 0.539751 1:+6383581 None:intergenic
GTAGGTGGTCCCTTAGGTGG+TGG 0.540886 1:+6377795 None:intergenic
TGTGCCACCAATTTATCAGT+AGG 0.542453 1:+6377777 None:intergenic
ATTGTGGGCCAACCATTACA+AGG 0.542464 1:+6382685 None:intergenic
GACGGATTATCTTGGGTTGA+CGG 0.542938 1:-6383295 MsG0180000459.01.T01:CDS
CGCCACTGTTAAATTTGTGG+TGG 0.542938 1:+6383518 None:intergenic
ACGTGTAAAGCGTGTGGAAG+AGG 0.543242 1:-6380736 MsG0180000459.01.T01:CDS
CTCCATCAACGGCCAAGCCA+TGG 0.544156 1:-6383478 MsG0180000459.01.T01:CDS
GAACCATTGTAGTAATTGGT+TGG 0.544245 1:+6377450 None:intergenic
ATTATAGGTGAGGTGGATGA+GGG 0.546580 1:-6382821 MsG0180000459.01.T01:intron
TCAGTAGGTGGTCCCTTAGG+TGG 0.547015 1:+6377792 None:intergenic
TGGTTGGCCCACAATTCCGA+TGG 0.547575 1:-6382677 MsG0180000459.01.T01:CDS
CGACATGCGAGCCACGGCGG+AGG 0.549400 1:-6383436 MsG0180000459.01.T01:CDS
AGATAATCCGTCCACGACCT+CGG 0.550163 1:+6383306 None:intergenic
ATGTAGAAAATGTTGCTGTC+TGG 0.552926 1:+6377843 None:intergenic
GAGTACGGCGAGGGGAGTGG+AGG 0.555436 1:+6383590 None:intergenic
TGGAGGGTTGAGATTTGTTG+AGG 0.555521 1:-6380802 MsG0180000459.01.T01:CDS
CACACGTCGACGTTTCCGGT+GGG 0.555761 1:-6383380 MsG0180000459.01.T01:CDS
GGATTATCTTGGGTTGACGG+TGG 0.555995 1:-6383292 MsG0180000459.01.T01:CDS
ATTCAATTGTGCTACAACAA+GGG 0.556005 1:-6377741 MsG0180000459.01.T01:CDS
TCCCCAACCAATTACTACAA+TGG 0.556720 1:-6377453 MsG0180000459.01.T01:three_prime_UTR
AGAACCGGTCCAGCTGAAGA+AGG 0.557947 1:+6382622 None:intergenic
AAAATTTGGTTCGAACCCAT+CGG 0.558165 1:+6382661 None:intergenic
AAAGAAACAACAAGATCGAT+GGG 0.558512 1:+6377475 None:intergenic
TAGGTGGTGGTGGAATAAAT+CGG 0.560506 1:+6377808 None:intergenic
CCGCCGTGGCTCGCATGTCG+AGG 0.560775 1:+6383439 None:intergenic
GAAAGAAACAACAAGATCGA+TGG 0.560783 1:+6377474 None:intergenic
CCCTTACACCACCGCCGATG+TGG 0.562433 1:-6383565 MsG0180000459.01.T01:CDS
CTGAAGAAGGAAGACAAACC+GGG 0.562836 1:+6382635 None:intergenic
AAAGTGGATAGATTGCTTGG+AGG 0.565909 1:-6380819 MsG0180000459.01.T01:CDS
ATGACGACCCTTGTAATGGT+TGG 0.566251 1:-6382693 MsG0180000459.01.T01:CDS
TCGACGTAGAGAAGTTGAAA+AGG 0.566784 1:+6383411 None:intergenic
GGATGATAGACACTCGGTAG+TGG 0.567626 1:-6377868 MsG0180000459.01.T01:CDS
ATCGCTAGTAAAGACTTTGG+CGG 0.568106 1:-6383621 MsG0180000459.01.T01:CDS
TTTCAACTTCTCTACGTCGA+CGG 0.568492 1:-6383408 MsG0180000459.01.T01:CDS
CCACACGTCGACGTTTCCGG+TGG 0.571833 1:-6383381 MsG0180000459.01.T01:CDS
CACCACAAATTTAACAGTGG+CGG 0.573395 1:-6383517 MsG0180000459.01.T01:CDS
AAAATCCTCAAACATGGGGT+TGG 0.574467 1:-6380615 MsG0180000459.01.T01:CDS
TTCAAGAAAATCCTCAAACA+TGG 0.574533 1:-6380621 MsG0180000459.01.T01:CDS
AATTTAACAGTGGCGGCGCG+TGG 0.576208 1:-6383510 MsG0180000459.01.T01:CDS
ACGATCAAAATCAGCAATGT+CGG 0.577104 1:+6380650 None:intergenic
GACACAAACATGTTCAACCA+TGG 0.577551 1:+6380678 None:intergenic
TTTATATATAGGATACGCAA+AGG 0.580837 1:+6377372 None:intergenic
TTCTTCCCATAATGCCCCAC+CGG 0.584444 1:+6383365 None:intergenic
GTGGATGAGGGTGATTTACT+CGG 0.585431 1:-6382809 MsG0180000459.01.T01:CDS
TTTATTCCACCACCACCTAA+GGG 0.590375 1:-6377804 MsG0180000459.01.T01:CDS
TTATCTAACGCCGGTGTCAG+TGG 0.591550 1:-6383261 MsG0180000459.01.T01:CDS
CTTACTTGCTTCGCAACAGT+GGG 0.592991 1:+6380574 None:intergenic
CCACCGGAAACGTCGACGTG+TGG 0.593175 1:+6383381 None:intergenic
AACATGTTCAACCATGGGTG+AGG 0.595226 1:+6380684 None:intergenic
TGAGGATGATGTGAAGTACA+TGG 0.595819 1:-6380769 MsG0180000459.01.T01:CDS
ACACGTCGACGTTTCCGGTG+GGG 0.596713 1:-6383379 MsG0180000459.01.T01:CDS
TATGGGATGCACCTCACCCA+TGG 0.601998 1:-6380695 MsG0180000459.01.T01:CDS
GAATTGGATGCGACACTTTG+GGG 0.604652 1:-6377676 MsG0180000459.01.T01:CDS
AATATGAAAACAAAATTACA+AGG 0.605619 1:+6377504 None:intergenic
TAAGGGCGGAGTACGGCGAG+GGG 0.607594 1:+6383582 None:intergenic
ACCACCTACTGATAAATTGG+TGG 0.607929 1:-6377781 MsG0180000459.01.T01:CDS
GGTTTGAGAAGTAAGTGAAG+TGG 0.609211 1:+6383838 None:intergenic
GCCACCAATTTATCAGTAGG+TGG 0.612550 1:+6377780 None:intergenic
ACACAAACATGTTCAACCAT+GGG 0.614296 1:+6380679 None:intergenic
AATTTGAATTACCATATCTG+GGG 0.615221 1:+6383062 None:intergenic
GAAAGTCTGACCACTGACAC+CGG 0.615663 1:+6383251 None:intergenic
ACTTACTTGCTTCGCAACAG+TGG 0.615748 1:+6380573 None:intergenic
TGTCCTCGACATGCGAGCCA+CGG 0.617094 1:-6383442 MsG0180000459.01.T01:CDS
GGTAACGGTCACTCCATCAA+CGG 0.617798 1:-6383489 MsG0180000459.01.T01:CDS
TGTAAGGGCGGAGTACGGCG+AGG 0.621289 1:+6383580 None:intergenic
GGTTGGCCCACAATTCCGAT+GGG 0.621310 1:-6382676 MsG0180000459.01.T01:CDS
GAAGAGGATGCTAAAGCCAA+AGG 0.626533 1:-6380720 MsG0180000459.01.T01:CDS
CAGGTGGGATGATAGACACT+CGG 0.631537 1:-6377874 MsG0180000459.01.T01:CDS
TTTGCTACGTGTAAAGCGTG+TGG 0.637512 1:-6380742 MsG0180000459.01.T01:CDS
CAAGAAAATCCTCAAACATG+GGG 0.637785 1:-6380619 MsG0180000459.01.T01:CDS
CATTGGCTATTCTTGCACCT+GGG 0.639117 1:-6377611 MsG0180000459.01.T01:CDS
TTCTCCTGAGACGTGTAGTG+AGG 0.643513 1:+6377696 None:intergenic
TTGAAAAGGCTCCTCCGCCG+TGG 0.646401 1:+6383425 None:intergenic
CATCGGCGGTGGTGTAAGGG+CGG 0.651775 1:+6383568 None:intergenic
TTTACTAGCGATGGAATTAG+GGG 0.652593 1:+6383632 None:intergenic
GGTGGAACTTTATCTAACGC+CGG 0.664301 1:-6383270 MsG0180000459.01.T01:CDS
CATCAACGGCCAAGCCATGG+CGG 0.679836 1:-6383475 MsG0180000459.01.T01:CDS
CCAGGTGCAAGAATAGCCAA+TGG 0.680263 1:+6377612 None:intergenic
CCTCGACATGCGAGCCACGG+CGG 0.681570 1:-6383439 MsG0180000459.01.T01:CDS
TTACGTGGAAGGGTTCGTTG+TGG 0.686031 1:-6382722 MsG0180000459.01.T01:CDS
TGGCTGGTGACACTACCAGA+AGG 0.701936 1:-6382757 MsG0180000459.01.T01:CDS
ATTAACTTCAGAAGATCGAG+CGG 0.709501 1:+6382564 None:intergenic
GTGACACTACCAGAAGGTGA+CGG 0.718693 1:-6382751 MsG0180000459.01.T01:CDS
TTGTGGGCCAACCATTACAA+GGG 0.722239 1:+6382686 None:intergenic
AACCACCACAAATTTAACAG+TGG 0.724117 1:-6383520 MsG0180000459.01.T01:CDS
ACTATACTAAAGATGCAGAG+TGG 0.735948 1:-6382777 MsG0180000459.01.T01:CDS
AAGAAACAACAAGATCGATG+GGG 0.737164 1:+6377476 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTTATATTAAAAA+AGG - Chr1:6381950-6381969 MsG0180000459.01.T01:intron 0.0%
!! AAAAAGATTAAAAAAACAAA+TGG + Chr1:6378637-6378656 None:intergenic 10.0%
!! AAAAGATTAAAAAAACAAAT+GGG + Chr1:6378636-6378655 None:intergenic 10.0%
!! AAAATTAATAAATAAGGATT+AGG - Chr1:6378863-6378882 MsG0180000459.01.T01:intron 10.0%
!! AAATTAATAAATAAGGATTA+GGG - Chr1:6378864-6378883 MsG0180000459.01.T01:intron 10.0%
