AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039984.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039984.01.T01 MTR_7g082910 98.529 340 5 0 1 340 1 340 0.0 691
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039984.01.T01 AT1G66680 68.436 358 95 3 1 340 1 358 1.75e-171 481

Find 119 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCATGAGTTTAGGTCTT+TGG 0.192323 7:+71482961 MsG0780039984.01.T01:three_prime_UTR
CATGACTAACATATTGAAAT+AGG 0.192349 7:-71482847 None:intergenic
ACCCTTGTTTAGCCAATTCT+TGG 0.227115 7:-71480204 None:intergenic
GGTTGAAACTTTCCACTTCT+TGG 0.231499 7:-71482760 None:intergenic
TTTCAACTTGTCATGGATAA+AGG 0.269862 7:+71482182 MsG0780039984.01.T01:CDS
TGCTGGGATTTCAGAGTTAC+TGG 0.276650 7:+71478691 MsG0780039984.01.T01:CDS
CCTAAACTCATGAAGGAAAA+AGG 0.292796 7:-71482954 None:intergenic
AAGTTTCCTCCCCTTTCATT+TGG 0.297563 7:+71483086 MsG0780039984.01.T01:three_prime_UTR
TCCGTGCCGCATCAGATTAC+AGG 0.314265 7:+71477179 MsG0780039984.01.T01:CDS
TCCTTGGCTACCTCAGGTTC+GGG 0.333703 7:-71482803 None:intergenic
CTCAGGTTCTCTGATTTAAC+TGG 0.345032 7:+71480862 MsG0780039984.01.T01:intron
AAAGGGACACTTGATGCTAT+TGG 0.345795 7:+71482200 MsG0780039984.01.T01:CDS
AGTTTCCTCCCCTTTCATTT+GGG 0.345851 7:+71483087 MsG0780039984.01.T01:three_prime_UTR
ATCCTTGGCTACCTCAGGTT+CGG 0.346206 7:-71482804 None:intergenic
TTCCGGCTGCAAACGAATTC+CGG 0.350662 7:-71476987 None:intergenic
AGACGCATGTGTATTACTTC+TGG 0.353878 7:+71483015 MsG0780039984.01.T01:three_prime_UTR
TTAACATCATCAACGTGATT+TGG 0.356995 7:-71480100 None:intergenic
CTTGTTCCAACTTTGTTTCA+AGG 0.368887 7:-71482157 None:intergenic
GAGTTTAGGTCTTTGGTGAA+TGG 0.382761 7:+71482968 MsG0780039984.01.T01:three_prime_UTR
CTTGACATTGGGACTGGAAA+TGG 0.388367 7:+71480172 MsG0780039984.01.T01:CDS
TGCGAGACGTCGGAGTCTTC+CGG 0.391309 7:-71477004 None:intergenic
TGGTTTGCTTCTCCAAGAAT+TGG 0.395304 7:+71480192 MsG0780039984.01.T01:CDS
AAGGCTTTGGGCAAGGTTGA+TGG 0.395865 7:-71480905 None:intergenic
AGTTTAGGTCTTTGGTGAAT+GGG 0.396722 7:+71482969 MsG0780039984.01.T01:three_prime_UTR
ATGACTAACATATTGAAATA+GGG 0.397158 7:-71482846 None:intergenic
AATGTAGTAGTAAAGGGAAA+AGG 0.403647 7:+71483142 MsG0780039984.01.T01:three_prime_UTR
GTTTCAAGGCTGGTTGCTCC+TGG 0.406301 7:+71482414 MsG0780039984.01.T01:CDS
TAAACAAATGTAGTAGTAAA+GGG 0.418838 7:+71483136 MsG0780039984.01.T01:three_prime_UTR
TTCAACTTGTCATGGATAAA+GGG 0.421552 7:+71482183 MsG0780039984.01.T01:CDS
CATCACGGTTAGCAAGGCTT+TGG 0.423854 7:-71480918 None:intergenic
ATCACGGTTAGCAAGGCTTT+GGG 0.424839 7:-71480917 None:intergenic
ATAAACAAATGTAGTAGTAA+AGG 0.434046 7:+71483135 MsG0780039984.01.T01:three_prime_UTR
TCTTTCTCTTACCTCTTGAC+AGG 0.438190 7:-71482239 None:intergenic
AGTAATTACAAATTAACAAT+GGG 0.442639 7:+71483217 MsG0780039984.01.T01:three_prime_UTR
TCATCATCCTTGGCTACCTC+AGG 0.447830 7:-71482809 None:intergenic
AAATCACGTTGATGATGTTA+AGG 0.448003 7:+71480102 MsG0780039984.01.T01:CDS
GTTGGAATGTACTTGACATT+GGG 0.464276 7:+71480161 MsG0780039984.01.T01:CDS
ATGGTCATGCTGGTGAAGTT+TGG 0.470442 7:+71478754 MsG0780039984.01.T01:CDS
TTGGGATTCTGTTTCAAGGC+TGG 0.471964 7:+71482404 MsG0780039984.01.T01:CDS
TACCTCTTGACAGGACCATC+AGG 0.473156 7:-71482230 None:intergenic
TGGTACTGATTATAGTGAAC+GGG 0.478126 7:+71480882 MsG0780039984.01.T01:CDS
ATGTAGTAGTAAAGGGAAAA+GGG 0.480227 7:+71483143 MsG0780039984.01.T01:three_prime_UTR
TGAGGCAGTTTCATCAATGC+TGG 0.480765 7:+71478674 MsG0780039984.01.T01:CDS
GGACCATGAGTCAGCGGCGA+TGG 0.482287 7:-71477077 None:intergenic
CTCCAAGAATTGGCTAAACA+AGG 0.487355 7:+71480202 MsG0780039984.01.T01:CDS
AGCTATTCACCCAAATGAAA+GGG 0.489879 7:-71483096 None:intergenic
CAAAGCCTTGCTAACCGTGA+TGG 0.494626 7:+71480919 MsG0780039984.01.T01:CDS
TGTATTGGGATTCTGTTTCA+AGG 0.498037 7:+71482400 MsG0780039984.01.T01:CDS
GAGCTTCAGCGGCGTCCGCA+TGG 0.498625 7:-71477141 None:intergenic
GTTCCATCGCCGCTGACTCA+TGG 0.501137 7:+71477074 MsG0780039984.01.T01:CDS
ACTACTTTGAACGCAGGAAA+GGG 0.508146 7:-71476871 None:intergenic
TATCCGACATTCATGTTTGG+TGG 0.508388 7:+71482878 MsG0780039984.01.T01:CDS
AGTGGCAACACGGGAGCCTA+CGG 0.508556 7:-71482903 None:intergenic
GGCCGGAATTCGTTTGCAGC+CGG 0.509839 7:+71476985 MsG0780039984.01.T01:CDS
TCTGCATGATTCATCATCCT+TGG 0.514098 7:-71482819 None:intergenic
CGAAACCACCCTCCGATGGC+CGG 0.514310 7:+71476968 MsG0780039984.01.T01:exon
AAAGCCTTGCTAACCGTGAT+GGG 0.519409 7:+71480920 MsG0780039984.01.T01:CDS
AGTTGGAATGTACTTGACAT+TGG 0.519442 7:+71480160 MsG0780039984.01.T01:CDS
ACAAGTGTTTCAACTTGTCA+TGG 0.520761 7:+71482175 MsG0780039984.01.T01:CDS
TGATGTCCTTGAAACAAAGT+TGG 0.520838 7:+71482151 MsG0780039984.01.T01:CDS
CAGCTATTCACCCAAATGAA+AGG 0.520895 7:-71483097 None:intergenic
CAGTAATTACAAATTAACAA+TGG 0.528924 7:+71483216 MsG0780039984.01.T01:three_prime_UTR
ACGTATCCGACATTCATGTT+TGG 0.531317 7:+71482875 MsG0780039984.01.T01:CDS
TGGTCCATCAAAAGCGAGTA+CGG 0.535490 7:+71477094 MsG0780039984.01.T01:CDS
TGATGGAAGTAGTTGCATCT+TGG 0.538960 7:+71480038 MsG0780039984.01.T01:CDS
TTTCATGAACATGGTCATGC+TGG 0.539843 7:+71478744 MsG0780039984.01.T01:CDS
TACTACTTTGAACGCAGGAA+AGG 0.543131 7:-71476872 None:intergenic
TGCAAACGAATTCCGGCCAT+CGG 0.544835 7:-71476980 None:intergenic
GGCGATGGAACGGTCGTCGT+CGG 0.546266 7:-71477062 None:intergenic
