Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011443.01.T01 | AES68135.1 | 71.353 | 377 | 62 | 7 | 54 | 405 | 18 | 373 | 8.52E-160 | 465 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011443.01.T01 | G7IUV6 | 71.353 | 377 | 62 | 7 | 54 | 405 | 18 | 373 | 4.07e-160 | 465 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048969.01 | MsG0280011443.01 | 0.813688 | 2.255569e-51 | 1.483013e-48 |
| MsG0180004277.01 | MsG0280011443.01 | 0.821279 | 4.393864e-53 | 3.558696e-50 |
| MsG0180004865.01 | MsG0280011443.01 | 0.800016 | 1.756370e-48 | 8.090798e-46 |
| MsG0180005283.01 | MsG0280011443.01 | 0.833582 | 4.910436e-56 | 5.679230e-53 |
| MsG0180005758.01 | MsG0280011443.01 | -0.825867 | 3.708336e-54 | 3.421893e-51 |
| MsG0280010888.01 | MsG0280011443.01 | -0.826066 | 3.325848e-54 | 3.086116e-51 |
| MsG0280011372.01 | MsG0280011443.01 | 0.815517 | 8.879652e-52 | 6.135593e-49 |
| MsG0280011443.01 | MsG0380011662.01 | 0.805022 | 1.631052e-49 | 8.537355e-47 |
| MsG0280011443.01 | MsG0380011739.01 | 0.807870 | 4.092496e-50 | 2.305152e-47 |
| MsG0280011443.01 | MsG0380012251.01 | 0.805697 | 1.177849e-49 | 6.273465e-47 |
| MsG0280011443.01 | MsG0380013177.01 | 0.811183 | 7.953799e-51 | 4.890412e-48 |
| MsG0280011443.01 | MsG0380014728.01 | 0.810338 | 1.211679e-50 | 7.284203e-48 |
| MsG0280011443.01 | MsG0380014794.01 | 0.828368 | 9.344731e-55 | 9.269310e-52 |
| MsG0280011443.01 | MsG0380015501.01 | 0.828819 | 7.270576e-55 | 7.306932e-52 |
| MsG0280011443.01 | MsG0380015943.01 | 0.803994 | 2.672675e-49 | 1.362462e-46 |
| MsG0280011443.01 | MsG0480018323.01 | 0.831839 | 1.329868e-55 | 1.460541e-52 |
| MsG0280011443.01 | MsG0480018585.01 | -0.803223 | 3.863164e-49 | 1.930611e-46 |
| MsG0280011443.01 | MsG0480018631.01 | 0.805500 | 1.295666e-49 | 6.865552e-47 |
| MsG0280011443.01 | MsG0480018844.01 | 0.850041 | 2.194243e-60 | 4.243071e-57 |
| MsG0280011443.01 | MsG0480019604.01 | 0.824224 | 9.065166e-54 | 7.980489e-51 |
| MsG0280011443.01 | MsG0480020229.01 | 0.820871 | 5.455221e-53 | 4.368899e-50 |
| MsG0280011443.01 | MsG0480021597.01 | 0.816638 | 4.987937e-52 | 3.553703e-49 |
| MsG0280011443.01 | MsG0480021654.01 | 0.807187 | 5.711950e-50 | 3.160821e-47 |
| MsG0280011443.01 | MsG0480021856.01 | 0.836074 | 1.157602e-56 | 1.443015e-53 |
| MsG0280011443.01 | MsG0480023166.01 | 0.804187 | 2.436995e-49 | 1.248399e-46 |
| MsG0280011443.01 | MsG0480023502.01 | 0.805493 | 1.299612e-49 | 6.885404e-47 |
| MsG0280011443.01 | MsG0480023616.01 | 0.803131 | 4.036165e-49 | 2.012256e-46 |
| MsG0280011443.01 | MsG0580028093.01 | 0.803484 | 3.409799e-49 | 1.715568e-46 |
| MsG0280011443.01 | MsG0680031791.01 | 0.805170 | 1.519245e-49 | 7.982536e-47 |
| MsG0280011443.01 | MsG0680031997.01 | 0.807502 | 4.899012e-50 | 2.733274e-47 |
| MsG0280011443.01 | MsG0680034480.01 | 0.825627 | 4.229350e-54 | 3.875791e-51 |
| MsG0280011443.01 | MsG0780036881.01 | 0.823467 | 1.363946e-53 | 1.175314e-50 |
| MsG0280011443.01 | MsG0780038115.01 | 0.812820 | 3.497359e-51 | 2.245978e-48 |
| MsG0280011443.01 | MsG0780039339.01 | 0.809348 | 1.978080e-50 | 1.158661e-47 |
| MsG0280011443.01 | MsG0780039984.01 | -0.800256 | 1.569257e-48 | 7.273366e-46 |
| MsG0280011443.01 | MsG0780041778.01 | 0.801450 | 8.951200e-49 | 4.276143e-46 |
| MsG0280011443.01 | MsG0880045412.01 | 0.808355 | 3.225804e-50 | 1.840552e-47 |
| MsG0280011443.01 | MsG0880045617.01 | 0.824313 | 8.635721e-54 | 7.621219e-51 |
| MsG0280011443.01 | MsG0880045709.01 | 0.821684 | 3.542846e-53 | 2.902340e-50 |
| MsG0280011443.01 | MsG0880046024.01 | 0.818128 | 2.303642e-52 | 1.709699e-49 |
| MsG0280011443.01 | MsG0880046025.01 | 0.828296 | 9.729323e-55 | 9.630241e-52 |
| MsG0280011443.01 | MsG0880046594.01 | 0.802036 | 6.787091e-49 | 3.290779e-46 |
| MsG0280006706.01 | MsG0280011443.01 | 0.817691 | 2.891966e-52 | 2.120731e-49 |
| MsG0280007102.01 | MsG0280011443.01 | 0.804575 | 2.022372e-49 | 1.046438e-46 |
| MsG0280007754.01 | MsG0280011443.01 | 0.851331 | 9.515866e-61 | 1.919640e-57 |
| MsG0280007755.01 | MsG0280011443.01 | 0.823663 | 1.226849e-53 | 1.063185e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011443.01.T01 | MTR_2g103620 | 71.353 | 377 | 62 | 7 | 54 | 405 | 18 | 373 | 1.03e-163 | 465 |