!! AAATTTGTAATTATCTTAAT+TGG + Chr1:6382974-6382993 None:intergenic 10.0%
!! AATAAAATGCAATATATAAT+TGG - Chr1:6378721-6378740 MsG0180000459.01.T01:intron 10.0%
!! AATTGATTGATTAATAATTA+AGG - Chr1:6383217-6383236 MsG0180000459.01.T01:CDS 10.0%
!! ATAAAAAATACTATACATAT+AGG + Chr1:6381259-6381278 None:intergenic 10.0%
!! CTAATTAATATTATTTAAGT+TGG + Chr1:6383569-6383588 None:intergenic 10.0%
!! CTTAACAAAATTAATAAATA+AGG - Chr1:6378857-6378876 MsG0180000459.01.T01:intron 10.0%
!! TCTAAAAAAAAAAAAAATCA+TGG + Chr1:6379618-6379637 None:intergenic 10.0%
!!! AAAAATATTGATTTACAATA+TGG + Chr1:6383715-6383734 None:intergenic 10.0%
!!! AGAAAATATTTTAAAACATT+TGG + Chr1:6382106-6382125 None:intergenic 10.0%
!!! ATATTCGAAATTTTATATAT+AGG + Chr1:6383776-6383795 None:intergenic 10.0%
!!! ATATTGTAAATCAATATTTT+TGG - Chr1:6383714-6383733 MsG0180000459.01.T01:CDS 10.0%
!!! ATTTTTATATTAAAAAAGGT+GGG - Chr1:6381954-6381973 MsG0180000459.01.T01:intron 10.0%
!!! TATTGTAAATCAATATTTTT+GGG - Chr1:6383715-6383734 MsG0180000459.01.T01:CDS 10.0%
!!! TATTTTTATATTAAAAAAGG+TGG - Chr1:6381953-6381972 MsG0180000459.01.T01:intron 10.0%
!!! TTCTAAAAAAAAAAAAATCA+TGG + Chr1:6379470-6379489 None:intergenic 10.0%
!!! TTGTTATTATATATTGTATA+TGG - Chr1:6378240-6378259 MsG0180000459.01.T01:intron 10.0%
!!! TTTAAAATATTTTCTTGTTA+GGG - Chr1:6382111-6382130 MsG0180000459.01.T01:intron 10.0%
!!! TTTTAAAATATTTTCTTGTT+AGG - Chr1:6382110-6382129 MsG0180000459.01.T01:intron 10.0%
!!! TTTTCTTTTATAATATATTC+AGG + Chr1:6378817-6378836 None:intergenic 10.0%
!!! TTTTTAATACTTGAAAATTT+AGG - Chr1:6380658-6380677 MsG0180000459.01.T01:CDS 10.0%
!! AAAAAAATGCTAAAAAAATC+AGG + Chr1:6381307-6381326 None:intergenic 15.0%
!! AAAAAATGCTAAAAAAATCA+GGG + Chr1:6381306-6381325 None:intergenic 15.0%
!! AATATGAAAACAAAATTACA+AGG + Chr1:6383633-6383652 None:intergenic 15.0%
!! TATTAAAAATTATGAGACAA+TGG + Chr1:6380647-6380666 None:intergenic 15.0%
!! TGCTTCAAAAAAAATAAAAA+AGG - Chr1:6379011-6379030 MsG0180000459.01.T01:intron 15.0%
!! TTTGCTTCAAAAAAAAAAAA+AGG - Chr1:6378896-6378915 MsG0180000459.01.T01:intron 15.0%
!!! ATTGATTGTTGATATTTTAT+AGG - Chr1:6381374-6381393 MsG0180000459.01.T01:intron 15.0%
!!! ATTGTAAATCAATATTTTTG+GGG - Chr1:6383716-6383735 MsG0180000459.01.T01:CDS 15.0%
!!! ATTTTTAACTTCAACTTAAT+TGG + Chr1:6379654-6379673 None:intergenic 15.0%
!!! TTAAAATATTTTCTTGTTAG+GGG - Chr1:6382112-6382131 MsG0180000459.01.T01:intron 15.0%
!!! TTGATTTTGATTTTGATTTT+GGG - Chr1:6378283-6378302 MsG0180000459.01.T01:intron 15.0%
!!! TTTGATTTTGATTTTGATTT+TGG - Chr1:6378282-6378301 MsG0180000459.01.T01:intron 15.0%
!!! TTTTTTAGATGAAATTTGTT+AGG - Chr1:6379067-6379086 MsG0180000459.01.T01:intron 15.0%
!! AAAAAAATAAAAAAGGCAAG+AGG - Chr1:6379018-6379037 MsG0180000459.01.T01:intron 20.0%
!! AAAATGAAACCATTATTTAG+TGG - Chr1:6379669-6379688 MsG0180000459.01.T01:intron 20.0%
!! AAGATAGATAAAGTTGAAAA+AGG + Chr1:6381984-6382003 None:intergenic 20.0%
!! AATGTTCTAATAATGTAGAT+AGG + Chr1:6382592-6382611 None:intergenic 20.0%
!! ACTTACTAATAAAGGATAAA+GGG + Chr1:6382792-6382811 None:intergenic 20.0%
!! AGACTCAAAATTAATAAACA+AGG - Chr1:6379149-6379168 MsG0180000459.01.T01:intron 20.0%
!! ATAATTTGAATTACCATATC+TGG + Chr1:6378077-6378096 None:intergenic 20.0%
!! ATCAATATTAAAGTTGTACT+TGG + Chr1:6379434-6379453 None:intergenic 20.0%
!! ATGTTCTAATAATGTAGATA+GGG + Chr1:6382591-6382610 None:intergenic 20.0%
!! ATTGAATTTGAATTCCTATA+TGG - Chr1:6380072-6380091 MsG0180000459.01.T01:intron 20.0%
!! TAATTTGAATTACCATATCT+GGG + Chr1:6378076-6378095 None:intergenic 20.0%
!! TACTTACTAATAAAGGATAA+AGG + Chr1:6382793-6382812 None:intergenic 20.0%
!! TATCACTATATTACATAGAA+AGG - Chr1:6380609-6380628 MsG0180000459.01.T01:CDS 20.0%
!! TGAATACTACTTACTAATAA+AGG + Chr1:6382800-6382819 None:intergenic 20.0%
!!! AAAACAAAATTTTGATCCAT+TGG - Chr1:6383506-6383525 MsG0180000459.01.T01:CDS 20.0%
!!! AATTTTATAAATGCGTTAGT+TGG - Chr1:6380775-6380794 MsG0180000459.01.T01:CDS 20.0%
!!! ACTTACTTTTCATCATTTTA+AGG + Chr1:6383071-6383090 None:intergenic 20.0%
!!! AGTGAAAATCTTACTTTTTT+AGG + Chr1:6381461-6381480 None:intergenic 20.0%
!!! ATATATTTTTTTACCGTGAA+AGG - Chr1:6380730-6380749 MsG0180000459.01.T01:CDS 20.0%
!!! ATATTATTTAAGTTGGTTTC+TGG + Chr1:6383562-6383581 None:intergenic 20.0%
!!! ATTTTATAAATGCGTTAGTT+GGG - Chr1:6380776-6380795 MsG0180000459.01.T01:CDS 20.0%
!!! ATTTTTTGGTAACACTTTTT+AGG + Chr1:6381435-6381454 None:intergenic 20.0%
!!! GTATATTTGACTTTTTACTT+GGG + Chr1:6379718-6379737 None:intergenic 20.0%
!!! GTGAAAATCTTACTTTTTTA+GGG + Chr1:6381460-6381479 None:intergenic 20.0%
!!! TATATTTTTTTACCGTGAAA+GGG - Chr1:6380731-6380750 MsG0180000459.01.T01:CDS 20.0%
!!! TGATTTTGATTTTGATTTTG+GGG - Chr1:6378284-6378303 MsG0180000459.01.T01:intron 20.0%
!!! TGTTGTTTTTATGATTAATC+AGG - Chr1:6383241-6383260 MsG0180000459.01.T01:CDS 20.0%
!!! TTGTAAATCAATATTTTTGG+GGG - Chr1:6383717-6383736 MsG0180000459.01.T01:CDS 20.0%
!!! TTTGAATTTTTTTTTGCCAA+TGG - Chr1:6379891-6379910 MsG0180000459.01.T01:intron 20.0%
!!! TTTGTATTTTCTCTTGAAAT+GGG - Chr1:6382373-6382392 MsG0180000459.01.T01:intron 20.0%
!!! TTTTGTATTTTCTCTTGAAA+TGG - Chr1:6382372-6382391 MsG0180000459.01.T01:intron 20.0%
! AAAGGTTAATAAGCCAAAAT+GGG - Chr1:6381124-6381143 MsG0180000459.01.T01:intron 25.0%
! AATTTGAATTACCATATCTG+GGG + Chr1:6378075-6378094 None:intergenic 25.0%
! ACTAATCAAACATAATATGC+CGG + Chr1:6379306-6379325 None:intergenic 25.0%
! AGAATTGCAATCACAATTTA+GGG + Chr1:6383197-6383216 None:intergenic 25.0%
! AGGAACATAATGAAATAGTA+AGG + Chr1:6383051-6383070 None:intergenic 25.0%
! AGTGGTAGAAAAACAAATAT+AGG - Chr1:6379687-6379706 MsG0180000459.01.T01:intron 25.0%
! CAAAAAAAAAAAAAGGCAAG+AGG - Chr1:6378903-6378922 MsG0180000459.01.T01:intron 25.0%
! CAAGTAAGTTTAAATGAGTT+GGG - Chr1:6378180-6378199 MsG0180000459.01.T01:intron 25.0%
! CTATATGGTTAAGGTTAAAA+TGG - Chr1:6380087-6380106 MsG0180000459.01.T01:intron 25.0%
! CTTACTAATAAAGGATAAAG+GGG + Chr1:6382791-6382810 None:intergenic 25.0%
! GTAGAAAAACAAATATAGGT+GGG - Chr1:6379691-6379710 MsG0180000459.01.T01:intron 25.0%
! TACGGATATTAGTAATAGTT+TGG + Chr1:6379337-6379356 None:intergenic 25.0%
! TAGAATTGCAATCACAATTT+AGG + Chr1:6383198-6383217 None:intergenic 25.0%
! TGAGAAAAAACAGATAGAAA+AGG + Chr1:6381519-6381538 None:intergenic 25.0%
