AlfalfaGEDB | MsG0480023649.01

M. sativa cultivar ZhongmuNo.1 / MsG0480023649.01

KEGG: -
GO: -
PFAM: PF14309

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023649.01.T01	XP_024627863.1	91.406	128	11	0	1	128	445	572	1.25E-75	244

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047910.01	MsG0480023649.01	0.808443	3.089265e-50	1.766695e-47
MsG0080047955.01	MsG0480023649.01	0.818584	1.816752e-52	1.365332e-49
MsG0080047956.01	MsG0480023649.01	0.826963	2.032514e-54	1.935264e-51
MsG0080048528.01	MsG0480023649.01	0.809510	1.825870e-50	1.074069e-47
MsG0080048773.01	MsG0480023649.01	0.802062	6.704383e-49	3.252821e-46
MsG0080048780.01	MsG0480023649.01	0.826124	3.222535e-54	2.995197e-51
MsG0080048929.01	MsG0480023649.01	0.831128	1.989044e-55	2.138752e-52
MsG0080049004.01	MsG0480023649.01	0.819741	9.906591e-53	7.688264e-50
MsG0080049039.01	MsG0480023649.01	0.803354	3.629060e-49	1.819658e-46
MsG0080049053.01	MsG0480023649.01	0.813228	2.846154e-51	1.847955e-48
MsG0080049062.01	MsG0480023649.01	0.801136	1.038067e-48	4.920046e-46
MsG0080049063.01	MsG0480023649.01	0.836439	9.349837e-57	1.178356e-53
MsG0180000325.01	MsG0480023649.01	0.803170	3.961941e-49	1.977328e-46
MsG0180000549.01	MsG0480023649.01	0.810398	1.176009e-50	7.080911e-48
MsG0180000639.01	MsG0480023649.01	0.810358	1.199382e-50	7.214404e-48
MsG0180000708.01	MsG0480023649.01	0.825872	3.699130e-54	3.413825e-51
MsG0180000793.01	MsG0480023649.01	0.813085	3.059716e-51	1.978904e-48
MsG0180001175.01	MsG0480023649.01	0.829958	3.845433e-55	3.995774e-52
MsG0180001664.01	MsG0480023649.01	0.853537	2.238501e-61	4.852846e-58
MsG0180002700.01	MsG0480023649.01	0.801502	8.737377e-49	4.179450e-46
MsG0180003296.01	MsG0480023649.01	0.801392	9.199508e-49	4.388214e-46
MsG0180003383.01	MsG0480023649.01	0.805508	1.290754e-49	6.840752e-47
MsG0180003442.01	MsG0480023649.01	0.820952	5.226278e-53	4.195129e-50
MsG0180003453.01	MsG0480023649.01	0.800556	1.363806e-48	6.369217e-46
MsG0180003933.01	MsG0480023649.01	0.815352	9.660095e-52	6.644494e-49
MsG0180003980.01	MsG0480023649.01	0.806558	7.761296e-50	4.225594e-47
MsG0180003986.01	MsG0480023649.01	0.803252	3.809110e-49	1.905041e-46
MsG0180004542.01	MsG0480023649.01	0.809975	1.450569e-50	8.638514e-48
MsG0180004733.01	MsG0480023649.01	0.827612	1.421087e-54	1.378710e-51
MsG0180004739.01	MsG0480023649.01	0.808853	2.525498e-50	1.459747e-47
MsG0180005137.01	MsG0480023649.01	0.835835	1.331199e-56	1.647363e-53
MsG0180005283.01	MsG0480023649.01	0.816949	4.247636e-52	3.052452e-49
MsG0180005349.01	MsG0480023649.01	0.803168	3.964760e-49	1.978641e-46
MsG0180005492.01	MsG0480023649.01	0.813089	3.053174e-51	1.974894e-48
MsG0180005612.01	MsG0480023649.01	0.822776	1.976925e-53	1.670723e-50
