AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009434.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009434.01.T01 MTR_2g062790 63.675 234 45 6 270 464 340 572 2.96e-79 263
MsG0280009434.01.T01 MTR_2g062790 58.636 220 19 5 1 188 153 332 1.57e-63 221
MsG0280009434.01.T01 MTR_2g062790 98.276 58 1 0 464 521 687 744 1.02e-29 124
MsG0280009434.01.T01 MTR_1g057830 91.667 72 4 2 394 464 122 192 3.53e-34 132
MsG0280009434.01.T01 MTR_1g057830 90.323 62 6 0 460 521 303 364 5.05e-30 121
MsG0280009434.01.T01 MTR_1g103570 48.936 94 22 3 189 256 47 140 1.86e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009434.01.T01 AT1G54350 51.818 220 34 5 1 188 116 295 1.62e-53 192
MsG0280009434.01.T01 AT1G54350 45.957 235 75 8 270 464 303 525 1.14e-44 167
MsG0280009434.01.T01 AT1G54350 51.786 56 27 0 464 519 638 693 9.66e-12 68.2

Find 122 sgRNAs with CRISPR-Local

Find 528 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGACGTGAATCCTCTTTAA+AGG 0.187242 2:-51876101 MsG0280009434.01.T01:CDS
CAATTAGCAAGTACCGAATT+TGG 0.187938 2:+51879685 None:intergenic
ACACCTTAGTGCATTTAAAT+TGG 0.204067 2:+51875816 None:intergenic
TACATAGTATATGATCTTTC+CGG 0.212636 2:+51878444 None:intergenic
CTCTTCTATGAGTGTTTCTA+TGG 0.214741 2:+51875931 None:intergenic
TACTACTTGGGTGGCTTTGC+TGG 0.236788 2:-51884121 MsG0280009434.01.T01:CDS
GCACATTGCTGCACTTTATT+AGG 0.249806 2:-51884084 MsG0280009434.01.T01:CDS
AACAGCCCTTTCTTTCTCTT+TGG 0.272720 2:-51883192 MsG0280009434.01.T01:CDS
ATTTGGGTACTTCAGCATAT+TGG 0.276529 2:+51879702 None:intergenic
GCTGATTTCTTCTAGAAATC+TGG 0.291668 2:-51880829 MsG0280009434.01.T01:CDS
CAAACAATGAACAGCCAAAT+TGG 0.291996 2:-51876138 MsG0280009434.01.T01:CDS
CTGGAATACAATGATGAATA+AGG 0.319831 2:+51883387 None:intergenic
AGGTTATGGCTGTTGGTCTA+TGG 0.320803 2:-51878477 MsG0280009434.01.T01:CDS
TTTGGGTACTTCAGCATATT+GGG 0.322429 2:+51879703 None:intergenic
TTATGGACTTGTACGGGTTC+GGG 0.324633 2:-51882881 MsG0280009434.01.T01:CDS
AAAACATCTTATTAAGGTTA+TGG 0.325040 2:-51878491 MsG0280009434.01.T01:CDS
CATCCGTACTCTGAAAATTA+TGG 0.326051 2:+51876016 None:intergenic
AAGTGCAAAACATCTTATTA+AGG 0.326244 2:-51878497 MsG0280009434.01.T01:CDS
GTTATGGACTTGTACGGGTT+CGG 0.326593 2:-51882882 MsG0280009434.01.T01:CDS
TATAACAATAACAAGTTTCC+TGG 0.329611 2:+51875977 None:intergenic
TTAGAGATTTGTGGAGATTT+CGG 0.332223 2:-51881617 MsG0280009434.01.T01:CDS
GCTGAGTCAATTGCTTTCTA+TGG 0.332810 2:-51882853 MsG0280009434.01.T01:CDS
TAGAAATGTATGATTGTTGC+AGG 0.332961 2:-51876076 MsG0280009434.01.T01:three_prime_UTR
CCTCCGTCTCTGCCACAAAA+TGG 0.333288 2:+51881739 None:intergenic
GTTACGGTGGTGATAGTAAT+TGG 0.336116 2:-51881534 MsG0280009434.01.T01:CDS
GTGGGTTCGATGTGCCAATT+TGG 0.336932 2:+51876124 None:intergenic
AAGATCATATACTATGTAAA+AGG 0.341820 2:-51878439 MsG0280009434.01.T01:CDS
TTTCATTGAGATGGAGGTCT+TGG 0.352402 2:-51883331 MsG0280009434.01.T01:CDS
CAAGCAGCTACTTTACTACT+TGG 0.353577 2:-51884134 MsG0280009434.01.T01:CDS
TTTGATCAGTTAGAGATTTG+TGG 0.369310 2:-51881626 MsG0280009434.01.T01:intron
AGTATTCACATCTGAACTAA+TGG 0.378490 2:+51878396 None:intergenic
TTTGTGGAGATTTCGGTTGC+CGG 0.383194 2:-51881610 MsG0280009434.01.T01:CDS
ATAGGCAGAGGCTTGGAATA+AGG 0.383473 2:+51883418 None:intergenic
TCCACCGCATCGGCGTCTAA+TGG 0.384282 2:+51881781 None:intergenic
TCATCAACAATTCGCTGGTC+TGG 0.393279 2:+51883233 None:intergenic
AGAGAAAGAAAGGGCTGTTC+CGG 0.394846 2:+51883196 None:intergenic
TCTGCTGTCATTAATCGGTT+AGG 0.396603 2:-51880627 MsG0280009434.01.T01:intron
AAGGAAGCAGACTTTCGTTA+TGG 0.399242 2:-51882898 MsG0280009434.01.T01:CDS
GTTGCTCCCATGTATTTCTC+TGG 0.404905 2:-51880753 MsG0280009434.01.T01:CDS
AATTAGCAAGTACCGAATTT+GGG 0.407861 2:+51879686 None:intergenic
ACTGAATGAGATCAAGTCTA+TGG 0.420267 2:+51883154 None:intergenic
CTTATTAAGGTTATGGCTGT+TGG 0.431059 2:-51878484 MsG0280009434.01.T01:CDS
AAGCACTTATAGCTTGAAAC+TGG 0.436695 2:+51880652 None:intergenic
TAAATTTCTTGCAAGAGAAA+AGG 0.444506 2:-51882917 MsG0280009434.01.T01:CDS
GAGAAACTCTTTCATTGAGA+TGG 0.445852 2:-51883340 MsG0280009434.01.T01:CDS
GTGGCAGAGACGGAGGGAAC+CGG 0.459862 2:-51881732 MsG0280009434.01.T01:CDS
AAATCCATCAGCAGAAAATC+CGG 0.460996 2:-51878346 MsG0280009434.01.T01:CDS
TATGCTGAAGTACCCAAATT+CGG 0.461329 2:-51879698 MsG0280009434.01.T01:intron
ATGAATAAGGTTAGAAACAT+AGG 0.464232 2:+51883400 None:intergenic
AGAGTGCCAAAGAGAAAGAA+AGG 0.464970 2:+51883186 None:intergenic
GCTGTTGGTCTATGGAGAAC+TGG 0.465720 2:-51878469 MsG0280009434.01.T01:CDS
CCTACCTCAAAAGCCGTACA+TGG 0.467676 2:-51878314 MsG0280009434.01.T01:intron
ACTTTCGTTATGGACTTGTA+CGG 0.468756 2:-51882888 MsG0280009434.01.T01:CDS
TTTCTTTGGAAGGTGTGGTT+CGG 0.474765 2:-51879759 MsG0280009434.01.T01:intron
GCTTGCTAGTGCGGTGTTTG+TGG 0.482903 2:-51881571 MsG0280009434.01.T01:CDS
TGGCTGTTCATTGTTTGAAT+CGG 0.483100 2:+51876144 None:intergenic
TCTGTCATGGAAGTTGCATA+AGG 0.489406 2:+51876186 None:intergenic
TAAAGAGGATTCACGTCTAG+TGG 0.489949 2:+51876105 None:intergenic
TCATATACTATGTAAAAGGC+GGG 0.491506 2:-51878435 MsG0280009434.01.T01:CDS
GTTGCCGGATTCAACATTGC+CGG 0.492014 2:-51881595 MsG0280009434.01.T01:CDS
AGCTCCGGCAATGTTGAATC+CGG 0.492144 2:+51881591 None:intergenic
TTACATGGATCGCTACTTGA+AGG 0.492972 2:-51883297 MsG0280009434.01.T01:CDS
CATCCAATTTAAATGCACTA+AGG 0.493068 2:-51875819 MsG0280009434.01.T01:three_prime_UTR
TACGAAAAGATTGCAGCAGC+GGG 0.497494 2:-51876241 MsG0280009434.01.T01:CDS
GGTCTATGGAGAACTGGAAC+CGG 0.497854 2:-51878463 MsG0280009434.01.T01:CDS
TGGCTTTGCTGGAGGAATCC+CGG 0.504424 2:-51884110 MsG0280009434.01.T01:CDS
ACATTTCTAAACCTTTAAAG+AGG 0.505070 2:+51876090 None:intergenic
AGACGCCGATGCGGTGGAGG+AGG 0.510019 2:-51881776 MsG0280009434.01.T01:CDS
CTTTCGTTATGGACTTGTAC+GGG 0.519129 2:-51882887 MsG0280009434.01.T01:CDS
AAGTGCAGCAATGTGCTCAC+CGG 0.524239 2:+51884091 None:intergenic
GGCATAACATACATTAGTGT+TGG 0.526211 2:-51876220 MsG0280009434.01.T01:CDS
CGTATAGGGGTAAAGAGCTT+CGG 0.526914 2:-51880108 MsG0280009434.01.T01:intron
GATGATCTAAGTTCTTTCAC+CGG 0.529116 2:-51883215 MsG0280009434.01.T01:CDS
TACTTGGGTGGCTTTGCTGG+AGG 0.532060 2:-51884118 MsG0280009434.01.T01:CDS
ATTAGACGCCGATGCGGTGG+AGG 0.533652 2:-51881779 MsG0280009434.01.T01:CDS
GAGTCAATTGCTTTCTATGG+TGG 0.534909 2:-51882850 MsG0280009434.01.T01:CDS
AAGCAGCTACTTTACTACTT+GGG 0.537842 2:-51884133 MsG0280009434.01.T01:CDS
CAGCTACTTTACTACTTGGG+TGG 0.538042 2:-51884130 MsG0280009434.01.T01:CDS