! TGTTCTAATAATGTAGATAG+GGG + Chr1:6382590-6382609 None:intergenic 25.0%
! TTAATAAATAAGGATTAGGG+TGG - Chr1:6378867-6378886 MsG0180000459.01.T01:intron 25.0%
! TTCAAGAGAAAATACAAAAC+CGG + Chr1:6382371-6382390 None:intergenic 25.0%
! TTTATATATAGGATACGCAA+AGG + Chr1:6383765-6383784 None:intergenic 25.0%
! TTTGAATTCCTATATGGTTA+AGG - Chr1:6380078-6380097 MsG0180000459.01.T01:intron 25.0%
!! AAACCTAATTTGCAAATGAA+CGG - Chr1:6379102-6379121 MsG0180000459.01.T01:intron 25.0%
!! ATATGGAGTAGTTTATGTTT+TGG - Chr1:6378257-6378276 MsG0180000459.01.T01:intron 25.0%
!! ATTCATATATTTTGCAACCA+AGG + Chr1:6380989-6381008 None:intergenic 25.0%
!! ATTTTATCATGATTATGACG+AGG - Chr1:6380843-6380862 MsG0180000459.01.T01:intron 25.0%
!! CTATTTTATGCTAATAGCTA+AGG + Chr1:6380048-6380067 None:intergenic 25.0%
!! GTTTTATGTTTGAAGAGTTT+GGG + Chr1:6377320-6377339 None:intergenic 25.0%
!! GTTTTTATGATTAATCAGGT+GGG - Chr1:6383245-6383264 MsG0180000459.01.T01:CDS 25.0%
!! GTTTTTCTACCACTAAATAA+TGG + Chr1:6379681-6379700 None:intergenic 25.0%
!! TGATTTCACAAATTTCTAGA+GGG + Chr1:6383143-6383162 None:intergenic 25.0%
!! TTGATTTCACAAATTTCTAG+AGG + Chr1:6383144-6383163 None:intergenic 25.0%
!!! AATTTTTTTTTGCCAATGGT+TGG - Chr1:6379895-6379914 MsG0180000459.01.T01:intron 25.0%
!!! ACTTTTTTAGGGCAATTTTT+TGG + Chr1:6381449-6381468 None:intergenic 25.0%
!!! AGTATGACTTATTTTACTCT+AGG - Chr1:6383093-6383112 MsG0180000459.01.T01:CDS 25.0%
!!! ATTTTGGGGTGATTAATTAT+AGG - Chr1:6378298-6378317 MsG0180000459.01.T01:intron 25.0%
!!! ATTTTTTTTTGCCAATGGTT+GGG - Chr1:6379896-6379915 MsG0180000459.01.T01:intron 25.0%
!!! CATTTTAACCTTAACCATAT+AGG + Chr1:6380089-6380108 None:intergenic 25.0%
!!! CGTATATTTGACTTTTTACT+TGG + Chr1:6379719-6379738 None:intergenic 25.0%
!!! GATCAAAATTTTGTTTTCTC+TGG + Chr1:6383503-6383522 None:intergenic 25.0%
!!! TAAAACGAGTAGTTTTGTAA+TGG - Chr1:6381343-6381362 MsG0180000459.01.T01:intron 25.0%
!!! TGTTTTTATGATTAATCAGG+TGG - Chr1:6383244-6383263 MsG0180000459.01.T01:CDS 25.0%
!!! TTCGGTTTTTTCAGTTAAAA+GGG + Chr1:6377356-6377375 None:intergenic 25.0%
!!! TTTCGGTTTTTTCAGTTAAA+AGG + Chr1:6377357-6377376 None:intergenic 25.0%
!!! TTTTTCTAAGGATTGGAATT+TGG - Chr1:6382465-6382484 MsG0180000459.01.T01:intron 25.0%
!!! TTTTTTAGATGGAAGTTGTT+AGG - Chr1:6378952-6378971 MsG0180000459.01.T01:intron 25.0%
AAAAAAAAAGGCAAGAGGAT+AGG - Chr1:6378908-6378927 MsG0180000459.01.T01:intron 30.0%
AAACCAATAATACTAGTAGC+AGG - Chr1:6382670-6382689 MsG0180000459.01.T01:CDS 30.0%
AAAGAAACAACAAGATCGAT+GGG + Chr1:6383662-6383681 None:intergenic 30.0%
AACCATTGTAGTAATTGGTT+GGG + Chr1:6383686-6383705 None:intergenic 30.0%
ACAAAGATTTGACATATGTC+CGG + Chr1:6378224-6378243 None:intergenic 30.0%
ACACTGAAGGAATATTATGT+AGG + Chr1:6382642-6382661 None:intergenic 30.0%
ACTAGTTGATTACTATCATC+AGG - Chr1:6381733-6381752 MsG0180000459.01.T01:intron 30.0%
AGATAACGTCACATATCATT+TGG - Chr1:6379818-6379837 MsG0180000459.01.T01:intron 30.0%
ATATCCTTGTCCATTCTTAT+TGG + Chr1:6382320-6382339 None:intergenic 30.0%
ATCTCAATAATCAGAGCAAA+TGG + Chr1:6380135-6380154 None:intergenic 30.0%
ATTCAATTGTGCTACAACAA+GGG - Chr1:6383393-6383412 MsG0180000459.01.T01:CDS 30.0%
CAAAAATAAAATCTCCCTTG+TGG - Chr1:6382413-6382432 MsG0180000459.01.T01:intron 30.0%
CAAATGAACGGGAAAATATT+AGG - Chr1:6379114-6379133 MsG0180000459.01.T01:intron 30.0%
CAACGTCAATTTGAAAATTC+CGG - Chr1:6382018-6382037 MsG0180000459.01.T01:intron 30.0%
CAAGAGGATAGGAATAAAAT+TGG - Chr1:6378919-6378938 MsG0180000459.01.T01:intron 30.0%
CAATACATGGTGAAGTATAT+GGG + Chr1:6381159-6381178 None:intergenic 30.0%
CCACTTTCTACAATATATCA+AGG + Chr1:6380302-6380321 None:intergenic 30.0%
CCTTGATATATTGTAGAAAG+TGG - Chr1:6380299-6380318 MsG0180000459.01.T01:intron 30.0%
CTAGTATATGGGAATTGTAA+AGG - Chr1:6379209-6379228 MsG0180000459.01.T01:intron 30.0%
CTAGTTGATTACTATCATCA+GGG - Chr1:6381734-6381753 MsG0180000459.01.T01:intron 30.0%
CTTCCATCTAAAAAAATGCA+TGG + Chr1:6378947-6378966 None:intergenic 30.0%
GAAAGGTTAATAAGCCAAAA+TGG - Chr1:6381123-6381142 MsG0180000459.01.T01:intron 30.0%
GAAGGAAATCTATAGTAATC+AGG - Chr1:6382134-6382153 MsG0180000459.01.T01:intron 30.0%
GAATATTATGTAGGAGGTTA+TGG + Chr1:6382633-6382652 None:intergenic 30.0%
GATAACGTCACATATCATTT+GGG - Chr1:6379819-6379838 MsG0180000459.01.T01:intron 30.0%
GCAAGTAAGTTTAAATGAGT+TGG - Chr1:6378179-6378198 MsG0180000459.01.T01:intron 30.0%
GGTAGAAAAACAAATATAGG+TGG - Chr1:6379690-6379709 MsG0180000459.01.T01:intron 30.0%
GTAAGCTATCATGTTTGTTT+GGG + Chr1:6377400-6377419 None:intergenic 30.0%
GTTCTAATAATGTAGATAGG+GGG + Chr1:6382589-6382608 None:intergenic 30.0%
TAATGTGTCAGAAAATCCAA+TGG + Chr1:6379954-6379973 None:intergenic 30.0%
TACTAAAAAGCTTGTGTTGT+TGG - Chr1:6379979-6379998 MsG0180000459.01.T01:intron 30.0%
TATCATTTGGGTATAAGTGT+TGG - Chr1:6379831-6379850 MsG0180000459.01.T01:intron 30.0%
TATTCAATTGTGCTACAACA+AGG - Chr1:6383392-6383411 MsG0180000459.01.T01:CDS 30.0%
TCAAGAAAATCCTCAAACAT+GGG - Chr1:6380514-6380533 MsG0180000459.01.T01:intron 30.0%
TCAAGAGAAAATACAAAACC+GGG + Chr1:6382370-6382389 None:intergenic 30.0%
TGATGAACCATTGTAGTAAT+TGG + Chr1:6383691-6383710 None:intergenic 30.0%
TGTGAAATGAAGAAGAGTTT+CGG + Chr1:6377374-6377393 None:intergenic 30.0%
TGTTGAGGGAATAAAATTTG+AGG - Chr1:6380347-6380366 MsG0180000459.01.T01:intron 30.0%
TTCAAGAAAATCCTCAAACA+TGG - Chr1:6380513-6380532 MsG0180000459.01.T01:intron 30.0%
TTCTTTACAATAAACCCGAA+CGG + Chr1:6378687-6378706 None:intergenic 30.0%
! AACCTAATTTGCAAATGAAC+GGG - Chr1:6379103-6379122 MsG0180000459.01.T01:intron 30.0%
! AAGGAGTGATAGTGAATAAT+AGG + Chr1:6381612-6381631 None:intergenic 30.0%
! AATATTTTCTTGTTAGGGGA+AGG - Chr1:6382116-6382135 MsG0180000459.01.T01:intron 30.0%
! ACTCATTCACATTTGATGAT+AGG + Chr1:6381914-6381933 None:intergenic 30.0%
! CGTTTTATGTTTGAAGAGTT+TGG + Chr1:6377321-6377340 None:intergenic 30.0%
! CTATAGTAATCAGGTTTTTC+CGG - Chr1:6382143-6382162 MsG0180000459.01.T01:intron 30.0%
! CTCATTCACATTTGATGATA+GGG + Chr1:6381913-6381932 None:intergenic 30.0%
! TAATATTGATTGACCTAGCT+TGG - Chr1:6379444-6379463 MsG0180000459.01.T01:intron 30.0%
! TTCTAGAGGGAAAATAAAAC+AGG + Chr1:6383130-6383149 None:intergenic 30.0%
! TTTTGCCTTGTCTAGTATAT+GGG - Chr1:6379198-6379217 MsG0180000459.01.T01:intron 30.0%
!! GTGCAATTAGCTTTGTTATA+TGG + Chr1:6381691-6381710 None:intergenic 30.0%