MsG0180005755.01	MsG0480023649.01	0.810317	1.224172e-50	7.355396e-48
MsG0180005760.01	MsG0480023649.01	0.848689	5.222115e-60	9.662026e-57
MsG0180005879.01	MsG0480023649.01	0.800993	1.110638e-48	5.245171e-46
MsG0180005918.01	MsG0480023649.01	-0.806127	9.563785e-50	5.150048e-47
MsG0180006042.01	MsG0480023649.01	0.823880	1.091271e-53	9.515052e-51
MsG0180006159.01	MsG0480023649.01	0.853455	2.362344e-61	5.107465e-58
MsG0180006223.01	MsG0480023649.01	0.844386	7.807508e-59	1.258320e-55
MsG0280011276.01	MsG0480023649.01	0.823675	1.219044e-53	1.056814e-50
MsG0380011632.01	MsG0480023649.01	0.801848	7.417776e-49	3.579473e-46
MsG0380011739.01	MsG0480023649.01	0.839649	1.396630e-57	1.941187e-54
MsG0380011896.01	MsG0480023649.01	0.810243	1.270050e-50	7.616418e-48
MsG0380012876.01	MsG0480023649.01	0.806649	7.423846e-50	4.050932e-47
MsG0380013111.01	MsG0480023649.01	0.801018	1.097585e-48	5.186759e-46
MsG0380013530.01	MsG0480023649.01	0.828042	1.120038e-54	1.100573e-51
MsG0380014386.01	MsG0480023649.01	0.807470	4.977016e-50	2.774522e-47
MsG0380014470.01	MsG0480023649.01	0.807402	5.144670e-50	2.862877e-47
MsG0380014588.01	MsG0480023649.01	0.805992	1.020982e-49	5.479257e-47
MsG0380014728.01	MsG0480023649.01	0.807769	4.300064e-50	2.415722e-47
MsG0380014729.01	MsG0480023649.01	0.828290	9.762955e-55	9.661842e-52
MsG0380014795.01	MsG0480023649.01	0.817032	4.070316e-52	2.931500e-49
MsG0380014909.01	MsG0480023649.01	0.818635	1.768235e-52	1.330762e-49
MsG0480018592.01	MsG0480023649.01	0.810677	1.023307e-50	6.208061e-48
MsG0480018631.01	MsG0480023649.01	0.807946	3.941722e-50	2.224733e-47
MsG0480018666.01	MsG0480023649.01	0.844860	5.821042e-59	9.522960e-56
MsG0480018676.01	MsG0480023649.01	0.821522	3.861512e-53	3.148801e-50
MsG0480018844.01	MsG0480023649.01	0.821727	3.461851e-53	2.839386e-50
MsG0480019501.01	MsG0480023649.01	0.832557	8.831502e-56	9.906409e-53
MsG0480019592.01	MsG0480023649.01	0.810244	1.269490e-50	7.613252e-48
MsG0480019641.01	MsG0480023649.01	0.837677	4.513659e-57	5.907252e-54
MsG0480019751.01	MsG0480023649.01	0.823252	1.530603e-53	1.310947e-50
MsG0480020122.01	MsG0480023649.01	0.852740	3.786522e-61	7.989912e-58
MsG0480020229.01	MsG0480023649.01	0.820875	5.442389e-53	4.359181e-50
MsG0480020363.01	MsG0480023649.01	0.824104	9.671961e-54	8.485614e-51
MsG0480020533.01	MsG0480023649.01	0.824239	8.988379e-54	7.916211e-51
MsG0480020690.01	MsG0480023649.01	0.800450	1.433382e-48	6.676138e-46
MsG0480020753.01	MsG0480023649.01	0.815415	9.355065e-52	6.445635e-49
MsG0480020888.01	MsG0480023649.01	0.830390	3.017920e-55	3.175146e-52
MsG0480021039.01	MsG0480023649.01	0.800783	1.225604e-48	5.756737e-46
