AlfalfaGEDB | MsG0880046456.01

M. sativa cultivar ZhongmuNo.1 / MsG0880046456.01

KEGG: K09422
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880046456.01.T01	XP_013441833.1	97.573	206	5	0	1	206	117	322	1.30E-142	411

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880046456.01.T01	P81392	37.436	195	71	10	24	197	143	307	1.30E-15	77

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880046456.01.T01	A0A072TFY2	97.573	206	5	0	1	206	117	322	6.21e-143	411

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048273.01	MsG0880046456.01	0.810609	1.058759e-50	6.411137e-48
MsG0080048274.01	MsG0880046456.01	0.807811	4.211374e-50	2.368549e-47
MsG0080048845.01	MsG0880046456.01	0.810985	8.776891e-51	5.369168e-48
MsG0080048909.01	MsG0880046456.01	0.852840	3.545101e-61	7.506773e-58
MsG0080048969.01	MsG0880046456.01	0.854992	8.504028e-62	1.934403e-58
MsG0080049016.01	MsG0880046456.01	0.878466	2.744970e-69	1.435003e-65
MsG0080049018.01	MsG0880046456.01	0.831131	1.985806e-55	2.135426e-52
MsG0180000017.01	MsG0880046456.01	0.803021	4.253238e-49	2.114461e-46
MsG0180000120.01	MsG0880046456.01	0.842244	2.911534e-58	4.387430e-55
MsG0180000127.01	MsG0880046456.01	0.829933	3.901236e-55	4.050849e-52
MsG0180000128.01	MsG0880046456.01	0.828151	1.054085e-54	1.039066e-51
MsG0180000325.01	MsG0880046456.01	0.814453	1.529067e-51	1.026403e-48
MsG0180000502.01	MsG0880046456.01	0.844807	6.014082e-59	9.823423e-56
MsG0180001249.01	MsG0880046456.01	0.846062	2.749052e-59	4.674657e-56
MsG0180001367.01	MsG0880046456.01	0.800315	1.526677e-48	7.086764e-46
MsG0180001371.01	MsG0880046456.01	0.811437	7.002869e-51	4.334903e-48
MsG0180001685.01	MsG0880046456.01	0.803871	2.834023e-49	1.440186e-46
MsG0180001873.01	MsG0880046456.01	0.822810	1.940824e-53	1.641781e-50
MsG0180001907.01	MsG0880046456.01	0.837275	5.720697e-57	7.393266e-54
MsG0880044105.01	MsG0880046456.01	0.821606	3.692456e-53	3.018094e-50
MsG0880044312.01	MsG0880046456.01	0.812801	3.531519e-51	2.266778e-48
MsG0880044333.01	MsG0880046456.01	0.806472	8.091021e-50	4.395476e-47
MsG0880044488.01	MsG0880046456.01	0.803225	3.858189e-49	1.928229e-46
MsG0880044538.01	MsG0880046456.01	0.804729	1.878191e-49	9.757728e-47
MsG0880044558.01	MsG0880046456.01	0.855996	4.336627e-62	1.019930e-58
MsG0880044636.01	MsG0880046456.01	0.870084	1.906188e-66	7.320897e-63
MsG0880044727.01	MsG0880046456.01	0.823638	1.243536e-53	1.076858e-50
MsG0880044884.01	MsG0880046456.01	0.825573	4.354795e-54	3.984583e-51
MsG0880045073.01	MsG0880046456.01	0.836183	1.086203e-56	1.358623e-53
MsG0880045150.01	MsG0880046456.01	0.841093	5.854452e-58	8.509565e-55
MsG0880045151.01	MsG0880046456.01	0.814532	1.468247e-51	9.877260e-49
MsG0880045170.01	MsG0880046456.01	0.825078	5.702705e-54	5.145246e-51
MsG0880045252.01	MsG0880046456.01	0.815979	7.003527e-52	4.900669e-49
MsG0880045261.01	MsG0880046456.01	0.869517	2.918088e-66	1.098478e-62
MsG0880045283.01	MsG0880046456.01	0.887307	1.600338e-72	1.183781e-68
MsG0880045409.01	MsG0880046456.01	0.815201	1.043723e-51	7.148915e-49
MsG0880045412.01	MsG0880046456.01	0.870147	1.818049e-66	6.998086e-63