!! TCGATCTTCTGAAGTTAATA+CGG - Chr1:6378574-6378593 MsG0180000459.01.T01:intron 30.0%
!!! ATGACTTATTTTACTCTAGG+TGG - Chr1:6383096-6383115 MsG0180000459.01.T01:CDS 30.0%
!!! TATTGATGCTGCTTTTTCTA+AGG - Chr1:6382453-6382472 MsG0180000459.01.T01:intron 30.0%
!!! TCCAGAAAATGATGGTTTTT+TGG + Chr1:6380195-6380214 None:intergenic 30.0%
!!! TTTTTTTTTGCCAATGGTTG+GGG - Chr1:6379897-6379916 MsG0180000459.01.T01:intron 30.0%
AAAAAAATCATGGCCAAGCT+AGG + Chr1:6379460-6379479 None:intergenic 35.0%
AACCACCACAAATTTAACAG+TGG - Chr1:6377614-6377633 MsG0180000459.01.T01:CDS 35.0%
AAGAAACAACAAGATCGATG+GGG + Chr1:6383661-6383680 None:intergenic 35.0%
AAGAGAGATATGGACCAAAA+GGG - Chr1:6380938-6380957 MsG0180000459.01.T01:intron 35.0%
AAGGATATTTATTCGCCAAC+CGG - Chr1:6382332-6382351 MsG0180000459.01.T01:intron 35.0%
AAGGCAAAAGAACACGAAAA+TGG + Chr1:6379187-6379206 None:intergenic 35.0%
AATGCATGTGGTCAATTCAT+GGG + Chr1:6382562-6382581 None:intergenic 35.0%
ACACAAACATGTTCAACCAT+GGG + Chr1:6380458-6380477 None:intergenic 35.0%
ACATGTACGAAGTTGAGATA+TGG - Chr1:6379753-6379772 MsG0180000459.01.T01:intron 35.0%
ACATTGAAGGACTATTACGT+AGG + Chr1:6382710-6382729 None:intergenic 35.0%
ACCATTGTAGTAATTGGTTG+GGG + Chr1:6383685-6383704 None:intergenic 35.0%
ACGACACTAACTTAGACATA+CGG + Chr1:6379355-6379374 None:intergenic 35.0%
ACGATCAAAATCAGCAATGT+CGG + Chr1:6380487-6380506 None:intergenic 35.0%
ACTATACTAAAGATGCAGAG+TGG - Chr1:6378357-6378376 MsG0180000459.01.T01:intron 35.0%
ACTTAAACCAGTTGCAGATT+GGG + Chr1:6382530-6382549 None:intergenic 35.0%
ATGGTGAAGTATATGGGAAA+TGG + Chr1:6381153-6381172 None:intergenic 35.0%
ATGTAGAAAATGTTGCTGTC+TGG + Chr1:6383294-6383313 None:intergenic 35.0%
ATTAACTTCAGAAGATCGAG+CGG + Chr1:6378573-6378592 None:intergenic 35.0%
CAAGAAAATCCTCAAACATG+GGG - Chr1:6380515-6380534 MsG0180000459.01.T01:intron 35.0%
CAATTCCCATATACTAGACA+AGG + Chr1:6379206-6379225 None:intergenic 35.0%
CACATAAAGCAAGAGAGATA+TGG - Chr1:6380928-6380947 MsG0180000459.01.T01:intron 35.0%
CCAATACATGGTGAAGTATA+TGG + Chr1:6381160-6381179 None:intergenic 35.0%
CCATATACTTCACCATGTAT+TGG - Chr1:6381157-6381176 MsG0180000459.01.T01:intron 35.0%
CTACAGATTCCAGAAAATGA+TGG + Chr1:6380203-6380222 None:intergenic 35.0%
CTGAAGGAATATTATGTAGG+AGG + Chr1:6382639-6382658 None:intergenic 35.0%
CTTTACTAGCGATGGAATTA+GGG + Chr1:6377506-6377525 None:intergenic 35.0%
GAAAGAAACAACAAGATCGA+TGG + Chr1:6383663-6383682 None:intergenic 35.0%
GAACCATTGTAGTAATTGGT+TGG + Chr1:6383687-6383706 None:intergenic 35.0%
GATCCTGCTACTAGTATTAT+TGG + Chr1:6382676-6382695 None:intergenic 35.0%
GATCGATGAAAACGAGATAT+TGG - Chr1:6382249-6382268 MsG0180000459.01.T01:intron 35.0%
GGGAAAATAAAACAGGATCT+TGG + Chr1:6383123-6383142 None:intergenic 35.0%
GGTAAGCTATCATGTTTGTT+TGG + Chr1:6377401-6377420 None:intergenic 35.0%
GTGATTAATTATAGGTGAGG+TGG - Chr1:6378306-6378325 MsG0180000459.01.T01:intron 35.0%
TAAAAACTAGCTACCACTAG+TGG - Chr1:6380875-6380894 MsG0180000459.01.T01:intron 35.0%
TAAATTCTCTACGTCAACTG+TGG - Chr1:6382904-6382923 MsG0180000459.01.T01:intron 35.0%
TAATGAAAACGCCACATGAA+AGG - Chr1:6382863-6382882 MsG0180000459.01.T01:intron 35.0%
TAATGCATGTGGTCAATTCA+TGG + Chr1:6382563-6382582 None:intergenic 35.0%
TAGAAAGTGGATAGATTGCT+TGG - Chr1:6380312-6380331 MsG0180000459.01.T01:intron 35.0%
TATAAATGCGTTAGTTGGGT+TGG - Chr1:6380780-6380799 MsG0180000459.01.T01:CDS 35.0%
TCAGGCATAGAAAACATGTT+TGG - Chr1:6379242-6379261 MsG0180000459.01.T01:intron 35.0%
TCTTTACTAGCGATGGAATT+AGG + Chr1:6377507-6377526 None:intergenic 35.0%
TGGTGAAGTATATGGGAAAT+GGG + Chr1:6381152-6381171 None:intergenic 35.0%
TGTTCATATGTTACCACTAG+TGG + Chr1:6380891-6380910 None:intergenic 35.0%
TTCAGTTAAAAGGGAAGCTA+CGG + Chr1:6377347-6377366 None:intergenic 35.0%
TTCCAACAACGTATCTTTCA+TGG - Chr1:6382285-6382304 MsG0180000459.01.T01:intron 35.0%
TTCCCGTTCATTTGCAAATT+AGG + Chr1:6379108-6379127 None:intergenic 35.0%
TTGGAAGTTGTTACTGGTAA+AGG - Chr1:6377939-6377958 MsG0180000459.01.T01:intron 35.0%
TTGTTATATGGTTGTCCTAC+CGG + Chr1:6381679-6381698 None:intergenic 35.0%
TTTACTAGCGATGGAATTAG+GGG + Chr1:6377505-6377524 None:intergenic 35.0%
TTTGCCAATAAGAATGGACA+AGG - Chr1:6382313-6382332 MsG0180000459.01.T01:intron 35.0%
! AAAATTTGGTTCGAACCCAT+CGG + Chr1:6378476-6378495 None:intergenic 35.0%
! AAGGACCACCAATTTTAAAC+GGG - Chr1:6381047-6381066 MsG0180000459.01.T01:intron 35.0%
! CAAGGACCACCAATTTTAAA+CGG - Chr1:6381046-6381065 MsG0180000459.01.T01:intron 35.0%
! CTTTTGCCTTGTCTAGTATA+TGG - Chr1:6379197-6379216 MsG0180000459.01.T01:intron 35.0%
! GCAAAGTACAGTGTCTTATT+CGG + Chr1:6380015-6380034 None:intergenic 35.0%
! GCCAAAAAACCATCATTTTC+TGG - Chr1:6380191-6380210 MsG0180000459.01.T01:intron 35.0%
! GTCAGTTTTGCCAATAAGAA+TGG - Chr1:6382307-6382326 MsG0180000459.01.T01:intron 35.0%
! TCCGAAATTTTACATGACAC+CGG - Chr1:6379284-6379303 MsG0180000459.01.T01:intron 35.0%
! TTCGAACCAAATTTTCAACC+CGG - Chr1:6378481-6378500 MsG0180000459.01.T01:intron 35.0%
! TTTTACGGCTTTTACCACAT+CGG + Chr1:6377586-6377605 None:intergenic 35.0%
! TTTTCCGGAGAGTTTCTTTT+TGG - Chr1:6382158-6382177 MsG0180000459.01.T01:intron 35.0%
!! GATTTTGACATGAACTGCTA+AGG - Chr1:6380809-6380828 MsG0180000459.01.T01:CDS 35.0%
!! TTTCACCCTAATTTGCTTCA+AGG - Chr1:6381028-6381047 MsG0180000459.01.T01:intron 35.0%
!!! ATGCTGCTTTTTCTAAGGAT+TGG - Chr1:6382458-6382477 MsG0180000459.01.T01:intron 35.0%
!!! CTGGAAAATATTTTTTGCCC+AGG + Chr1:6383543-6383562 None:intergenic 35.0%
!!! GATGGTTTTTTGGCCATTTA+CGG + Chr1:6380185-6380204 None:intergenic 35.0%
!!! GTGCCATGCATTTTTTTAGA+TGG - Chr1:6378941-6378960 MsG0180000459.01.T01:intron 35.0%
!!! TTGGGTATAAGTGTTGGTTT+TGG - Chr1:6379837-6379856 MsG0180000459.01.T01:intron 35.0%
!!! TTTTTTTACCGTGAAAGGGA+AGG - Chr1:6380735-6380754 MsG0180000459.01.T01:CDS 35.0%
!!! TTTTTTTTGCCAATGGTTGG+GGG - Chr1:6379898-6379917 MsG0180000459.01.T01:intron 35.0%
AAAATCAGCAATGTCGGTCT+TGG + Chr1:6380481-6380500 None:intergenic 40.0%
AAAATCCTCAAACATGGGGT+TGG - Chr1:6380519-6380538 MsG0180000459.01.T01:intron 40.0%
AAAGTGGATAGATTGCTTGG+AGG - Chr1:6380315-6380334 MsG0180000459.01.T01:intron 40.0%
AACAATGACGACCCTTGTAA+TGG - Chr1:6378437-6378456 MsG0180000459.01.T01:intron 40.0%
AACAGTGGGTACACTAGAAT+GGG + Chr1:6380549-6380568 None:intergenic 40.0%