TAGAAACATAGGCAGAGGCT+TGG 0.538518 2:+51883411 None:intergenic
ATAACAATAACAAGTTTCCT+GGG 0.543501 2:+51875978 None:intergenic
AATCGGTTGTAGATATGCGT+AGG 0.546840 2:+51876161 None:intergenic
ACGTGCCTCCTCCACCGCAT+CGG 0.547840 2:+51881771 None:intergenic
ATGGGAGCAACAACAGCAGC+AGG 0.550352 2:+51880765 None:intergenic
AAGAGTACCCAAACCATGTA+CGG 0.553970 2:+51878301 None:intergenic
GAGTGCCAAAGAGAAAGAAA+GGG 0.554199 2:+51883187 None:intergenic
CGTGTGATTCCTCATCTCTC+CGG 0.556623 2:+51881713 None:intergenic
TTAGATCATCAACAATTCGC+TGG 0.561218 2:+51883228 None:intergenic
AAACTCTTTCATTGAGATGG+AGG 0.566123 2:-51883337 MsG0280009434.01.T01:CDS
TTGGATGACGAGGTATTACA+TGG 0.566640 2:-51883312 MsG0280009434.01.T01:CDS
ATCATATACTATGTAAAAGG+CGG 0.569322 2:-51878436 MsG0280009434.01.T01:CDS
GGATGCAGCGATGATTGTTA+CGG 0.569589 2:-51881550 MsG0280009434.01.T01:CDS
AGTGCAGCAATGTGCTCACC+GGG 0.571093 2:+51884092 None:intergenic
TCCATTAGACGCCGATGCGG+TGG 0.573247 2:-51881782 MsG0280009434.01.T01:CDS
AATGACATAGCGGTAACCAT+TGG 0.575192 2:+51880797 None:intergenic
GTGATATATCTGAAGATCGT+GGG 0.577030 2:-51878369 MsG0280009434.01.T01:CDS
AAGGTTAGAAACATAGGCAG+AGG 0.578458 2:+51883406 None:intergenic
AACACCGCACTAGCAAGCTC+CGG 0.582371 2:+51881576 None:intergenic
AATCTGGAGTTCTTCACCAA+TGG 0.584185 2:-51880813 MsG0280009434.01.T01:CDS
TGGTACGCGGTACAGGTTCG+CGG 0.587526 2:-51880156 MsG0280009434.01.T01:intron
ATTGCCGGAGCTTGCTAGTG+CGG 0.590474 2:-51881580 MsG0280009434.01.T01:CDS
AAAGAGGATTCACGTCTAGT+GGG 0.590928 2:+51876106 None:intergenic
AGATGCAACTTCTTCTGCAG+CGG 0.593320 2:-51882816 MsG0280009434.01.T01:intron
TGTCATCATGTAGATTTCCC+AGG 0.608163 2:-51875995 MsG0280009434.01.T01:three_prime_UTR
AGAAATGTATGATTGTTGCA+GGG 0.610554 2:-51876075 MsG0280009434.01.T01:three_prime_UTR
CGGAGGGAACCGGAGAGATG+AGG 0.614319 2:-51881722 MsG0280009434.01.T01:CDS
CGTGATATATCTGAAGATCG+TGG 0.617035 2:-51878370 MsG0280009434.01.T01:CDS
GTACGAAAAGATTGCAGCAG+CGG 0.617171 2:-51876242 MsG0280009434.01.T01:CDS
TAAGTTTATTATGCAAGACA+AGG 0.628100 2:-51884179 None:intergenic
ACTTGTGCTTGTGATGATGA+TGG 0.630711 2:-51881502 MsG0280009434.01.T01:intron
CATATACTATGTAAAAGGCG+GGG 0.635401 2:-51878434 MsG0280009434.01.T01:CDS
TTTACAGACAACAGTACCAG+TGG 0.645922 2:-51878520 MsG0280009434.01.T01:intron
ATTTCCATTAGACGCCGATG+CGG 0.646987 2:-51881785 MsG0280009434.01.T01:CDS
CATACATTAGTGTTGGCCAT+CGG 0.648954 2:-51876213 MsG0280009434.01.T01:CDS
CGGAGAGATGAGGAATCACA+CGG 0.657872 2:-51881712 MsG0280009434.01.T01:intron
ATATGCGTAGGATTCTGTCA+TGG 0.666790 2:+51876173 None:intergenic
GATGGAGGTCTTGGATGACG+AGG 0.669239 2:-51883322 MsG0280009434.01.T01:CDS
CGATCTTCAGATATATCACG+AGG 0.678508 2:+51878373 None:intergenic
TGCAGCGATGATTGTTACGG+TGG 0.688157 2:-51881547 MsG0280009434.01.T01:CDS
AGTTGCATAAGGTTGACCGA+TGG 0.689538 2:+51876197 None:intergenic
CAATGAGAGAAAAGTCACCA+AGG 0.699409 2:+51880679 None:intergenic
TGGGTACGCATGAATTCACG+TGG 0.702015 2:+51879722 None:intergenic
GAAGAACTTGAATGACATAG+CGG 0.742392 2:+51880787 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAAATTAATTGAATATTTA+AGG + Chr2:51880824-51880843 None:intergenic 10.0%
!!! AATATTCAATTAATTTGAAA+TGG - Chr2:51880826-51880845 MsG0280009434.01.T01:CDS 10.0%
!!! ATAAAACTATTGATATATTT+TGG - Chr2:51882554-51882573 MsG0280009434.01.T01:intron 10.0%
!!! ATAATTGTGTTATTATTTTT+AGG - Chr2:51877724-51877743 MsG0280009434.01.T01:intron 10.0%
!!! CAAAAGTTTTATATAAAAAA+AGG - Chr2:51880574-51880593 MsG0280009434.01.T01:intron 10.0%
!!! TAATTGTGTTATTATTTTTA+GGG - Chr2:51877725-51877744 MsG0280009434.01.T01:intron 10.0%
!! AAAAAATAGAAAGAAGAAAT+GGG - Chr2:51877896-51877915 MsG0280009434.01.T01:intron 15.0%
!! AAAAATTACGTTATAATTTC+TGG + Chr2:51882404-51882423 None:intergenic 15.0%
!! AAACATATAAAAAAAACTGT+AGG - Chr2:51881370-51881389 MsG0280009434.01.T01:intron 15.0%
!! AAATAATATATTTAATTGCG+CGG + Chr2:51881764-51881783 None:intergenic 15.0%
!! AAATTATTATTTGTAGGTTA+AGG - Chr2:51880377-51880396 MsG0280009434.01.T01:intron 15.0%
!! AAGAAATGGTAAATTAAATA+GGG - Chr2:51880478-51880497 MsG0280009434.01.T01:intron 15.0%
!! ACAAATTATAAAAAAAGGTA+TGG + Chr2:51881805-51881824 None:intergenic 15.0%
!! ATAATAAATAAATGGTGAAT+TGG + Chr2:51880123-51880142 None:intergenic 15.0%
!! ATGTAAACAAAACTATTTAA+AGG + Chr2:51876969-51876988 None:intergenic 15.0%
!! ATGTATGATTGATAAAAATA+AGG + Chr2:51878590-51878609 None:intergenic 15.0%
!! CAATTCAAATTATTATTTGT+AGG - Chr2:51880371-51880390 MsG0280009434.01.T01:intron 15.0%
!! CTACAAATAATAATTTGAAT+TGG + Chr2:51880373-51880392 None:intergenic 15.0%
!! GCATAACAAATTATAAAAAA+AGG + Chr2:51881810-51881829 None:intergenic 15.0%
!! TAACATACTAATAATATCAA+CGG + Chr2:51883011-51883030 None:intergenic 15.0%
!! TAAGAAATGGTAAATTAAAT+AGG - Chr2:51880477-51880496 MsG0280009434.01.T01:intron 15.0%
!!! AAATTATAACGTAATTTTTG+TGG - Chr2:51882405-51882424 MsG0280009434.01.T01:intron 15.0%
!!! AACATATTTTTAATATATGC+AGG - Chr2:51881088-51881107 MsG0280009434.01.T01:intron 15.0%
!!! AATTATAACGTAATTTTTGT+GGG - Chr2:51882406-51882425 MsG0280009434.01.T01:intron 15.0%
!!! ATTAATAGCTTAGTTATTTT+TGG - Chr2:51876367-51876386 MsG0280009434.01.T01:intron 15.0%
!!! TATTATTGAAGAAGTATTAT+TGG - Chr2:51882488-51882507 MsG0280009434.01.T01:intron 15.0%
!!! TTTTTTCGTAAGTTAAATAA+TGG - Chr2:51879021-51879040 MsG0280009434.01.T01:intron 15.0%
!! AAAACATCTTATTAAGGTTA+TGG - Chr2:51881453-51881472 MsG0280009434.01.T01:intron 20.0%
!! AAAAGTAAAAAAAGGTCAAT+AGG - Chr2:51878497-51878516 MsG0280009434.01.T01:CDS 20.0%
!! AAACAATTCTTAAAGATCAA+AGG + Chr2:51876091-51876110 None:intergenic 20.0%
!! AAATACTTTCTCTTAGAATT+TGG + Chr2:51882365-51882384 None:intergenic 20.0%
!! AACTTAAGTTTAGATAAATC+AGG - Chr2:51882769-51882788 MsG0280009434.01.T01:intron 20.0%
!! AAGATCATATACTATGTAAA+AGG - Chr2:51881505-51881524 MsG0280009434.01.T01:CDS 20.0%
!! AATAACTGTCATAAATGAAA+TGG - Chr2:51882656-51882675 MsG0280009434.01.T01:intron 20.0%
!! AATAATATATTTAATTGCGC+GGG + Chr2:51881763-51881782 None:intergenic 20.0%
!! AATACTTTCTCTTAGAATTT+GGG + Chr2:51882364-51882383 None:intergenic 20.0%
!! ACATATTATTCATGATTAGT+TGG - Chr2:51877525-51877544 MsG0280009434.01.T01:intron 20.0%
!! AGAAATGGTAAATTAAATAG+GGG - Chr2:51880479-51880498 MsG0280009434.01.T01:intron 20.0%
!! AGATATTACAAACTATTAAG+AGG - Chr2:51879508-51879527 MsG0280009434.01.T01:intron 20.0%