| MsG0280011443.01.T01 | MTR_2g103640 | 67.663 | 368 | 57 | 10 | 53 | 380 | 8 | 353 | 7.46e-145 | 416 |
| MsG0280011443.01.T01 | MTR_5g038810 | 41.772 | 474 | 127 | 9 | 54 | 405 | 31 | 477 | 1.07e-92 | 293 |
| MsG0280011443.01.T01 | MTR_2g091015 | 53.205 | 312 | 88 | 7 | 148 | 405 | 556 | 863 | 3.05e-77 | 257 |
| MsG0280011443.01.T01 | MTR_2g091015 | 29.344 | 259 | 92 | 6 | 97 | 264 | 106 | 364 | 9.85e-17 | 82.8 |
| MsG0280011443.01.T01 | MTR_2g091030 | 41.036 | 502 | 144 | 8 | 53 | 405 | 85 | 583 | 2.47e-75 | 245 |
| MsG0280011443.01.T01 | MTR_2g091335 | 54.483 | 290 | 97 | 5 | 148 | 405 | 313 | 599 | 2.56e-68 | 227 |
| MsG0280011443.01.T01 | MTR_2g091335 | 33.455 | 275 | 87 | 10 | 67 | 257 | 80 | 342 | 1.58e-21 | 97.4 |
| MsG0280011443.01.T01 | MTR_6g045183 | 50.903 | 277 | 95 | 5 | 171 | 409 | 390 | 663 | 8.15e-68 | 229 |
| MsG0280011443.01.T01 | MTR_6g045183 | 36.810 | 163 | 87 | 4 | 61 | 223 | 100 | 246 | 1.41e-14 | 76.3 |
| MsG0280011443.01.T01 | MTR_5g078510 | 47.403 | 308 | 101 | 5 | 162 | 411 | 145 | 449 | 2.91e-67 | 223 |
| MsG0280011443.01.T01 | MTR_2g091240 | 41.014 | 434 | 167 | 11 | 62 | 409 | 56 | 486 | 1.74e-65 | 219 |
| MsG0280011443.01.T01 | MTR_2g091250 | 43.781 | 402 | 151 | 9 | 54 | 411 | 828 | 1198 | 5.44e-63 | 219 |
| MsG0280011443.01.T01 | MTR_2g091250 | 34.188 | 234 | 109 | 5 | 62 | 250 | 69 | 302 | 3.44e-23 | 102 |
| MsG0280011443.01.T01 | MTR_2g091285 | 48.667 | 300 | 112 | 6 | 144 | 405 | 289 | 584 | 1.04e-62 | 212 |
| MsG0280011443.01.T01 | MTR_2g091285 | 35.484 | 217 | 108 | 6 | 86 | 275 | 109 | 320 | 2.02e-19 | 90.9 |
| MsG0280011443.01.T01 | MTR_2g093010 | 47.988 | 323 | 116 | 9 | 97 | 409 | 537 | 817 | 1.99e-62 | 216 |
| MsG0280011443.01.T01 | MTR_2g093010 | 39.163 | 263 | 87 | 9 | 61 | 254 | 65 | 323 | 5.04e-24 | 105 |
| MsG0280011443.01.T01 | MTR_2g093010 | 47.988 | 323 | 116 | 9 | 97 | 409 | 538 | 818 | 2.54e-62 | 216 |
| MsG0280011443.01.T01 | MTR_2g093010 | 39.163 | 263 | 87 | 9 | 61 | 254 | 66 | 324 | 5.58e-24 | 105 |
| MsG0280011443.01.T01 | MTR_2g104190 | 47.712 | 306 | 121 | 5 | 112 | 408 | 331 | 606 | 2.58e-60 | 206 |
| MsG0280011443.01.T01 | MTR_2g104190 | 48.352 | 91 | 35 | 1 | 60 | 150 | 124 | 202 | 2.65e-12 | 68.9 |
| MsG0280011443.01.T01 | MTR_2g091245 | 44.586 | 314 | 119 | 5 | 141 | 405 | 246 | 553 | 8.52e-60 | 206 |
| MsG0280011443.01.T01 | MTR_2g091245 | 31.349 | 252 | 112 | 7 | 62 | 255 | 46 | 294 | 3.25e-14 | 75.1 |
| MsG0280011443.01.T01 | MTR_2g091105 | 41.687 | 403 | 177 | 9 | 64 | 411 | 192 | 591 | 2.41e-58 | 202 |
| MsG0280011443.01.T01 | MTR_2g091105 | 34.000 | 300 | 99 | 5 | 54 | 254 | 49 | 348 | 1.16e-30 | 124 |
| MsG0280011443.01.T01 | MTR_2g091090 | 50.758 | 264 | 99 | 4 | 166 | 412 | 300 | 549 | 6.70e-58 | 201 |
| MsG0280011443.01.T01 | MTR_2g091090 | 33.333 | 252 | 148 | 5 | 17 | 251 | 14 | 262 | 9.42e-26 | 110 |
| MsG0280011443.01.T01 | MTR_2g091260 | 50.182 | 275 | 96 | 5 | 164 | 411 | 520 | 780 | 3.68e-57 | 201 |
| MsG0280011443.01.T01 | MTR_2g091260 | 39.594 | 197 | 112 | 1 | 61 | 250 | 98 | 294 | 5.54e-27 | 114 |
| MsG0280011443.01.T01 | MTR_2g090980 | 54.589 | 207 | 78 | 3 | 212 | 405 | 308 | 511 | 5.63e-53 | 185 |
| MsG0280011443.01.T01 | MTR_2g091025 | 36.735 | 441 | 169 | 11 | 62 | 411 | 101 | 522 | 6.90e-53 | 186 |
| MsG0280011443.01.T01 | MTR_8g107320 | 54.315 | 197 | 73 | 4 | 202 | 397 | 24 | 204 | 2.21e-51 | 172 |
| MsG0280011443.01.T01 | MTR_2g010420 | 40.673 | 327 | 160 | 8 | 102 | 408 | 423 | 735 | 2.24e-51 | 184 |
| MsG0280011443.01.T01 | MTR_2g010420 | 45.247 | 263 | 113 | 6 | 166 | 408 | 484 | 735 | 4.43e-51 | 184 |
| MsG0280011443.01.T01 | MTR_2g091080 | 50.365 | 274 | 102 | 5 | 163 | 405 | 483 | 753 | 6.09e-50 | 180 |
| MsG0280011443.01.T01 | MTR_2g091080 | 44.805 | 154 | 72 | 5 | 61 | 211 | 44 | 187 | 8.44e-20 | 92.4 |
| MsG0280011443.01.T01 | MTR_2g091370 | 42.857 | 266 | 115 | 6 | 166 | 411 | 495 | 743 | 4.75e-48 | 176 |
| MsG0280011443.01.T01 | MTR_2g091370 | 35.573 | 253 | 109 | 7 | 53 | 251 | 83 | 335 | 4.42e-19 | 90.1 |
| MsG0280011443.01.T01 | MTR_3g110385 | 47.727 | 264 | 106 | 6 | 164 | 408 | 477 | 727 | 1.80e-47 | 174 |
| MsG0280011443.01.T01 | MTR_2g091290 | 43.728 | 279 | 116 | 7 | 165 | 405 | 454 | 729 | 2.18e-47 | 173 |
| MsG0280011443.01.T01 | MTR_2g091290 | 45.299 | 117 | 61 | 1 | 62 | 178 | 71 | 184 | 3.80e-16 | 81.3 |