MsG0880045709.01	MsG0880046456.01	0.805190	1.504655e-49	7.909771e-47
MsG0880045755.01	MsG0880046456.01	0.826902	2.101688e-54	1.997580e-51
MsG0880045772.01	MsG0880046456.01	0.819377	1.198974e-52	9.210068e-50
MsG0880045899.01	MsG0880046456.01	0.845828	3.182713e-59	5.371838e-56
MsG0880046024.01	MsG0880046456.01	0.829315	5.515011e-55	5.625273e-52
MsG0880046025.01	MsG0880046456.01	0.822420	2.391641e-53	2.000880e-50
MsG0880046048.01	MsG0880046456.01	0.828387	9.250520e-55	9.181325e-52
MsG0880046160.01	MsG0880046456.01	0.809081	2.256541e-50	1.312318e-47
MsG0880046227.01	MsG0880046456.01	-0.804520	2.076669e-49	1.072957e-46
MsG0880046252.01	MsG0880046456.01	0.800408	1.461542e-48	6.800316e-46
MsG0880046288.01	MsG0880046456.01	0.901987	1.536144e-78	2.128859e-74
MsG0880046406.01	MsG0880046456.01	0.821354	4.221969e-53	3.426761e-50
MsG0880046456.01	MsG0880046574.01	0.860095	2.621886e-63	7.084099e-60
MsG0880046456.01	MsG0880046584.01	0.847149	1.388215e-59	2.444864e-56
MsG0880046456.01	MsG0880046639.01	0.844423	7.631664e-59	1.231475e-55
MsG0880046456.01	MsG0880046735.01	0.855988	4.360058e-62	1.025160e-58
MsG0880046456.01	MsG0880046856.01	0.843644	1.234338e-58	1.943999e-55
MsG0880046456.01	MsG0880046866.01	0.812326	4.484079e-51	2.842610e-48
MsG0880046456.01	MsG0880046968.01	0.851580	8.088314e-61	1.644567e-57
MsG0880046456.01	MsG0880046969.01	0.836330	9.969318e-57	1.252438e-53
MsG0880046456.01	MsG0880047107.01	0.827704	1.350348e-54	1.313716e-51
MsG0880046456.01	MsG0880047112.01	0.805893	1.071424e-49	5.735083e-47
MsG0880046456.01	MsG0880047156.01	0.808046	3.754845e-50	2.124812e-47
MsG0880046456.01	MsG0880047157.01	0.842894	1.956171e-58	3.008459e-55
MsG0880046456.01	MsG0880047160.01	0.802232	6.184818e-49	3.013772e-46
MsG0880046456.01	MsG0880047161.01	0.844027	9.749823e-59	1.554003e-55
MsG0880046456.01	MsG0880047251.01	0.834117	3.608145e-56	4.240762e-53
MsG0880046456.01	MsG0880047406.01	0.812852	3.441452e-51	2.211991e-48
MsG0880046456.01	MsG0880047460.01	-0.802005	6.888808e-49	3.337394e-46
MsG0880046456.01	MsG0880047540.01	0.807629	4.605278e-50	2.577787e-47
MsG0880046456.01	MsG0880047605.01	0.820251	7.569624e-53	5.958518e-50
MsG0880046456.01	MsG0880047660.01	0.824061	9.898420e-54	8.673719e-51
MsG0880046456.01	MsG0880047669.01	0.824644	7.220567e-54	6.434418e-51
MsG0180002902.01	MsG0880046456.01	0.814943	1.191094e-51	8.101388e-49
MsG0180002982.01	MsG0880046456.01	0.820403	6.988762e-53	5.524660e-50
MsG0180003268.01	MsG0880046456.01	0.811675	6.217951e-51	3.872800e-48
MsG0180003274.01	MsG0880046456.01	0.831442	1.665936e-55	1.808028e-52
MsG0180003336.01	MsG0880046456.01	0.824149	9.439722e-54	8.292821e-51
MsG0180003350.01	MsG0880046456.01	0.819075	1.405220e-52	1.070498e-49
MsG0180003352.01	MsG0880046456.01	0.840847	6.794664e-58	9.802264e-55
MsG0180003442.01	MsG0880046456.01	0.840450	8.634181e-58	1.230363e-54
MsG0180003451.01	MsG0880046456.01	0.884985	1.201016e-71	8.097947e-68
MsG0180003453.01	MsG0880046456.01	0.815249	1.018571e-51	6.985655e-49
MsG0180003634.01	MsG0880046456.01	0.803081	4.132059e-49	2.057410e-46