MsG0480021101.01	MsG0480023649.01	0.808068	3.713679e-50	2.102795e-47
MsG0480021254.01	MsG0480023649.01	0.808658	2.779158e-50	1.598154e-47
MsG0480021260.01	MsG0480023649.01	0.811647	6.305673e-51	3.924582e-48
MsG0480021307.01	MsG0480023649.01	0.800270	1.559157e-48	7.229014e-46
MsG0480021308.01	MsG0480023649.01	0.836007	1.204401e-56	1.498184e-53
MsG0480021317.01	MsG0480023649.01	0.803319	3.689609e-49	1.848393e-46
MsG0480021597.01	MsG0480023649.01	0.809727	1.639794e-50	9.702363e-48
MsG0480021682.01	MsG0480023649.01	0.824658	7.163349e-54	6.386192e-51
MsG0480021709.01	MsG0480023649.01	0.807039	6.141395e-50	3.385349e-47
MsG0480021795.01	MsG0480023649.01	0.806337	8.638163e-50	4.676461e-47
MsG0480023166.01	MsG0480023649.01	0.818015	2.443786e-52	1.808029e-49
MsG0480023216.01	MsG0480023649.01	0.813299	2.745371e-51	1.786061e-48
MsG0480023298.01	MsG0480023649.01	0.803689	3.092646e-49	1.564174e-46
MsG0480023314.01	MsG0480023649.01	0.815305	9.895189e-52	6.797306e-49
MsG0480023351.01	MsG0480023649.01	0.826815	2.205019e-54	2.090351e-51
MsG0480023422.01	MsG0480023649.01	0.842085	3.207436e-58	4.809502e-55
MsG0480023483.01	MsG0480023649.01	0.808801	2.591058e-50	1.495567e-47
MsG0480023649.01	MsG0480023650.01	0.881226	2.861796e-70	1.662944e-66
MsG0480023649.01	MsG0480023821.01	0.800583	1.346681e-48	6.293595e-46
MsG0480023649.01	MsG0480023845.01	0.818970	1.483999e-52	1.127398e-49
MsG0480023649.01	MsG0480023863.01	-0.803754	2.998273e-49	1.518982e-46
MsG0480023649.01	MsG0480023881.01	0.816089	6.617076e-52	4.644368e-49
MsG0480023649.01	MsG0480023993.01	0.828775	7.452364e-55	7.479810e-52
MsG0480023649.01	MsG0580024385.01	0.810998	8.721032e-51	5.336720e-48
MsG0480023649.01	MsG0580024759.01	0.822793	1.958510e-53	1.655917e-50
MsG0480023649.01	MsG0580024950.01	0.852494	4.449062e-61	9.313295e-58
MsG0480023649.01	MsG0580024982.01	0.819848	9.360239e-53	7.286004e-50
MsG0480023649.01	MsG0580025373.01	0.835038	2.116968e-56	2.557725e-53
MsG0480023649.01	MsG0580025513.01	0.809220	2.107642e-50	1.230314e-47
MsG0480023649.01	MsG0580025589.01	0.818429	1.969161e-52	1.473727e-49
MsG0480023649.01	MsG0580025997.01	0.844202	8.749467e-59	1.402219e-55
MsG0480023649.01	MsG0580026211.01	0.848164	7.294832e-60	1.326766e-56
MsG0480023649.01	MsG0580027094.01	0.807178	5.737262e-50	3.174083e-47
MsG0480023649.01	MsG0580027183.01	0.801698	7.964876e-49	3.828642e-46
MsG0480023649.01	MsG0580027394.01	0.801803	7.577094e-49	3.652140e-46
MsG0480023649.01	MsG0580027887.01	0.832987	6.905257e-56	7.846309e-53
MsG0480023649.01	MsG0580027979.01	0.814228	1.714006e-51	1.143549e-48
MsG0480023649.01	MsG0580028306.01	0.820796	5.674890e-53	4.535116e-50
MsG0480023649.01	MsG0580028461.01	0.819140	1.357843e-52	1.036215e-49