AAGTGGATAGATTGCTTGGA+GGG - Chr1:6380316-6380335 MsG0180000459.01.T01:intron 40.0%
AATTATAGGTGAGGTGGATG+AGG - Chr1:6378312-6378331 MsG0180000459.01.T01:intron 40.0%
ACACAACTATGACACCAAAG+TGG + Chr1:6381762-6381781 None:intergenic 40.0%
ACATTTGATATGCTCAGACG+CGG - Chr1:6378133-6378152 MsG0180000459.01.T01:intron 40.0%
ACCACCTACTGATAAATTGG+TGG - Chr1:6383353-6383372 MsG0180000459.01.T01:CDS 40.0%
ACGAAGTTGAGATATGGAAG+AGG - Chr1:6379759-6379778 MsG0180000459.01.T01:intron 40.0%
ACGGAATTGGAAGTTGTTAC+TGG - Chr1:6377933-6377952 MsG0180000459.01.T01:intron 40.0%
AGAATTGGATGCGACACTTT+GGG - Chr1:6383457-6383476 MsG0180000459.01.T01:CDS 40.0%
AGAGAGATATGGACCAAAAG+GGG - Chr1:6380939-6380958 MsG0180000459.01.T01:intron 40.0%
ATAGCTTTCCTTCCCTTTCA+CGG + Chr1:6380746-6380765 None:intergenic 40.0%
ATAGGGGGAATTAATGCATG+TGG + Chr1:6382574-6382593 None:intergenic 40.0%
ATCGCTAGTAAAGACTTTGG+CGG - Chr1:6377513-6377532 MsG0180000459.01.T01:three_prime_UTR 40.0%
ATGAAAGGCTGCAAAAGTCA+AGG - Chr1:6382878-6382897 MsG0180000459.01.T01:intron 40.0%
ATTAGAACATTGCATCGCGT+AGG - Chr1:6382601-6382620 MsG0180000459.01.T01:CDS 40.0%
ATTAGGGTGAAAGAGGCAAA+TGG + Chr1:6381020-6381039 None:intergenic 40.0%
ATTATAGGTGAGGTGGATGA+GGG - Chr1:6378313-6378332 MsG0180000459.01.T01:intron 40.0%
ATTTATTCCACCACCACCTA+AGG - Chr1:6383329-6383348 MsG0180000459.01.T01:CDS 40.0%
CAAGAGAGATATGGACCAAA+AGG - Chr1:6380937-6380956 MsG0180000459.01.T01:intron 40.0%
CACCACAAATTTAACAGTGG+CGG - Chr1:6377617-6377636 MsG0180000459.01.T01:CDS 40.0%
CATCAATATCCCTGTGTATG+TGG + Chr1:6382441-6382460 None:intergenic 40.0%
CCAACAAGCTGAGATAAAGA+AGG + Chr1:6381224-6381243 None:intergenic 40.0%
CCTTCTTTATCTCAGCTTGT+TGG - Chr1:6381221-6381240 MsG0180000459.01.T01:intron 40.0%
GAAGCAAATTAGGGTGAAAG+AGG + Chr1:6381027-6381046 None:intergenic 40.0%
GACACAAACATGTTCAACCA+TGG + Chr1:6380459-6380478 None:intergenic 40.0%
GACCATGAAAGATACGTTGT+TGG + Chr1:6382290-6382309 None:intergenic 40.0%
GACTTAAACCAGTTGCAGAT+TGG + Chr1:6382531-6382550 None:intergenic 40.0%
GCACTTGTGTTGAACTAGAA+AGG - Chr1:6381106-6381125 MsG0180000459.01.T01:intron 40.0%
GGGGTGATTAATTATAGGTG+AGG - Chr1:6378303-6378322 MsG0180000459.01.T01:intron 40.0%
GGTCGTAATGTATCTTCCAT+TGG - Chr1:6379935-6379954 MsG0180000459.01.T01:intron 40.0%
GGTGAAGTATATGGGAAATG+GGG + Chr1:6381151-6381170 None:intergenic 40.0%
GGTGATTTACTCGGAATTTG+AGG - Chr1:6378334-6378353 MsG0180000459.01.T01:intron 40.0%
GGTTTAAATCGAGACACTGA+AGG + Chr1:6382655-6382674 None:intergenic 40.0%
GTGGTCCTTGAAGCAAATTA+GGG + Chr1:6381036-6381055 None:intergenic 40.0%
GTTACCATACGACCAATACA+TGG + Chr1:6381172-6381191 None:intergenic 40.0%
TAATCAAAACCGTCACCTTC+TGG + Chr1:6378395-6378414 None:intergenic 40.0%
TACCTTGAACACTTCGTTCA+TGG - Chr1:6377417-6377436 MsG0180000459.01.T01:three_prime_UTR 40.0%
TCCACCAAAAAGAAACTCTC+CGG + Chr1:6382165-6382184 None:intergenic 40.0%
TCCATCGCTAGTAAAGACTT+TGG - Chr1:6377510-6377529 MsG0180000459.01.T01:three_prime_UTR 40.0%
TCCCCAACCAATTACTACAA+TGG - Chr1:6383681-6383700 MsG0180000459.01.T01:CDS 40.0%
TCGACGTAGAGAAGTTGAAA+AGG + Chr1:6377726-6377745 None:intergenic 40.0%
TCTCAACTTCGTACATGTGT+AGG + Chr1:6379751-6379770 None:intergenic 40.0%
TGAAAGGCTGCAAAAGTCAA+GGG - Chr1:6382879-6382898 MsG0180000459.01.T01:intron 40.0%
TGAGGATGATGTGAAGTACA+TGG - Chr1:6380365-6380384 MsG0180000459.01.T01:intron 40.0%
TGTGCCACCAATTTATCAGT+AGG + Chr1:6383360-6383379 None:intergenic 40.0%
TTGAAGGACTATTACGTAGG+AGG + Chr1:6382707-6382726 None:intergenic 40.0%
TTGACATGAACTGCTAAGGT+TGG - Chr1:6380813-6380832 MsG0180000459.01.T01:CDS 40.0%
TTTATTCCACCACCACCTAA+GGG - Chr1:6383330-6383349 MsG0180000459.01.T01:CDS 40.0%
TTTCAACTTCTCTACGTCGA+CGG - Chr1:6377726-6377745 MsG0180000459.01.T01:CDS 40.0%
TTTCCGTTATGGTCCTCAAA+CGG - Chr1:6377902-6377921 MsG0180000459.01.T01:intron 40.0%
! AGGACCACCAATTTTAAACG+GGG - Chr1:6381048-6381067 MsG0180000459.01.T01:intron 40.0%
! ATGCTAAAGCCAAAGGCATA+TGG - Chr1:6380421-6380440 MsG0180000459.01.T01:intron 40.0%
! CTCGTTTTCATCGATCACAA+AGG + Chr1:6382245-6382264 None:intergenic 40.0%
! GAATTTGGTTCCCTCTTCAA+GGG - Chr1:6382480-6382499 MsG0180000459.01.T01:intron 40.0%
! GACAAACCGGGTTGAAAATT+TGG + Chr1:6378490-6378509 None:intergenic 40.0%
! TGCTAAAGCCAAAGGCATAT+GGG - Chr1:6380422-6380441 MsG0180000459.01.T01:intron 40.0%
! TTACCCACCCCGTTTAAAAT+TGG + Chr1:6381058-6381077 None:intergenic 40.0%
! TTCACCATGTATTGGTCGTA+TGG - Chr1:6381165-6381184 MsG0180000459.01.T01:intron 40.0%
! TTCCATGAACGAAGTGTTCA+AGG + Chr1:6377422-6377441 None:intergenic 40.0%
! TTGAGATCTTGCTGACGTTT+TGG - Chr1:6380148-6380167 MsG0180000459.01.T01:intron 40.0%
!! AGCTCTAAGCAATAGAGAAC+CGG + Chr1:6378530-6378549 None:intergenic 40.0%
!! CGAATTTTAAGCTTGTTCCG+AGG - Chr1:6377811-6377830 MsG0180000459.01.T01:CDS 40.0%
!! CTCAGCTTGTTGGTACTATA+TGG - Chr1:6381231-6381250 MsG0180000459.01.T01:intron 40.0%
!! GCCGGTGTCATGTAAAATTT+CGG + Chr1:6379288-6379307 None:intergenic 40.0%
!! GGTCTGAGTTGATACATTGA+AGG + Chr1:6382723-6382742 None:intergenic 40.0%
!! TAGGTGGTGGTGGAATAAAT+CGG + Chr1:6383329-6383348 None:intergenic 40.0%
!!! ACGGTTTTGATTACGTGGAA+GGG - Chr1:6378402-6378421 MsG0180000459.01.T01:intron 40.0%
!!! CTCTTTTTTGCTTCACTTGG+TGG - Chr1:6377999-6378018 MsG0180000459.01.T01:intron 40.0%
!!! GAGCTCTTTTTTGCTTCACT+TGG - Chr1:6377996-6378015 MsG0180000459.01.T01:intron 40.0%
AACATGTTCAACCATGGGTG+AGG + Chr1:6380453-6380472 None:intergenic 45.0%
AACCTACATTCCTTTCCGGT+AGG - Chr1:6381661-6381680 MsG0180000459.01.T01:intron 45.0%
AATGGCACTCAAGCATGTCA+TGG - Chr1:6381878-6381897 MsG0180000459.01.T01:intron 45.0%
ACCACTAAGTTACTCGTTCG+AGG - Chr1:6382740-6382759 MsG0180000459.01.T01:CDS 45.0%
ACCTCGAACGAGTAACTTAG+TGG + Chr1:6382744-6382763 None:intergenic 45.0%
ACTACACGTCTCAGGAGAAT+TGG - Chr1:6383442-6383461 MsG0180000459.01.T01:CDS 45.0%
ACTTACTTGCTTCGCAACAG+TGG + Chr1:6380564-6380583 None:intergenic 45.0%
AGAGATGAAACGTCGTCGTT+TGG + Chr1:6377462-6377481 None:intergenic 45.0%
AGTGGTCAGACTTTCCGTTA+TGG - Chr1:6377891-6377910 MsG0180000459.01.T01:intron 45.0%
AGTTGTACTTAGCAGCTTCC+AGG + Chr1:6379571-6379590 None:intergenic 45.0%
ATATGGTTGTCCTACCGGAA+AGG + Chr1:6381674-6381693 None:intergenic 45.0%
ATGACATGCTTGAGTGCCAT+TGG + Chr1:6381879-6381898 None:intergenic 45.0%