AATGTACTTGACATTGGGAC+TGG 0.547470 7:+71480166 MsG0780039984.01.T01:CDS
TTGTGCATTGACATTTCTCA+AGG 0.550839 7:+71480070 MsG0780039984.01.T01:CDS
TCAAGGCTGGTTGCTCCTGG+TGG 0.552752 7:+71482417 MsG0780039984.01.T01:CDS
GGTTAGCAAGGCTTTGGGCA+AGG 0.554260 7:-71480912 None:intergenic
AACGAATTCCGGCCATCGGA+GGG 0.554785 7:-71476976 None:intergenic
GAGGCAGTTTCATCAATGCT+GGG 0.556267 7:+71478675 MsG0780039984.01.T01:CDS
CCAAAGACCTAAACTCATGA+AGG 0.556376 7:-71482961 None:intergenic
TGGGGTGCAATTAGTAAAGC+CGG 0.557291 7:+71476801 None:intergenic
CCTTGGCTACCTCAGGTTCG+GGG 0.570901 7:-71482802 None:intergenic
TGACTAACATATTGAAATAG+GGG 0.572139 7:-71482845 None:intergenic
AAATGCCACAGTGGCAACAC+GGG 0.573969 7:-71482912 None:intergenic
ATGAGTCAGCGGCGATGGAA+CGG 0.575371 7:-71477072 None:intergenic
ACCTGTAATCTGATGCGGCA+CGG 0.580581 7:-71477180 None:intergenic
TTCATGTTTGGTGGATCCGT+AGG 0.581735 7:+71482887 MsG0780039984.01.T01:CDS
GAAACCCATCACGGTTAGCA+AGG 0.585736 7:-71480924 None:intergenic
GGATGAGTTAGTCCAAGAAG+TGG 0.588080 7:+71482748 MsG0780039984.01.T01:CDS
AGTAGTTGCATCTTGGACAA+AGG 0.588242 7:+71480045 MsG0780039984.01.T01:CDS
CCCCGAACCTGAGGTAGCCA+AGG 0.591508 7:+71482802 MsG0780039984.01.T01:CDS
GCTATTGGATTGCATCCTGA+TGG 0.592164 7:+71482215 MsG0780039984.01.T01:CDS
AAACGAATTCCGGCCATCGG+AGG 0.592821 7:-71476977 None:intergenic
GATGATGTTAAGGCTGATGC+TGG 0.596248 7:+71480112 MsG0780039984.01.T01:CDS
CTGGTACTGATTATAGTGAA+CGG 0.599561 7:+71480881 MsG0780039984.01.T01:CDS
GTGGTTTCGTTACTATGCGG+TGG 0.602073 7:-71476954 None:intergenic
GTAACGAAACCACCCTCCGA+TGG 0.609274 7:+71476964 MsG0780039984.01.T01:exon
GAAATGCCACAGTGGCAACA+CGG 0.613085 7:-71482913 None:intergenic
CTTGGCTACCTCAGGTTCGG+GGG 0.614779 7:-71482801 None:intergenic
CAAGGATGAATCTGATGCTG+AGG 0.616035 7:+71478656 MsG0780039984.01.T01:CDS
GCTGGGATTTCAGAGTTACT+GGG 0.620796 7:+71478692 MsG0780039984.01.T01:CDS
TCGCGCTTGTTGCGAGACGT+CGG 0.621027 7:-71477014 None:intergenic
ACTTTGAACGCAGGAAAGGG+TGG 0.626766 7:-71476868 None:intergenic
GACGTTAGAGAGAGCTTCAG+CGG 0.629096 7:-71477152 None:intergenic
TCCAAGAATTGGCTAAACAA+GGG 0.634283 7:+71480203 MsG0780039984.01.T01:CDS
ATCCTGATGGTCCTGTCAAG+AGG 0.635234 7:+71482228 MsG0780039984.01.T01:CDS
GAATTCCGGCCATCGGAGGG+TGG 0.635739 7:-71476973 None:intergenic
ACTAGTACTACTTTGAACGC+AGG 0.636908 7:-71476877 None:intergenic
AGGCTCCCGTGTTGCCACTG+TGG 0.638681 7:+71482907 MsG0780039984.01.T01:CDS
GATCCACCAAACATGAATGT+CGG 0.646069 7:-71482881 None:intergenic
CACATCATGTAACAGTACAA+AGG 0.646819 7:+71482727 MsG0780039984.01.T01:CDS
TGATGTTGGGAAACCCATCA+CGG 0.647034 7:-71480933 None:intergenic
TAGGTTCGGAGATAATGTGA+TGG 0.650998 7:+71480021 MsG0780039984.01.T01:intron
GTGTGTGTGCAGTTCTGACA+AGG 0.656277 7:+71478638 MsG0780039984.01.T01:intron
ATGGAACCTGTAATCTGATG+CGG 0.661523 7:-71477185 None:intergenic
GCTATTCACCCAAATGAAAG+GGG 0.664637 7:-71483095 None:intergenic
ATTCACCCAAATGAAAGGGG+AGG 0.665174 7:-71483092 None:intergenic
TTTGATGGACCATGAGTCAG+CGG 0.681585 7:-71477083 None:intergenic
GTACTTACAAGTATTCCACC+AGG 0.693670 7:-71482432 None:intergenic
CGATGACGATCAACGCCATG+CGG 0.719168 7:+71477126 MsG0780039984.01.T01:CDS
AGGGTGGTTTCGTTACTATG+CGG 0.739620 7:-71476957 None:intergenic
TGTAATCTGATGCGGCACGG+AGG 0.752137 7:-71477177 None:intergenic
AAAGGGCAGTTAGTTCAGTG+AGG 0.757553 7:+71483160 MsG0780039984.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAATTGACT+AGG + Chr7:71479213-71479232 MsG0780039984.01.T01:intron 10.0%
!! ACAAATAAGAAAAATATTTA+CGG - Chr7:71483059-71483078 None:intergenic 10.0%
!! CTAGTAATAATTTAATAAAA+GGG - Chr7:71479500-71479519 None:intergenic 10.0%
!! TAGTAATAATTTAATAAAAG+GGG - Chr7:71479499-71479518 None:intergenic 10.0%
!! TTAAAAATAATGTTAGATTT+AGG + Chr7:71482496-71482515 MsG0780039984.01.T01:intron 10.0%
!!! CATAAATACATTTATAATTT+TGG - Chr7:71477790-71477809 None:intergenic 10.0%
!!! TTATTAAAATTAAAAGTGTT+TGG + Chr7:71477626-71477645 MsG0780039984.01.T01:intron 10.0%
!! AATTAAGAAAAGGTTAAAAT+TGG + Chr7:71478199-71478218 MsG0780039984.01.T01:intron 15.0%
!! AGTAATAATTTAATAAAAGG+GGG - Chr7:71479498-71479517 None:intergenic 15.0%
!! AGTAATTACAAATTAACAAT+GGG + Chr7:71483217-71483236 MsG0780039984.01.T01:three_prime_UTR 15.0%
!! ATAATGTTATGTTACAAAAA+AGG + Chr7:71479574-71479593 MsG0780039984.01.T01:intron 15.0%
!! CCTAGTAATAATTTAATAAA+AGG - Chr7:71479501-71479520 None:intergenic 15.0%
!! GTATACTATAGATATAATTA+TGG - Chr7:71479695-71479714 None:intergenic 15.0%
!! TAACTATAAAATGACATAAA+AGG + Chr7:71477674-71477693 MsG0780039984.01.T01:intron 15.0%
!! TAATGTTATGTTACAAAAAA+GGG + Chr7:71479575-71479594 MsG0780039984.01.T01:intron 15.0%
!! TGACAATATAATATTAACTT+TGG - Chr7:71482476-71482495 None:intergenic 15.0%
!!! AATTTAGAATTTACGTTTTA+GGG + Chr7:71477499-71477518 MsG0780039984.01.T01:intron 15.0%
!!! ACGTTTATTTAACTATTTTA+AGG + Chr7:71482124-71482143 MsG0780039984.01.T01:intron 15.0%
!!! CCTTTTATTAAATTATTACT+AGG + Chr7:71479498-71479517 MsG0780039984.01.T01:intron 15.0%
!!! GAAAATATTACTGATTATAT+AGG - Chr7:71477984-71478003 None:intergenic 15.0%
!!! TATAATATTATTGTTTTCCT+AGG + Chr7:71480715-71480734 MsG0780039984.01.T01:intron 15.0%
!!! TTTCTTCATTTTATATATTC+AGG - Chr7:71480627-71480646 None:intergenic 15.0%