| MsG0280011443.01.T01 | MTR_2g091110 | 38.765 | 405 | 134 | 13 | 93 | 411 | 829 | 1205 | 1.47e-42 | 160 |
| MsG0280011443.01.T01 | MTR_2g091110 | 43.307 | 127 | 62 | 3 | 56 | 182 | 40 | 156 | 9.07e-14 | 73.9 |
| MsG0280011443.01.T01 | MTR_2g091110 | 38.400 | 125 | 71 | 2 | 129 | 250 | 732 | 853 | 4.53e-11 | 65.5 |
| MsG0280011443.01.T01 | MTR_8g106540 | 39.209 | 278 | 135 | 10 | 127 | 403 | 33 | 277 | 1.11e-36 | 135 |
| MsG0280011443.01.T01 | MTR_2g091070 | 55.797 | 138 | 52 | 2 | 280 | 411 | 21 | 155 | 1.29e-31 | 120 |
| MsG0280011443.01.T01 | MTR_2g091325 | 36.066 | 244 | 97 | 5 | 66 | 250 | 101 | 344 | 5.36e-28 | 116 |
| MsG0280011443.01.T01 | MTR_2g091325 | 46.377 | 138 | 47 | 4 | 130 | 250 | 420 | 547 | 1.05e-15 | 79.3 |
| MsG0280011443.01.T01 | MTR_2g091040 | 32.941 | 255 | 151 | 5 | 14 | 251 | 11 | 262 | 3.42e-25 | 107 |
| MsG0280011443.01.T01 | MTR_2g091040 | 33.617 | 235 | 112 | 6 | 166 | 372 | 300 | 518 | 8.00e-16 | 79.7 |
| MsG0280011443.01.T01 | MTR_5g078500 | 33.469 | 245 | 104 | 4 | 65 | 250 | 59 | 303 | 2.64e-22 | 96.7 |
| MsG0280011443.01.T01 | MTR_8g467200 | 37.555 | 229 | 122 | 7 | 187 | 405 | 80 | 297 | 1.04e-19 | 91.3 |
| MsG0280011443.01.T01 | MTR_7g056313 | 29.010 | 293 | 104 | 7 | 62 | 263 | 54 | 333 | 2.25e-19 | 89.4 |
| MsG0280011443.01.T01 | MTR_4g084920 | 33.898 | 295 | 109 | 11 | 121 | 342 | 10 | 291 | 7.68e-19 | 87.0 |
| MsG0280011443.01.T01 | MTR_4g046660 | 47.727 | 132 | 60 | 3 | 276 | 405 | 447 | 571 | 2.33e-18 | 87.8 |
| MsG0280011443.01.T01 | MTR_2g091010 | 35.019 | 257 | 106 | 7 | 53 | 252 | 88 | 340 | 2.87e-18 | 87.4 |
| MsG0280011443.01.T01 | MTR_2g091330 | 36.967 | 211 | 112 | 4 | 54 | 250 | 86 | 289 | 2.23e-17 | 84.7 |
| MsG0280011443.01.T01 | MTR_2g091315 | 50.515 | 97 | 42 | 1 | 62 | 158 | 65 | 155 | 2.93e-16 | 81.3 |
| MsG0280011443.01.T01 | MTR_7g056317 | 67.073 | 82 | 23 | 2 | 324 | 405 | 1 | 78 | 1.65e-13 | 67.0 |
| MsG0280011443.01.T01 | MTR_2g091280 | 29.876 | 241 | 85 | 5 | 94 | 250 | 105 | 345 | 2.53e-13 | 72.4 |
| MsG0280011443.01.T01 | MTR_2g091280 | 36.145 | 166 | 44 | 3 | 130 | 250 | 563 | 711 | 3.88e-12 | 68.6 |
| MsG0280011443.01.T01 | MTR_2g091005 | 41.837 | 98 | 45 | 2 | 61 | 156 | 72 | 159 | 3.12e-11 | 65.5 |
| MsG0280011443.01.T01 | MTR_2g064120 | 51.899 | 79 | 37 | 1 | 61 | 138 | 127 | 205 | 3.24e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011443.01.T01 | AT5G27220 | 29.412 | 306 | 189 | 11 | 108 | 405 | 512 | 798 | 2.32e-13 | 72.8 |
| MsG0280011443.01.T01 | AT5G27220 | 29.412 | 306 | 189 | 11 | 108 | 405 | 512 | 798 | 2.32e-13 | 72.8 |
| MsG0280011443.01.T01 | AT5G27220 | 29.412 | 306 | 189 | 11 | 108 | 405 | 512 | 798 | 2.66e-13 | 72.4 |
| MsG0280011443.01.T01 | AT5G27220 | 29.412 | 306 | 189 | 11 | 108 | 405 | 512 | 798 | 2.66e-13 | 72.4 |
Find 68 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTCAATATTTCTCTTTA+TGG | 0.075175 | 2:+84082841 | None:intergenic |
| TATATATGTTATAGATTATT+TGG | 0.091343 | 2:-84083301 | MsG0280011443.01.T01:intron |
| CTTCGTTGAATATGAATAAA+AGG | 0.247349 | 2:-84082979 | MsG0280011443.01.T01:CDS |
| AGAAAATACTGAAAATTCTT+TGG | 0.251631 | 2:-84081752 | MsG0280011443.01.T01:CDS |
| AGATCCAGCAAAACTTGTTT+TGG | 0.272394 | 2:-84081947 | MsG0280011443.01.T01:CDS |
| ACAGCTTTGTCTCCCTTCTT+AGG | 0.285668 | 2:+84081895 | None:intergenic |
| CTGCAAAGAGCTAGAAAATA+AGG | 0.286190 | 2:-84082816 | MsG0280011443.01.T01:CDS |
| GAGTCAAAGCTGAATAATTT+TGG | 0.290126 | 2:-84082450 | MsG0280011443.01.T01:CDS |
| CTTACACAAGATTTAATATC+TGG | 0.303638 | 2:+84081820 | None:intergenic |
| GATGGAACAAGTGAGGAATT+TGG | 0.315869 | 2:-84081997 | MsG0280011443.01.T01:CDS |
| AGATAGCTGTAAAGCTGTTT+AGG | 0.328283 | 2:-84081621 | MsG0280011443.01.T01:CDS |
| CCTTGGAAAGCAACATTCCT+TGG | 0.364693 | 2:-84083068 | MsG0280011443.01.T01:CDS |
| TCAAAAGAGGAGGAATTTAA+AGG | 0.372635 | 2:-84082606 | MsG0280011443.01.T01:CDS |
| CAATTCAGTATCACCATTGA+TGG | 0.374340 | 2:-84082015 | MsG0280011443.01.T01:CDS |
| GAAAATTCTTTGGAGGTTCT+CGG | 0.397484 | 2:-84081742 | MsG0280011443.01.T01:CDS |
| TTCCTCACTTGTTCCATCAA+TGG | 0.405596 | 2:+84082002 | None:intergenic |
| TTGTCTCCCTTCTTAGGCAG+TGG | 0.411661 | 2:+84081901 | None:intergenic |
| TTCTTAGGCAGTGGAATCGT+GGG | 0.412112 | 2:+84081910 | None:intergenic |