ATGACGACCCTTGTAATGGT+TGG - Chr1:6378441-6378460 MsG0180000459.01.T01:intron 45.0%
ATTGTGGGCCAACCATTACA+AGG + Chr1:6378452-6378471 None:intergenic 45.0%
CAACAGTGGGTACACTAGAA+TGG + Chr1:6380550-6380569 None:intergenic 45.0%
CAATGACGCAATATTGACCC+TGG - Chr1:6379402-6379421 MsG0180000459.01.T01:intron 45.0%
CACCCATCAACACACATCAA+CGG - Chr1:6381833-6381852 MsG0180000459.01.T01:intron 45.0%
CGCCACTGTTAAATTTGTGG+TGG + Chr1:6377619-6377638 None:intergenic 45.0%
CTATCATCAGGGTTCCACTT+TGG - Chr1:6381745-6381764 MsG0180000459.01.T01:intron 45.0%
CTGAAGAAGGAAGACAAACC+GGG + Chr1:6378502-6378521 None:intergenic 45.0%
CTGTGTATGTGGAACCACAA+GGG + Chr1:6382430-6382449 None:intergenic 45.0%
CTTACTTGCTTCGCAACAGT+GGG + Chr1:6380563-6380582 None:intergenic 45.0%
CTTGTGGTTCCACATACACA+GGG - Chr1:6382429-6382448 MsG0180000459.01.T01:intron 45.0%
GAAAGGCTGCAAAAGTCAAG+GGG - Chr1:6382880-6382899 MsG0180000459.01.T01:intron 45.0%
GAAGAGGATGCTAAAGCCAA+AGG - Chr1:6380414-6380433 MsG0180000459.01.T01:intron 45.0%
GAATTGGATGCGACACTTTG+GGG - Chr1:6383458-6383477 MsG0180000459.01.T01:CDS 45.0%
GAGAATTGGATGCGACACTT+TGG - Chr1:6383456-6383475 MsG0180000459.01.T01:CDS 45.0%
GCCAAAGTCTTTACTAGCGA+TGG + Chr1:6377514-6377533 None:intergenic 45.0%
GCCACCAATTTATCAGTAGG+TGG + Chr1:6383357-6383376 None:intergenic 45.0%
GCTGAAGAAGGAAGACAAAC+CGG + Chr1:6378503-6378522 None:intergenic 45.0%
GGGACCACCTACTGATAAAT+TGG - Chr1:6383350-6383369 MsG0180000459.01.T01:CDS 45.0%
GGGCGAAATGGAAAGAAGAT+TGG + Chr1:6377485-6377504 None:intergenic 45.0%
GGTGGAACTTTATCTAACGC+CGG - Chr1:6377864-6377883 MsG0180000459.01.T01:CDS 45.0%
GGTGGTCCTTGAAGCAAATT+AGG + Chr1:6381037-6381056 None:intergenic 45.0%
GTGCCATGCACAGAAAAAAG+TGG + Chr1:6382046-6382065 None:intergenic 45.0%
GTGGATGAGGGTGATTTACT+CGG - Chr1:6378325-6378344 MsG0180000459.01.T01:intron 45.0%
GTGTCATAGTTGTGTGCCAT+TGG - Chr1:6381767-6381786 MsG0180000459.01.T01:intron 45.0%
GTTGTACTTAGCAGCTTCCA+GGG + Chr1:6379570-6379589 None:intergenic 45.0%
GTTTGTCTTCCTTCTTCAGC+TGG - Chr1:6378503-6378522 MsG0180000459.01.T01:intron 45.0%
TAAACGGGGTGGGTAAGATT+TGG - Chr1:6381062-6381081 MsG0180000459.01.T01:intron 45.0%
TACTAAAGATGCAGAGTGGC+TGG - Chr1:6378361-6378380 MsG0180000459.01.T01:intron 45.0%
TAGGTTCCCAGTTGCCTTAT+TGG + Chr1:6381647-6381666 None:intergenic 45.0%
TCCTCAAACGGCAAACGTAA+CGG - Chr1:6377914-6377933 MsG0180000459.01.T01:intron 45.0%
TCTTCAACAAGCCCCAGATA+TGG - Chr1:6378061-6378080 MsG0180000459.01.T01:intron 45.0%
TGCACAGAAAAAAGTGGCTC+CGG + Chr1:6382040-6382059 None:intergenic 45.0%
TGGGAACCTACATTCCTTTC+CGG - Chr1:6381657-6381676 MsG0180000459.01.T01:intron 45.0%
TTATCAGTAGGTGGTCCCTT+AGG + Chr1:6383348-6383367 None:intergenic 45.0%
TTCGAACCCATCGGAATTGT+GGG + Chr1:6378467-6378486 None:intergenic 45.0%
TTGCAACCAAGGTCACAGTT+GGG + Chr1:6380978-6380997 None:intergenic 45.0%
TTGGCCATTTACGGAACTGT+GGG + Chr1:6380176-6380195 None:intergenic 45.0%
TTGGGGGAAAACTGACTACA+CGG - Chr1:6379914-6379933 MsG0180000459.01.T01:intron 45.0%
TTGTGGGCCAACCATTACAA+GGG + Chr1:6378451-6378470 None:intergenic 45.0%
TTTGCAACCAAGGTCACAGT+TGG + Chr1:6380979-6380998 None:intergenic 45.0%
TTTGCTACGTGTAAAGCGTG+TGG - Chr1:6380392-6380411 MsG0180000459.01.T01:intron 45.0%
TTTGGCCATTTACGGAACTG+TGG + Chr1:6380177-6380196 None:intergenic 45.0%
! AACGGCAAACGTAACGGAAT+TGG - Chr1:6377920-6377939 MsG0180000459.01.T01:intron 45.0%
! ACCACCAATTTTAAACGGGG+TGG - Chr1:6381051-6381070 MsG0180000459.01.T01:intron 45.0%
! CATTGGCTATTCTTGCACCT+GGG - Chr1:6383523-6383542 MsG0180000459.01.T01:CDS 45.0%
! CCACCAATTTTAAACGGGGT+GGG - Chr1:6381052-6381071 MsG0180000459.01.T01:intron 45.0%
! GACTTTTGCAGCCTTTCATG+TGG + Chr1:6382877-6382896 None:intergenic 45.0%
! GGAATTTGGTTCCCTCTTCA+AGG - Chr1:6382479-6382498 MsG0180000459.01.T01:intron 45.0%
! TCAGCTGTTTCATCACACTG+CGG - Chr1:6381193-6381212 MsG0180000459.01.T01:intron 45.0%
! TCCGGAGAGTTTCTTTTTGG+TGG - Chr1:6382161-6382180 MsG0180000459.01.T01:intron 45.0%
! TGATGTGTGTTGATGGGTGT+GGG + Chr1:6381832-6381851 None:intergenic 45.0%
! TGCGACACTTTGGGGATAAA+TGG - Chr1:6383466-6383485 MsG0180000459.01.T01:CDS 45.0%
! TTGATGTGTGTTGATGGGTG+TGG + Chr1:6381833-6381852 None:intergenic 45.0%
! TTGCCGTTTGAGGACCATAA+CGG + Chr1:6377908-6377927 None:intergenic 45.0%
! TTTGCTTCACTTGGTGGTCT+TGG - Chr1:6378005-6378024 MsG0180000459.01.T01:intron 45.0%
! TTTTTGATCCGTGCTCCGTT+CGG - Chr1:6378669-6378688 MsG0180000459.01.T01:intron 45.0%
!! GACGGATTATCTTGGGTTGA+CGG - Chr1:6377839-6377858 MsG0180000459.01.T01:CDS 45.0%
!! GATTATCTTGGGTTGACGGT+GGG - Chr1:6377843-6377862 MsG0180000459.01.T01:CDS 45.0%
!! GGAGGGTTGAGATTTGTTGA+GGG - Chr1:6380333-6380352 MsG0180000459.01.T01:intron 45.0%
!! GGCTTGTTGAAGAACGATTC+TGG + Chr1:6378054-6378073 None:intergenic 45.0%
!! GTTTTCTATGCCTGACTCGT+CGG + Chr1:6379237-6379256 None:intergenic 45.0%
!! TGGAGGGTTGAGATTTGTTG+AGG - Chr1:6380332-6380351 MsG0180000459.01.T01:intron 45.0%
!!! AGGTGACGGTTTTGATTACG+TGG - Chr1:6378397-6378416 MsG0180000459.01.T01:intron 45.0%
!!! GACGGTTTTGATTACGTGGA+AGG - Chr1:6378401-6378420 MsG0180000459.01.T01:intron 45.0%
!!! GAGCCACTTTTTTCTGTGCA+TGG - Chr1:6382040-6382059 MsG0180000459.01.T01:intron 45.0%
!! ATATATTATAAAAGAAAATT+AGG - Chr1:6378819-6378838 MsG0180000459.01.T01:intron 5.0%
!!! AAATGATTTTATTAAAAAAT+TGG + Chr1:6381494-6381513 None:intergenic 5.0%
!!! AATGATTTTATTAAAAAATT+GGG + Chr1:6381493-6381512 None:intergenic 5.0%
!!! TTTTTTTTTTTAGAAAAAAT+TGG - Chr1:6379624-6379643 MsG0180000459.01.T01:intron 5.0%
AACCAGTTGCAGATTGGGCA+AGG + Chr1:6382525-6382544 None:intergenic 50.0%
AACCGGATTACAGTGACACC+CGG - Chr1:6382349-6382368 MsG0180000459.01.T01:intron 50.0%
ACGTGTAAAGCGTGTGGAAG+AGG - Chr1:6380398-6380417 MsG0180000459.01.T01:intron 50.0%
AGATAATCCGTCCACGACCT+CGG + Chr1:6377831-6377850 None:intergenic 50.0%
AGGTGCATCCCATATGCCTT+TGG + Chr1:6380433-6380452 None:intergenic 50.0%
AGTTGCAGATTGGGCAAGGT+GGG + Chr1:6382521-6382540 None:intergenic 50.0%
AGTTGTACTTGGCAGCTTCC+AGG + Chr1:6379423-6379442 None:intergenic 50.0%
ATCAACACACATCAACGGCC+AGG - Chr1:6381838-6381857 MsG0180000459.01.T01:intron 50.0%
ATCCTCAAACATGGGGTTGG+TGG - Chr1:6380522-6380541 MsG0180000459.01.T01:intron 50.0%
CAATAAACCCGAACGGAGCA+CGG + Chr1:6378680-6378699 None:intergenic 50.0%