!! AGATTGACATAAATAAGAAT+CGG - Chr2:51880891-51880910 MsG0280009434.01.T01:intron 20.0%
!! CAAAAAATAGAAAGAAGAAA+TGG - Chr2:51877895-51877914 MsG0280009434.01.T01:intron 20.0%
!! CAAAACTTATAAGTTTATGA+AGG + Chr2:51878799-51878818 None:intergenic 20.0%
!! GAAAGAAAAAAAAACTTTGT+TGG - Chr2:51877969-51877988 MsG0280009434.01.T01:intron 20.0%
!! TAAATTGTTCAATGATTAGT+TGG - Chr2:51877496-51877515 MsG0280009434.01.T01:intron 20.0%
!!! AAAACTTTTTTATAGCCTTA+TGG + Chr2:51883450-51883469 None:intergenic 20.0%
!!! ATAGTTTTGTTTACATTTAC+TGG - Chr2:51876973-51876992 MsG0280009434.01.T01:intron 20.0%
!!! ATATATAGAAGGGAAATTTT+GGG + Chr2:51879580-51879599 None:intergenic 20.0%
!!! ATTCAATTAATTTGAAATGG+AGG - Chr2:51880829-51880848 MsG0280009434.01.T01:CDS 20.0%
!!! CATTTCTTCTTTCTATTTTT+TGG + Chr2:51877897-51877916 None:intergenic 20.0%
!!! GAATACGCTTTTATAAATTT+AGG - Chr2:51884035-51884054 MsG0280009434.01.T01:intron 20.0%
!!! TGATGATGGTATAAAATTTA+AGG - Chr2:51878456-51878475 MsG0280009434.01.T01:CDS 20.0%
!!! TTCAATTAATTTGAAATGGA+GGG - Chr2:51880830-51880849 MsG0280009434.01.T01:CDS 20.0%
!!! TTGATGTTCTTTTTTTCTTT+TGG + Chr2:51879896-51879915 None:intergenic 20.0%
!!! TTTTCTTTTAAAACTGTTGT+TGG - Chr2:51877204-51877223 MsG0280009434.01.T01:intron 20.0%
! AAAAAAAGGAAATCTCAAAG+TGG - Chr2:51880588-51880607 MsG0280009434.01.T01:intron 25.0%
! AAAAAAGGAAATCTCAAAGT+GGG - Chr2:51880589-51880608 MsG0280009434.01.T01:intron 25.0%
! AAATAGACTATTACTTTACC+TGG + Chr2:51876899-51876918 None:intergenic 25.0%
! AAATGCAAATTATGTGACTA+TGG + Chr2:51879764-51879783 None:intergenic 25.0%
! AAATTACGGATACTAAGAAA+TGG - Chr2:51880464-51880483 MsG0280009434.01.T01:intron 25.0%
! AACAAACAAATTAAGTGAGT+GGG + Chr2:51877372-51877391 None:intergenic 25.0%
! AACAATTACTTTATCCAACT+TGG - Chr2:51881670-51881689 MsG0280009434.01.T01:intron 25.0%
! AAGTGCAAAACATCTTATTA+AGG - Chr2:51881447-51881466 MsG0280009434.01.T01:intron 25.0%
! ACAAATCTGTCAAATTAACT+TGG + Chr2:51883355-51883374 None:intergenic 25.0%
! ACAATTACTTTATCCAACTT+GGG - Chr2:51881671-51881690 MsG0280009434.01.T01:intron 25.0%
! ACACATGTGAAATTTGAAAA+AGG - Chr2:51880525-51880544 MsG0280009434.01.T01:intron 25.0%
! ACGAAAAAAAGTGATTGATA+AGG + Chr2:51879010-51879029 None:intergenic 25.0%
! ACTTAGACATCATATTTGTA+GGG - Chr2:51876037-51876056 MsG0280009434.01.T01:three_prime_UTR 25.0%
! AGAAAAAAAAACTTTGTTGG+TGG - Chr2:51877972-51877991 MsG0280009434.01.T01:intron 25.0%
! AGTTAGCTCAAATTAAAAGA+TGG - Chr2:51882097-51882116 MsG0280009434.01.T01:intron 25.0%
! ATAACAATAACAAGTTTCCT+GGG + Chr2:51883969-51883988 None:intergenic 25.0%
! ATAATATATTTAATTGCGCG+GGG + Chr2:51881762-51881781 None:intergenic 25.0%
! ATCATATACTATGTAAAAGG+CGG - Chr2:51881508-51881527 MsG0280009434.01.T01:CDS 25.0%
! ATGAATAAGGTTAGAAACAT+AGG + Chr2:51876547-51876566 None:intergenic 25.0%
! ATTTATTTGAGGGCAAATTT+GGG - Chr2:51880737-51880756 MsG0280009434.01.T01:CDS 25.0%
! ATTTGCCTATCAAAAACTAA+TGG + Chr2:51876179-51876198 None:intergenic 25.0%
! CACTAATAAATCTCAGAAAA+AGG - Chr2:51879480-51879499 MsG0280009434.01.T01:intron 25.0%
! CATAATGCTAATGGAATATA+GGG - Chr2:51880692-51880711 MsG0280009434.01.T01:CDS 25.0%
! CTAACTAACTGTTAACATTT+GGG + Chr2:51879710-51879729 None:intergenic 25.0%
! CTATTAGATTAACTTTGTGT+AGG + Chr2:51882591-51882610 None:intergenic 25.0%
! GATATTATTAGTATGTTAGC+AGG - Chr2:51883013-51883032 MsG0280009434.01.T01:intron 25.0%
! GATCTATGTACATTATATTG+GGG - Chr2:51877338-51877357 MsG0280009434.01.T01:intron 25.0%
! GGATCTATGTACATTATATT+GGG - Chr2:51877337-51877356 MsG0280009434.01.T01:intron 25.0%
! GTCTGTAAATTGGTTATATT+TGG + Chr2:51881413-51881432 None:intergenic 25.0%
! TAAATTTCTTGCAAGAGAAA+AGG - Chr2:51877027-51877046 MsG0280009434.01.T01:intron 25.0%
! TAATTAAGATGACAGAGAAA+AGG + Chr2:51877829-51877848 None:intergenic 25.0%
! TACATAGTATATGATCTTTC+CGG + Chr2:51881503-51881522 None:intergenic 25.0%
! TATAACAATAACAAGTTTCC+TGG + Chr2:51883970-51883989 None:intergenic 25.0%
! TATAAGTGCATATGTATTGT+CGG + Chr2:51883476-51883495 None:intergenic 25.0%
! TATGTGACATGTGAAAAATT+CGG - Chr2:51879811-51879830 MsG0280009434.01.T01:intron 25.0%
! TATTTATTTGAGGGCAAATT+TGG - Chr2:51880736-51880755 MsG0280009434.01.T01:CDS 25.0%
! TCATAATGCTAATGGAATAT+AGG - Chr2:51880691-51880710 MsG0280009434.01.T01:CDS 25.0%
! TCTAACTAACTGTTAACATT+TGG + Chr2:51879711-51879730 None:intergenic 25.0%
! TGAAAAAGGTCTTTCATTAA+GGG - Chr2:51880539-51880558 MsG0280009434.01.T01:intron 25.0%
! TGACAGAGAAAAGTAAAAAA+AGG - Chr2:51878489-51878508 MsG0280009434.01.T01:CDS 25.0%
! TGCACGTATTATTTATTTGA+GGG - Chr2:51880727-51880746 MsG0280009434.01.T01:CDS 25.0%
! TGTGATAGTTACATTTACAA+TGG - Chr2:51877466-51877485 MsG0280009434.01.T01:intron 25.0%
! TTCAAGATCAATTACAGATT+TGG + Chr2:51876142-51876161 None:intergenic 25.0%
! TTCATCATTGTGTTAACATT+AGG + Chr2:51879061-51879080 None:intergenic 25.0%
! TTGAAAAAGGTCTTTCATTA+AGG - Chr2:51880538-51880557 MsG0280009434.01.T01:intron 25.0%
! TTGAAAGAACAAAGAAAATG+AGG - Chr2:51877919-51877938 MsG0280009434.01.T01:intron 25.0%
! TTGCACGTATTATTTATTTG+AGG - Chr2:51880726-51880745 MsG0280009434.01.T01:CDS 25.0%
! TTGTGAATGTGATATGAATA+TGG - Chr2:51883371-51883390 MsG0280009434.01.T01:CDS 25.0%
! TTGTTTACATTTACTGGAAA+TGG - Chr2:51876979-51876998 MsG0280009434.01.T01:intron 25.0%
!! AAACTTTAGAAACACTAGTT+AGG + Chr2:51882041-51882060 None:intergenic 25.0%
!! AAGTTGAGTGTTATTGTAAA+AGG - Chr2:51883580-51883599 MsG0280009434.01.T01:intron 25.0%
!! ACATTTCTAAACCTTTAAAG+AGG + Chr2:51883857-51883876 None:intergenic 25.0%
!! ATAAAAGAGCATAACTTTCT+TGG - Chr2:51877682-51877701 MsG0280009434.01.T01:intron 25.0%
!! ATTACCCTATTTCTTGAAAA+TGG - Chr2:51877845-51877864 MsG0280009434.01.T01:intron 25.0%
!! ATTTTTCCAGAGAAATACAT+GGG + Chr2:51879200-51879219 None:intergenic 25.0%
!! CATATATAGAAGGGAAATTT+TGG + Chr2:51879581-51879600 None:intergenic 25.0%
!! GCATTTTATTGTTTCAATGT+AGG + Chr2:51880777-51880796 None:intergenic 25.0%
!! GTTACTCTTGATTTTTATCT+GGG + Chr2:51876296-51876315 None:intergenic 25.0%
!! TACAGCAATAGAGAAATTTT+AGG - Chr2:51881875-51881894 MsG0280009434.01.T01:intron 25.0%
!! TTTTTATATGTTTCCAGCTA+GGG + Chr2:51881363-51881382 None:intergenic 25.0%
!!! ACTTAGACATCATAGTTTTT+TGG - Chr2:51875952-51875971 MsG0280009434.01.T01:three_prime_UTR 25.0%
!!! ATCATCCATTTTCAAGAAAT+AGG + Chr2:51877853-51877872 None:intergenic 25.0%
!!! CTATTTTTCTTTTCTAGTGA+TGG - Chr2:51876913-51876932 MsG0280009434.01.T01:intron 25.0%