!! AAAACTAAGAAATCTTATGT+GGG - Chr7:71479746-71479765 None:intergenic 20.0%
!! AAAAGTTAAAACAATGTCAA+AGG - Chr7:71481938-71481957 None:intergenic 20.0%
!! ATAAAACGTAAGTTTAGAAA+GGG - Chr7:71481850-71481869 None:intergenic 20.0%
!! ATAAACAAATGTAGTAGTAA+AGG + Chr7:71483135-71483154 MsG0780039984.01.T01:three_prime_UTR 20.0%
!! ATGACTAACATATTGAAATA+GGG - Chr7:71482849-71482868 None:intergenic 20.0%
!! ATTTCTTCTGTAATGAATAA+TGG - Chr7:71482592-71482611 None:intergenic 20.0%
!! CAGTAATTACAAATTAACAA+TGG + Chr7:71483216-71483235 MsG0780039984.01.T01:three_prime_UTR 20.0%
!! CCCTAAAATTAAAAACATAA+CGG - Chr7:71477342-71477361 None:intergenic 20.0%
!! GATTATTTAACATAAGCAAA+TGG + Chr7:71479336-71479355 MsG0780039984.01.T01:intron 20.0%
!! TAAAACTAAGAAATCTTATG+TGG - Chr7:71479747-71479766 None:intergenic 20.0%
!! TAAACAAATGTAGTAGTAAA+GGG + Chr7:71483136-71483155 MsG0780039984.01.T01:three_prime_UTR 20.0%
!! TATAAAACGTAAGTTTAGAA+AGG - Chr7:71481851-71481870 None:intergenic 20.0%
!! TATAATATTAACTTTGGACA+AGG - Chr7:71482470-71482489 None:intergenic 20.0%
!! TATGTCATTACAAAGAAATA+GGG + Chr7:71478046-71478065 MsG0780039984.01.T01:intron 20.0%
!!! ACCGTTATGTTTTTAATTTT+AGG + Chr7:71477338-71477357 MsG0780039984.01.T01:intron 20.0%
!!! ATTTGTTTTCTATTTATGCA+GGG - Chr7:71481568-71481587 None:intergenic 20.0%
!!! CCGTTATGTTTTTAATTTTA+GGG + Chr7:71477339-71477358 MsG0780039984.01.T01:intron 20.0%
!!! CGTTATGTTTTTAATTTTAG+GGG + Chr7:71477340-71477359 MsG0780039984.01.T01:intron 20.0%
!!! GAATTTAGAATTTACGTTTT+AGG + Chr7:71477498-71477517 MsG0780039984.01.T01:intron 20.0%
!!! TATTTTCAGAATGATGTATT+GGG + Chr7:71482386-71482405 MsG0780039984.01.T01:intron 20.0%
!!! TCTAAACTTACGTTTTATAT+TGG + Chr7:71481852-71481871 MsG0780039984.01.T01:intron 20.0%
!!! TTATTTTCAGAATGATGTAT+TGG + Chr7:71482385-71482404 MsG0780039984.01.T01:intron 20.0%
! AAGATCAATTAAAAAGATCG+AGG - Chr7:71481433-71481452 None:intergenic 25.0%
! ACATACCAAAAATTTGATGT+TGG - Chr7:71480950-71480969 None:intergenic 25.0%
! ACCACCTTACATAATAAAAA+GGG - Chr7:71482707-71482726 None:intergenic 25.0%
! AGAAAGAACTATCTTATTCA+TGG + Chr7:71482255-71482274 MsG0780039984.01.T01:intron 25.0%
! ATCGTATATTACCAACAATA+TGG - Chr7:71480247-71480266 None:intergenic 25.0%
! ATTTAACATAAGCAAATGGT+TGG + Chr7:71479340-71479359 MsG0780039984.01.T01:intron 25.0%
! CAACATAACATTATGTTGAA+AGG - Chr7:71479526-71479545 None:intergenic 25.0%
! CATACCAAAAATTTGATGTT+GGG - Chr7:71480949-71480968 None:intergenic 25.0%
! CATGACTAACATATTGAAAT+AGG - Chr7:71482850-71482869 None:intergenic 25.0%
! CTATGTCATTACAAAGAAAT+AGG + Chr7:71478045-71478064 MsG0780039984.01.T01:intron 25.0%
! CTGTTCTATACTTAGTAATT+AGG - Chr7:71478078-71478097 None:intergenic 25.0%
! GAAAATTTAAAAAGCCAACA+TGG + Chr7:71478114-71478133 MsG0780039984.01.T01:intron 25.0%
! GGTTTATATTTGATGTTGAT+TGG + Chr7:71477438-71477457 MsG0780039984.01.T01:intron 25.0%
! TAATTGAGGTAAATTCAAAG+TGG + Chr7:71479831-71479850 MsG0780039984.01.T01:intron 25.0%
! TGACAAATGAACATTTATTG+TGG + Chr7:71479885-71479904 MsG0780039984.01.T01:intron 25.0%
! TGACTAACATATTGAAATAG+GGG - Chr7:71482848-71482867 None:intergenic 25.0%
! TGGGAAATAAATGAATAACA+TGG - Chr7:71482321-71482340 None:intergenic 25.0%
! TTATTCATTTATTTCCCACT+TGG + Chr7:71482323-71482342 MsG0780039984.01.T01:intron 25.0%
! TTATTGAGAATAGTAACTAC+TGG + Chr7:71481668-71481687 MsG0780039984.01.T01:intron 25.0%
! TTGAATTTACCTCAATTACA+GGG - Chr7:71479829-71479848 None:intergenic 25.0%
! TTTGAATTTACCTCAATTAC+AGG - Chr7:71479830-71479849 None:intergenic 25.0%
!! AATGATATTCAAAAGGCATA+GGG - Chr7:71481640-71481659 None:intergenic 25.0%
!! ATGATAAACTTTTGTCTAGT+TGG + Chr7:71480143-71480162 MsG0780039984.01.T01:CDS 25.0%
!! CTTACAAATTTTCATGAACA+TGG + Chr7:71478735-71478754 MsG0780039984.01.T01:CDS 25.0%
!! GCTTTTAATCTTCATTTACT+AGG + Chr7:71478991-71479010 MsG0780039984.01.T01:intron 25.0%
!! TATTTTTCTGCTATCAACAA+TGG + Chr7:71479163-71479182 MsG0780039984.01.T01:intron 25.0%
!! TCACTGATCTTTATGATTTT+CGG + Chr7:71478814-71478833 MsG0780039984.01.T01:intron 25.0%
!! TTGGACATAAATTTTTGTGT+AGG - Chr7:71480316-71480335 None:intergenic 25.0%
!!! AATTGTAGCTTTGTGAATTT+TGG + Chr7:71477476-71477495 MsG0780039984.01.T01:intron 25.0%
!!! ACCTTTTTGTTTTGTTTTTG+CGG + Chr7:71481160-71481179 MsG0780039984.01.T01:intron 25.0%
!!! ATTGTTGATAGCAGAAAAAT+AGG - Chr7:71479164-71479183 None:intergenic 25.0%
!!! GATTTGTTTTCTATTTATGC+AGG - Chr7:71481569-71481588 None:intergenic 25.0%
!!! TATATTTGGTGTAAAAGTCA+TGG + Chr7:71481312-71481331 MsG0780039984.01.T01:intron 25.0%
!!! TTGATGAATTTTTCAGAATC+AGG + Chr7:71479403-71479422 MsG0780039984.01.T01:intron 25.0%
!!! TTTTAATTTTAGGGGAATTG+AGG + Chr7:71477348-71477367 MsG0780039984.01.T01:intron 25.0%
AAGATCTAAAGACTGAACAA+GGG - Chr7:71480751-71480770 None:intergenic 30.0%
AATGTAGTAGTAAAGGGAAA+AGG + Chr7:71483142-71483161 MsG0780039984.01.T01:three_prime_UTR 30.0%
AATTAAAAAGATCGAGGAGA+AGG - Chr7:71481427-71481446 None:intergenic 30.0%
ACTGGCAGAAAATTAAAACA+CGG - Chr7:71482523-71482542 None:intergenic 30.0%
ATATACTCTGATAACCAGAA+GGG - Chr7:71480384-71480403 None:intergenic 30.0%
ATCAATGATATCACTTTCCT+AGG - Chr7:71478959-71478978 None:intergenic 30.0%
ATGTAGTAGTAAAGGGAAAA+GGG + Chr7:71483143-71483162 MsG0780039984.01.T01:three_prime_UTR 30.0%