CAGGTGGGATGATAGACACT+CGG - Chr1:6383260-6383279 MsG0180000459.01.T01:CDS 50.0%
CCAGGTGCAAGAATAGCCAA+TGG + Chr1:6383525-6383544 None:intergenic 50.0%
CCTGTGTATGTGGAACCACA+AGG + Chr1:6382431-6382450 None:intergenic 50.0%
CCTTGTGGTTCCACATACAC+AGG - Chr1:6382428-6382447 MsG0180000459.01.T01:intron 50.0%
CGATGGAATTAGGGGCGAAA+TGG + Chr1:6377497-6377516 None:intergenic 50.0%
CGCCGCCACTGTTAAATTTG+TGG + Chr1:6377622-6377641 None:intergenic 50.0%
GAAAGTCTGACCACTGACAC+CGG + Chr1:6377886-6377905 None:intergenic 50.0%
GATGAAACGTCGTCGTTTGG+TGG + Chr1:6377459-6377478 None:intergenic 50.0%
GATTGCACCAATGGCACCAA+TGG - Chr1:6381860-6381879 MsG0180000459.01.T01:intron 50.0%
GCAGTGTGATGAAACAGCTG+AGG + Chr1:6381194-6381213 None:intergenic 50.0%
GGATGATAGACACTCGGTAG+TGG - Chr1:6383266-6383285 MsG0180000459.01.T01:CDS 50.0%
GTCCTACCGGAAAGGAATGT+AGG + Chr1:6381666-6381685 None:intergenic 50.0%
GTGAAAGAGGCAAATGGCTC+AGG + Chr1:6381014-6381033 None:intergenic 50.0%
GTGACACTACCAGAAGGTGA+CGG - Chr1:6378383-6378402 MsG0180000459.01.T01:intron 50.0%
GTGGGTAAGATTTGGAGGGT+GGG - Chr1:6381070-6381089 MsG0180000459.01.T01:intron 50.0%
GTGTGTGATGTGTGTGTGTG+TGG + Chr1:6381804-6381823 None:intergenic 50.0%
GTTCGAACCCATCGGAATTG+TGG + Chr1:6378468-6378487 None:intergenic 50.0%
GTTGTACTTGGCAGCTTCCA+GGG + Chr1:6379422-6379441 None:intergenic 50.0%
TATCACTCCTTGCCTGTGGT+TGG - Chr1:6381621-6381640 MsG0180000459.01.T01:intron 50.0%
TCACAGTTGGGTGTTCCTAG+TGG + Chr1:6380966-6380985 None:intergenic 50.0%
TCACTATCACTCCTTGCCTG+TGG - Chr1:6381617-6381636 MsG0180000459.01.T01:intron 50.0%
TCTTCCTCACTACACGTCTC+AGG - Chr1:6383434-6383453 MsG0180000459.01.T01:CDS 50.0%
TCTTCCTTCTTCAGCTGGAC+CGG - Chr1:6378508-6378527 MsG0180000459.01.T01:intron 50.0%
TGGCCATTTACGGAACTGTG+GGG + Chr1:6380175-6380194 None:intergenic 50.0%
TGGCCGTTGATGTGTGTTGA+TGG + Chr1:6381839-6381858 None:intergenic 50.0%
TGTAAAGGATCCGACGAGTC+AGG - Chr1:6379224-6379243 MsG0180000459.01.T01:intron 50.0%
TGTGATGTGTGTGTGTGTGG+TGG + Chr1:6381801-6381820 None:intergenic 50.0%
TTACGTGGAAGGGTTCGTTG+TGG - Chr1:6378412-6378431 MsG0180000459.01.T01:intron 50.0%
TTATTGGCCAACCACAGGCA+AGG + Chr1:6381631-6381650 None:intergenic 50.0%
TTCTCCTGAGACGTGTAGTG+AGG + Chr1:6383441-6383460 None:intergenic 50.0%
TTCTTCCCATAATGCCCCAC+CGG + Chr1:6377772-6377791 None:intergenic 50.0%
! CCATTGGCTATTCTTGCACC+TGG - Chr1:6383522-6383541 MsG0180000459.01.T01:CDS 50.0%
! CCCACCCCGTTTAAAATTGG+TGG + Chr1:6381055-6381074 None:intergenic 50.0%
! CTTGGTGGTCTTGGTCAGTT+TGG - Chr1:6378014-6378033 MsG0180000459.01.T01:intron 50.0%
! GATGTGTGTTGATGGGTGTG+GGG + Chr1:6381831-6381850 None:intergenic 50.0%
! GGCCGTTGATGTGTGTTGAT+GGG + Chr1:6381838-6381857 None:intergenic 50.0%
! GGTAACGGTCACTCCATCAA+CGG - Chr1:6377645-6377664 MsG0180000459.01.T01:CDS 50.0%
! GGTTGGCCAATAAGGCAACT+GGG - Chr1:6381638-6381657 MsG0180000459.01.T01:intron 50.0%
! GTCAGTTTTCCCCCAACCAT+TGG + Chr1:6379910-6379929 None:intergenic 50.0%
! TACGGCTTTTACCACATCGG+CGG + Chr1:6377583-6377602 None:intergenic 50.0%
! TCCGTTACGTTTGCCGTTTG+AGG + Chr1:6377918-6377937 None:intergenic 50.0%
! TGGGAAATGGGGTCCCATTT+TGG + Chr1:6381140-6381159 None:intergenic 50.0%
! TGGTTGGCCAATAAGGCAAC+TGG - Chr1:6381637-6381656 MsG0180000459.01.T01:intron 50.0%
! TGTGGTGGAGATGACACCAA+TGG + Chr1:6381786-6381805 None:intergenic 50.0%
! TTAAGCTTGTTCCGAGGTCG+TGG - Chr1:6377817-6377836 MsG0180000459.01.T01:CDS 50.0%
! TTATCTAACGCCGGTGTCAG+TGG - Chr1:6377873-6377892 MsG0180000459.01.T01:CDS 50.0%
! TTGCCTGTGGTTGGCCAATA+AGG - Chr1:6381630-6381649 MsG0180000459.01.T01:intron 50.0%
! TTGCCTTATTGGCCAACCAC+AGG + Chr1:6381636-6381655 None:intergenic 50.0%
! TTTTGATCCGTGCTCCGTTC+GGG - Chr1:6378670-6378689 MsG0180000459.01.T01:intron 50.0%
!! AACCGGGTGTCACTGTAATC+CGG + Chr1:6382354-6382373 None:intergenic 50.0%
!! AGGTCGTGGACGGATTATCT+TGG - Chr1:6377831-6377850 MsG0180000459.01.T01:CDS 50.0%
!! GGATTATCTTGGGTTGACGG+TGG - Chr1:6377842-6377861 MsG0180000459.01.T01:CDS 50.0%
!! GGTCGTGGACGGATTATCTT+GGG - Chr1:6377832-6377851 MsG0180000459.01.T01:CDS 50.0%
!! TGTTCCTAGTGGACCCCTTT+TGG + Chr1:6380955-6380974 None:intergenic 50.0%
!! TTGAGTGCCATTGGTGCCAT+TGG + Chr1:6381870-6381889 None:intergenic 50.0%
!!! GGTGGTTGCTGCTGCTTTTA+CGG + Chr1:6377601-6377620 None:intergenic 50.0%
AACGGCCAGGATTGCACCAA+TGG - Chr1:6381851-6381870 MsG0180000459.01.T01:intron 55.0%
AATTTAACAGTGGCGGCGCG+TGG - Chr1:6377624-6377643 MsG0180000459.01.T01:CDS 55.0%
ACGGGGTGGGTAAGATTTGG+AGG - Chr1:6381065-6381084 MsG0180000459.01.T01:intron 55.0%
AGAACCGGTCCAGCTGAAGA+AGG + Chr1:6378515-6378534 None:intergenic 55.0%
CACCTTGCCCAATCTGCAAC+TGG - Chr1:6382520-6382539 MsG0180000459.01.T01:intron 55.0%
CAGTTGCAGATTGGGCAAGG+TGG + Chr1:6382522-6382541 None:intergenic 55.0%
CGGGGTGGGTAAGATTTGGA+GGG - Chr1:6381066-6381085 MsG0180000459.01.T01:intron 55.0%
GACAAGTCCTTTCTCCGCCA+TGG + Chr1:6377676-6377695 None:intergenic 55.0%
GACCACCAACCCCATGTTTG+AGG + Chr1:6380527-6380546 None:intergenic 55.0%
GCTCAGAGTTCGCAAGAGTC+CGG - Chr1:6378202-6378221 MsG0180000459.01.T01:intron 55.0%
GGAACACCCAACTGTGACCT+TGG - Chr1:6380969-6380988 MsG0180000459.01.T01:intron 55.0%
GGTCCCCACAGTTCCGTAAA+TGG - Chr1:6380169-6380188 MsG0180000459.01.T01:intron 55.0%
GGTGGGTAAGATTTGGAGGG+TGG - Chr1:6381069-6381088 MsG0180000459.01.T01:intron 55.0%
GTTCCACACGTCGACGTTTC+CGG - Chr1:6377750-6377769 MsG0180000459.01.T01:CDS 55.0%
GTTGCAGATTGGGCAAGGTG+GGG + Chr1:6382520-6382539 None:intergenic 55.0%
TATGGGATGCACCTCACCCA+TGG - Chr1:6380439-6380458 MsG0180000459.01.T01:intron 55.0%
TCAGTAGGTGGTCCCTTAGG+TGG + Chr1:6383345-6383364 None:intergenic 55.0%
TGGACCAAAAGGGGTCCACT+AGG - Chr1:6380948-6380967 MsG0180000459.01.T01:intron 55.0%
TGGCTGGTGACACTACCAGA+AGG - Chr1:6378377-6378396 MsG0180000459.01.T01:intron 55.0%
TTGCAGATTGGGCAAGGTGG+GGG + Chr1:6382519-6382538 None:intergenic 55.0%
! ACGTTTCCGGTGGGGCATTA+TGG - Chr1:6377763-6377782 MsG0180000459.01.T01:CDS 55.0%
! CGTTTCCGGTGGGGCATTAT+GGG - Chr1:6377764-6377783 MsG0180000459.01.T01:CDS 55.0%
! GGTTGGCCCACAATTCCGAT+GGG - Chr1:6378458-6378477 MsG0180000459.01.T01:intron 55.0%
! TGGTTGGCCCACAATTCCGA+TGG - Chr1:6378457-6378476 MsG0180000459.01.T01:intron 55.0%
!! GGGTGTCACTGTAATCCGGT+TGG + Chr1:6382350-6382369 None:intergenic 55.0%