| GGACAGCCAAGTGGGGTGAT+TGG | 0.430571 | 2:-84083261 | MsG0280011443.01.T01:CDS |
| TTCCTTCCAATCACCCCACT+TGG | 0.431343 | 2:+84083255 | None:intergenic |
| GAAGGAAGAAGTAGATCAAA+AGG | 0.433938 | 2:-84083239 | MsG0280011443.01.T01:intron |
| TTGGATTTAACAGCACGAAC+TGG | 0.439874 | 2:-84083282 | MsG0280011443.01.T01:CDS |
| AGGAATTTGAATCAAAAGAA+AGG | 0.441284 | 2:-84082657 | MsG0280011443.01.T01:CDS |
| CCAAGGAATGTTGCTTTCCA+AGG | 0.444908 | 2:+84083068 | None:intergenic |
| CTTTGAGATTGTCCTCAGCT+TGG | 0.447230 | 2:+84082520 | None:intergenic |
| ATTTGACAGCAACAATTCCT+TGG | 0.450325 | 2:-84083085 | MsG0280011443.01.T01:intron |
| ACATTTCGCGAGCCGACAAA+AGG | 0.460184 | 2:-84082677 | MsG0280011443.01.T01:CDS |
| CACGATTCCACTGCCTAAGA+AGG | 0.465950 | 2:-84081908 | MsG0280011443.01.T01:CDS |
| TCAGATTGAAGTACAAATCA+AGG | 0.469530 | 2:-84082478 | MsG0280011443.01.T01:CDS |
| AAATTATTCAGCTTTGACTC+AGG | 0.479176 | 2:+84082453 | None:intergenic |
| GTAAAGCTGTTTAGGACCCT+GGG | 0.479502 | 2:-84081613 | MsG0280011443.01.T01:CDS |
| ATGGAACACACTCAGATGCT+TGG | 0.482211 | 2:-84084247 | MsG0280011443.01.T01:CDS |
| AAATACTGAAAATTCTTTGG+AGG | 0.482682 | 2:-84081749 | MsG0280011443.01.T01:CDS |
| GGGTTTGTACATAAAGTCTC+TGG | 0.483752 | 2:-84081593 | MsG0280011443.01.T01:CDS |
| TGGAACACACTCAGATGCTT+GGG | 0.484164 | 2:-84084246 | MsG0280011443.01.T01:CDS |
| TGTAAAGCTGTTTAGGACCC+TGG | 0.484740 | 2:-84081614 | MsG0280011443.01.T01:CDS |
| AATCATTTGAGGAATGCAAC+GGG | 0.489095 | 2:-84082895 | MsG0280011443.01.T01:CDS |
| AGTGTTTGAAGCAAAGGAAG+AGG | 0.504885 | 2:-84082574 | MsG0280011443.01.T01:CDS |
| GAATTATCAGCTGATTTGCC+TGG | 0.507013 | 2:+84082956 | None:intergenic |
| TGTTGGTTGCATTTGCCTGT+TGG | 0.507831 | 2:+84084269 | None:intergenic |
| GCAACAGTTTATGAGCCAAC+AGG | 0.508304 | 2:-84084284 | None:intergenic |
| AGCCAAGTGGGGTGATTGGA+AGG | 0.517904 | 2:-84083257 | MsG0280011443.01.T01:CDS |
| TTGAATATGAATAAAAGGCC+AGG | 0.518437 | 2:-84082974 | MsG0280011443.01.T01:CDS |
| CTTCTTAGGCAGTGGAATCG+TGG | 0.525924 | 2:+84081909 | None:intergenic |
| CTGATTTGCAGCAATCACAT+AGG | 0.539868 | 2:-84084207 | MsG0280011443.01.T01:intron |
| CACGAACTGGACAGCCAAGT+GGG | 0.540252 | 2:-84083269 | MsG0280011443.01.T01:CDS |
| AGGATTTGAAAGAAGAGTGA+AGG | 0.548231 | 2:-84082637 | MsG0280011443.01.T01:CDS |
| AAATAGAAGAGTGGCGATTG+TGG | 0.559419 | 2:-84082865 | MsG0280011443.01.T01:CDS |
| CATCTGAGTGTGTTCCATGT+TGG | 0.565465 | 2:+84084252 | None:intergenic |
| GAAGGAGTTCCAGTCAAAAG+AGG | 0.567276 | 2:-84082619 | MsG0280011443.01.T01:CDS |
| AGTGAAAGTGTTTGAAGCAA+AGG | 0.574401 | 2:-84082580 | MsG0280011443.01.T01:CDS |
| TTTCTTAACAGAAAATTCCA+AGG | 0.575654 | 2:+84083051 | None:intergenic |
| AAATCATTTGAGGAATGCAA+CGG | 0.576495 | 2:-84082896 | MsG0280011443.01.T01:CDS |
| ACGATTCCACTGCCTAAGAA+GGG | 0.594525 | 2:-84081907 | MsG0280011443.01.T01:CDS |
| GAGACTTTATGTACAAACCC+AGG | 0.598321 | 2:+84081596 | None:intergenic |
| ATATGCAGATACATCTAACA+TGG | 0.600498 | 2:-84082043 | MsG0280011443.01.T01:intron |
| ACAGGCAAATGCAACCAACA+TGG | 0.621822 | 2:-84084266 | MsG0280011443.01.T01:CDS |
| GGAGTTCCAGTCAAAAGAGG+AGG | 0.625446 | 2:-84082616 | MsG0280011443.01.T01:CDS |
| GCAAAGGAAGAGGAATTCGA+AGG | 0.634363 | 2:-84082564 | MsG0280011443.01.T01:CDS |
| CACCATTGATGGAACAAGTG+AGG | 0.634662 | 2:-84082004 | MsG0280011443.01.T01:CDS |
| TGCAAGTTCTTTCCTCAGCG+AGG | 0.638740 | 2:+84082928 | None:intergenic |
| GGAATCAACAAATAGAAGAG+TGG | 0.642926 | 2:-84082874 | MsG0280011443.01.T01:CDS |
| AGACTTTATGTACAAACCCA+GGG | 0.657269 | 2:+84081597 | None:intergenic |
| GCAATTTGAAAACCAAGCTG+AGG | 0.662165 | 2:-84082532 | MsG0280011443.01.T01:CDS |
| AAATCAGCAACATTATTCTG+TGG | 0.667333 | 2:+84084223 | None:intergenic |
| TCTTAGGCAGTGGAATCGTG+GGG | 0.670339 | 2:+84081911 | None:intergenic |
| ACGAACTGGACAGCCAAGTG+GGG | 0.676348 | 2:-84083268 | MsG0280011443.01.T01:CDS |
| GCACGAACTGGACAGCCAAG+TGG | 0.680778 | 2:-84083270 | MsG0280011443.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACATATATATTATGATAAA+CGG | + | Chr2:84082548-84082567 | None:intergenic | 10.0% |
| !! | TATATATGTTATAGATTATT+TGG | - | Chr2:84082558-84082577 | MsG0280011443.01.T01:CDS | 10.0% |
| !! | AGAAAATACTGAAAATTCTT+TGG | - | Chr2:84084107-84084126 | MsG0280011443.01.T01:intron | 20.0% |