ATGTTTCATCATTGTAGGTT+CGG + Chr7:71480007-71480026 MsG0780039984.01.T01:intron 30.0%
ATTACTGCAACAAAAAGAAC+TGG - Chr7:71483203-71483222 None:intergenic 30.0%
ATTGAAAGATAACTTCACAG+TGG + Chr7:71480455-71480474 MsG0780039984.01.T01:intron 30.0%
CAGTAATATACTACAAAACG+GGG - Chr7:71481992-71482011 None:intergenic 30.0%
CATGTTAAGAAACAAGTCAA+AGG - Chr7:71482049-71482068 None:intergenic 30.0%
CCAGTAATATACTACAAAAC+GGG - Chr7:71481993-71482012 None:intergenic 30.0%
CCTTACATAATAAAAAGGGA+AGG - Chr7:71482703-71482722 None:intergenic 30.0%
CTAATATGTATCACAGTATC+AGG - Chr7:71481757-71481776 None:intergenic 30.0%
CTATAAGCTAAAAAGCTACT+TGG + Chr7:71478245-71478264 MsG0780039984.01.T01:intron 30.0%
CTATTACCCACTATCAATTA+TGG - Chr7:71479258-71479277 None:intergenic 30.0%
CTGATACTGTGATACATATT+AGG + Chr7:71481755-71481774 MsG0780039984.01.T01:intron 30.0%
CTGTTATGTTTCATCATTGT+AGG + Chr7:71480002-71480021 MsG0780039984.01.T01:intron 30.0%
GAACGAGAATGATATTCAAA+AGG - Chr7:71481647-71481666 None:intergenic 30.0%
GACCACCTTACATAATAAAA+AGG - Chr7:71482708-71482727 None:intergenic 30.0%
GCAAAAACAAAACAAAAAGG+TGG - Chr7:71481161-71481180 None:intergenic 30.0%
GCCAGTAATATACTACAAAA+CGG - Chr7:71481994-71482013 None:intergenic 30.0%
TATATACTCTGATAACCAGA+AGG - Chr7:71480385-71480404 None:intergenic 30.0%
TCTATAGTATACTCAGTTTG+AGG + Chr7:71479703-71479722 MsG0780039984.01.T01:intron 30.0%
TGAACATTTATTGTGGATGA+TGG + Chr7:71479892-71479911 MsG0780039984.01.T01:intron 30.0%
TGATAGCAGAAAAATAGGTT+TGG - Chr7:71479159-71479178 None:intergenic 30.0%
TGGCATGTTAGACATAATAT+TGG + Chr7:71481096-71481115 MsG0780039984.01.T01:intron 30.0%
TGTATGCACGTATATCTATT+TGG - Chr7:71480427-71480446 None:intergenic 30.0%
TTAACATCATCAACGTGATT+TGG - Chr7:71480103-71480122 None:intergenic 30.0%
TTAGGCATATCAGTTAACTT+GGG + Chr7:71481269-71481288 MsG0780039984.01.T01:intron 30.0%
TTCAACTTGTCATGGATAAA+GGG + Chr7:71482183-71482202 MsG0780039984.01.T01:CDS 30.0%
TTCATTTGTCATCTCTAACA+CGG - Chr7:71479876-71479895 None:intergenic 30.0%
TTGATAGAATGAGATGTGTT+TGG - Chr7:71478317-71478336 None:intergenic 30.0%
TTGTACTAAATAGCATATCG+CGG - Chr7:71479077-71479096 None:intergenic 30.0%
TTTCAACTTGTCATGGATAA+AGG + Chr7:71482182-71482201 MsG0780039984.01.T01:CDS 30.0%
TTTCTTCTCATGTAGCTTAA+AGG + Chr7:71481041-71481060 MsG0780039984.01.T01:intron 30.0%
! AATTTTGCCTATTGCAAAGT+GGG + Chr7:71482563-71482582 MsG0780039984.01.T01:intron 30.0%
! ATGATATTCAAAAGGCATAG+GGG - Chr7:71481639-71481658 None:intergenic 30.0%
! CAGAAACCATAATTGATAGT+GGG + Chr7:71479249-71479268 MsG0780039984.01.T01:intron 30.0%
! CCTTCCCTTTTTATTATGTA+AGG + Chr7:71482700-71482719 MsG0780039984.01.T01:intron 30.0%
! CTTATTCTGAATACTGATTG+TGG + Chr7:71480772-71480791 MsG0780039984.01.T01:intron 30.0%
! GAATGATATTCAAAAGGCAT+AGG - Chr7:71481641-71481660 None:intergenic 30.0%
! GTTTCCCAACATCAAATTTT+TGG + Chr7:71480942-71480961 MsG0780039984.01.T01:CDS 30.0%
! TAATTTTCTGCCAGTTAGTT+TGG + Chr7:71482528-71482547 MsG0780039984.01.T01:intron 30.0%
! TCCCTTTTTATTATGTAAGG+TGG + Chr7:71482703-71482722 MsG0780039984.01.T01:intron 30.0%
! TGTTTTTCTTCTCCTTTGTT+TGG + Chr7:71481394-71481413 MsG0780039984.01.T01:intron 30.0%
! TTGTTGTTGTTAATAGATCG+TGG + Chr7:71477284-71477303 MsG0780039984.01.T01:intron 30.0%
!! AAATCACGTTGATGATGTTA+AGG + Chr7:71480102-71480121 MsG0780039984.01.T01:CDS 30.0%
!! AAGTTTTAGCATACAAACAC+CGG - Chr7:71478423-71478442 None:intergenic 30.0%
!! AATTTTCTGCCAGTTAGTTT+GGG + Chr7:71482529-71482548 MsG0780039984.01.T01:intron 30.0%
!! GGTTAGTTTAATAAGATCGT+GGG + Chr7:71478145-71478164 MsG0780039984.01.T01:intron 30.0%
!! GTTTTTCTTCTCCTTTGTTT+GGG + Chr7:71481395-71481414 MsG0780039984.01.T01:intron 30.0%
!! TCACTTTTCATCCATATTGT+TGG + Chr7:71480233-71480252 MsG0780039984.01.T01:intron 30.0%
!! TGGTTAGTTTAATAAGATCG+TGG + Chr7:71478144-71478163 MsG0780039984.01.T01:intron 30.0%
!! TTTGTTTTCTAGGCATTTCT+AGG + Chr7:71479278-71479297 MsG0780039984.01.T01:intron 30.0%
!!! TGGGTAATAGTTTGTTTTCT+AGG + Chr7:71479268-71479287 MsG0780039984.01.T01:intron 30.0%
AAAGCCAACATGGTAAATCA+TGG + Chr7:71478124-71478143 MsG0780039984.01.T01:intron 35.0%
AAATACATGAGTTTCCCTTC+TGG + Chr7:71480367-71480386 MsG0780039984.01.T01:intron 35.0%
AAGCTTCCCATAAGAAAGAA+AGG - Chr7:71481338-71481357 None:intergenic 35.0%
ACAAGTGTTTCAACTTGTCA+TGG + Chr7:71482175-71482194 MsG0780039984.01.T01:CDS 35.0%
ACAGCCTTAGGGTTTATAAT+TGG + Chr7:71478394-71478413 MsG0780039984.01.T01:intron 35.0%
AGCTATTCACCCAAATGAAA+GGG - Chr7:71483099-71483118 None:intergenic 35.0%
AGTTGGAATGTACTTGACAT+TGG + Chr7:71480160-71480179 MsG0780039984.01.T01:CDS 35.0%
AGTTTAGGTCTTTGGTGAAT+GGG + Chr7:71482969-71482988 MsG0780039984.01.T01:three_prime_UTR 35.0%
ATAAAAAGGGAAGGTCAGAA+AGG - Chr7:71482694-71482713 None:intergenic 35.0%
ATAGCAATCTGATAGAAGTC+TGG + Chr7:71478015-71478034 MsG0780039984.01.T01:intron 35.0%
ATAGTATACTCAGTTTGAGG+AGG + Chr7:71479706-71479725 MsG0780039984.01.T01:intron 35.0%
ATGCATTCACATCACATTTG+AGG - Chr7:71481811-71481830 None:intergenic 35.0%
ATGGAGAACAAATTACCAAG+TGG - Chr7:71482341-71482360 None:intergenic 35.0%
ATTTGGACATTACCACCAAA+AGG - Chr7:71481217-71481236 None:intergenic 35.0%
CAAAGCTTCAGAATGTACTT+TGG + Chr7:71479604-71479623 MsG0780039984.01.T01:intron 35.0%