MsG0180003730.01	MsG0880046456.01	0.874099	8.798880e-68	3.910312e-64
MsG0180003933.01	MsG0880046456.01	0.818936	1.511113e-52	1.146930e-49
MsG0180004187.01	MsG0880046456.01	0.819572	1.082697e-52	8.363206e-50
MsG0180004188.01	MsG0880046456.01	0.806903	6.561184e-50	3.603989e-47
MsG0180004193.01	MsG0880046456.01	0.826868	2.141680e-54	2.033362e-51
MsG0180004302.01	MsG0880046456.01	0.832184	1.092345e-55	1.211749e-52
MsG0180004311.01	MsG0880046456.01	0.801337	9.443567e-49	4.498420e-46
MsG0180004458.01	MsG0880046456.01	0.845234	4.612676e-59	7.636487e-56
MsG0180004504.01	MsG0880046456.01	0.825141	5.510353e-54	4.980747e-51
MsG0180004865.01	MsG0880046456.01	0.856385	3.333906e-62	7.943895e-59
MsG0180004937.01	MsG0880046456.01	0.889692	1.928893e-73	1.572568e-69
MsG0180004987.01	MsG0880046456.01	0.813372	2.646988e-51	1.725554e-48
MsG0180005150.01	MsG0880046456.01	0.809883	1.518086e-50	9.018753e-48
MsG0180005283.01	MsG0880046456.01	0.846209	2.507193e-59	4.283087e-56
MsG0180005561.01	MsG0880046456.01	0.809296	2.029690e-50	1.187207e-47
MsG0180005568.01	MsG0880046456.01	0.859730	3.379088e-63	9.014376e-60
MsG0180005760.01	MsG0880046456.01	0.818161	2.265092e-52	1.682547e-49
MsG0180005806.01	MsG0880046456.01	0.860168	2.493236e-63	6.753221e-60
MsG0180005811.01	MsG0880046456.01	0.831532	1.582318e-55	1.722012e-52
MsG0180005969.01	MsG0880046456.01	0.810109	1.357399e-50	8.112131e-48
MsG0180005991.01	MsG0880046456.01	0.841807	3.797257e-58	5.643726e-55
MsG0280006349.01	MsG0880046456.01	0.819898	9.119101e-53	7.108166e-50
MsG0280006451.01	MsG0880046456.01	0.826541	2.563040e-54	2.410643e-51
MsG0780040319.01	MsG0880046456.01	0.853842	1.829217e-61	4.006096e-58
MsG0780040343.01	MsG0880046456.01	0.805359	1.386651e-49	7.321414e-47
MsG0780040413.01	MsG0880046456.01	0.811365	7.262804e-51	4.486877e-48
MsG0780040437.01	MsG0880046456.01	0.809099	2.236842e-50	1.301517e-47
MsG0780040838.01	MsG0880046456.01	0.804670	1.932339e-49	1.002305e-46
MsG0780040849.01	MsG0880046456.01	0.815626	8.395867e-52	5.818870e-49
MsG0780041004.01	MsG0880046456.01	0.835534	1.587171e-56	1.946369e-53
MsG0780041022.01	MsG0880046456.01	0.825270	5.135976e-54	4.659176e-51
MsG0780041218.01	MsG0880046456.01	0.824576	7.489830e-54	6.661145e-51
MsG0780041249.01	MsG0880046456.01	0.801443	8.984832e-49	4.291305e-46
MsG0780041256.01	MsG0880046456.01	0.812324	4.489286e-51	2.845685e-48
MsG0780041289.01	MsG0880046456.01	0.820917	5.322501e-53	4.268018e-50
MsG0780041478.01	MsG0880046456.01	0.801871	7.339177e-49	3.543680e-46
MsG0780041615.01	MsG0880046456.01	0.836962	6.881352e-57	8.810025e-54
MsG0780041617.01	MsG0880046456.01	0.841488	4.610495e-58	6.785361e-55
MsG0780041618.01	MsG0880046456.01	0.860974	1.420493e-63	3.955023e-60
MsG0780041640.01	MsG0880046456.01	0.825638	4.203504e-54	3.853301e-51
MsG0780041706.01	MsG0880046456.01	0.840102	1.064560e-57	1.500815e-54
MsG0780041768.01	MsG0880046456.01	0.816761	4.681388e-52	3.346625e-49
MsG0780041778.01	MsG0880046456.01	0.826964	2.031353e-54	1.934199e-51
MsG0780041792.01	MsG0880046456.01	0.848489	5.932259e-60	1.090578e-56