!!! GTGTTGCTATTTATTACTAA+AGG + Chr2:51878765-51878784 None:intergenic 25.0%
!!! TAAAGAAATTTTAACGCAAC+AGG + Chr2:51879375-51879394 None:intergenic 25.0%
!!! TCATCCATTTTCAAGAAATA+GGG + Chr2:51877852-51877871 None:intergenic 25.0%
!!! TTCTTCTTTCTATTTTTTGG+AGG + Chr2:51877894-51877913 None:intergenic 25.0%
!!! TTTTCTTTGAAGAAGATTGT+CGG + Chr2:51882623-51882642 None:intergenic 25.0%
!!! TTTTTTATATGTTTCCAGCT+AGG + Chr2:51881364-51881383 None:intergenic 25.0%
AAAGAAAGAATAACGGTGAT+TGG + Chr2:51880172-51880191 None:intergenic 30.0%
AAGATTGTTTCAGTTGTTTG+CGG - Chr2:51879442-51879461 MsG0280009434.01.T01:intron 30.0%
AAGCTATCAACAAGTATATC+AGG - Chr2:51876392-51876411 MsG0280009434.01.T01:intron 30.0%
AAGGCTAGAAAAGTTAAAAG+AGG + Chr2:51877810-51877829 None:intergenic 30.0%
AATCACCGTTATTCTTTCTT+TGG - Chr2:51880171-51880190 MsG0280009434.01.T01:intron 30.0%
ACAAACAAATTAAGTGAGTG+GGG + Chr2:51877371-51877390 None:intergenic 30.0%
ACACCTTAGTGCATTTAAAT+TGG + Chr2:51884131-51884150 None:intergenic 30.0%
ACAGTCAATCTAGAAAAGTT+TGG + Chr2:51876463-51876482 None:intergenic 30.0%
ACCTTCCAAAGAAAGAATAA+CGG + Chr2:51880179-51880198 None:intergenic 30.0%
AGAAATGTATGATTGTTGCA+GGG - Chr2:51883869-51883888 MsG0280009434.01.T01:intron 30.0%
AGAATAGGAAGAAATGATGA+AGG - Chr2:51880865-51880884 MsG0280009434.01.T01:intron 30.0%
AGACTTATCATTGACAATCA+AGG - Chr2:51881304-51881323 MsG0280009434.01.T01:intron 30.0%
AGCTATCAACAAGTATATCA+GGG - Chr2:51876393-51876412 MsG0280009434.01.T01:intron 30.0%
AGGCTAGAAAAGTTAAAAGA+GGG + Chr2:51877809-51877828 None:intergenic 30.0%
AGTAACATAATTCGTGCAAA+AGG + Chr2:51880300-51880319 None:intergenic 30.0%
AGTATTCACATCTGAACTAA+TGG + Chr2:51881551-51881570 None:intergenic 30.0%
ATAAGTGCATATGTATTGTC+GGG + Chr2:51883475-51883494 None:intergenic 30.0%
ATCAAAACATCAAAGTTGAC+AGG - Chr2:51879911-51879930 MsG0280009434.01.T01:intron 30.0%
ATCCAGAAATTTCAATTGGT+GGG + Chr2:51878660-51878679 None:intergenic 30.0%
ATGTAGACACAGTTAAGAAA+TGG + Chr2:51876114-51876133 None:intergenic 30.0%
ATTGGCAAGACAATATTCTT+AGG + Chr2:51882891-51882910 None:intergenic 30.0%
CAACAAACAAATTAAGTGAG+TGG + Chr2:51877373-51877392 None:intergenic 30.0%
CAATTACTTTATCCAACTTG+GGG - Chr2:51881672-51881691 MsG0280009434.01.T01:intron 30.0%
CAATTCTTAAAGATCAAAGG+AGG + Chr2:51876088-51876107 None:intergenic 30.0%
CATACTAATAATATCAACGG+TGG + Chr2:51883008-51883027 None:intergenic 30.0%
CATCCAATTTAAATGCACTA+AGG - Chr2:51884125-51884144 MsG0280009434.01.T01:CDS 30.0%
CGGATCTATGTACATTATAT+TGG - Chr2:51877336-51877355 MsG0280009434.01.T01:intron 30.0%
CTGGAATACAATGATGAATA+AGG + Chr2:51876560-51876579 None:intergenic 30.0%
CTTATGGTGTCTATAATAGA+AGG + Chr2:51883434-51883453 None:intergenic 30.0%
CTTCTATTATAGACACCATA+AGG - Chr2:51883432-51883451 MsG0280009434.01.T01:intron 30.0%
GAAAAAGGTCTTTCATTAAG+GGG - Chr2:51880540-51880559 MsG0280009434.01.T01:intron 30.0%
GAATAGGAAGAAATGATGAA+GGG - Chr2:51880866-51880885 MsG0280009434.01.T01:intron 30.0%
GACAATATTCTTAGGAATGA+TGG + Chr2:51882883-51882902 None:intergenic 30.0%
GACTTAGACATCATATTTGT+AGG - Chr2:51876036-51876055 MsG0280009434.01.T01:three_prime_UTR 30.0%
GAGGACAGTATATAAAGAAA+AGG + Chr2:51879558-51879577 None:intergenic 30.0%
GAGTTCCATTGTATCATTAT+TGG - Chr2:51880965-51880984 MsG0280009434.01.T01:intron 30.0%
GTTCTTCTCATATACTCTAT+TGG - Chr2:51876849-51876868 MsG0280009434.01.T01:intron 30.0%
TACTACAAAACTGACTAGTA+AGG + Chr2:51882326-51882345 None:intergenic 30.0%
TAGAAATGTATGATTGTTGC+AGG - Chr2:51883868-51883887 MsG0280009434.01.T01:intron 30.0%
TAGTCTCTCAATACAAAAAC+TGG + Chr2:51876579-51876598 None:intergenic 30.0%
TATCACATTCATACTGATCA+GGG - Chr2:51881003-51881022 MsG0280009434.01.T01:intron 30.0%
TATGATGTCTAAGTCCAATT+AGG + Chr2:51875946-51875965 None:intergenic 30.0%
TCAATGTATAGATAGTTGAC+AGG - Chr2:51878921-51878940 MsG0280009434.01.T01:intron 30.0%
TCAGCACTTCAATGATAAAT+TGG + Chr2:51882909-51882928 None:intergenic 30.0%
TCATATACTATGTAAAAGGC+GGG - Chr2:51881509-51881528 MsG0280009434.01.T01:CDS 30.0%
TCATTCAGTAACATCTTGTA+TGG - Chr2:51876804-51876823 MsG0280009434.01.T01:intron 30.0%
TCTCTTAAATCTTCCAATGT+GGG + Chr2:51879987-51880006 None:intergenic 30.0%
TGAAAAATTCGGTACGTATA+GGG - Chr2:51879822-51879841 MsG0280009434.01.T01:intron 30.0%
TGATTATATATCGCTTCATG+TGG - Chr2:51883636-51883655 MsG0280009434.01.T01:intron 30.0%
TGGAAATGGTGAAAATGATA+GGG - Chr2:51876993-51877012 MsG0280009434.01.T01:intron 30.0%
TGTAATAAGTGTAGATCACT+TGG + Chr2:51881285-51881304 None:intergenic 30.0%
TGTATCAAGTGTTAGATAGT+TGG - Chr2:51879684-51879703 MsG0280009434.01.T01:intron 30.0%
TGTCTATAAAACCAAGCAAA+TGG - Chr2:51880022-51880041 MsG0280009434.01.T01:intron 30.0%
TGTTACCAATCTCATAGAAA+CGG + Chr2:51881072-51881091 None:intergenic 30.0%
TGTTTATCACTATCTGATGT+TGG + Chr2:51881711-51881730 None:intergenic 30.0%
TTAAACCTCAAAACATGACA+AGG + Chr2:51876003-51876022 None:intergenic 30.0%
TTAGAGATTTGTGGAGATTT+CGG - Chr2:51878327-51878346 MsG0280009434.01.T01:CDS 30.0%
TTCACTGAAACTTATTAACC+AGG + Chr2:51882747-51882766 None:intergenic 30.0%
TTCCATTAGCATTATGACAA+TGG + Chr2:51880688-51880707 None:intergenic 30.0%
TTCCATTGTATCATTATTGG+TGG - Chr2:51880968-51880987 MsG0280009434.01.T01:intron 30.0%
TTCTCTTAAATCTTCCAATG+TGG + Chr2:51879988-51880007 None:intergenic 30.0%
TTGACATAAATAAGAATCGG+AGG - Chr2:51880894-51880913 MsG0280009434.01.T01:intron 30.0%
TTTCCCTTCTATATATGCAT+TGG - Chr2:51879584-51879603 MsG0280009434.01.T01:intron 30.0%
TTTGATCAGTTAGAGATTTG+TGG - Chr2:51878318-51878337 MsG0280009434.01.T01:CDS 30.0%
! AAACTCTTTCTTCCTTTTTG+CGG - Chr2:51877227-51877246 MsG0280009434.01.T01:intron 30.0%
! AAATGAGTTTTCGACATACA+TGG + Chr2:51881832-51881851 None:intergenic 30.0%
! ACAACAATTTTCAGTCAATC+AGG + Chr2:51883056-51883075 None:intergenic 30.0%
! ATAATGTGTCAAGCCTTATA+AGG + Chr2:51878718-51878737 None:intergenic 30.0%
! ATATCTTTGGTTGATATGGA+CGG + Chr2:51878683-51878702 None:intergenic 30.0%
! ATTGAGGCAAACTTTTATAG+AGG - Chr2:51876942-51876961 MsG0280009434.01.T01:intron 30.0%
! CAAAGTGGGTCTTATAATAA+GGG - Chr2:51880603-51880622 MsG0280009434.01.T01:intron 30.0%
! CACATAATTTGCATTTGTGT+TGG - Chr2:51879768-51879787 MsG0280009434.01.T01:intron 30.0%
! CATCTTTGAAAGATTCTGTA+TGG + Chr2:51882690-51882709 None:intergenic 30.0%
! CGTTACTCTTGATTTTTATC+TGG + Chr2:51876297-51876316 None:intergenic 30.0%