CAAGATCTAAAGACTGAACA+AGG - Chr7:71480752-71480771 None:intergenic 35.0%
CACATCATGTAACAGTACAA+AGG + Chr7:71482727-71482746 MsG0780039984.01.T01:CDS 35.0%
CACCTTATTGAACAAACTCT+TGG + Chr7:71480833-71480852 MsG0780039984.01.T01:intron 35.0%
CAGCCTTAGGGTTTATAATT+GGG + Chr7:71478395-71478414 MsG0780039984.01.T01:intron 35.0%
CCACTATCAATTATGGTTTC+TGG - Chr7:71479251-71479270 None:intergenic 35.0%
CCAGAAACCATAATTGATAG+TGG + Chr7:71479248-71479267 MsG0780039984.01.T01:intron 35.0%
CCTAAACTCATGAAGGAAAA+AGG - Chr7:71482957-71482976 None:intergenic 35.0%
CGCGAATTTCTTCAATTCAT+CGG - Chr7:71477229-71477248 None:intergenic 35.0%
CTAACCATGATTTACCATGT+TGG - Chr7:71478131-71478150 None:intergenic 35.0%
CTTAGGCATATCAGTTAACT+TGG + Chr7:71481268-71481287 MsG0780039984.01.T01:intron 35.0%
CTTGTTAAGACACCTTATTG+TGG - Chr7:71481244-71481263 None:intergenic 35.0%
GCCGCAAAAACAAAACAAAA+AGG - Chr7:71481164-71481183 None:intergenic 35.0%
GGTGTTTGTATGCTAAAACT+TGG + Chr7:71478422-71478441 MsG0780039984.01.T01:intron 35.0%
GTGTCTTAACAAGTCTTCTT+AGG + Chr7:71481251-71481270 MsG0780039984.01.T01:intron 35.0%
GTTCCCAATTATAAACCCTA+AGG - Chr7:71478401-71478420 None:intergenic 35.0%
GTTGGAATGTACTTGACATT+GGG + Chr7:71480161-71480180 MsG0780039984.01.T01:CDS 35.0%
TAGGGTTTATAATTGGGAAC+CGG + Chr7:71478401-71478420 MsG0780039984.01.T01:intron 35.0%
TCAAACTAAGTCTCTGATCT+AGG - Chr7:71479643-71479662 None:intergenic 35.0%
TCAGGCAATTGGCATATATT+TGG + Chr7:71481298-71481317 MsG0780039984.01.T01:intron 35.0%
TCATGGCCTTTCTTTCTTAT+GGG + Chr7:71481329-71481348 MsG0780039984.01.T01:intron 35.0%
TCATTTGTCATCTCTAACAC+GGG - Chr7:71479875-71479894 None:intergenic 35.0%
TCCAAGAATTGGCTAAACAA+GGG + Chr7:71480203-71480222 MsG0780039984.01.T01:CDS 35.0%
TGATGTCCTTGAAACAAAGT+TGG + Chr7:71482151-71482170 MsG0780039984.01.T01:CDS 35.0%
TGCATATCAATGAAGCTATG+AGG + Chr7:71480562-71480581 MsG0780039984.01.T01:intron 35.0%
TGGAGAACAAATTACCAAGT+GGG - Chr7:71482340-71482359 None:intergenic 35.0%
TGTATTGGGATTCTGTTTCA+AGG + Chr7:71482400-71482419 MsG0780039984.01.T01:CDS 35.0%
TTATGTAGTTGTAAGAGACG+TGG - Chr7:71480347-71480366 None:intergenic 35.0%
! AACAATGGACAACATTGACT+AGG + Chr7:71479178-71479197 MsG0780039984.01.T01:intron 35.0%
! AGTTAACTTGGGATAAGATC+AGG + Chr7:71481280-71481299 MsG0780039984.01.T01:intron 35.0%
! CCCGTTTTGTAGTATATTAC+TGG + Chr7:71481990-71482009 MsG0780039984.01.T01:intron 35.0%
! CCTTTTTCCTTCATGAGTTT+AGG + Chr7:71482954-71482973 MsG0780039984.01.T01:three_prime_UTR 35.0%
! CTTGTTCCAACTTTGTTTCA+AGG - Chr7:71482160-71482179 None:intergenic 35.0%
! GAATTTTGCCTATTGCAAAG+TGG + Chr7:71482562-71482581 MsG0780039984.01.T01:intron 35.0%
! TAAGCTAGCTTATAGCTTGT+TGG - Chr7:71478359-71478378 None:intergenic 35.0%
! TCTAGATCACTTATGCCTTT+TGG + Chr7:71481199-71481218 MsG0780039984.01.T01:intron 35.0%
! TGCCAAGAGTTTGTTCAATA+AGG - Chr7:71480838-71480857 None:intergenic 35.0%
! TGGATTCGTGATTTTGCTTA+GGG + Chr7:71477304-71477323 MsG0780039984.01.T01:intron 35.0%
! TGGCTCTGTCATAATTCTAT+TGG + Chr7:71482275-71482294 MsG0780039984.01.T01:intron 35.0%
! TGTTGCGTTTTCGCAATTTA+TGG + Chr7:71477405-71477424 MsG0780039984.01.T01:intron 35.0%
! TTGTGCATTGACATTTCTCA+AGG + Chr7:71480070-71480089 MsG0780039984.01.T01:CDS 35.0%
!! CTGGTACTGATTATAGTGAA+CGG + Chr7:71480881-71480900 MsG0780039984.01.T01:CDS 35.0%
!! TAGTTTTACACGTAACGTAC+CGG - Chr7:71476823-71476842 None:intergenic 35.0%
!! TGATGTTGATTGGTAATGTG+TGG + Chr7:71477448-71477467 MsG0780039984.01.T01:intron 35.0%
!! TGGTACTGATTATAGTGAAC+GGG + Chr7:71480882-71480901 MsG0780039984.01.T01:CDS 35.0%
!!! GGTGCAGTTTTGTTAATTAG+TGG + Chr7:71479012-71479031 MsG0780039984.01.T01:intron 35.0%
!!! GTGTTTTGTTTGTTAAAGCG+AGG + Chr7:71481130-71481149 MsG0780039984.01.T01:intron 35.0%
!!! TTTACGTTTTAGGGTGTGTT+TGG + Chr7:71477508-71477527 MsG0780039984.01.T01:intron 35.0%
AAAGGGACACTTGATGCTAT+TGG + Chr7:71482200-71482219 MsG0780039984.01.T01:CDS 40.0%
AACAATTTCCCACAATGCTG+AGG - Chr7:71479925-71479944 None:intergenic 40.0%
AACTATGTCACCTGCTTCAT+GGG + Chr7:71481704-71481723 MsG0780039984.01.T01:intron 40.0%
AAGAGACGTGGAGATAATGT+TGG - Chr7:71480335-71480354 None:intergenic 40.0%
AAGTTTCCTCCCCTTTCATT+TGG + Chr7:71483086-71483105 MsG0780039984.01.T01:three_prime_UTR 40.0%
AATGTACTTGACATTGGGAC+TGG + Chr7:71480166-71480185 MsG0780039984.01.T01:CDS 40.0%
ACGTATCCGACATTCATGTT+TGG + Chr7:71482875-71482894 MsG0780039984.01.T01:CDS 40.0%
ACTAAACAAGCTCAGATACG+GGG - Chr7:71481077-71481096 None:intergenic 40.0%
ACTACAAAACGGGGAACAAA+AGG - Chr7:71481983-71482002 None:intergenic 40.0%
ACTACTTTGAACGCAGGAAA+GGG - Chr7:71476874-71476893 None:intergenic 40.0%
ACTAGTACTACTTTGAACGC+AGG - Chr7:71476880-71476899 None:intergenic 40.0%
ACTCATGAAGGAAAAAGGAC+AGG - Chr7:71482952-71482971 None:intergenic 40.0%
AGACGCATGTGTATTACTTC+TGG + Chr7:71483015-71483034 MsG0780039984.01.T01:three_prime_UTR 40.0%
AGGGAGTTAGCATTAGCATA+TGG + Chr7:71480536-71480555 MsG0780039984.01.T01:intron 40.0%
AGTACGGAATACAACAAGCT+AGG - Chr7:71479454-71479473 None:intergenic 40.0%
AGTAGTTGCATCTTGGACAA+AGG + Chr7:71480045-71480064 MsG0780039984.01.T01:CDS 40.0%
AGTTTCCTCCCCTTTCATTT+GGG + Chr7:71483087-71483106 MsG0780039984.01.T01:three_prime_UTR 40.0%