MsG0880041994.01	MsG0880046456.01	0.805403	1.357582e-49	7.175952e-47
MsG0880042006.01	MsG0880046456.01	0.866233	3.311572e-65	1.108010e-61
MsG0880042021.01	MsG0880046456.01	0.829078	6.293240e-55	6.372917e-52
MsG0880042030.01	MsG0880046456.01	0.819623	1.053861e-52	8.151344e-50
MsG0880042043.01	MsG0880046456.01	0.852231	5.288878e-61	1.097853e-57
MsG0880042343.01	MsG0880046456.01	0.847069	1.459941e-59	2.564575e-56
MsG0880042876.01	MsG0880046456.01	0.807420	5.100402e-50	2.839517e-47
MsG0880042895.01	MsG0880046456.01	0.837253	5.797131e-57	7.486710e-54
MsG0880042921.01	MsG0880046456.01	0.864902	8.701260e-65	2.776628e-61
MsG0880043009.01	MsG0880046456.01	0.807050	6.108080e-50	3.367913e-47
MsG0880043032.01	MsG0880046456.01	0.816024	6.844391e-52	4.795331e-49
MsG0880043114.01	MsG0880046456.01	0.819054	1.420270e-52	1.081400e-49
MsG0880043235.01	MsG0880046456.01	0.807034	6.155392e-50	3.392643e-47
MsG0880043259.01	MsG0880046456.01	0.847934	8.444982e-60	1.524946e-56
MsG0880043913.01	MsG0880046456.01	0.801706	7.934517e-49	3.814864e-46
MsG0280010637.01	MsG0880046456.01	0.838866	2.229841e-57	3.025848e-54
MsG0280010638.01	MsG0880046456.01	0.841103	5.820829e-58	8.463210e-55
MsG0280010974.01	MsG0880046456.01	0.822338	2.498408e-53	2.085314e-50
MsG0280010998.01	MsG0880046456.01	0.828925	6.856716e-55	6.912103e-52
MsG0280011067.01	MsG0880046456.01	0.806040	9.979397e-50	5.361795e-47
MsG0280011169.01	MsG0880046456.01	0.822567	2.210419e-53	1.857106e-50
MsG0280011189.01	MsG0880046456.01	0.815739	7.923881e-52	5.508753e-49
MsG0280011207.01	MsG0880046456.01	0.801231	9.924738e-49	4.715136e-46
MsG0280011270.01	MsG0880046456.01	0.881343	2.597898e-70	1.516375e-66
MsG0280011276.01	MsG0880046456.01	0.801793	7.615163e-49	3.669469e-46
MsG0280011279.01	MsG0880046456.01	0.816554	5.209687e-52	3.703052e-49
MsG0280011449.01	MsG0880046456.01	0.830188	3.380007e-55	3.535676e-52
MsG0280011451.01	MsG0880046456.01	0.801479	8.832324e-49	4.222380e-46
MsG0280011470.01	MsG0880046456.01	0.813611	2.344834e-51	1.538543e-48
MsG0380011662.01	MsG0880046456.01	0.824202	9.170926e-54	8.068684e-51
MsG0380012251.01	MsG0880046456.01	0.856801	2.516554e-62	6.077566e-59
MsG0380012270.01	MsG0880046456.01	0.825628	4.225439e-54	3.872452e-51
MsG0380012443.01	MsG0880046456.01	0.809587	1.757909e-50	1.036270e-47
MsG0380012583.01	MsG0880046456.01	0.834976	2.195006e-56	2.647325e-53
MsG0380013111.01	MsG0880046456.01	0.808124	3.612597e-50	2.048639e-47
MsG0380013177.01	MsG0880046456.01	0.824459	7.980723e-54	7.072770e-51
MsG0380013493.01	MsG0880046456.01	0.816442	5.519225e-52	3.910989e-49
MsG0380013499.01	MsG0880046456.01	0.826096	3.272149e-54	3.038851e-51
MsG0380013501.01	MsG0880046456.01	0.820672	6.060987e-53	4.826590e-50
MsG0380013530.01	MsG0880046456.01	0.854323	1.328898e-61	2.956386e-58
MsG0380013939.01	MsG0880046456.01	0.830133	3.485897e-55	3.640489e-52
MsG0380013955.01	MsG0880046456.01	0.808252	3.392694e-50	1.930504e-47
MsG0380013958.01	MsG0880046456.01	0.828687	7.828652e-55	7.837731e-52
MsG0380013964.01	MsG0880046456.01	0.817842	2.672972e-52	1.968343e-49