! CTTTTTCTGCTGTCATTAAT+CGG - Chr2:51879312-51879331 MsG0280009434.01.T01:intron 30.0%
! GAACCATAATTTTCAGAGTA+CGG - Chr2:51883925-51883944 MsG0280009434.01.T01:intron 30.0%
! GATTTTTCCAGAGAAATACA+TGG + Chr2:51879201-51879220 None:intergenic 30.0%
! TCAAAGTGGGTCTTATAATA+AGG - Chr2:51880602-51880621 MsG0280009434.01.T01:intron 30.0%
! TGAGTGGGTCTTATAAATAA+CGG + Chr2:51880442-51880461 None:intergenic 30.0%
! TTGCCTTACAAATCAGTTTT+GGG - Chr2:51882070-51882089 MsG0280009434.01.T01:intron 30.0%
! TTTTATATGTTTCCAGCTAG+GGG + Chr2:51881362-51881381 None:intergenic 30.0%
!! AATTAGCAAGTACCGAATTT+GGG + Chr2:51880261-51880280 None:intergenic 30.0%
!! AGAAATTTTAGGTCTGACAT+AGG - Chr2:51881886-51881905 MsG0280009434.01.T01:intron 30.0%
!! AGATAATTCTCAGAAGCATT+AGG - Chr2:51882830-51882849 MsG0280009434.01.T01:CDS 30.0%
!! ATTGAAGAAGTATTATTGGC+TGG - Chr2:51882492-51882511 MsG0280009434.01.T01:intron 30.0%
!! GTGTGGATCATTTTTAACAT+TGG + Chr2:51879871-51879890 None:intergenic 30.0%
!! TCTTATGCTTTTTGTGTTAC+AGG - Chr2:51883672-51883691 MsG0280009434.01.T01:intron 30.0%
!! TTGAAGAAGTATTATTGGCT+GGG - Chr2:51882493-51882512 MsG0280009434.01.T01:intron 30.0%
!!! CTAGTGATGGTTTTAAATTG+AGG - Chr2:51876926-51876945 MsG0280009434.01.T01:intron 30.0%
!!! CTTTTTTTCTTTTGGATGTG+TGG + Chr2:51879888-51879907 None:intergenic 30.0%
!!! TTCCTCCATTAGTTTTTGAT+AGG - Chr2:51876171-51876190 MsG0280009434.01.T01:CDS 30.0%
AAACTCTTTCATTGAGATGG+AGG - Chr2:51876607-51876626 MsG0280009434.01.T01:intron 35.0%
AAAGCTGTTGAATGAGAGAA+AGG - Chr2:51879955-51879974 MsG0280009434.01.T01:intron 35.0%
AAATCCATCAGCAGAAAATC+CGG - Chr2:51881598-51881617 MsG0280009434.01.T01:CDS 35.0%
AAGACCCACTCACAAAATTA+CGG - Chr2:51880450-51880469 MsG0280009434.01.T01:intron 35.0%
AAGCAACTCTAAATCTCTCT+CGG - Chr2:51881135-51881154 MsG0280009434.01.T01:intron 35.0%
AAGCACTTATAGCTTGAAAC+TGG + Chr2:51879295-51879314 None:intergenic 35.0%
AAGTGATTGATAAGGCAACA+AGG + Chr2:51879002-51879021 None:intergenic 35.0%
AATGTACATAGATCCGTGTA+TGG + Chr2:51877332-51877351 None:intergenic 35.0%
ACCGTTATTCTTTCTTTGGA+AGG - Chr2:51880175-51880194 MsG0280009434.01.T01:intron 35.0%
ACGGATCCAGAAATTTCAAT+TGG + Chr2:51878664-51878683 None:intergenic 35.0%
ACTGAATGAGATCAAGTCTA+TGG + Chr2:51876793-51876812 None:intergenic 35.0%
ACTTTCGTTATGGACTTGTA+CGG - Chr2:51877056-51877075 MsG0280009434.01.T01:intron 35.0%
AGATCCGTGTATGGATAATA+TGG + Chr2:51877323-51877342 None:intergenic 35.0%
AGCCATTGTCATAATGCTAA+TGG - Chr2:51880683-51880702 MsG0280009434.01.T01:CDS 35.0%
AGGATCATATAGTCCTTTGT+TGG + Chr2:51878096-51878115 None:intergenic 35.0%
AGTATTAGGAGTTATTGACC+AGG + Chr2:51876254-51876273 None:intergenic 35.0%
ATCATATAGTCCTTTGTTGG+TGG + Chr2:51878093-51878112 None:intergenic 35.0%
ATGAGAAGAACAACAAAGAG+TGG + Chr2:51876840-51876859 None:intergenic 35.0%
ATGGCCAATGCATATATAGA+AGG + Chr2:51879591-51879610 None:intergenic 35.0%
ATTTGGGTACTTCAGCATAT+TGG + Chr2:51880245-51880264 None:intergenic 35.0%
CAAACAAATTAAGTGAGTGG+GGG + Chr2:51877370-51877389 None:intergenic 35.0%
CAAACAATGAACAGCCAAAT+TGG - Chr2:51883806-51883825 MsG0280009434.01.T01:intron 35.0%
CAACAGGAAAGATGAGATAA+GGG + Chr2:51879359-51879378 None:intergenic 35.0%
CATAGGCTTAATCGAAAAGA+AGG + Chr2:51878042-51878061 None:intergenic 35.0%
CATATACTATGTAAAAGGCG+GGG - Chr2:51881510-51881529 MsG0280009434.01.T01:CDS 35.0%
CGAGGTAATATGTAGCTAAA+CGG + Chr2:51883174-51883193 None:intergenic 35.0%
CGTATCTTAAATCCGTTGTT+GGG - Chr2:51882128-51882147 MsG0280009434.01.T01:intron 35.0%
CGTTTAGCTACATATTACCT+CGG - Chr2:51883172-51883191 MsG0280009434.01.T01:CDS 35.0%
CTGGAAATGGTGAAAATGAT+AGG - Chr2:51876992-51877011 MsG0280009434.01.T01:intron 35.0%
CTTATTAAGGTTATGGCTGT+TGG - Chr2:51881460-51881479 MsG0280009434.01.T01:intron 35.0%
CTTCTCATATACTCTATTGG+TGG - Chr2:51876852-51876871 MsG0280009434.01.T01:intron 35.0%
CTTTACAAGTTCATCTGCAT+TGG - Chr2:51881192-51881211 MsG0280009434.01.T01:intron 35.0%
GAAAAATTCGGTACGTATAG+GGG - Chr2:51879823-51879842 MsG0280009434.01.T01:intron 35.0%
GAAGAACTTGAATGACATAG+CGG + Chr2:51879160-51879179 None:intergenic 35.0%
GAGAAACTCTTTCATTGAGA+TGG - Chr2:51876604-51876623 MsG0280009434.01.T01:intron 35.0%
GATCCAGAAATTTCAATTGG+TGG + Chr2:51878661-51878680 None:intergenic 35.0%
GATCCCATATTATCCATACA+CGG - Chr2:51877316-51877335 MsG0280009434.01.T01:intron 35.0%
GATCCGTGTATGGATAATAT+GGG + Chr2:51877322-51877341 None:intergenic 35.0%
GATGATCTAAGTTCTTTCAC+CGG - Chr2:51876729-51876748 MsG0280009434.01.T01:intron 35.0%
GATTGGATTCAACACATGAA+TGG - Chr2:51883199-51883218 MsG0280009434.01.T01:CDS 35.0%
GGAAATGGTGAAAATGATAG+GGG - Chr2:51876994-51877013 MsG0280009434.01.T01:intron 35.0%
GGCATAACATACATTAGTGT+TGG - Chr2:51883724-51883743 MsG0280009434.01.T01:intron 35.0%
GGGAGTAGTGTTATAAGAAT+AGG - Chr2:51880850-51880869 MsG0280009434.01.T01:intron 35.0%
GTATCACATTCATACTGATC+AGG - Chr2:51881002-51881021 MsG0280009434.01.T01:intron 35.0%
GTATTAGGAGTTATTGACCA+GGG + Chr2:51876253-51876272 None:intergenic 35.0%
GTCCATATCAACCAAAGATA+TGG - Chr2:51878682-51878701 MsG0280009434.01.T01:intron 35.0%
GTCTTCATGTACTCAGTATT+AGG + Chr2:51876268-51876287 None:intergenic 35.0%
GTGAAAAATTCGGTACGTAT+AGG - Chr2:51879821-51879840 MsG0280009434.01.T01:intron 35.0%
GTGATATATCTGAAGATCGT+GGG - Chr2:51881575-51881594 MsG0280009434.01.T01:CDS 35.0%
TAAATCTCTCTCGGATTCTT+TGG - Chr2:51881144-51881163 MsG0280009434.01.T01:intron 35.0%
TAAGTGCATATGTATTGTCG+GGG + Chr2:51883474-51883493 None:intergenic 35.0%
TACAGTTATCGGACAATAGA+GGG - Chr2:51882435-51882454 MsG0280009434.01.T01:intron 35.0%
TACTGTATTTGATTCCTGAC+AGG - Chr2:51882794-51882813 MsG0280009434.01.T01:intron 35.0%
TAGACGTGAATCCTCTTTAA+AGG - Chr2:51883843-51883862 MsG0280009434.01.T01:intron 35.0%
TAGACTATTACTTTACCTGG+AGG + Chr2:51876896-51876915 None:intergenic 35.0%
TCAGCAATTGCTGTAAAGAA+AGG + Chr2:51879100-51879119 None:intergenic 35.0%
TCATCTGAGTTTGACAAGAA+AGG + Chr2:51883091-51883110 None:intergenic 35.0%
TCATCTGCATTGGAATCTAA+TGG - Chr2:51881202-51881221 MsG0280009434.01.T01:intron 35.0%
TCCAGAAATTTCAATTGGTG+GGG + Chr2:51878659-51878678 None:intergenic 35.0%
TGAGAATAGTCCAAGCTTTA+TGG + Chr2:51882303-51882322 None:intergenic 35.0%
TGCCTATCAAAAACTAATGG+AGG + Chr2:51876176-51876195 None:intergenic 35.0%
TGGCCAATGCATATATAGAA+GGG + Chr2:51879590-51879609 None:intergenic 35.0%
TGGCTGTTCATTGTTTGAAT+CGG + Chr2:51883803-51883822 None:intergenic 35.0%