ATAAACCCTAAGGCTGTGTT+TGG - Chr7:71478391-71478410 None:intergenic 40.0%
ATGGAACCTGTAATCTGATG+CGG - Chr7:71477188-71477207 None:intergenic 40.0%
ATGTCATGAACACAGCAACA+TGG - Chr7:71482640-71482659 None:intergenic 40.0%
CAAACCAGCAGAAGATTACA+TGG - Chr7:71482360-71482379 None:intergenic 40.0%
CACCTTATTGTGGCACAATT+TGG - Chr7:71481234-71481253 None:intergenic 40.0%
CACTAAACAAGCTCAGATAC+GGG - Chr7:71481078-71481097 None:intergenic 40.0%
CAGCTATTCACCCAAATGAA+AGG - Chr7:71483100-71483119 None:intergenic 40.0%
CCAAAGACCTAAACTCATGA+AGG - Chr7:71482964-71482983 None:intergenic 40.0%
CCACTAAACAAGCTCAGATA+CGG - Chr7:71481079-71481098 None:intergenic 40.0%
CCTTCATGAGTTTAGGTCTT+TGG + Chr7:71482961-71482980 MsG0780039984.01.T01:three_prime_UTR 40.0%
CTCAGGTTCTCTGATTTAAC+TGG + Chr7:71480862-71480881 MsG0780039984.01.T01:intron 40.0%
CTCCAAGAATTGGCTAAACA+AGG + Chr7:71480202-71480221 MsG0780039984.01.T01:CDS 40.0%
GAATTGGCTAAACAAGGGTA+TGG + Chr7:71480208-71480227 MsG0780039984.01.T01:intron 40.0%
GAGGTAAATTCAAAGTGGTG+TGG + Chr7:71479836-71479855 MsG0780039984.01.T01:intron 40.0%
GAGTTTAGGTCTTTGGTGAA+TGG + Chr7:71482968-71482987 MsG0780039984.01.T01:three_prime_UTR 40.0%
GATCCACCAAACATGAATGT+CGG - Chr7:71482884-71482903 None:intergenic 40.0%
GCTATTCACCCAAATGAAAG+GGG - Chr7:71483098-71483117 None:intergenic 40.0%
GGTTGAAACTTTCCACTTCT+TGG - Chr7:71482763-71482782 None:intergenic 40.0%
GTAATCTGCAATTCAGACCT+AGG + Chr7:71478939-71478958 MsG0780039984.01.T01:intron 40.0%
GTACTTACAAGTATTCCACC+AGG - Chr7:71482435-71482454 None:intergenic 40.0%
GTCAATGTGATCACATGTGT+TGG - Chr7:71478495-71478514 None:intergenic 40.0%
GTCATGGCCTTTCTTTCTTA+TGG + Chr7:71481328-71481347 MsG0780039984.01.T01:intron 40.0%
GTCCAAATTGTGCCACAATA+AGG + Chr7:71481229-71481248 MsG0780039984.01.T01:intron 40.0%
TAACTATGTCACCTGCTTCA+TGG + Chr7:71481703-71481722 MsG0780039984.01.T01:intron 40.0%
TACTACTTTGAACGCAGGAA+AGG - Chr7:71476875-71476894 None:intergenic 40.0%
TAGGTTCGGAGATAATGTGA+TGG + Chr7:71480021-71480040 MsG0780039984.01.T01:intron 40.0%
TATCCGACATTCATGTTTGG+TGG + Chr7:71482878-71482897 MsG0780039984.01.T01:CDS 40.0%
TCAGCATTGTGGGAAATTGT+TGG + Chr7:71479924-71479943 MsG0780039984.01.T01:intron 40.0%
TCATGTAGCTTAAAGGCAGA+AGG + Chr7:71481048-71481067 MsG0780039984.01.T01:intron 40.0%
TCTGCATGATTCATCATCCT+TGG - Chr7:71482822-71482841 None:intergenic 40.0%
TCTTTCTCTTACCTCTTGAC+AGG - Chr7:71482242-71482261 None:intergenic 40.0%
TGATGGAAGTAGTTGCATCT+TGG + Chr7:71480038-71480057 MsG0780039984.01.T01:CDS 40.0%
TGTCATGAACACAGCAACAT+GGG - Chr7:71482639-71482658 None:intergenic 40.0%
TGTTACCAAACACAGCCTTA+GGG + Chr7:71478383-71478402 MsG0780039984.01.T01:intron 40.0%
TTCGCAATTTATGGCGGTTA+AGG + Chr7:71477414-71477433 MsG0780039984.01.T01:intron 40.0%
TTCTCCATGTAATCTTCTGC+TGG + Chr7:71482353-71482372 MsG0780039984.01.T01:intron 40.0%
TTGGGATAAGATCAGGCAAT+TGG + Chr7:71481287-71481306 MsG0780039984.01.T01:intron 40.0%
TTTCATGAACATGGTCATGC+TGG + Chr7:71478744-71478763 MsG0780039984.01.T01:CDS 40.0%
! ACCCTTGTTTAGCCAATTCT+TGG - Chr7:71480207-71480226 None:intergenic 40.0%
! AGATCACTTATGCCTTTTGG+TGG + Chr7:71481202-71481221 MsG0780039984.01.T01:intron 40.0%
! GTGGATTCGTGATTTTGCTT+AGG + Chr7:71477303-71477322 MsG0780039984.01.T01:intron 40.0%
! TATTCAAAAGGCATAGGGGT+TGG - Chr7:71481635-71481654 None:intergenic 40.0%
! TGCGTTTTCGCAATTTATGG+CGG + Chr7:71477408-71477427 MsG0780039984.01.T01:intron 40.0%
! TGCTATAGTGCCACTAAAGT+CGG - Chr7:71479115-71479134 None:intergenic 40.0%
! TTCACATCACATTTGAGGCA+AGG - Chr7:71481806-71481825 None:intergenic 40.0%
! TTCTTCTCCTTTGTTTGGGA+GGG + Chr7:71481399-71481418 MsG0780039984.01.T01:intron 40.0%
! TTTCTTCTCCTTTGTTTGGG+AGG + Chr7:71481398-71481417 MsG0780039984.01.T01:intron 40.0%
! TTTTCGAAGAAATGCCACAG+TGG - Chr7:71482924-71482943 None:intergenic 40.0%
!! AAAAGGGGGAGTATCTTTGT+TGG - Chr7:71479484-71479503 None:intergenic 40.0%
!! AAAGGGGGAGTATCTTTGTT+GGG - Chr7:71479483-71479502 None:intergenic 40.0%
!! TGGTTTGCTTCTCCAAGAAT+TGG + Chr7:71480192-71480211 MsG0780039984.01.T01:CDS 40.0%
!! TGTTAAAGTGCCGACTTTAG+TGG + Chr7:71479102-71479121 MsG0780039984.01.T01:intron 40.0%
!!! GGGAAGTAGCACTTTTTCTT+TGG - Chr7:71482784-71482803 None:intergenic 40.0%
AAAGCCTTGCTAACCGTGAT+GGG + Chr7:71480920-71480939 MsG0780039984.01.T01:CDS 45.0%
AAAGGGCAGTTAGTTCAGTG+AGG + Chr7:71483160-71483179 MsG0780039984.01.T01:three_prime_UTR 45.0%
ACAAGGGCAGTTTCATTCCT+AGG - Chr7:71480735-71480754 None:intergenic 45.0%
ACTATAGCACTGTTGCGTAG+CGG + Chr7:71479126-71479145 MsG0780039984.01.T01:intron 45.0%
ACTTTCAGAGTCTCTGTGTG+TGG + Chr7:71480973-71480992 MsG0780039984.01.T01:intron 45.0%
AGCATATCGCGGAACAATAG+AGG - Chr7:71479066-71479085 None:intergenic 45.0%
AGCGTCAATCCCTGTAATTG+AGG + Chr7:71479817-71479836 MsG0780039984.01.T01:intron 45.0%
AGGGTGGTTTCGTTACTATG+CGG - Chr7:71476960-71476979 None:intergenic 45.0%
ATCACGGTTAGCAAGGCTTT+GGG - Chr7:71480920-71480939 None:intergenic 45.0%
ATGGACTCCCACTTTGCAAT+AGG - Chr7:71482573-71482592 None:intergenic 45.0%
ATGGTCATGCTGGTGAAGTT+TGG + Chr7:71478754-71478773 MsG0780039984.01.T01:CDS 45.0%
ATTCACCCAAATGAAAGGGG+AGG - Chr7:71483095-71483114 None:intergenic 45.0%
CAAGGATGAATCTGATGCTG+AGG + Chr7:71478656-71478675 MsG0780039984.01.T01:CDS 45.0%