MsG0380013980.01	MsG0880046456.01	0.808665	2.769359e-50	1.592828e-47
MsG0380013992.01	MsG0880046456.01	0.801577	8.434197e-49	4.041946e-46
MsG0380013996.01	MsG0880046456.01	0.820524	6.555767e-53	5.199224e-50
MsG0380014007.01	MsG0880046456.01	0.800079	1.705418e-48	7.868811e-46
MsG0380014022.01	MsG0880046456.01	0.823227	1.551879e-53	1.328236e-50
MsG0380014030.01	MsG0880046456.01	0.806969	6.352496e-50	3.495411e-47
MsG0380014037.01	MsG0880046456.01	0.827326	1.664365e-54	1.601689e-51
MsG0380014049.01	MsG0880046456.01	0.810011	1.425123e-50	8.495281e-48
MsG0380014053.01	MsG0880046456.01	0.825867	3.708776e-54	3.422290e-51
MsG0380014144.01	MsG0880046456.01	0.817977	2.492708e-52	1.842254e-49
MsG0380014183.01	MsG0880046456.01	0.842757	2.127344e-58	3.257525e-55
MsG0380014411.01	MsG0880046456.01	0.831598	1.524727e-55	1.662562e-52
MsG0380014557.01	MsG0880046456.01	0.823703	1.200660e-53	1.041772e-50
MsG0380014558.01	MsG0880046456.01	0.804088	2.554398e-49	1.305296e-46
MsG0380014560.01	MsG0880046456.01	0.803453	3.461527e-49	1.740149e-46
MsG0380014729.01	MsG0880046456.01	0.810143	1.334373e-50	7.981388e-48
MsG0380014795.01	MsG0880046456.01	0.815382	9.513794e-52	6.549291e-49
MsG0680030754.01	MsG0880046456.01	0.816694	4.845083e-52	3.457190e-49
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MsG0780038417.01	MsG0880046456.01	0.813256	2.805933e-51	1.823254e-48
MsG0780038571.01	MsG0880046456.01	0.802663	5.042062e-49	2.483967e-46
MsG0780038653.01	MsG0880046456.01	0.815614	8.445190e-52	5.851390e-49
MsG0780038834.01	MsG0880046456.01	0.809654	1.700113e-50	1.003987e-47
MsG0780038986.01	MsG0880046456.01	0.837558	4.841821e-57	6.312744e-54
MsG0780039256.01	MsG0880046456.01	0.807917	3.999315e-50	2.255426e-47
MsG0780039315.01	MsG0880046456.01	0.815863	7.435296e-52	5.186140e-49
MsG0780039339.01	MsG0880046456.01	0.806851	6.728857e-50	3.691262e-47
MsG0780039401.01	MsG0880046456.01	0.823354	1.449437e-53	1.244939e-50
MsG0780039704.01	MsG0880046456.01	0.806441	8.213065e-50	4.458200e-47
MsG0780039859.01	MsG0880046456.01	0.858218	9.577351e-63	2.426181e-59
MsG0780039860.01	MsG0880046456.01	0.810732	9.958122e-51	6.050087e-48
MsG0780039879.01	MsG0880046456.01	0.822443	2.362964e-53	1.978130e-50
MsG0780040080.01	MsG0880046456.01	0.858749	6.651434e-63	1.715439e-59

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880046456.01.T01	MTR_0140s0030	97.573	206	5	0	1	206	117	322	1.57e-146	411
MsG0880046456.01.T01	MTR_0489s0020	97.573	206	5	0	1	206	117	322	1.57e-146	411
MsG0880046456.01.T01	MTR_3g039990	38.028	213	88	9	4	206	121	299	1.46e-26	103
MsG0880046456.01.T01	MTR_6g012180	35.533	197	108	7	11	205	130	309	9.80e-21	88.2
MsG0880046456.01.T01	MTR_7g010210	31.878	229	108	10	1	208	116	317	1.56e-17	79.7
MsG0880046456.01.T01	MTR_7g010210	40.678	118	43	4	1	105	116	219	9.50e-14	68.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880046456.01.T01	AT1G74650	32.474	194	98	7	23	208	75	243	2.92e-14	69.7
MsG0880046456.01.T01	AT3G28910	30.366	191	87	5	23	197	73	233	3.56e-14	69.3
MsG0880046456.01.T01	AT1G74650	32.474	194	98	7	23	208	80	248	3.83e-14	69.3