TGGTACTGTTGTCTGTAAAT+TGG + Chr2:51881423-51881442 None:intergenic 35.0%
TTACAGTTATCGGACAATAG+AGG - Chr2:51882434-51882453 MsG0280009434.01.T01:intron 35.0%
TTAGATCATCAACAATTCGC+TGG + Chr2:51876719-51876738 None:intergenic 35.0%
TTAGTCCGTTTCTATGAGAT+TGG - Chr2:51881064-51881083 MsG0280009434.01.T01:intron 35.0%
TTGAGAACTGTATGGATTTG+AGG - Chr2:51880046-51880065 MsG0280009434.01.T01:intron 35.0%
TTGAGGTAGGAAAAAGATTC+CGG + Chr2:51881620-51881639 None:intergenic 35.0%
TTTATATGTTTCCAGCTAGG+GGG + Chr2:51881361-51881380 None:intergenic 35.0%
TTTCTCTATTGCTGTAGTCT+CGG + Chr2:51881871-51881890 None:intergenic 35.0%
TTTGGGTACTTCAGCATATT+GGG + Chr2:51880244-51880263 None:intergenic 35.0%
! AACTCTTTCTTCCTTTTTGC+GGG - Chr2:51877228-51877247 MsG0280009434.01.T01:intron 35.0%
! AAGCAGCTACTTTACTACTT+GGG - Chr2:51875811-51875830 MsG0280009434.01.T01:three_prime_UTR 35.0%
! AAGCCTTATAAGGACTACTT+TGG + Chr2:51878708-51878727 None:intergenic 35.0%
! AAGTTGTTTCATGTCTCTTG+TGG + Chr2:51881235-51881254 None:intergenic 35.0%
! AGTATCCGTAATTTTGTGAG+TGG + Chr2:51880458-51880477 None:intergenic 35.0%
! CAAATTCGGTACTTGCTAAT+TGG - Chr2:51880260-51880279 MsG0280009434.01.T01:intron 35.0%
! CATCCGTACTCTGAAAATTA+TGG + Chr2:51883931-51883950 None:intergenic 35.0%
! CTCTTCTATGAGTGTTTCTA+TGG + Chr2:51884016-51884035 None:intergenic 35.0%
! CTTGCCTTACAAATCAGTTT+TGG - Chr2:51882069-51882088 MsG0280009434.01.T01:intron 35.0%
! CTTTCAAGTCTCAAATTCTC+AGG + Chr2:51880946-51880965 None:intergenic 35.0%
! GAGAATAGTCCAAGCTTTAT+GGG + Chr2:51882302-51882321 None:intergenic 35.0%
! GCTGATTTCTTCTAGAAATC+TGG - Chr2:51879115-51879134 MsG0280009434.01.T01:intron 35.0%
! GTATCCGTAATTTTGTGAGT+GGG + Chr2:51880457-51880476 None:intergenic 35.0%
! GTGGGAGTTTTTACAGTTAT+CGG - Chr2:51882424-51882443 MsG0280009434.01.T01:intron 35.0%
! TAGTATTTTCTCCTTCGCTA+GGG - Chr2:51876221-51876240 MsG0280009434.01.T01:CDS 35.0%
! TATAGAAGGGAAATTTTGGG+AGG + Chr2:51879577-51879596 None:intergenic 35.0%
! TATGCTGAAGTACCCAAATT+CGG - Chr2:51880246-51880265 MsG0280009434.01.T01:intron 35.0%
! TATTCTTTCTTTGGAAGGTG+TGG - Chr2:51880180-51880199 MsG0280009434.01.T01:intron 35.0%
! TCTTTTCGATTAAGCCTATG+TGG - Chr2:51878042-51878061 MsG0280009434.01.T01:intron 35.0%
! TGCCTTACAAATCAGTTTTG+GGG - Chr2:51882071-51882090 MsG0280009434.01.T01:intron 35.0%
! TGGGTCTTATAAATAACGGA+CGG + Chr2:51880438-51880457 None:intergenic 35.0%
! TTAGTATTTTCTCCTTCGCT+AGG - Chr2:51876220-51876239 MsG0280009434.01.T01:CDS 35.0%
! TTCTCTGGAAAAATCGAGTT+TGG - Chr2:51879206-51879225 MsG0280009434.01.T01:intron 35.0%
! TTTATCAGCTCGTCTGTTTT+TGG + Chr2:51883136-51883155 None:intergenic 35.0%
!! AACCCCAAAACTGATTTGTA+AGG + Chr2:51882076-51882095 None:intergenic 35.0%
!! AGGCGAGTTTGATGATATTT+TGG - Chr2:51881108-51881127 MsG0280009434.01.T01:intron 35.0%
!! CAAAACTGATTTGTAAGGCA+AGG + Chr2:51882071-51882090 None:intergenic 35.0%
!! CAAATGGATTGAGAACTGTA+TGG - Chr2:51880038-51880057 MsG0280009434.01.T01:intron 35.0%
!! CAATTAGCAAGTACCGAATT+TGG + Chr2:51880262-51880281 None:intergenic 35.0%
!! CTTTAAGATATGTGCACATG+TGG - Chr2:51879390-51879409 MsG0280009434.01.T01:intron 35.0%
!! TAGGTTAAGGTGTTTTCTCA+AGG - Chr2:51880390-51880409 MsG0280009434.01.T01:intron 35.0%
!! TCTGCTTTTAATCACATCCT+TGG - Chr2:51879248-51879267 MsG0280009434.01.T01:intron 35.0%
!! TTGATTTGTTTGTTCCTGTC+AGG + Chr2:51882811-51882830 None:intergenic 35.0%
!! TTGTTGGTGGTGTTAGTTAT+GGG - Chr2:51877985-51878004 MsG0280009434.01.T01:intron 35.0%
!! TTTGTTGGTGGTGTTAGTTA+TGG - Chr2:51877984-51878003 MsG0280009434.01.T01:intron 35.0%
!!! TGAATGCCTCTGCTATTTTT+AGG - Chr2:51876495-51876514 MsG0280009434.01.T01:intron 35.0%
AAAGAGGATTCACGTCTAGT+GGG + Chr2:51883841-51883860 None:intergenic 40.0%
AACAGCCCTTTCTTTCTCTT+TGG - Chr2:51876752-51876771 MsG0280009434.01.T01:intron 40.0%
AAGGAAGCAGACTTTCGTTA+TGG - Chr2:51877046-51877065 MsG0280009434.01.T01:intron 40.0%
AAGGTTAGAAACATAGGCAG+AGG + Chr2:51876541-51876560 None:intergenic 40.0%
AATCGGTTGTAGATATGCGT+AGG + Chr2:51883786-51883805 None:intergenic 40.0%
AATGACATAGCGGTAACCAT+TGG + Chr2:51879150-51879169 None:intergenic 40.0%
AGAAGAACAACAAAGAGTGG+AGG + Chr2:51876837-51876856 None:intergenic 40.0%
AGAATCATCACAGTCCACAT+AGG + Chr2:51878059-51878078 None:intergenic 40.0%
AGCTACATATTACCTCGGTT+CGG - Chr2:51883177-51883196 MsG0280009434.01.T01:CDS 40.0%
AGTCACATCGCATAGAGATA+TGG - Chr2:51882015-51882034 MsG0280009434.01.T01:intron 40.0%
ATATGCGTAGGATTCTGTCA+TGG + Chr2:51883774-51883793 None:intergenic 40.0%
ATGATGCAATCTTGTCTCCT+AGG + Chr2:51879636-51879655 None:intergenic 40.0%
ATTGAGAACACCACCAACAA+AGG - Chr2:51878080-51878099 MsG0280009434.01.T01:intron 40.0%
CAATGAGAGAAAAGTCACCA+AGG + Chr2:51879268-51879287 None:intergenic 40.0%
CAGTTCTCAATCCATTTGCT+TGG + Chr2:51880036-51880055 None:intergenic 40.0%
CCAGAAATTTCAATTGGTGG+GGG + Chr2:51878658-51878677 None:intergenic 40.0%
CGACAACCTAAAAATAGCAG+AGG + Chr2:51876504-51876523 None:intergenic 40.0%
CGAGCTGATAAAGATCTTAG+AGG - Chr2:51883144-51883163 MsG0280009434.01.T01:intron 40.0%
CGATCTTCAGATATATCACG+AGG + Chr2:51881574-51881593 None:intergenic 40.0%
CGTGACAAAGATCATGGTAA+GGG - Chr2:51878274-51878293 MsG0280009434.01.T01:intron 40.0%
CGTGATATATCTGAAGATCG+TGG - Chr2:51881574-51881593 MsG0280009434.01.T01:CDS 40.0%
CTTTCGTTATGGACTTGTAC+GGG - Chr2:51877057-51877076 MsG0280009434.01.T01:intron 40.0%
GACTACTTTGGCCATATCTT+TGG + Chr2:51878696-51878715 None:intergenic 40.0%
GAGTCAATTGCTTTCTATGG+TGG - Chr2:51877094-51877113 MsG0280009434.01.T01:intron 40.0%
GAGTGCCAAAGAGAAAGAAA+GGG + Chr2:51876760-51876779 None:intergenic 40.0%
GCAACAGGAAAGATGAGATA+AGG + Chr2:51879360-51879379 None:intergenic 40.0%
GCACATTGCTGCACTTTATT+AGG - Chr2:51875860-51875879 MsG0280009434.01.T01:three_prime_UTR 40.0%
GCGTATCTTAAATCCGTTGT+TGG - Chr2:51882127-51882146 MsG0280009434.01.T01:intron 40.0%
GCTGAGTCAATTGCTTTCTA+TGG - Chr2:51877091-51877110 MsG0280009434.01.T01:intron 40.0%
GGAGTTCAAGAATACCTCAT+TGG + Chr2:51883334-51883353 None:intergenic 40.0%
GGCCACCAATAATGATACAA+TGG + Chr2:51880973-51880992 None:intergenic 40.0%
GTAACCCAAATGCCACATTA+AGG + Chr2:51881946-51881965 None:intergenic 40.0%
GTGACAAAGATCATGGTAAG+GGG - Chr2:51878275-51878294 MsG0280009434.01.T01:intron 40.0%
GTTACGGTGGTGATAGTAAT+TGG - Chr2:51878410-51878429 MsG0280009434.01.T01:CDS 40.0%