CTTCAATTCATCGGAGAGAG+AGG - Chr7:71477220-71477239 None:intergenic 45.0%
CTTGACATTGGGACTGGAAA+TGG + Chr7:71480172-71480191 MsG0780039984.01.T01:CDS 45.0%
CTTTGTTGGGGAAGTGAGTA+CGG - Chr7:71479470-71479489 None:intergenic 45.0%
GAGGCAGTTTCATCAATGCT+GGG + Chr7:71478675-71478694 MsG0780039984.01.T01:CDS 45.0%
GATGATGTTAAGGCTGATGC+TGG + Chr7:71480112-71480131 MsG0780039984.01.T01:CDS 45.0%
GCAATTTATGGCGGTTAAGG+TGG + Chr7:71477417-71477436 MsG0780039984.01.T01:intron 45.0%
GCTATTGGATTGCATCCTGA+TGG + Chr7:71482215-71482234 MsG0780039984.01.T01:CDS 45.0%
GCTGGGATTTCAGAGTTACT+GGG + Chr7:71478692-71478711 MsG0780039984.01.T01:CDS 45.0%
GGATGAGTTAGTCCAAGAAG+TGG + Chr7:71482748-71482767 MsG0780039984.01.T01:CDS 45.0%
GTGATGAACCTCAGCATTGT+GGG + Chr7:71479914-71479933 MsG0780039984.01.T01:intron 45.0%
GTGTTACCAAACACAGCCTT+AGG + Chr7:71478382-71478401 MsG0780039984.01.T01:intron 45.0%
TCTCTGATCTAGGCAAAGCA+AGG - Chr7:71479633-71479652 None:intergenic 45.0%
TGAACACAGCAACATGGGAA+AGG - Chr7:71482634-71482653 None:intergenic 45.0%
TGAGGCAGTTTCATCAATGC+TGG + Chr7:71478674-71478693 MsG0780039984.01.T01:CDS 45.0%
TGATGTTGGGAAACCCATCA+CGG - Chr7:71480936-71480955 None:intergenic 45.0%
TGCTGGGATTTCAGAGTTAC+TGG + Chr7:71478691-71478710 MsG0780039984.01.T01:CDS 45.0%
TGGTCCATCAAAAGCGAGTA+CGG + Chr7:71477094-71477113 MsG0780039984.01.T01:CDS 45.0%
TTAGTGGCGCTATTGCATAG+TGG + Chr7:71479028-71479047 MsG0780039984.01.T01:intron 45.0%
TTGAGGAGGATGTGAACTTC+AGG + Chr7:71479720-71479739 MsG0780039984.01.T01:intron 45.0%
TTGGGATTCTGTTTCAAGGC+TGG + Chr7:71482404-71482423 MsG0780039984.01.T01:CDS 45.0%
! CCGTATCTGAGCTTGTTTAG+TGG + Chr7:71481076-71481095 MsG0780039984.01.T01:intron 45.0%
! GCAAGGTTCATTTTGAGCCT+GGG - Chr7:71481789-71481808 None:intergenic 45.0%
! TTCATGTTTGGTGGATCCGT+AGG + Chr7:71482887-71482906 MsG0780039984.01.T01:CDS 45.0%
! TTTGATGGACCATGAGTCAG+CGG - Chr7:71477086-71477105 None:intergenic 45.0%
!! AAGGGGGAGTATCTTTGTTG+GGG - Chr7:71479482-71479501 None:intergenic 45.0%
!! AATAAAATAAAATTAAGAAA+AGG + Chr7:71478189-71478208 MsG0780039984.01.T01:intron 5.0%
!! ATAATATTATATATTTATGA+AGG - Chr7:71480706-71480725 None:intergenic 5.0%
!!! GAATTTTTTTAATTATATAA+GGG + Chr7:71480517-71480536 MsG0780039984.01.T01:intron 5.0%
!!! TGAATTTTTTTAATTATATA+AGG + Chr7:71480516-71480535 MsG0780039984.01.T01:intron 5.0%
AAATGCCACAGTGGCAACAC+GGG - Chr7:71482915-71482934 None:intergenic 50.0%
ACCTGTAATCTGATGCGGCA+CGG - Chr7:71477183-71477202 None:intergenic 50.0%
ACTTTGAACGCAGGAAAGGG+TGG - Chr7:71476871-71476890 None:intergenic 50.0%
ATCCTGATGGTCCTGTCAAG+AGG + Chr7:71482228-71482247 MsG0780039984.01.T01:CDS 50.0%
ATCCTTGGCTACCTCAGGTT+CGG - Chr7:71482807-71482826 None:intergenic 50.0%
CAAACTCTTGGCATCTGCTC+AGG + Chr7:71480845-71480864 MsG0780039984.01.T01:intron 50.0%
CAAAGCCTTGCTAACCGTGA+TGG + Chr7:71480919-71480938 MsG0780039984.01.T01:CDS 50.0%
CAATCCGAGCCTATGAAGCA+CGG - Chr7:71478579-71478598 None:intergenic 50.0%
CATCACGGTTAGCAAGGCTT+TGG - Chr7:71480921-71480940 None:intergenic 50.0%
GAAACCCATCACGGTTAGCA+AGG - Chr7:71480927-71480946 None:intergenic 50.0%
GAAATGCCACAGTGGCAACA+CGG - Chr7:71482916-71482935 None:intergenic 50.0%
GAAGGAACCCTCCCAAACAA+AGG - Chr7:71481409-71481428 None:intergenic 50.0%
GACGTTAGAGAGAGCTTCAG+CGG - Chr7:71477155-71477174 None:intergenic 50.0%
GAGAGAGAGGTGATGAGGAA+TGG - Chr7:71477207-71477226 None:intergenic 50.0%
GCTAGCTGATAGCTGATAGC+TGG + Chr7:71477547-71477566 MsG0780039984.01.T01:intron 50.0%
GGTGATGAACCTCAGCATTG+TGG + Chr7:71479913-71479932 MsG0780039984.01.T01:intron 50.0%
GTCAGTGTTCGTGTCATGTC+CGG + Chr7:71478550-71478569 MsG0780039984.01.T01:intron 50.0%
GTGGTTTCGTTACTATGCGG+TGG - Chr7:71476957-71476976 None:intergenic 50.0%
TACCTCTTGACAGGACCATC+AGG - Chr7:71482233-71482252 None:intergenic 50.0%
TCATCATCCTTGGCTACCTC+AGG - Chr7:71482812-71482831 None:intergenic 50.0%
TGCAAACGAATTCCGGCCAT+CGG - Chr7:71476983-71477002 None:intergenic 50.0%
TGTCACGAGCCCAAACTAAC+TGG - Chr7:71482541-71482560 None:intergenic 50.0%
TTCCGGCTGCAAACGAATTC+CGG - Chr7:71476990-71477009 None:intergenic 50.0%
! GGCAAGGTTCATTTTGAGCC+TGG - Chr7:71481790-71481809 None:intergenic 50.0%
! GTATCAGGTTGCATCATGCC+TGG - Chr7:71481742-71481761 None:intergenic 50.0%
! GTGTGTGTGCAGTTCTGACA+AGG + Chr7:71478638-71478657 MsG0780039984.01.T01:intron 50.0%
! GTTCATTTTGAGCCTGGGAG+AGG - Chr7:71481784-71481803 None:intergenic 50.0%
!! AAGGCTTTGGGCAAGGTTGA+TGG - Chr7:71480908-71480927 None:intergenic 50.0%
AAACGAATTCCGGCCATCGG+AGG - Chr7:71476980-71476999 None:intergenic 55.0%
AACGAATTCCGGCCATCGGA+GGG - Chr7:71476979-71476998 None:intergenic 55.0%
AGCCTATGAAGCACGGACAC+CGG - Chr7:71478572-71478591 None:intergenic 55.0%
ATGAGTCAGCGGCGATGGAA+CGG - Chr7:71477075-71477094 None:intergenic 55.0%
CATATTAGGCTGCCTCTCCC+AGG + Chr7:71481769-71481788 MsG0780039984.01.T01:intron 55.0%
CATCGGAGAGAGAGGTGATG+AGG - Chr7:71477212-71477231 None:intergenic 55.0%
CGATGACGATCAACGCCATG+CGG + Chr7:71477126-71477145 MsG0780039984.01.T01:CDS 55.0%
GTAACGAAACCACCCTCCGA+TGG + Chr7:71476964-71476983 MsG0780039984.01.T01:exon 55.0%
GTGTCCGTGCTTCATAGGCT+CGG + Chr7:71478572-71478591 MsG0780039984.01.T01:intron 55.0%