MsG0880046456.01.T01	AT3G28910	30.366	191	87	5	23	197	149	309	1.06e-13	68.9
MsG0880046456.01.T01	AT1G74650	32.812	192	96	7	23	206	156	322	1.58e-13	68.6
MsG0880046456.01.T01	AT3G47600	34.444	180	92	8	23	194	147	308	3.46e-13	67.4
MsG0880046456.01.T01	AT3G47600	34.444	180	92	8	23	194	153	314	4.86e-13	67.0
MsG0880046456.01.T01	AT5G62470	34.434	212	87	9	23	200	146	339	1.22e-11	63.2
MsG0880046456.01.T01	AT5G62470	34.434	212	87	9	23	200	145	338	1.25e-11	63.2

Find 45 sgRNAs with CRISPR-Local

Find 53 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTGATTATGCATCTCGATTT+AGG	0.240478	8:+73584632	MsG0880046456.01.T01:CDS
GATTAATATTAAAGCAAATA+TGG	0.292292	8:+73584726	MsG0880046456.01.T01:CDS
TGAAAACATTTCTAGATTGA+TGG	0.297412	8:+73584474	MsG0880046456.01.T01:CDS
AGCCTCAGATAAGGCTTGTT+TGG	0.361155	8:-73584323	None:intergenic
CTTTCCCATTGACCTTTATA+CGG	0.370223	8:-73584274	None:intergenic
TCGAGATGCATAATCAGATT+TGG	0.373847	8:-73584626	None:intergenic
CGTTCGCAGCTGCCGTATAA+AGG	0.376269	8:+73584262	MsG0880046456.01.T01:CDS
TTTGTTTCAGCTGATGAGTT+AGG	0.376364	8:-73584514	None:intergenic
CATATGGAGATGGAATATTC+AGG	0.382987	8:-73584441	None:intergenic
AATCAGATTTGGTTGAGTTA+AGG	0.409124	8:-73584615	None:intergenic
GATGAGGGTTTCATCTGATC+AGG	0.419961	8:-73584385	None:intergenic
TAATATTAATCCTTTCCTCT+TGG	0.421047	8:-73584714	None:intergenic
AGCTTATAACATGTCATTAG+AGG	0.422579	8:+73584824	MsG0880046456.01.T01:CDS
GACATGTTATAAGCTCTTCA+TGG	0.424640	8:-73584816	None:intergenic
GGAGATGGAATATTCAGGTT+TGG	0.447433	8:-73584436	None:intergenic
TATTAATCCTTTCCTCTTGG+TGG	0.453369	8:-73584711	None:intergenic
AGCTGCCGTATAAAGGTCAA+TGG	0.472504	8:+73584269	MsG0880046456.01.T01:CDS
ATCGATATTCAGCAACATGC+AGG	0.473325	8:+73584543	MsG0880046456.01.T01:CDS
TTTCTAGATTGATGGAAACT+TGG	0.473758	8:+73584482	MsG0880046456.01.T01:CDS
GGCAAAGTACCAAGGGTTGT+AGG	0.474388	8:-73584364	None:intergenic
GGGTTGTAGGGTTATGTTGA+AGG	0.484469	8:-73584351	None:intergenic
GATGGAATATTCAGGTTTGG+TGG	0.513419	8:-73584433	None:intergenic
TATTAAAGCAAATATGGAAA+CGG	0.514444	8:+73584732	MsG0880046456.01.T01:CDS
GCTACAAACAGATATTCATA+TGG	0.516194	8:+73584300	MsG0880046456.01.T01:CDS
CAACATAACCCTACAACCCT+TGG	0.522290	8:+73584355	MsG0880046456.01.T01:CDS
CTTCAACTTGAACACAAAAG+AGG	0.524145	8:+73584678	MsG0880046456.01.T01:CDS
TTTCCTCTTGGTGGAAGAAG+AGG	0.526621	8:-73584702	None:intergenic
GCAAAGTACCAAGGGTTGTA+GGG	0.526670	8:-73584363	None:intergenic
ATAAAGGTCAATGGGAAAGA+AGG	0.529786	8:+73584278	MsG0880046456.01.T01:CDS
TCTTCTTCCACCAAGAGGAA+AGG	0.547130	8:+73584704	MsG0880046456.01.T01:CDS
TAGCTTGATGCATATGGAGA+TGG	0.555943	8:-73584451	None:intergenic
GCTGCCGTATAAAGGTCAAT+GGG	0.556660	8:+73584270	MsG0880046456.01.T01:CDS
GATCAAAGTAGTAACGATGA+AGG	0.558829	8:+73584223	MsG0880046456.01.T01:CDS
CGATTTAGGTCAACTCATGA+AGG	0.562437	8:+73584646	MsG0880046456.01.T01:CDS
TTCAACTTGAACACAAAAGA+GGG	0.567559	8:+73584679	MsG0880046456.01.T01:CDS
GGTTGTAGGGTTATGTTGAA+GGG	0.574998	8:-73584350	None:intergenic
AAGGGACAAAGCCTCAGATA+AGG	0.576279	8:-73584332	None:intergenic