TAAAGAGGATTCACGTCTAG+TGG + Chr2:51883842-51883861 None:intergenic 40.0%
TAAGGCAACAAGGTGACATT+TGG + Chr2:51878992-51879011 None:intergenic 40.0%
TAAGTAGTGCCCATAAAGCT+TGG - Chr2:51882290-51882309 MsG0280009434.01.T01:intron 40.0%
TAAGTTGTGCAACTTTGCAC+AGG + Chr2:51877760-51877779 None:intergenic 40.0%
TATTTAATTGCGCGGGGAAA+AGG + Chr2:51881756-51881775 None:intergenic 40.0%
TCAAAAGCCGTACATGGTTT+GGG - Chr2:51881636-51881655 MsG0280009434.01.T01:intron 40.0%
TCCAACACCATCATTCTGTT+GGG - Chr2:51881979-51881998 MsG0280009434.01.T01:intron 40.0%
TCTGCTGTCATTAATCGGTT+AGG - Chr2:51879317-51879336 MsG0280009434.01.T01:intron 40.0%
TCTGTCATGGAAGTTGCATA+AGG + Chr2:51883761-51883780 None:intergenic 40.0%
TGAATGTGATACAGTACGAG+AGG + Chr2:51880994-51881013 None:intergenic 40.0%
TGGCCAAAGTAGTCCTTATA+AGG - Chr2:51878702-51878721 MsG0280009434.01.T01:intron 40.0%
TGTACTGTGTTTATCAGACC+TGG - Chr2:51882726-51882745 MsG0280009434.01.T01:intron 40.0%
TGTCATCATGTAGATTTCCC+AGG - Chr2:51883949-51883968 MsG0280009434.01.T01:intron 40.0%
TTACATGGATCGCTACTTGA+AGG - Chr2:51876647-51876666 MsG0280009434.01.T01:intron 40.0%
TTCTCTATTGCTGTAGTCTC+GGG + Chr2:51881870-51881889 None:intergenic 40.0%
TTCTTTGTGCTGGACTTGAA+GGG - Chr2:51877284-51877303 MsG0280009434.01.T01:intron 40.0%
TTTACAGACAACAGTACCAG+TGG - Chr2:51881424-51881443 MsG0280009434.01.T01:intron 40.0%
TTTCATTGAGATGGAGGTCT+TGG - Chr2:51876613-51876632 MsG0280009434.01.T01:intron 40.0%
! AAGATGTTTTGCACTTCCAC+TGG + Chr2:51881443-51881462 None:intergenic 40.0%
! AATCTGGAGTTCTTCACCAA+TGG - Chr2:51879131-51879150 MsG0280009434.01.T01:intron 40.0%
! ACTTGTGCTTGTGATGATGA+TGG - Chr2:51878442-51878461 MsG0280009434.01.T01:CDS 40.0%
! AGAGTGCCAAAGAGAAAGAA+AGG + Chr2:51876761-51876780 None:intergenic 40.0%
! AGTGGGTCTTATAATAAGGG+CGG - Chr2:51880606-51880625 MsG0280009434.01.T01:intron 40.0%
! CAAGCAGCTACTTTACTACT+TGG - Chr2:51875810-51875829 MsG0280009434.01.T01:three_prime_UTR 40.0%
! CGTGAACGTTTTCCATTTTG+TGG - Chr2:51878193-51878212 MsG0280009434.01.T01:intron 40.0%
! CTTCCTTTTTGCGGGTATTT+TGG - Chr2:51877236-51877255 MsG0280009434.01.T01:intron 40.0%
! GGCCATATCTTTGGTTGATA+TGG + Chr2:51878687-51878706 None:intergenic 40.0%
! GGTACTTGCTAATTGGTATG+CGG - Chr2:51880267-51880286 MsG0280009434.01.T01:intron 40.0%
! TCACACCTTGTCATGTTTTG+AGG - Chr2:51875995-51876014 MsG0280009434.01.T01:three_prime_UTR 40.0%
! TTGGATGACGAGGTATTACA+TGG - Chr2:51876632-51876651 MsG0280009434.01.T01:intron 40.0%
! TTTCCATTTTGTGGCAGAGA+CGG - Chr2:51878202-51878221 MsG0280009434.01.T01:intron 40.0%
! TTTCTTTGGAAGGTGTGGTT+CGG - Chr2:51880185-51880204 MsG0280009434.01.T01:intron 40.0%
! TTTGCATTTGTGTTGGTACG+CGG - Chr2:51879775-51879794 MsG0280009434.01.T01:intron 40.0%
!! AAAACCTCAACTAGCTCTAC+TGG - Chr2:51883281-51883300 MsG0280009434.01.T01:CDS 40.0%
!! AAGAGTACCCAAACCATGTA+CGG + Chr2:51881646-51881665 None:intergenic 40.0%
!! CATACATTAGTGTTGGCCAT+CGG - Chr2:51883731-51883750 MsG0280009434.01.T01:intron 40.0%
AACACACGACTGAAAACGTG+TGG + Chr2:51878130-51878149 None:intergenic 45.0%
AAGGTCAATAGGAGAGAGAC+AGG - Chr2:51878508-51878527 MsG0280009434.01.T01:CDS 45.0%
ACACAACTCAAATGCCGCAA+TGG + Chr2:51882226-51882245 None:intergenic 45.0%
ACACACGACTGAAAACGTGT+GGG + Chr2:51878129-51878148 None:intergenic 45.0%
ACCCAAATGCCACATTAAGG+CGG + Chr2:51881943-51881962 None:intergenic 45.0%
AGAAAGGCTAAGTCCCACAT+TGG - Chr2:51879971-51879990 MsG0280009434.01.T01:intron 45.0%
AGAATCGGAGGAAGAGAACT+AGG - Chr2:51880906-51880925 MsG0280009434.01.T01:intron 45.0%
AGAGAAAGAAAGGGCTGTTC+CGG + Chr2:51876751-51876770 None:intergenic 45.0%
AGATGCAACTTCTTCTGCAG+CGG - Chr2:51877128-51877147 MsG0280009434.01.T01:intron 45.0%
AGTTGCATAAGGTTGACCGA+TGG + Chr2:51883750-51883769 None:intergenic 45.0%
ATAGGCAGAGGCTTGGAATA+AGG + Chr2:51876529-51876548 None:intergenic 45.0%
ATCATTCTGTTGGGTGTGTG+GGG - Chr2:51881988-51882007 MsG0280009434.01.T01:intron 45.0%
ATGGAAGTTCCGCCTTAATG+TGG - Chr2:51881931-51881950 MsG0280009434.01.T01:intron 45.0%
ATGGTCTAGTGTTCTCTCTC+TGG - Chr2:51883218-51883237 MsG0280009434.01.T01:CDS 45.0%
ATGGTGAAAATGATAGGGGC+TGG - Chr2:51876998-51877017 MsG0280009434.01.T01:intron 45.0%
ATTTCCATTAGACGCCGATG+CGG - Chr2:51878159-51878178 MsG0280009434.01.T01:intron 45.0%
CAATGCAGGAAACCCAACAA+CGG + Chr2:51882143-51882162 None:intergenic 45.0%
CAGCCAAAATACCCGCAAAA+AGG + Chr2:51877242-51877261 None:intergenic 45.0%
CATAGGAGATGAGATGCTCA+AGG - Chr2:51881903-51881922 MsG0280009434.01.T01:intron 45.0%
CATCATTCTGTTGGGTGTGT+GGG - Chr2:51881987-51882006 MsG0280009434.01.T01:intron 45.0%
CCCCCACCAATTGAAATTTC+TGG - Chr2:51878655-51878674 MsG0280009434.01.T01:intron 45.0%
CGTATAGGGGTAAAGAGCTT+CGG - Chr2:51879836-51879855 MsG0280009434.01.T01:intron 45.0%
CTCAAAAGCCGTACATGGTT+TGG - Chr2:51881635-51881654 MsG0280009434.01.T01:intron 45.0%
CTCCAACACCATCATTCTGT+TGG - Chr2:51881978-51881997 MsG0280009434.01.T01:intron 45.0%
CTTCAAGTCCAGCACAAAGA+AGG + Chr2:51877285-51877304 None:intergenic 45.0%
CTTCTTTGTGCTGGACTTGA+AGG - Chr2:51877283-51877302 MsG0280009434.01.T01:intron 45.0%
GCGGACATAGTCAAATTCCT+AGG - Chr2:51879616-51879635 MsG0280009434.01.T01:intron 45.0%
GCGTGACAAAGATCATGGTA+AGG - Chr2:51878273-51878292 MsG0280009434.01.T01:intron 45.0%
GGATGCAGCGATGATTGTTA+CGG - Chr2:51878394-51878413 MsG0280009434.01.T01:CDS 45.0%
GTACGAAAAGATTGCAGCAG+CGG - Chr2:51883702-51883721 MsG0280009434.01.T01:intron 45.0%
GTCATCTGATGCAGCCTAAT+TGG - Chr2:51875929-51875948 MsG0280009434.01.T01:three_prime_UTR 45.0%
GTTATGGACTTGTACGGGTT+CGG - Chr2:51877062-51877081 MsG0280009434.01.T01:intron 45.0%
GTTGCTCCCATGTATTTCTC+TGG - Chr2:51879191-51879210 MsG0280009434.01.T01:intron 45.0%
TAAGCTGTGCAAAGTTGCAC+AGG - Chr2:51878554-51878573 MsG0280009434.01.T01:intron 45.0%
TACGAAAAGATTGCAGCAGC+GGG - Chr2:51883703-51883722 MsG0280009434.01.T01:intron 45.0%
TAGAAACATAGGCAGAGGCT+TGG + Chr2:51876536-51876555 None:intergenic 45.0%
TATCAACGGTGGTATCAGTC+AGG + Chr2:51882997-51883016 None:intergenic 45.0%
TCATCAACAATTCGCTGGTC+TGG + Chr2:51876714-51876733 None:intergenic 45.0%
TCATCCAGTAGAGCTAGTTG+AGG + Chr2:51883288-51883307 None:intergenic 45.0%
TCCGCCTTAATGTGGCATTT+GGG - Chr2:51881939-51881958 MsG0280009434.01.T01:intron 45.0%
TCTTTGTGCTGGACTTGAAG+GGG - Chr2:51877285-51877304 MsG0280009434.01.T01:intron 45.0%
TGGTCTAGTGTTCTCTCTCT+GGG - Chr2:51883219-51883238 MsG0280009434.01.T01:CDS 45.0%