!! TATCTTGGGTTGACGGTGGG+TGG - Chr1:6377846-6377865 MsG0180000459.01.T01:CDS 55.0%
!! TGGTGCCATTGGTGCAATCC+TGG + Chr1:6381859-6381878 None:intergenic 55.0%
ACACGTCGACGTTTCCGGTG+GGG - Chr1:6377755-6377774 MsG0180000459.01.T01:CDS 60.0%
ACCACATCGGCGGTGGTGTA+AGG + Chr1:6377573-6377592 None:intergenic 60.0%
ATTGGGCAAGGTGGGGGAGA+GGG + Chr1:6382513-6382532 None:intergenic 60.0%
CACACGTCGACGTTTCCGGT+GGG - Chr1:6377754-6377773 MsG0180000459.01.T01:CDS 60.0%
CATCAACGGCCAAGCCATGG+CGG - Chr1:6377659-6377678 MsG0180000459.01.T01:CDS 60.0%
CCACATCGGCGGTGGTGTAA+GGG + Chr1:6377572-6377591 None:intergenic 60.0%
CTCCATCAACGGCCAAGCCA+TGG - Chr1:6377656-6377675 MsG0180000459.01.T01:CDS 60.0%
GCTTGTTCCGAGGTCGTGGA+CGG - Chr1:6377821-6377840 MsG0180000459.01.T01:CDS 60.0%
GGTGGTGTAAGGGCGGAGTA+CGG + Chr1:6377562-6377581 None:intergenic 60.0%
GTAGGTGGTCCCTTAGGTGG+TGG + Chr1:6383342-6383361 None:intergenic 60.0%
GTCCTTTCTCCGCCATGGCT+TGG + Chr1:6377671-6377690 None:intergenic 60.0%
TGTCCTCGACATGCGAGCCA+CGG - Chr1:6377692-6377711 MsG0180000459.01.T01:CDS 60.0%
TTGAAAAGGCTCCTCCGCCG+TGG + Chr1:6377712-6377731 None:intergenic 60.0%
! GGCTTTTACCACATCGGCGG+TGG + Chr1:6377580-6377599 None:intergenic 60.0%
ACAGTGGCGGCGCGTGGTAA+CGG - Chr1:6377630-6377649 MsG0180000459.01.T01:CDS 65.0%
AGGGGAGGGGACCCTTGAAG+AGG + Chr1:6382494-6382513 None:intergenic 65.0%
CATCGGCGGTGGTGTAAGGG+CGG + Chr1:6377569-6377588 None:intergenic 65.0%
CCACACGTCGACGTTTCCGG+TGG - Chr1:6377753-6377772 MsG0180000459.01.T01:CDS 65.0%
CCACCGGAAACGTCGACGTG+TGG + Chr1:6377756-6377775 None:intergenic 65.0%
CCCTTACACCACCGCCGATG+TGG - Chr1:6377569-6377588 MsG0180000459.01.T01:exon 65.0%
GATTGGGCAAGGTGGGGGAG+AGG + Chr1:6382514-6382533 None:intergenic 65.0%
GGGGAGGGGACCCTTGAAGA+GGG + Chr1:6382493-6382512 None:intergenic 65.0%
GTAAGGGCGGAGTACGGCGA+GGG + Chr1:6377556-6377575 None:intergenic 65.0%
TAAGGGCGGAGTACGGCGAG+GGG + Chr1:6377555-6377574 None:intergenic 65.0%
TGTAAGGGCGGAGTACGGCG+AGG + Chr1:6377557-6377576 None:intergenic 65.0%
TTGGGCAAGGTGGGGGAGAG+GGG + Chr1:6382512-6382531 None:intergenic 65.0%
! CGCCATGGCTTGGCCGTTGA+TGG + Chr1:6377661-6377680 None:intergenic 65.0%
! GGCCAAGCCATGGCGGAGAA+AGG - Chr1:6377666-6377685 MsG0180000459.01.T01:CDS 65.0%
! GGTGGTCCCTTAGGTGGTGG+TGG + Chr1:6383339-6383358 None:intergenic 65.0%
CAAGGTGGGGGAGAGGGGAG+GGG + Chr1:6382507-6382526 None:intergenic 70.0%
CCTCGACATGCGAGCCACGG+CGG - Chr1:6377695-6377714 MsG0180000459.01.T01:CDS 70.0%
GAGTACGGCGAGGGGAGTGG+AGG + Chr1:6377547-6377566 None:intergenic 70.0%
GCAAGGTGGGGGAGAGGGGA+GGG + Chr1:6382508-6382527 None:intergenic 70.0%
CCGCCGTGGCTCGCATGTCG+AGG + Chr1:6377698-6377717 None:intergenic 75.0%
CGACATGCGAGCCACGGCGG+AGG - Chr1:6377698-6377717 MsG0180000459.01.T01:CDS 75.0%
GCGGAGTACGGCGAGGGGAG+TGG + Chr1:6377550-6377569 None:intergenic 75.0%
GGCAAGGTGGGGGAGAGGGG+AGG + Chr1:6382509-6382528 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr1 gene 6377298 6383858 6377298 ID=MsG0180000459.01;Name=MsG0180000459.01
Chr1 mRNA 6377298 6383858 6377298 ID=MsG0180000459.01.T01;Parent=MsG0180000459.01;Name=MsG0180000459.01.T01;_AED=0.38;_eAED=0.38;_QI=110|1|1|1|1|1|4|280|509
Chr1 exon 6383074 6383858 6383074 ID=MsG0180000459.01.T01:exon:27853;Parent=MsG0180000459.01.T01
Chr1 exon 6382561 6382836 6382561 ID=MsG0180000459.01.T01:exon:27854;Parent=MsG0180000459.01.T01
Chr1 exon 6380579 6380841 6380579 ID=MsG0180000459.01.T01:exon:27855;Parent=MsG0180000459.01.T01
Chr1 exon 6377298 6377893 6377298 ID=MsG0180000459.01.T01:exon:27856;Parent=MsG0180000459.01.T01
Chr1 five_prime_UTR 6383749 6383858 6383749 ID=MsG0180000459.01.T01:five_prime_utr;Parent=MsG0180000459.01.T01
Chr1 CDS 6383074 6383748 6383074 ID=MsG0180000459.01.T01:cds;Parent=MsG0180000459.01.T01
Chr1 CDS 6382561 6382836 6382561 ID=MsG0180000459.01.T01:cds;Parent=MsG0180000459.01.T01
Chr1 CDS 6380579 6380841 6380579 ID=MsG0180000459.01.T01:cds;Parent=MsG0180000459.01.T01
Chr1 CDS 6377578 6377893 6377578 ID=MsG0180000459.01.T01:cds;Parent=MsG0180000459.01.T01
Chr1 three_prime_UTR 6377298 6377577 6377298 ID=MsG0180000459.01.T01:three_prime_utr;Parent=MsG0180000459.01.T01
Gene Sequence

>MsG0180000459.01.T01

ATGATAGCTTACCTTGAACACTTCGTTCATGGAAACGACACAGAATCACCACCAAACGACGACGTTTCATCTCTCCAATCTTCTTTCCATTTCGCCCCTAATTCCATCGCTAGTAAAGACTTTGGCGGCATGAAATCCTCCACTCCCCTCGCCGTACTCCGCCCTTACACCACCGCCGATGTGGTAAAAGCCGTAAAAGCAGCAGCAACCACCACAAATTTAACAGTGGCGGCGCGTGGTAACGGTCACTCCATCAACGGCCAAGCCATGGCGGAGAAAGGACTTGTCCTCGACATGCGAGCCACGGCGGAGGAGCCTTTTCAACTTCTCTACGTCGACGGTGTTCCACACGTCGACGTTTCCGGTGGGGCATTATGGGAAGAAGTGTTGAAACGCTGCGTTTCGAATTTTAAGCTTGTTCCGAGGTCGTGGACGGATTATCTTGGGTTGACGGTGGGTGGAACTTTATCTAACGCCGGTGTCAGTGGTCAGACTTTCCGTTATGGTCCTCAAACGGCAAACGTAACGGAATTGGAAGTTGTTACTGGTAAAGGTGATAGTTTTGTTTGTAATGAAAATCAAAATTCTGAGCTCTTTTTTGCTTCACTTGGTGGTCTTGGTCAGTTTGGTGTCATCACTAGAGCCAGAATCGTTCTTCAACAAGCCCCAGATATGGTGAGGTGGATGAGGGTGATTTACTCGGAATTTGAGGACTATACTAAAGATGCAGAGTGGCTGGTGACACTACCAGAAGGTGACGGTTTTGATTACGTGGAAGGGTTCGTTGTGGCTAACAATGACGACCCTTGTAATGGTTGGCCCACAATTCCGATGGGTTCGAACCAAATTTTCAACCCGGTTTGTCTTCCTTCTTCAGCTGGACCGGTTCTCTATTGCTTAGAGCTTGCTCTTCATTATCGTAAAACCGCTCGATCTTCTGAAGTTAATACGAAAGTGGATAGATTGCTTGGAGGGTTGAGATTTGTTGAGGGAATAAAATTTGAGGATGATGTGAAGTACATGGATTTTTTGCTACGTGTAAAGCGTGTGGAAGAGGATGCTAAAGCCAAAGGCATATGGGATGCACCTCACCCATGGTTGAACATGTTTGTGTCCAAGACCGACATTGCTGATTTTGATCGTGAAGTGTTCAAGAAAATCCTCAAACATGGGGTTGGTGGTCCCATTCTAGTGTACCCACTGTTGCGAAGCAAGTGGGATGATAGACACTCGGTAGTGGTGCCAGACAGCAACATTTTCTACATAATAGCATTACTCCGATTTATTCCACCACCACCTAAGGGACCACCTACTGATAAATTGGTGGCACAAAACAATGCAATTATTCAATTGTGCTACAACAAGGGATTTGATTTCAAGTTATATCTTCCTCACTACACGTCTCAGGAGAATTGGATGCGACACTTTGGGGATAAATGGACTAGATTTGTCCAGAGAAAACAAAATTTTGATCCATTGGCTATTCTTGCACCTGGGCAAAAAATATTTTCCAGAAACCAACTTAAATAA
Protein sequence

>MsG0180000459.01.T01

MIAYLEHFVHGNDTESPPNDDVSSLQSSFHFAPNSIASKDFGGMKSSTPLAVLRPYTTADVVKAVKAAATTTNLTVAARGNGHSINGQAMAEKGLVLDMRATAEEPFQLLYVDGVPHVDVSGGALWEEVLKRCVSNFKLVPRSWTDYLGLTVGGTLSNAGVSGQTFRYGPQTANVTELEVVTGKGDSFVCNENQNSELFFASLGGLGQFGVITRARIVLQQAPDMVRWMRVIYSEFEDYTKDAEWLVTLPEGDGFDYVEGFVVANNDDPCNGWPTIPMGSNQIFNPVCLPSSAGPVLYCLELALHYRKTARSSEVNTKVDRLLGGLRFVEGIKFEDDVKYMDFLLRVKRVEEDAKAKGIWDAPHPWLNMFVSKTDIADFDREVFKKILKHGVGGPILVYPLLRSKWDDRHSVVVPDSNIFYIIALLRFIPPPPKGPPTDKLVAQNNAIIQLCYNKGFDFKLYLPHYTSQENWMRHFGDKWTRFVQRKQNFDPLAILAPGQKIFSRNQLK*