CAGGGATCAAGTTGTAGTGA+AGG	0.587215	8:+73584562	MsG0880046456.01.T01:CDS
TCGATATTCAGCAACATGCA+GGG	0.617549	8:+73584544	MsG0880046456.01.T01:CDS
CTGATCAGGCAAAGTACCAA+GGG	0.619842	8:-73584371	None:intergenic
TCTGATCAGGCAAAGTACCA+AGG	0.632255	8:-73584372	None:intergenic
AGCACAACACAAGATCATCA+TGG	0.642061	8:+73584592	MsG0880046456.01.T01:CDS
GGGCCTCTTCTTCCACCAAG+AGG	0.657998	8:+73584699	MsG0880046456.01.T01:CDS
GGCCAAACAAGCCTTATCTG+AGG	0.663946	8:+73584321	MsG0880046456.01.T01:CDS
CATGTTGCTGAATATCGATG+AGG	0.741627	8:-73584539	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GATTAATATTAAAGCAAATA+TGG	+	Chr8:73584726-73584745	MsG0880046456.01.T01:CDS	15.0%
!!	TATTAAAGCAAATATGGAAA+CGG	+	Chr8:73584732-73584751	MsG0880046456.01.T01:CDS	20.0%
!	TAATATTAATCCTTTCCTCT+TGG	-	Chr8:73584717-73584736	None:intergenic	25.0%
!!	TGAAAACATTTCTAGATTGA+TGG	+	Chr8:73584474-73584493	MsG0880046456.01.T01:CDS	25.0%
!!!	AAAAATGGCTTTTTGAAGAT+GGG	+	Chr8:73584776-73584795	MsG0880046456.01.T01:CDS	25.0%
	AGAATGAGAAAAACTTGATG+AGG	-	Chr8:73584404-73584423	None:intergenic	30.0%
	CTCTTACTTTGCTTGAAAAA+TGG	+	Chr8:73584761-73584780	MsG0880046456.01.T01:CDS	30.0%
	GAATGAGAAAAACTTGATGA+GGG	-	Chr8:73584403-73584422	None:intergenic	30.0%
	GCTACAAACAGATATTCATA+TGG	+	Chr8:73584300-73584319	MsG0880046456.01.T01:CDS	30.0%
	TTCAACTTGAACACAAAAGA+GGG	+	Chr8:73584679-73584698	MsG0880046456.01.T01:CDS	30.0%
	TTTCTAGATTGATGGAAACT+TGG	+	Chr8:73584482-73584501	MsG0880046456.01.T01:CDS	30.0%
!	AATCAGATTTGGTTGAGTTA+AGG	-	Chr8:73584618-73584637	None:intergenic	30.0%
!	TTTTCATAGCTTGATGCATA+TGG	-	Chr8:73584460-73584479	None:intergenic	30.0%
!!	AAAATGGCTTTTTGAAGATG+GGG	+	Chr8:73584777-73584796	MsG0880046456.01.T01:CDS	30.0%
!!	GAAAAATGGCTTTTTGAAGA+TGG	+	Chr8:73584775-73584794	MsG0880046456.01.T01:CDS	30.0%
!!!	CATTTTTCAAGCAAAGTAAG+AGG	-	Chr8:73584763-73584782	None:intergenic	30.0%
	ATAAAGGTCAATGGGAAAGA+AGG	+	Chr8:73584278-73584297	MsG0880046456.01.T01:CDS	35.0%
	CATATGGAGATGGAATATTC+AGG	-	Chr8:73584444-73584463	None:intergenic	35.0%
	CTGATTATGCATCTCGATTT+AGG	+	Chr8:73584632-73584651	MsG0880046456.01.T01:CDS	35.0%
	CTTCAACTTGAACACAAAAG+AGG	+	Chr8:73584678-73584697	MsG0880046456.01.T01:CDS	35.0%
	CTTTCCCATTGACCTTTATA+CGG	-	Chr8:73584277-73584296	None:intergenic	35.0%
	GACATGTTATAAGCTCTTCA+TGG	-	Chr8:73584819-73584838	None:intergenic	35.0%
	GATCAAAGTAGTAACGATGA+AGG	+	Chr8:73584223-73584242	MsG0880046456.01.T01:CDS	35.0%
	TATTAATCCTTTCCTCTTGG+TGG	-	Chr8:73584714-73584733	None:intergenic	35.0%
	TCGAGATGCATAATCAGATT+TGG	-	Chr8:73584629-73584648	None:intergenic	35.0%
	TTTGTTTCAGCTGATGAGTT+AGG	-	Chr8:73584517-73584536	None:intergenic	35.0%
!!	AAATGGCTTTTTGAAGATGG+GGG	+	Chr8:73584778-73584797	MsG0880046456.01.T01:CDS	35.0%
	AGCACAACACAAGATCATCA+TGG	+	Chr8:73584592-73584611	MsG0880046456.01.T01:CDS	40.0%
	ATCGATATTCAGCAACATGC+AGG	+	Chr8:73584543-73584562	MsG0880046456.01.T01:CDS	40.0%
	CATGTTGCTGAATATCGATG+AGG	-	Chr8:73584542-73584561	None:intergenic	40.0%
	CGATTTAGGTCAACTCATGA+AGG	+	Chr8:73584646-73584665	MsG0880046456.01.T01:CDS	40.0%
	GGTTGTAGGGTTATGTTGAA+GGG	-	Chr8:73584353-73584372	None:intergenic	40.0%