TCCGTGCCGCATCAGATTAC+AGG + Chr7:71477179-71477198 MsG0780039984.01.T01:CDS 55.0%
TCCTTGGCTACCTCAGGTTC+GGG - Chr7:71482806-71482825 None:intergenic 55.0%
TGTAATCTGATGCGGCACGG+AGG - Chr7:71477180-71477199 None:intergenic 55.0%
! GTTTCAAGGCTGGTTGCTCC+TGG + Chr7:71482414-71482433 MsG0780039984.01.T01:CDS 55.0%
!! GCTGCCGTACTCGCTTTTGA+TGG - Chr7:71477101-71477120 None:intergenic 55.0%
!! GGTTAGCAAGGCTTTGGGCA+AGG - Chr7:71480915-71480934 None:intergenic 55.0%
!! GTGCTGCTTTCCCATGAAGC+AGG - Chr7:71481717-71481736 None:intergenic 55.0%
AGTGGCAACACGGGAGCCTA+CGG - Chr7:71482906-71482925 None:intergenic 60.0%
CATGGGAAAGCAGCACTGCC+AGG + Chr7:71481721-71481740 MsG0780039984.01.T01:intron 60.0%
CCTTGGCTACCTCAGGTTCG+GGG - Chr7:71482805-71482824 None:intergenic 60.0%
CTTGGCTACCTCAGGTTCGG+GGG - Chr7:71482804-71482823 None:intergenic 60.0%
GGCCGGAATTCGTTTGCAGC+CGG + Chr7:71476985-71477004 MsG0780039984.01.T01:CDS 60.0%
GTCCGGTGTCCGTGCTTCAT+AGG + Chr7:71478567-71478586 MsG0780039984.01.T01:intron 60.0%
TGCGAGACGTCGGAGTCTTC+CGG - Chr7:71477007-71477026 None:intergenic 60.0%
! TCAAGGCTGGTTGCTCCTGG+TGG + Chr7:71482417-71482436 MsG0780039984.01.T01:CDS 60.0%
! TCGCGCTTGTTGCGAGACGT+CGG - Chr7:71477017-71477036 None:intergenic 60.0%
! TGCTACTTCCCCCGAACCTG+AGG + Chr7:71482793-71482812 MsG0780039984.01.T01:CDS 60.0%
!! GTTCCATCGCCGCTGACTCA+TGG + Chr7:71477074-71477093 MsG0780039984.01.T01:CDS 60.0%
AGGCTCCCGTGTTGCCACTG+TGG + Chr7:71482907-71482926 MsG0780039984.01.T01:CDS 65.0%
CCCCGAACCTGAGGTAGCCA+AGG + Chr7:71482802-71482821 MsG0780039984.01.T01:CDS 65.0%
CGAAACCACCCTCCGATGGC+CGG + Chr7:71476968-71476987 MsG0780039984.01.T01:exon 65.0%
GAATTCCGGCCATCGGAGGG+TGG - Chr7:71476976-71476995 None:intergenic 65.0%
GGACCATGAGTCAGCGGCGA+TGG - Chr7:71477080-71477099 None:intergenic 65.0%
GGCGATGGAACGGTCGTCGT+CGG - Chr7:71477065-71477084 None:intergenic 65.0%
GAGCTTCAGCGGCGTCCGCA+TGG - Chr7:71477144-71477163 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 71476805 71483252 71476805 ID=MsG0780039984.01;Name=MsG0780039984.01
Chr7 mRNA 71476805 71483252 71476805 ID=MsG0780039984.01.T01;Parent=MsG0780039984.01;Name=MsG0780039984.01.T01;_AED=0.39;_eAED=0.39;_QI=178|1|1|1|1|1|7|306|340
Chr7 exon 71476805 71477200 71476805 ID=MsG0780039984.01.T01:exon:13857;Parent=MsG0780039984.01.T01
Chr7 exon 71478650 71478775 71478650 ID=MsG0780039984.01.T01:exon:13858;Parent=MsG0780039984.01.T01
Chr7 exon 71480024 71480224 71480024 ID=MsG0780039984.01.T01:exon:13859;Parent=MsG0780039984.01.T01
Chr7 exon 71480867 71480963 71480867 ID=MsG0780039984.01.T01:exon:13860;Parent=MsG0780039984.01.T01
Chr7 exon 71482146 71482249 71482146 ID=MsG0780039984.01.T01:exon:13861;Parent=MsG0780039984.01.T01
Chr7 exon 71482395 71482446 71482395 ID=MsG0780039984.01.T01:exon:13862;Parent=MsG0780039984.01.T01
Chr7 exon 71482722 71483252 71482722 ID=MsG0780039984.01.T01:exon:13863;Parent=MsG0780039984.01.T01
Chr7 five_prime_UTR 71476805 71476982 71476805 ID=MsG0780039984.01.T01:five_prime_utr;Parent=MsG0780039984.01.T01
Chr7 CDS 71476983 71477200 71476983 ID=MsG0780039984.01.T01:cds;Parent=MsG0780039984.01.T01
Chr7 CDS 71478650 71478775 71478650 ID=MsG0780039984.01.T01:cds;Parent=MsG0780039984.01.T01
Chr7 CDS 71480024 71480224 71480024 ID=MsG0780039984.01.T01:cds;Parent=MsG0780039984.01.T01
Chr7 CDS 71480867 71480963 71480867 ID=MsG0780039984.01.T01:cds;Parent=MsG0780039984.01.T01
Chr7 CDS 71482146 71482249 71482146 ID=MsG0780039984.01.T01:cds;Parent=MsG0780039984.01.T01
Chr7 CDS 71482395 71482446 71482395 ID=MsG0780039984.01.T01:cds;Parent=MsG0780039984.01.T01
Chr7 CDS 71482722 71482946 71482722 ID=MsG0780039984.01.T01:cds;Parent=MsG0780039984.01.T01
Chr7 three_prime_UTR 71482947 71483252 71482947 ID=MsG0780039984.01.T01:three_prime_utr;Parent=MsG0780039984.01.T01
Gene Sequence

>MsG0780039984.01.T01

ATGGCCGGAATTCGTTTGCAGCCGGAAGACTCCGACGTCTCGCAACAAGCGCGAGCTGTTGCTCTCATCGATCTCGTCTCCGACGACGACCGTTCCATCGCCGCTGACTCATGGTCCATCAAAAGCGAGTACGGCAGCACTCTCGATGACGATCAACGCCATGCGGACGCCGCTGAAGCTCTCTCTAACGTCAACCTCCGTGCCGCATCAGATTACAGTTCTGACAAGGATGAATCTGATGCTGAGGCAGTTTCATCAATGCTGGGATTTCAGAGTTACTGGGATGCTGCATATACAGACGAGCTTACAAATTTTCATGAACATGGTCATGCTGGTGAAGTTTGGTTCGGAGATAATGTGATGGAAGTAGTTGCATCTTGGACAAAGGCATTGTGCATTGACATTTCTCAAGGTCGCGTACCAAATCACGTTGATGATGTTAAGGCTGATGCTGGTGAGCTAGATGATAAACTTTTGTCTAGTTGGAATGTACTTGACATTGGGACTGGAAATGGTTTGCTTCTCCAAGAATTGGCTAAACAAGGGTTCTCTGATTTAACTGGTACTGATTATAGTGAACGGGCCATCAACCTTGCCCAAAGCCTTGCTAACCGTGATGGGTTTCCCAACATCAAATTTTTGGTTGATGATGTCCTTGAAACAAAGTTGGAACAAGTGTTTCAACTTGTCATGGATAAAGGGACACTTGATGCTATTGGATTGCATCCTGATGGTCCTGTCAAGAGAATGATGTATTGGGATTCTGTTTCAAGGCTGGTTGCTCCTGGTGGAATACTTGTGGTCACATCATGTAACAGTACAAAGGATGAGTTAGTCCAAGAAGTGGAAAGTTTCAACCAAAGAAAAAGTGCTACTTCCCCCGAACCTGAGGTAGCCAAGGATGATGAATCATGCAGAGATCCCCTATTTCAATATGTTAGTCATGTACGCACGTATCCGACATTCATGTTTGGTGGATCCGTAGGCTCCCGTGTTGCCACTGTGGCATTTCTTCGAAAATGA

Protein sequence

>MsG0780039984.01.T01

MAGIRLQPEDSDVSQQARAVALIDLVSDDDRSIAADSWSIKSEYGSTLDDDQRHADAAEALSNVNLRAASDYSSDKDESDAEAVSSMLGFQSYWDAAYTDELTNFHEHGHAGEVWFGDNVMEVVASWTKALCIDISQGRVPNHVDDVKADAGELDDKLLSSWNVLDIGTGNGLLLQELAKQGFSDLTGTDYSERAINLAQSLANRDGFPNIKFLVDDVLETKLEQVFQLVMDKGTLDAIGLHPDGPVKRMMYWDSVSRLVAPGGILVVTSCNSTKDELVQEVESFNQRKSATSPEPEVAKDDESCRDPLFQYVSHVRTYPTFMFGGSVGSRVATVAFLRK*