| !! | ATTGTTGAAAAAATCATTTG+AGG | - | Chr2:84082953-84082972 | MsG0280011443.01.T01:CDS | 20.0% |
| !! | TAAATTCTGTAGTTAAATGA+TGG | - | Chr2:84082696-84082715 | MsG0280011443.01.T01:intron | 20.0% |
| !! | TACACAATCAATTGAAATTA+TGG | - | Chr2:84081826-84081845 | MsG0280011443.01.T01:CDS | 20.0% |
| !!! | ATTTTCTGTTAAGAAATCAA+AGG | - | Chr2:84082815-84082834 | MsG0280011443.01.T01:CDS | 20.0% |
| !!! | TTAATGATGGAAAAAATTGA+AGG | + | Chr2:84082493-84082512 | None:intergenic | 20.0% |
| ! | AAATACTGAAAATTCTTTGG+AGG | - | Chr2:84084110-84084129 | MsG0280011443.01.T01:intron | 25.0% |
| ! | AAATGAAGAAGATGATTATC+AGG | + | Chr2:84082418-84082437 | None:intergenic | 25.0% |
| ! | AAATGAGCTTGAATCAAAAA+GGG | - | Chr2:84083117-84083136 | MsG0280011443.01.T01:intron | 25.0% |
| ! | AAATTGAGGCATAGATAAAA+CGG | - | Chr2:84082218-84082237 | MsG0280011443.01.T01:intron | 25.0% |
| ! | AAGGATAAACATTCGATAAA+TGG | + | Chr2:84082474-84082493 | None:intergenic | 25.0% |
| ! | ACATAAGCAACAAAAATTGA+AGG | + | Chr2:84083760-84083779 | None:intergenic | 25.0% |
| ! | AGCAAAGAAAAAAAGATCTA+CGG | - | Chr2:84081972-84081991 | MsG0280011443.01.T01:CDS | 25.0% |
| ! | AGGAATTTGAATCAAAAGAA+AGG | - | Chr2:84083202-84083221 | MsG0280011443.01.T01:intron | 25.0% |
| ! | ATAGAAACTTAGTGAATCAT+TGG | + | Chr2:84083660-84083679 | None:intergenic | 25.0% |
| ! | CAATCAGATAGCATATAATA+GGG | - | Chr2:84082341-84082360 | MsG0280011443.01.T01:intron | 25.0% |
| ! | CTTACACAAGATTTAATATC+TGG | + | Chr2:84084042-84084061 | None:intergenic | 25.0% |
| ! | CTTCGTTGAATATGAATAAA+AGG | - | Chr2:84082880-84082899 | MsG0280011443.01.T01:CDS | 25.0% |
| ! | CTTCTCAATATTTCTCTTTA+TGG | + | Chr2:84083021-84083040 | None:intergenic | 25.0% |
| ! | GTCTGAAAAAATATACTTGA+TGG | - | Chr2:84083088-84083107 | MsG0280011443.01.T01:intron | 25.0% |
| ! | TAAATGAGCTTGAATCAAAA+AGG | - | Chr2:84083116-84083135 | MsG0280011443.01.T01:intron | 25.0% |
| ! | TACGATGAAGAAAAAGAATT+TGG | - | Chr2:84083469-84083488 | MsG0280011443.01.T01:intron | 25.0% |
| ! | TCAATCAGATAGCATATAAT+AGG | - | Chr2:84082340-84082359 | MsG0280011443.01.T01:intron | 25.0% |
| ! | TTATAGCCAAAACTACAAAT+AGG | + | Chr2:84083615-84083634 | None:intergenic | 25.0% |
| ! | TTATCAGGATTTAAAGAAAC+AGG | + | Chr2:84082403-84082422 | None:intergenic | 25.0% |
| ! | TTTCAATGTTAAAGGTAGAA+CGG | - | Chr2:84082158-84082177 | MsG0280011443.01.T01:intron | 25.0% |
| ! | TTTCTTAACAGAAAATTCCA+AGG | + | Chr2:84082811-84082830 | None:intergenic | 25.0% |
| !! | AATAGTCCTATTTGTAGTTT+TGG | - | Chr2:84083606-84083625 | MsG0280011443.01.T01:intron | 25.0% |
| !! | ATATATACTATGAAAGCATG+TGG | + | Chr2:84083717-84083736 | None:intergenic | 25.0% |
| !! | CTTTATTTCTTCAGTGAATA+AGG | - | Chr2:84082662-84082681 | MsG0280011443.01.T01:CDS | 25.0% |
| !! | CTTTTATTCATATTCAACGA+AGG | + | Chr2:84082882-84082901 | None:intergenic | 25.0% |
| !! | TCATTTCAACAACACTTTTA+TGG | - | Chr2:84083527-84083546 | MsG0280011443.01.T01:intron | 25.0% |
| !! | TTCTGATCTTTGTTTATTAG+AGG | + | Chr2:84081998-84082017 | None:intergenic | 25.0% |
| !! | TTGATTCAAATTCCTTTTGT+CGG | + | Chr2:84083197-84083216 | None:intergenic | 25.0% |
| !! | TTTCCATCATTAATGCTTTT+GGG | - | Chr2:84082500-84082519 | MsG0280011443.01.T01:CDS | 25.0% |
| !! | TTTTCCATCATTAATGCTTT+TGG | - | Chr2:84082499-84082518 | MsG0280011443.01.T01:CDS | 25.0% |
| !!! | GTAACATTTTAGTTATTGCA+AGG | - | Chr2:84082053-84082072 | MsG0280011443.01.T01:intron | 25.0% |
| AAATCAGCAACATTATTCTG+TGG | + | Chr2:84081639-84081658 | None:intergenic | 30.0% | |
| AAATCATTTGAGGAATGCAA+CGG | - | Chr2:84082963-84082982 | MsG0280011443.01.T01:CDS | 30.0% | |
| AACCACTGTTTCAATGTTAA+AGG | - | Chr2:84082150-84082169 | MsG0280011443.01.T01:intron | 30.0% | |
| AATTTACCGAAATAGGTCTA+GGG | - | Chr2:84082092-84082111 | MsG0280011443.01.T01:intron | 30.0% | |
| ATAAAAACCCTGTTATATGC+TGG | + | Chr2:84082295-84082314 | None:intergenic | 30.0% | |
| ATAAGAGAAAAATCAAGTCG+TGG | - | Chr2:84082127-84082146 | MsG0280011443.01.T01:intron | 30.0% | |
| ATATGCAGATACATCTAACA+TGG | - | Chr2:84083816-84083835 | MsG0280011443.01.T01:intron | 30.0% | |
| ATCAAAAAGGGTGAATTTGA+TGG | - | Chr2:84083129-84083148 | MsG0280011443.01.T01:intron | 30.0% | |
| ATTATGATAAACGGTACAAC+AGG | + | Chr2:84082539-84082558 | None:intergenic | 30.0% | |