MsG0480023649.01	MsG0580029918.01	0.803554	3.298695e-49	1.662692e-46
MsG0480023649.01	MsG0680030290.01	0.802489	5.476382e-49	2.686002e-46
MsG0480023649.01	MsG0680030627.01	0.829548	4.840374e-55	4.969644e-52
MsG0480023649.01	MsG0680030754.01	0.827813	1.271686e-54	1.241056e-51
MsG0480023649.01	MsG0680030767.01	0.826896	2.109510e-54	2.004536e-51
MsG0480023649.01	MsG0680030776.01	0.815645	8.313532e-52	5.764728e-49
MsG0480023649.01	MsG0680030957.01	0.853160	2.870092e-61	6.143203e-58
MsG0480023649.01	MsG0680031146.01	0.809563	1.778434e-50	1.047676e-47
MsG0480023649.01	MsG0680032515.01	0.800565	1.357674e-48	6.342058e-46
MsG0480023649.01	MsG0680033901.01	0.808685	2.742896e-50	1.578392e-47
MsG0480023649.01	MsG0680033902.01	0.803845	2.869508e-49	1.457246e-46
MsG0480023649.01	MsG0680035791.01	0.820451	6.810762e-53	5.391278e-50
MsG0480023649.01	MsG0780036711.01	0.824703	6.991784e-54	6.241196e-51
MsG0480023649.01	MsG0780036881.01	0.825059	5.760893e-54	5.194803e-51
MsG0480023649.01	MsG0780036909.01	0.804445	2.152840e-49	1.110192e-46
MsG0480023649.01	MsG0780037351.01	0.806628	7.501775e-50	4.091262e-47
MsG0480023649.01	MsG0780037363.01	0.814117	1.814041e-51	1.206640e-48
MsG0480023649.01	MsG0780037436.01	0.876457	1.375807e-68	6.675598e-65
MsG0480023649.01	MsG0780038571.01	0.808751	2.654732e-50	1.530351e-47
MsG0480023649.01	MsG0780038616.01	0.804607	1.992177e-49	1.031635e-46
MsG0480023649.01	MsG0780038756.01	0.817574	3.073101e-52	2.246262e-49
MsG0480023649.01	MsG0780038784.01	0.838816	2.297024e-57	3.112273e-54
MsG0480023649.01	MsG0780038839.01	0.806683	7.303456e-50	3.988864e-47
MsG0480023649.01	MsG0780038848.01	0.821787	3.353783e-53	2.755519e-50
MsG0480023649.01	MsG0780038986.01	0.808367	3.207049e-50	1.830398e-47
MsG0480023649.01	MsG0780039186.01	0.823251	1.531832e-53	1.311934e-50
MsG0480023649.01	MsG0780039449.01	0.819162	1.342573e-52	1.025197e-49
MsG0480023649.01	MsG0780039596.01	0.802974	4.348392e-49	2.159227e-46
MsG0480023649.01	MsG0780039675.01	0.800794	1.219246e-48	5.728502e-46
MsG0480023649.01	MsG0780039746.01	0.816003	6.916514e-52	4.843016e-49
MsG0480023649.01	MsG0780039859.01	0.810247	1.267486e-50	7.601900e-48
MsG0480023649.01	MsG0780039902.01	0.822135	2.785344e-53	2.311261e-50
MsG0480023649.01	MsG0780040158.01	0.801523	8.649288e-49	4.139501e-46
MsG0480023649.01	MsG0780040159.01	0.826743	2.294704e-54	2.170713e-51
MsG0480023649.01	MsG0780040343.01	0.819449	1.154857e-52	8.889853e-50
MsG0480023649.01	MsG0780040567.01	0.828014	1.137405e-54	1.116736e-51
MsG0480023649.01	MsG0780040644.01	0.817411	3.343852e-52	2.433464e-49
MsG0480023649.01	MsG0780040884.01	0.818462	1.935539e-52	1.449942e-49
MsG0480023649.01	MsG0780041035.01	0.801308	9.575176e-49	4.557765e-46