	TAGCTTGATGCATATGGAGA+TGG	-	Chr8:73584454-73584473	None:intergenic	40.0%
	TCGATATTCAGCAACATGCA+GGG	+	Chr8:73584544-73584563	MsG0880046456.01.T01:CDS	40.0%
!	GATGGAATATTCAGGTTTGG+TGG	-	Chr8:73584436-73584455	None:intergenic	40.0%
!	GGAGATGGAATATTCAGGTT+TGG	-	Chr8:73584439-73584458	None:intergenic	40.0%
	AAGGGACAAAGCCTCAGATA+AGG	-	Chr8:73584335-73584354	None:intergenic	45.0%
	AGCTGCCGTATAAAGGTCAA+TGG	+	Chr8:73584269-73584288	MsG0880046456.01.T01:CDS	45.0%
	CAACATAACCCTACAACCCT+TGG	+	Chr8:73584355-73584374	MsG0880046456.01.T01:CDS	45.0%
	GATGAGGGTTTCATCTGATC+AGG	-	Chr8:73584388-73584407	None:intergenic	45.0%
	GCTGCCGTATAAAGGTCAAT+GGG	+	Chr8:73584270-73584289	MsG0880046456.01.T01:CDS	45.0%
	GGGTTGTAGGGTTATGTTGA+AGG	-	Chr8:73584354-73584373	None:intergenic	45.0%
	TCTTCTTCCACCAAGAGGAA+AGG	+	Chr8:73584704-73584723	MsG0880046456.01.T01:CDS	45.0%
	TTTCCTCTTGGTGGAAGAAG+AGG	-	Chr8:73584705-73584724	None:intergenic	45.0%
!	AGCCTCAGATAAGGCTTGTT+TGG	-	Chr8:73584326-73584345	None:intergenic	45.0%
!	CAGGGATCAAGTTGTAGTGA+AGG	+	Chr8:73584562-73584581	MsG0880046456.01.T01:CDS	45.0%
!	CTGATCAGGCAAAGTACCAA+GGG	-	Chr8:73584374-73584393	None:intergenic	45.0%
!	GCAAAGTACCAAGGGTTGTA+GGG	-	Chr8:73584366-73584385	None:intergenic	45.0%
!	TCTGATCAGGCAAAGTACCA+AGG	-	Chr8:73584375-73584394	None:intergenic	45.0%
!	GGCAAAGTACCAAGGGTTGT+AGG	-	Chr8:73584367-73584386	None:intergenic	50.0%
!	GGCCAAACAAGCCTTATCTG+AGG	+	Chr8:73584321-73584340	MsG0880046456.01.T01:CDS	50.0%
	CGTTCGCAGCTGCCGTATAA+AGG	+	Chr8:73584262-73584281	MsG0880046456.01.T01:CDS	55.0%
	GGGCCTCTTCTTCCACCAAG+AGG	+	Chr8:73584699-73584718	MsG0880046456.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	73584214	73584843	73584214	ID=MsG0880046456.01;Name=MsG0880046456.01
Chr8	mRNA	73584214	73584843	73584214	ID=MsG0880046456.01.T01;Parent=MsG0880046456.01;Name=MsG0880046456.01.T01;_AED=0.32;_eAED=0.32;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|209
Chr8	exon	73584214	73584843	73584214	ID=MsG0880046456.01.T01:exon:4052;Parent=MsG0880046456.01.T01
Chr8	CDS	73584214	73584843	73584214	ID=MsG0880046456.01.T01:cds;Parent=MsG0880046456.01.T01

Gene Sequence

>MsG0880046456.01.T01

ATGAACAAAGATCAAAGTAGTAACGATGAAGGTGTTGATCAAGAATCTCGTTCGCAGCTGCCGTATAAAGGTCAATGGGAAAGAAGGCTACAAACAGATATTCATATGGCCAAACAAGCCTTATCTGAGGCTTTGTCCCTTCAACATAACCCTACAACCCTTGGTACTTTGCCTGATCAGATGAAACCCTCATCAAGTTTTTCTCATTCTCATGAACATCCACCAAACCTGAATATTCCATCTCCATATGCATCAAGCTATGAAAACATTTCTAGATTGATGGAAACTTGGATGAAATCACCTAACTCATCAGCTGAAACAAATTCCTCATCGATATTCAGCAACATGCAGGGATCAAGTTGTAGTGAAGGAGCACAAAGCACAACACAAGATCATCATGGCCTTAACTCAACCAAATCTGATTATGCATCTCGATTTAGGTCAACTCATGAAGGAAACAACAGCTTCAACTTGAACACAAAAGAGGGCCTCTTCTTCCACCAAGAGGAAAGGATTAATATTAAAGCAAATATGGAAACGGATGTTCCTCTTACTTTGCTTGAAAAATGGCTTTTTGAAGATGGGGGAGCAAGTCATGAGTGCCATGAAGAGCTTATAACATGTCATTAG

Protein sequence

>MsG0880046456.01.T01

MNKDQSSNDEGVDQESRSQLPYKGQWERRLQTDIHMAKQALSEALSLQHNPTTLGTLPDQMKPSSSFSHSHEHPPNLNIPSPYASSYENISRLMETWMKSPNSSAETNSSSIFSNMQGSSCSEGAQSTTQDHHGLNSTKSDYASRFRSTHEGNNSFNLNTKEGLFFHQEERINIKANMETDVPLTLLEKWLFEDGGASHECHEELITCH*