| CAAAAATTGAAGGTGACAAT+AGG | + | Chr2:84083750-84083769 | None:intergenic | 30.0% | |
| CAAATGCAATTTACCGAAAT+AGG | - | Chr2:84082085-84082104 | MsG0280011443.01.T01:intron | 30.0% | |
| CTACTACATTGGATCATTTA+GGG | - | Chr2:84081881-84081900 | MsG0280011443.01.T01:CDS | 30.0% | |
| TAATGCTTCTGTTTAGAAGA+TGG | - | Chr2:84082723-84082742 | MsG0280011443.01.T01:intron | 30.0% | |
| TACCTTTAACATTGAAACAG+TGG | + | Chr2:84082155-84082174 | None:intergenic | 30.0% | |
| TATGTGTGTGATATAGAAAC+TGG | + | Chr2:84083587-84083606 | None:intergenic | 30.0% | |
| TCAAAAGAGGAGGAATTTAA+AGG | - | Chr2:84083253-84083272 | MsG0280011443.01.T01:CDS | 30.0% | |
| TCAGATTGAAGTACAAATCA+AGG | - | Chr2:84083381-84083400 | MsG0280011443.01.T01:intron | 30.0% | |
| TTATGATAAACGGTACAACA+GGG | + | Chr2:84082538-84082557 | None:intergenic | 30.0% | |
| TTGAATATGAATAAAAGGCC+AGG | - | Chr2:84082885-84082904 | MsG0280011443.01.T01:CDS | 30.0% | |
| ! | AAATTATTCAGCTTTGACTC+AGG | + | Chr2:84083409-84083428 | None:intergenic | 30.0% |
| ! | ATATCCAAAACAAGTTTTGC+TGG | + | Chr2:84083919-84083938 | None:intergenic | 30.0% |
| ! | CAATCTGATTCTCTTTTAAC+TGG | + | Chr2:84083369-84083388 | None:intergenic | 30.0% |
| ! | GAGTCAAAGCTGAATAATTT+TGG | - | Chr2:84083409-84083428 | MsG0280011443.01.T01:intron | 30.0% |
| ! | TATAACAGGGTTTTTATCGA+TGG | - | Chr2:84082298-84082317 | MsG0280011443.01.T01:intron | 30.0% |
| ! | TCAAAGCTGAATAATTTTGG+TGG | - | Chr2:84083412-84083431 | MsG0280011443.01.T01:intron | 30.0% |
| ! | TCATTTAGGGTTAGATTTGT+AGG | - | Chr2:84081894-84081913 | MsG0280011443.01.T01:CDS | 30.0% |
| !! | ATTCCCAAAAGCATTAATGA+TGG | + | Chr2:84082506-84082525 | None:intergenic | 30.0% |
| !! | TAATTTTGGTGGACAACTAA+AGG | - | Chr2:84083423-84083442 | MsG0280011443.01.T01:intron | 30.0% |
| !! | TTAATGCTTTTGGGAATATG+CGG | - | Chr2:84082509-84082528 | MsG0280011443.01.T01:CDS | 30.0% |
| !!! | CAGAGGTAGTCATATTTTTT+GGG | - | Chr2:84081852-84081871 | MsG0280011443.01.T01:CDS | 30.0% |
| !!! | CTGATGATTTTGTCGATTTA+TGG | - | Chr2:84084144-84084163 | MsG0280011443.01.T01:intron | 30.0% |
| AAATAAGGAGACCCAAGTTA+AGG | - | Chr2:84083058-84083077 | MsG0280011443.01.T01:CDS | 35.0% | |
| AATCATTTGAGGAATGCAAC+GGG | - | Chr2:84082964-84082983 | MsG0280011443.01.T01:CDS | 35.0% | |
| AATGATCCAATGTAGTAGGT+AGG | + | Chr2:84081879-84081898 | None:intergenic | 35.0% | |
| AATTGAAATTATGGCTCCAG+AGG | - | Chr2:84081835-84081854 | MsG0280011443.01.T01:CDS | 35.0% | |
| ACTTCGTCAAGCAAGTAATT+TGG | - | Chr2:84081800-84081819 | MsG0280011443.01.T01:CDS | 35.0% | |
| ACTTGTGATGAGATATGCAT+CGG | - | Chr2:84081703-84081722 | MsG0280011443.01.T01:CDS | 35.0% | |
| AGACTCAAGTTCCTTAACTT+GGG | + | Chr2:84083072-84083091 | None:intergenic | 35.0% | |
| AGACTTTATGTACAAACCCA+GGG | + | Chr2:84084265-84084284 | None:intergenic | 35.0% | |
| AGATAGCTGTAAAGCTGTTT+AGG | - | Chr2:84084238-84084257 | MsG0280011443.01.T01:CDS | 35.0% | |
| AGATTTGTAGGTTGTGAAAG+CGG | - | Chr2:84081906-84081925 | MsG0280011443.01.T01:CDS | 35.0% | |
| AGGATTTGAAAGAAGAGTGA+AGG | - | Chr2:84083222-84083241 | MsG0280011443.01.T01:intron | 35.0% | |
| AGTGCAAAAATCAAGGTTCA+CGG | + | Chr2:84082377-84082396 | None:intergenic | 35.0% | |
| ATGCATATCTCATCACAAGT+TGG | + | Chr2:84081703-84081722 | None:intergenic | 35.0% | |
| ATTTGACAGCAACAATTCCT+TGG | - | Chr2:84082774-84082793 | MsG0280011443.01.T01:intron | 35.0% | |
| CAATTCAGTATCACCATTGA+TGG | - | Chr2:84083844-84083863 | MsG0280011443.01.T01:intron | 35.0% | |
| CAATTTACCGAAATAGGTCT+AGG | - | Chr2:84082091-84082110 | MsG0280011443.01.T01:intron | 35.0% | |
| CAGGATAAGTGCAAAAATCA+AGG | + | Chr2:84082384-84082403 | None:intergenic | 35.0% | |
| CCAAAAAATATGACTACCTC+TGG | + | Chr2:84081854-84081873 | None:intergenic | 35.0% | |
| CCTAAATGATCCAATGTAGT+AGG | + | Chr2:84081883-84081902 | None:intergenic | 35.0% | |
| CCTACTACATTGGATCATTT+AGG | - | Chr2:84081880-84081899 | MsG0280011443.01.T01:CDS | 35.0% | |
| CTGATTCAAAGTTTCTCACT+AGG | + | Chr2:84083155-84083174 | None:intergenic | 35.0% | |
| CTGCAAAGAGCTAGAAAATA+AGG | - | Chr2:84083043-84083062 | MsG0280011443.01.T01:CDS | 35.0% | |
| CTGTCAAATAACCTCTTAAC+TGG | + | Chr2:84082763-84082782 | None:intergenic | 35.0% | |
| CTTCGTCAAGCAAGTAATTT+GGG | - | Chr2:84081801-84081820 | MsG0280011443.01.T01:CDS | 35.0% | |