MsG0480023649.01	MsG0780041174.01	0.808930	2.430980e-50	1.407986e-47
MsG0480023649.01	MsG0780041249.01	0.818419	1.979543e-52	1.481118e-49
MsG0480023649.01	MsG0780041289.01	0.821207	4.565469e-53	3.690679e-50
MsG0480023649.01	MsG0780041706.01	0.828574	8.335422e-55	8.317993e-52
MsG0480023649.01	MsG0880041991.01	0.834672	2.617599e-56	3.127966e-53
MsG0480023649.01	MsG0880042043.01	0.830977	2.166927e-55	2.319579e-52
MsG0480023649.01	MsG0880042889.01	0.832658	8.334869e-56	9.377784e-53
MsG0480023649.01	MsG0880043032.01	0.825309	5.027775e-54	4.566017e-51
MsG0480023649.01	MsG0880043249.01	0.816536	5.258688e-52	3.736102e-49
MsG0480023649.01	MsG0880044228.01	0.819270	1.268731e-52	9.717363e-50
MsG0480023649.01	MsG0880044487.01	0.828475	8.807693e-55	8.764036e-52
MsG0480023649.01	MsG0880045073.01	0.803594	3.235037e-49	1.632307e-46
MsG0480023649.01	MsG0880045328.01	0.818382	2.017734e-52	1.508172e-49
MsG0480023649.01	MsG0880045361.01	0.804736	1.871986e-49	9.727303e-47
MsG0480023649.01	MsG0880045412.01	0.806441	8.215840e-50	4.459667e-47
MsG0480023649.01	MsG0880045648.01	0.833005	6.837789e-56	7.773427e-53
MsG0480023649.01	MsG0880046051.01	0.817066	3.997441e-52	2.881725e-49
MsG0480023649.01	MsG0880046252.01	0.838376	2.982678e-57	3.987482e-54
MsG0480023649.01	MsG0880046594.01	0.820196	7.792795e-53	6.125211e-50
MsG0480023649.01	MsG0880046765.01	0.800511	1.392371e-48	6.495278e-46
MsG0480023649.01	MsG0880046791.01	0.843093	1.731906e-58	2.680088e-55
MsG0480023649.01	MsG0880046854.01	0.800629	1.317563e-48	6.164784e-46
MsG0480023649.01	MsG0880046866.01	0.808915	2.449117e-50	1.417926e-47
MsG0480023649.01	MsG0880047392.01	0.825542	4.429741e-54	4.049441e-51
MsG0480023649.01	MsG0880047407.01	0.816534	5.261984e-52	3.738275e-49
MsG0480023649.01	MsG0880047567.01	0.815967	7.048631e-52	4.930575e-49
MsG0480023649.01	MsG0880047578.01	0.808846	2.533405e-50	1.464074e-47
MsG0480023649.01	MsG0880047616.01	0.802502	5.442500e-49	2.670293e-46
MsG0480023649.01	MsG0880047669.01	0.802148	6.436884e-49	3.129894e-46
MsG0480023649.01	MsG0880047723.01	0.819388	1.192429e-52	9.162689e-50
MsG0480023649.01	MsG0880047727.01	0.820618	6.236499e-53	4.958868e-50
MsG0380015077.01	MsG0480023649.01	0.810331	1.215898e-50	7.308356e-48
MsG0380015103.01	MsG0480023649.01	0.806117	9.610979e-50	5.174158e-47
MsG0380015541.01	MsG0480023649.01	-0.823227	1.551956e-53	1.328300e-50
MsG0380015603.01	MsG0480023649.01	0.821385	4.153686e-53	3.374212e-50
MsG0380015900.01	MsG0480023649.01	0.824844	6.474490e-54	5.802673e-51
MsG0380016188.01	MsG0480023649.01	-0.804673	1.929980e-49	1.001147e-46
MsG0380016452.01	MsG0480023649.01	0.835804	1.356004e-56	1.676396e-53
MsG0380016459.01	MsG0480023649.01	0.805427	1.341831e-49	7.097043e-47