| GAAGGAAGAAGTAGATCAAA+AGG | - | Chr2:84082620-84082639 | MsG0280011443.01.T01:CDS | 35.0% | |
| GGAATCAACAAATAGAAGAG+TGG | - | Chr2:84082985-84083004 | MsG0280011443.01.T01:CDS | 35.0% | |
| ! | ATAATTCATTTTCCTCGCTG+AGG | - | Chr2:84082919-84082938 | MsG0280011443.01.T01:CDS | 35.0% |
| ! | GAAAATTCTTTGGAGGTTCT+CGG | - | Chr2:84084117-84084136 | MsG0280011443.01.T01:intron | 35.0% |
| ! | TAAATTCCTCCTCTTTTGAC+TGG | + | Chr2:84083252-84083271 | None:intergenic | 35.0% |
| ! | TACTTGCTTGACGAAGTTTT+TGG | + | Chr2:84081797-84081816 | None:intergenic | 35.0% |
| !! | AGATCCAGCAAAACTTGTTT+TGG | - | Chr2:84083912-84083931 | MsG0280011443.01.T01:intron | 35.0% |
| !! | AGTGAAAGTGTTTGAAGCAA+AGG | - | Chr2:84083279-84083298 | MsG0280011443.01.T01:CDS | 35.0% |
| !! | GTTTTTCTAGCAGATAGATG+CGG | + | Chr2:84084005-84084024 | None:intergenic | 35.0% |
| !! | TTCTTTGCTTCGTTTTTCCT+GGG | + | Chr2:84081961-84081980 | None:intergenic | 35.0% |
| !! | TTTCTTTGCTTCGTTTTTCC+TGG | + | Chr2:84081962-84081981 | None:intergenic | 35.0% |
| !!! | CCAGAGGTAGTCATATTTTT+TGG | - | Chr2:84081851-84081870 | MsG0280011443.01.T01:CDS | 35.0% |
| AAATAGAAGAGTGGCGATTG+TGG | - | Chr2:84082994-84083013 | MsG0280011443.01.T01:CDS | 40.0% | |
| ACAGTGTTCCAGCATATAAC+AGG | - | Chr2:84082284-84082303 | MsG0280011443.01.T01:intron | 40.0% | |
| ATCAGCCTATTGCTGAAGTA+AGG | + | Chr2:84081732-84081751 | None:intergenic | 40.0% | |
| CAGACTCAAGTTCCTTAACT+TGG | + | Chr2:84083073-84083092 | None:intergenic | 40.0% | |
| CAGTGTTCCAGCATATAACA+GGG | - | Chr2:84082285-84082304 | MsG0280011443.01.T01:intron | 40.0% | |
| CTCTGATTCAGTTTCGAAGA+GGG | + | Chr2:84082186-84082205 | None:intergenic | 40.0% | |
| CTGAAACTTGAGACTGTGTT+TGG | + | Chr2:84082254-84082273 | None:intergenic | 40.0% | |
| CTTGTGATGAGATATGCATC+GGG | - | Chr2:84081704-84081723 | MsG0280011443.01.T01:CDS | 40.0% | |
| GAGACTTTATGTACAAACCC+AGG | + | Chr2:84084266-84084285 | None:intergenic | 40.0% | |
| GATGGAACAAGTGAGGAATT+TGG | - | Chr2:84083862-84083881 | MsG0280011443.01.T01:intron | 40.0% | |
| GCAATTTGAAAACCAAGCTG+AGG | - | Chr2:84083327-84083346 | MsG0280011443.01.T01:intron | 40.0% | |
| GGGTTTGTACATAAAGTCTC+TGG | - | Chr2:84084266-84084285 | MsG0280011443.01.T01:CDS | 40.0% | |
| TTCCTCACTTGTTCCATCAA+TGG | + | Chr2:84083860-84083879 | None:intergenic | 40.0% | |
| TTGGATTTAACAGCACGAAC+TGG | - | Chr2:84082577-84082596 | MsG0280011443.01.T01:CDS | 40.0% | |
| ! | AGTGTTTGAAGCAAAGGAAG+AGG | - | Chr2:84083285-84083304 | MsG0280011443.01.T01:CDS | 40.0% |
| ! | CTGATTTGCAGCAATCACAT+AGG | - | Chr2:84081652-84081671 | MsG0280011443.01.T01:CDS | 40.0% |
| !! | CTTGACGAAGTTTTTGGAAG+GGG | + | Chr2:84081791-84081810 | None:intergenic | 40.0% |
| !! | GAATTATCAGCTGATTTGCC+TGG | + | Chr2:84082906-84082925 | None:intergenic | 40.0% |
| !! | GCTTGACGAAGTTTTTGGAA+GGG | + | Chr2:84081792-84081811 | None:intergenic | 40.0% |
| !! | GTGAAAGCGGTAAGTTTTGA+AGG | - | Chr2:84081919-84081938 | MsG0280011443.01.T01:CDS | 40.0% |
| !! | TGCTTGACGAAGTTTTTGGA+AGG | + | Chr2:84081793-84081812 | None:intergenic | 40.0% |
| !!! | ACTGGACTAGCTTTTCAACT+TGG | + | Chr2:84083569-84083588 | None:intergenic | 40.0% |
| ACAGGCAAATGCAACCAACA+TGG | - | Chr2:84081593-84081612 | MsG0280011443.01.T01:CDS | 45.0% | |
| ACGATTCCACTGCCTAAGAA+GGG | - | Chr2:84083952-84083971 | MsG0280011443.01.T01:intron | 45.0% | |
| ATGGAACACACTCAGATGCT+TGG | - | Chr2:84081612-84081631 | MsG0280011443.01.T01:CDS | 45.0% | |
| CACCATTGATGGAACAAGTG+AGG | - | Chr2:84083855-84083874 | MsG0280011443.01.T01:intron | 45.0% | |
| CATCTGAGTGTGTTCCATGT+TGG | + | Chr2:84081610-84081629 | None:intergenic | 45.0% | |
| CCTCTGATTCAGTTTCGAAG+AGG | + | Chr2:84082187-84082206 | None:intergenic | 45.0% | |
| CCTCTTCGAAACTGAATCAG+AGG | - | Chr2:84082184-84082203 | MsG0280011443.01.T01:intron | 45.0% | |
| CCTTGGAAAGCAACATTCCT+TGG | - | Chr2:84082791-84082810 | MsG0280011443.01.T01:intron | 45.0% | |
| CTTCGAAACTGAATCAGAGG+CGG | - | Chr2:84082187-84082206 | MsG0280011443.01.T01:intron | 45.0% | |
| GAAGGAGTTCCAGTCAAAAG+AGG | - | Chr2:84083240-84083259 | MsG0280011443.01.T01:CDS | 45.0% | |
| GCAAAGGAAGAGGAATTCGA+AGG | - | Chr2:84083295-84083314 | MsG0280011443.01.T01:intron | 45.0% | |