MsG0380016530.01	MsG0480023649.01	0.810038	1.405627e-50	8.384992e-48
MsG0380016543.01	MsG0480023649.01	0.806113	9.628728e-50	5.183131e-47
MsG0380016544.01	MsG0480023649.01	0.806084	9.765929e-50	5.253130e-47
MsG0380016623.01	MsG0480023649.01	0.801706	7.933887e-49	3.814572e-46
MsG0380016699.01	MsG0480023649.01	0.810132	1.341626e-50	8.022505e-48
MsG0380016764.01	MsG0480023649.01	0.820010	8.598179e-53	6.723255e-50
MsG0380017028.01	MsG0480023649.01	0.806739	7.105717e-50	3.886724e-47
MsG0380017143.01	MsG0480023649.01	0.824896	6.294407e-54	5.649879e-51
MsG0380017309.01	MsG0480023649.01	0.814272	1.676534e-51	1.119905e-48
MsG0380017651.01	MsG0480023649.01	0.806512	7.935540e-50	4.315324e-47
MsG0380017966.01	MsG0480023649.01	0.809764	1.610400e-50	9.537904e-48
MsG0380017976.01	MsG0480023649.01	0.837520	4.951454e-57	6.448682e-54
MsG0380018027.01	MsG0480023649.01	0.802979	4.337993e-49	2.154357e-46
MsG0380018037.01	MsG0480023649.01	0.821858	3.228911e-53	2.658359e-50
MsG0480018108.01	MsG0480023649.01	0.813985	1.939704e-51	1.285568e-48
MsG0480018323.01	MsG0480023649.01	0.845327	4.352839e-59	7.228566e-56
MsG0280006587.01	MsG0480023649.01	0.800807	1.211867e-48	5.695716e-46
MsG0280006607.01	MsG0480023649.01	0.807751	4.338467e-50	2.436209e-47
MsG0280006706.01	MsG0480023649.01	0.827123	1.860903e-54	1.780034e-51
MsG0280006718.01	MsG0480023649.01	0.836041	1.180753e-56	1.470293e-53
MsG0280006805.01	MsG0480023649.01	0.813947	1.977575e-51	1.309347e-48
MsG0280006825.01	MsG0480023649.01	0.808129	3.603929e-50	2.043989e-47
MsG0280007079.01	MsG0480023649.01	0.811531	6.682386e-51	4.146704e-48
MsG0280007102.01	MsG0480023649.01	0.821105	4.818247e-53	3.883962e-50
MsG0280007502.01	MsG0480023649.01	0.802762	4.809726e-49	2.375649e-46
MsG0280007628.01	MsG0480023649.01	0.848155	7.338955e-60	1.334359e-56
MsG0280007703.01	MsG0480023649.01	0.833488	5.180601e-56	5.975074e-53
MsG0280007754.01	MsG0480023649.01	0.817579	3.065054e-52	2.240710e-49
MsG0280007800.01	MsG0480023649.01	0.831583	1.537652e-55	1.675944e-52
MsG0280007852.01	MsG0480023649.01	0.822793	1.958585e-53	1.655962e-50
MsG0280007853.01	MsG0480023649.01	0.830893	2.271734e-55	2.425856e-52
MsG0280008227.01	MsG0480023649.01	0.821001	5.092951e-53	4.093743e-50
MsG0280008430.01	MsG0480023649.01	0.806016	1.009597e-49	5.421294e-47
MsG0280008591.01	MsG0480023649.01	0.822656	2.107520e-53	1.775082e-50
MsG0280008935.01	MsG0480023649.01	0.814513	1.482636e-51	9.969106e-49
MsG0280009430.01	MsG0480023649.01	0.834221	3.397874e-56	4.005897e-53
MsG0280009431.01	MsG0480023649.01	0.847715	9.706059e-60	1.740543e-56
MsG0280009756.01	MsG0480023649.01	0.826119	3.230941e-54	3.002595e-51
MsG0280009775.01	MsG0480023649.01	0.803025	4.245245e-49	2.110714e-46
MsG0280010353.01	MsG0480023649.01	0.828464	8.861112e-55	8.814429e-52
MsG0280010356.01	MsG0480023649.01	0.831469	1.640538e-55	1.781963e-52
MsG0280010376.01	MsG0480023649.01	0.837567	4.817625e-57	6.282932e-54
MsG0280010417.01	MsG0480023649.01	-0.820263	7.521033e-53	5.922286e-50
MsG0280010496.01	MsG0480023649.01	0.805466	1.316967e-49	6.972578e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023649.01.T01	MTR_8g098335	91.406	128	11	0	1	128	445	572	1.52e-79	244
MsG0480023649.01.T01	MTR_7g077740	31.538	130	83	3	5	128	783	912	2.33e-11	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 20 sgRNAs with CRISPR-Local

Find 28 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACAAGCTGTTGTAATGTTAT+TGG	0.222383	4:+88087690	None:intergenic
ACAACACATGCTTGGAAGTT+TGG	0.253601	4:+88087777	None:intergenic
ATTACAACAGCTTGTTGAAA+GGG	0.423151	4:-88087682	MsG0480023649.01.T01:CDS
GTATATCATCGAATGTTTCA+TGG	0.442276	4:-88087847	MsG0480023649.01.T01:CDS
TCCATTCACTTCATCAAAAG+TGG	0.447779	4:+88087908	None:intergenic
ATGTGTTGTGAGGAAAGTTT+TGG	0.462231	4:-88087763	MsG0480023649.01.T01:CDS
CTTTCCTCACAACACATGCT+TGG	0.474299	4:+88087769	None:intergenic
CATTACAACAGCTTGTTGAA+AGG	0.512663	4:-88087683	MsG0480023649.01.T01:CDS
TGTTGTAATGTTATTGGTGA+TGG	0.522358	4:+88087696	None:intergenic
CAATTTCTTCTGCATCAACA+TGG	0.524519	4:+88087628	None:intergenic
ACTTGGCCAGACGTGAATCA+TGG	0.524559	4:-88087659	MsG0480023649.01.T01:CDS
AGTCATCCATGATTCACGTC+TGG	0.529300	4:+88087653	None:intergenic
AATGTTATTGGTGATGGATG+AGG	0.570884	4:+88087702	None:intergenic
ACAGCTTGTTGAAAGGGACT+TGG	0.590760	4:-88087676	MsG0480023649.01.T01:CDS
GATGATATACTCATGCAAGA+TGG	0.600077	4:+88087860	None:intergenic
ATGTTATTGGTGATGGATGA+GGG	0.600743	4:+88087703	None:intergenic
AGAAGAAATTGCAATGGAGG+TGG	0.605756	4:-88087616	MsG0480023649.01.T01:CDS
ACTTCCAAGCATGTGTTGTG+AGG	0.626643	4:-88087773	MsG0480023649.01.T01:CDS
TGCAGAAGAAATTGCAATGG+AGG	0.645966	4:-88087619	MsG0480023649.01.T01:CDS
TGATGCAGAAGAAATTGCAA+TGG	0.674423	4:-88087622	MsG0480023649.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	GGATTTCTTGATGAAAAATA+GGG	+	Chr4:88087683-88087702	None:intergenic	25.0%
!	TGGATTTCTTGATGAAAAAT+AGG	+	Chr4:88087684-88087703	None:intergenic	25.0%
	ACAAGCTGTTGTAATGTTAT+TGG	+	Chr4:88087791-88087810	None:intergenic	30.0%
	GTATATCATCGAATGTTTCA+TGG	-	Chr4:88087631-88087650	MsG0480023649.01.T01:CDS	30.0%
	TGTTGTAATGTTATTGGTGA+TGG	+	Chr4:88087785-88087804	None:intergenic	30.0%
!!	ATTACAACAGCTTGTTGAAA+GGG	-	Chr4:88087796-88087815	MsG0480023649.01.T01:CDS	30.0%
!!!	GAAAAATGTTTTGGAAACAC+TGG	-	Chr4:88087886-88087905	MsG0480023649.01.T01:CDS	30.0%