| GGGTTCCTTACTTCAGCAAT+AGG | - | Chr2:84081724-84081743 | MsG0280011443.01.T01:CDS | 45.0% | |
| TGGAACACACTCAGATGCTT+GGG | - | Chr2:84081613-84081632 | MsG0280011443.01.T01:CDS | 45.0% | |
| TGTCCACCCTAGACCTATTT+CGG | + | Chr2:84082101-84082120 | None:intergenic | 45.0% | |
| TTACCGAAATAGGTCTAGGG+TGG | - | Chr2:84082095-84082114 | MsG0280011443.01.T01:intron | 45.0% | |
| TTCGAAACTGAATCAGAGGC+GGG | - | Chr2:84082188-84082207 | MsG0280011443.01.T01:intron | 45.0% | |
| TTCTTAGGCAGTGGAATCGT+GGG | + | Chr2:84083952-84083971 | None:intergenic | 45.0% | |
| TTGGGTCCTACCTACTACAT+TGG | - | Chr2:84081870-84081889 | MsG0280011443.01.T01:CDS | 45.0% | |
| ! | ACAGCTTTGTCTCCCTTCTT+AGG | + | Chr2:84083967-84083986 | None:intergenic | 45.0% |
| ! | GTAAAGCTGTTTAGGACCCT+GGG | - | Chr2:84084246-84084265 | MsG0280011443.01.T01:CDS | 45.0% |
| ! | TGTAAAGCTGTTTAGGACCC+TGG | - | Chr2:84084245-84084264 | MsG0280011443.01.T01:CDS | 45.0% |
| ! | TGTTGGTTGCATTTGCCTGT+TGG | + | Chr2:84081593-84081612 | None:intergenic | 45.0% |
| !! | CCAAGGAATGTTGCTTTCCA+AGG | + | Chr2:84082794-84082813 | None:intergenic | 45.0% |
| !! | CTTTGAGATTGTCCTCAGCT+TGG | + | Chr2:84083342-84083361 | None:intergenic | 45.0% |
| ACATTTCGCGAGCCGACAAA+AGG | - | Chr2:84083182-84083201 | MsG0280011443.01.T01:intron | 50.0% | |
| CACGATTCCACTGCCTAAGA+AGG | - | Chr2:84083951-84083970 | MsG0280011443.01.T01:intron | 50.0% | |
| CTACTGCACTGCCAGTTAAG+AGG | - | Chr2:84082749-84082768 | MsG0280011443.01.T01:intron | 50.0% | |
| CTTCTTAGGCAGTGGAATCG+TGG | + | Chr2:84083953-84083972 | None:intergenic | 50.0% | |
| GGAGTTCCAGTCAAAAGAGG+AGG | - | Chr2:84083243-84083262 | MsG0280011443.01.T01:CDS | 50.0% | |
| TCTTAGGCAGTGGAATCGTG+GGG | + | Chr2:84083951-84083970 | None:intergenic | 50.0% | |
| TGCAAGTTCTTTCCTCAGCG+AGG | + | Chr2:84082934-84082953 | None:intergenic | 50.0% | |
| TTATCGATGGCGACGATGTC+AGG | - | Chr2:84082311-84082330 | MsG0280011443.01.T01:intron | 50.0% | |
| TTCCTTCCAATCACCCCACT+TGG | + | Chr2:84082607-84082626 | None:intergenic | 50.0% | |
| TTGTCTCCCTTCTTAGGCAG+TGG | + | Chr2:84083961-84083980 | None:intergenic | 50.0% | |
| AAACTGAATCAGAGGCGGGC+AGG | - | Chr2:84082192-84082211 | MsG0280011443.01.T01:intron | 55.0% | |
| ACGAACTGGACAGCCAAGTG+GGG | - | Chr2:84082591-84082610 | MsG0280011443.01.T01:CDS | 55.0% | |
| AGCCAAGTGGGGTGATTGGA+AGG | - | Chr2:84082602-84082621 | MsG0280011443.01.T01:CDS | 55.0% | |
| AGGCGGGCAGGTCAAAATTG+AGG | - | Chr2:84082204-84082223 | MsG0280011443.01.T01:intron | 55.0% | |
| CACGAACTGGACAGCCAAGT+GGG | - | Chr2:84082590-84082609 | MsG0280011443.01.T01:CDS | 55.0% | |
| GTCGATGTTGAGTCAGTCCC+AGG | - | Chr2:84081941-84081960 | MsG0280011443.01.T01:CDS | 55.0% | |
| GCACGAACTGGACAGCCAAG+TGG | - | Chr2:84082589-84082608 | MsG0280011443.01.T01:CDS | 60.0% | |
| GGACAGCCAAGTGGGGTGAT+TGG | - | Chr2:84082598-84082617 | MsG0280011443.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 84081585 | 84084296 | 84081585 | ID=MsG0280011443.01;Name=MsG0280011443.01 |
| Chr2 | mRNA | 84081585 | 84084296 | 84081585 | ID=MsG0280011443.01.T01;Parent=MsG0280011443.01;Name=MsG0280011443.01.T01;_AED=0.49;_eAED=0.55;_QI=0|0|0|1|1|0.8|5|0|412 |
| Chr2 | exon | 84084208 | 84084296 | 84084208 | ID=MsG0280011443.01.T01:exon:3269;Parent=MsG0280011443.01.T01 |
| Chr2 | exon | 84083240 | 84083309 | 84083240 | ID=MsG0280011443.01.T01:exon:3268;Parent=MsG0280011443.01.T01 |
| Chr2 | exon | 84082808 | 84083098 | 84082808 | ID=MsG0280011443.01.T01:exon:3267;Parent=MsG0280011443.01.T01 |
| Chr2 | exon | 84082391 | 84082706 | 84082391 | ID=MsG0280011443.01.T01:exon:3266;Parent=MsG0280011443.01.T01 |
| Chr2 | exon | 84081585 | 84082057 | 84081585 | ID=MsG0280011443.01.T01:exon:3265;Parent=MsG0280011443.01.T01 |
| Chr2 | CDS | 84084208 | 84084296 | 84084208 | ID=MsG0280011443.01.T01:cds;Parent=MsG0280011443.01.T01 |
| Chr2 | CDS | 84083240 | 84083309 | 84083240 | ID=MsG0280011443.01.T01:cds;Parent=MsG0280011443.01.T01 |
| Chr2 | CDS | 84082808 | 84083098 | 84082808 | ID=MsG0280011443.01.T01:cds;Parent=MsG0280011443.01.T01 |
| Chr2 | CDS | 84082391 | 84082706 | 84082391 | ID=MsG0280011443.01.T01:cds;Parent=MsG0280011443.01.T01 |
| Chr2 | CDS | 84081585 | 84082057 | 84081585 | ID=MsG0280011443.01.T01:cds;Parent=MsG0280011443.01.T01 |
| Gene Sequence |
| Protein sequence |