	AGATGGTACTGTCAAAAAGT+TGG	+	Chr4:88087604-88087623	None:intergenic	35.0%
	AGGGTGAAAAATCACTATTC+TGG	+	Chr4:88087664-88087683	None:intergenic	35.0%
	CAATTTCTTCTGCATCAACA+TGG	+	Chr4:88087853-88087872	None:intergenic	35.0%
	GATGATATACTCATGCAAGA+TGG	+	Chr4:88087621-88087640	None:intergenic	35.0%
	TCCATTCACTTCATCAAAAG+TGG	+	Chr4:88087573-88087592	None:intergenic	35.0%
	TGATGCAGAAGAAATTGCAA+TGG	-	Chr4:88087856-88087875	MsG0480023649.01.T01:CDS	35.0%
!	ATGTGTTGTGAGGAAAGTTT+TGG	-	Chr4:88087715-88087734	MsG0480023649.01.T01:CDS	35.0%
!!	AATGTTATTGGTGATGGATG+AGG	+	Chr4:88087779-88087798	None:intergenic	35.0%
!!	ATGTTATTGGTGATGGATGA+GGG	+	Chr4:88087778-88087797	None:intergenic	35.0%
!!	CATTACAACAGCTTGTTGAA+AGG	-	Chr4:88087795-88087814	MsG0480023649.01.T01:CDS	35.0%
!!	TCCACTTTTGATGAAGTGAA+TGG	-	Chr4:88087569-88087588	MsG0480023649.01.T01:CDS	35.0%
!!!	TGTTTTGGAAACACTGGTTT+TGG	-	Chr4:88087892-88087911	MsG0480023649.01.T01:CDS	35.0%
	ACAACACATGCTTGGAAGTT+TGG	+	Chr4:88087704-88087723	None:intergenic	40.0%
	AGAAGAAATTGCAATGGAGG+TGG	-	Chr4:88087862-88087881	MsG0480023649.01.T01:CDS	40.0%
	TGCAGAAGAAATTGCAATGG+AGG	-	Chr4:88087859-88087878	MsG0480023649.01.T01:CDS	40.0%
!	GGAGGTGGAGAAAAATGTTT+TGG	-	Chr4:88087877-88087896	MsG0480023649.01.T01:CDS	40.0%
	ACTTCCAAGCATGTGTTGTG+AGG	-	Chr4:88087705-88087724	MsG0480023649.01.T01:CDS	45.0%
	AGTCATCCATGATTCACGTC+TGG	+	Chr4:88087828-88087847	None:intergenic	45.0%
	CTTTCCTCACAACACATGCT+TGG	+	Chr4:88087712-88087731	None:intergenic	45.0%
!!	ACAGCTTGTTGAAAGGGACT+TGG	-	Chr4:88087802-88087821	MsG0480023649.01.T01:CDS	45.0%
	ACTTGGCCAGACGTGAATCA+TGG	-	Chr4:88087819-88087838	MsG0480023649.01.T01:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	88087557	88087943	88087557	ID=MsG0480023649.01;Name=MsG0480023649.01
Chr4	mRNA	88087557	88087943	88087557	ID=MsG0480023649.01.T01;Parent=MsG0480023649.01;Name=MsG0480023649.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|128
Chr4	exon	88087557	88087943	88087557	ID=MsG0480023649.01.T01:exon:6450;Parent=MsG0480023649.01.T01
Chr4	CDS	88087557	88087943	88087557	ID=MsG0480023649.01.T01:cds;Parent=MsG0480023649.01.T01

Gene Sequence

>MsG0480023649.01.T01

ATGGATTCTTCATCCACTTTTGATGAAGTGAATGGATTGACTGACCAACTTTTTGACAGTACCATCTTGCATGAGTATATCATCGAATGTTTCATGGAGTTATACCAGAATAGTGATTTTTCACCCTATTTTTCATCAAGAAATCCAAACTTCCAAGCATGTGTTGTGAGGAAAGTTTTGGTTAGACAGATTAATGAACTTGTTAAACTTCACTTTTTCCCTCATCCATCACCAATAACATTACAACAGCTTGTTGAAAGGGACTTGGCCAGACGTGAATCATGGATGACTATCCATGTTGATGCAGAAGAAATTGCAATGGAGGTGGAGAAAAATGTTTTGGAAACACTGGTTTTGGAAATCGTGTCTGAGATGACTATATCATAG

Protein sequence

>MsG0480023649.01.T01

MDSSSTFDEVNGLTDQLFDSTILHEYIIECFMELYQNSDFSPYFSSRNPNFQACVVRKVLVRQINELVKLHFFPHPSPITLQQLVERDLARRESWMTIHVDAEEIAMEVEKNVLETLVLEIVSEMTIS*