TGTTGGAAGTTCCGCCTTAA+TGG - Chr2:51882193-51882212 MsG0280009434.01.T01:intron 45.0%
TTATGGACTTGTACGGGTTC+GGG - Chr2:51877063-51877082 MsG0280009434.01.T01:intron 45.0%
TTCCGCCTTAATGTGGCATT+TGG - Chr2:51881938-51881957 MsG0280009434.01.T01:intron 45.0%
TTGACTATGTCCGCACGTAA+TGG + Chr2:51879610-51879629 None:intergenic 45.0%
TTTGTGGAGATTTCGGTTGC+CGG - Chr2:51878334-51878353 MsG0280009434.01.T01:CDS 45.0%
! ACCCAACAGAATGATGGTGT+TGG + Chr2:51881983-51882002 None:intergenic 45.0%
! AGCTATCAGTGTTTTCCTCC+AGG - Chr2:51876878-51876897 MsG0280009434.01.T01:intron 45.0%
! AGGTTATGGCTGTTGGTCTA+TGG - Chr2:51881467-51881486 MsG0280009434.01.T01:intron 45.0%
! CAAACCATGTACGGCTTTTG+AGG + Chr2:51881637-51881656 None:intergenic 45.0%
! CAACAGAATGATGGTGTTGG+AGG + Chr2:51881980-51881999 None:intergenic 45.0%
! CAGCTACTTTACTACTTGGG+TGG - Chr2:51875814-51875833 MsG0280009434.01.T01:three_prime_UTR 45.0%
! GATTCCGGATTTTCTGCTGA+TGG + Chr2:51881605-51881624 None:intergenic 45.0%
! TATGCATTGGCCATTACGTG+CGG - Chr2:51879597-51879616 MsG0280009434.01.T01:intron 45.0%
!! CATATTACCTCGGTTCGGAT+TGG - Chr2:51883182-51883201 MsG0280009434.01.T01:CDS 45.0%
!! TTGGTGGTGTTAGTTATGGG+TGG - Chr2:51877988-51878007 MsG0280009434.01.T01:intron 45.0%
!! CAATAAAAATAATAAATAAA+TGG + Chr2:51880131-51880150 None:intergenic 5.0%
!!! AAAATTTTCAATATTTTTTT+GGG + Chr2:51877443-51877462 None:intergenic 5.0%
!!! AAATAAATTTTCTATTTAAT+CGG + Chr2:51882973-51882992 None:intergenic 5.0%
!!! TAAAATTTTCAATATTTTTT+TGG + Chr2:51877444-51877463 None:intergenic 5.0%
AACGTGTGGGAGACACTTTG+AGG + Chr2:51878116-51878135 None:intergenic 50.0%
AAGTGCAGCAATGTGCTCAC+CGG + Chr2:51875856-51875875 None:intergenic 50.0%
ACGACATCATCACCCCAAGT+TGG + Chr2:51881687-51881706 None:intergenic 50.0%
AGCTCCGGCAATGTTGAATC+CGG + Chr2:51878356-51878375 None:intergenic 50.0%
CCACACACCCAACAGAATGA+TGG + Chr2:51881989-51882008 None:intergenic 50.0%
CCATCATTCTGTTGGGTGTG+TGG - Chr2:51881986-51882005 MsG0280009434.01.T01:intron 50.0%
CCTACCTCAAAAGCCGTACA+TGG - Chr2:51881630-51881649 MsG0280009434.01.T01:intron 50.0%
CGCACTTGATGAAGCCAATG+AGG - Chr2:51883317-51883336 MsG0280009434.01.T01:CDS 50.0%
CGGAGAGATGAGGAATCACA+CGG - Chr2:51878232-51878251 MsG0280009434.01.T01:intron 50.0%
CGTGTGATTCCTCATCTCTC+CGG + Chr2:51878234-51878253 None:intergenic 50.0%
GGTCTATGGAGAACTGGAAC+CGG - Chr2:51881481-51881500 MsG0280009434.01.T01:intron 50.0%
GTGGGTTCGATGTGCCAATT+TGG + Chr2:51883823-51883842 None:intergenic 50.0%
GTTGAATCCAATCCGAACCG+AGG + Chr2:51883192-51883211 None:intergenic 50.0%
GTTGCCGGATTCAACATTGC+CGG - Chr2:51878349-51878368 MsG0280009434.01.T01:CDS 50.0%
TGAGATGCTCAAGGAAGCGA+TGG - Chr2:51881912-51881931 MsG0280009434.01.T01:intron 50.0%
TGCAGCGATGATTGTTACGG+TGG - Chr2:51878397-51878416 MsG0280009434.01.T01:CDS 50.0%
TGGAAGTTCCGCCTTAATGG+CGG - Chr2:51882196-51882215 MsG0280009434.01.T01:intron 50.0%
TGGGTACGCATGAATTCACG+TGG + Chr2:51880225-51880244 None:intergenic 50.0%
TGTCAACACTCCAGCTCCAT+TGG - Chr2:51882161-51882180 MsG0280009434.01.T01:intron 50.0%
TTAATGGCGGTCAGCCATTG+CGG - Chr2:51882209-51882228 MsG0280009434.01.T01:intron 50.0%
! ACCAGTATGCTGGTTGTGAG+GGG - Chr2:51882266-51882285 MsG0280009434.01.T01:intron 50.0%
! CACCAGTATGCTGGTTGTGA+GGG - Chr2:51882265-51882284 MsG0280009434.01.T01:intron 50.0%
! CATTTTGTGGCAGAGACGGA+GGG - Chr2:51878206-51878225 MsG0280009434.01.T01:intron 50.0%
! GCTGTTGGTCTATGGAGAAC+TGG - Chr2:51881475-51881494 MsG0280009434.01.T01:intron 50.0%
! GGGTCTTATAATAAGGGCGG+AGG - Chr2:51880609-51880628 MsG0280009434.01.T01:intron 50.0%
! GTGGTGTTAGTTATGGGTGG+TGG - Chr2:51877991-51878010 MsG0280009434.01.T01:intron 50.0%
! TACTACTTGGGTGGCTTTGC+TGG - Chr2:51875823-51875842 MsG0280009434.01.T01:three_prime_UTR 50.0%
! TTTGTGTTGGTACGCGGTAC+AGG - Chr2:51879781-51879800 MsG0280009434.01.T01:intron 50.0%
!! AGCTGGAGTGTTGACAATGC+AGG + Chr2:51882157-51882176 None:intergenic 50.0%
!!! CCATGTACGGCTTTTGAGGT+AGG + Chr2:51881633-51881652 None:intergenic 50.0%
AACACCGCACTAGCAAGCTC+CGG + Chr2:51878371-51878390 None:intergenic 55.0%
AACCAGCATACTGGTGGCAC+TGG + Chr2:51882261-51882280 None:intergenic 55.0%
ACCAGCATACTGGTGGCACT+GGG + Chr2:51882260-51882279 None:intergenic 55.0%
AGACATCAACTCCCCCTAGC+TGG - Chr2:51881347-51881366 MsG0280009434.01.T01:intron 55.0%
AGTGCAGCAATGTGCTCACC+GGG + Chr2:51875855-51875874 None:intergenic 55.0%
ATGATCTTTGTCACGCCGCC+GGG + Chr2:51878269-51878288 None:intergenic 55.0%
ATGGCTGACCGCCATTAAGG+CGG + Chr2:51882207-51882226 None:intergenic 55.0%
ATGGGAGCAACAACAGCAGC+AGG + Chr2:51879182-51879201 None:intergenic 55.0%
CACACGGTGTAGATCCAACC+CGG - Chr2:51878248-51878267 MsG0280009434.01.T01:intron 55.0%
CATGATCTTTGTCACGCCGC+CGG + Chr2:51878270-51878289 None:intergenic 55.0%
CCTCACAACCAGCATACTGG+TGG + Chr2:51882267-51882286 None:intergenic 55.0%
CCTCAGCACCTTCTTTGTGC+TGG - Chr2:51877274-51877293 MsG0280009434.01.T01:intron 55.0%
CCTCCGTCTCTGCCACAAAA+TGG + Chr2:51878208-51878227 None:intergenic 55.0%
GATGGAGGTCTTGGATGACG+AGG - Chr2:51876622-51876641 MsG0280009434.01.T01:intron 55.0%
GCAATGGCTGACCGCCATTA+AGG + Chr2:51882210-51882229 None:intergenic 55.0%
GGTAAGGGGCAGTGAATCGT+GGG - Chr2:51878289-51878308 MsG0280009434.01.T01:intron 55.0%
TCCAACACGCTCAGGTCCAA+TGG + Chr2:51882180-51882199 None:intergenic 55.0%
TCCATTGGACCTGAGCGTGT+TGG - Chr2:51882176-51882195 MsG0280009434.01.T01:intron 55.0%
TGGTAAGGGGCAGTGAATCG+TGG - Chr2:51878288-51878307 MsG0280009434.01.T01:intron 55.0%
! CCACCAGTATGCTGGTTGTG+AGG - Chr2:51882264-51882283 MsG0280009434.01.T01:intron 55.0%
! CCATTTTGTGGCAGAGACGG+AGG - Chr2:51878205-51878224 MsG0280009434.01.T01:intron 55.0%
! GCTTGCTAGTGCGGTGTTTG+TGG - Chr2:51878373-51878392 MsG0280009434.01.T01:CDS 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG + Chr2:51881968-51881987 None:intergenic 55.0%
! TACTTGGGTGGCTTTGCTGG+AGG - Chr2:51875826-51875845 MsG0280009434.01.T01:three_prime_UTR 55.0%
! TGGCTTTGCTGGAGGAATCC+CGG - Chr2:51875834-51875853 MsG0280009434.01.T01:three_prime_UTR 55.0%
!! AGGTGCTGAGGCGACAATGA+AGG + Chr2:51877265-51877284 None:intergenic 55.0%
!! ATTGCCGGAGCTTGCTAGTG+CGG - Chr2:51878364-51878383 MsG0280009434.01.T01:CDS 55.0%
!! CCAGCACAAAGAAGGTGCTG+AGG + Chr2:51877277-51877296 None:intergenic 55.0%
ACCCAGTGCCACCAGTATGC+TGG - Chr2:51882256-51882275 MsG0280009434.01.T01:intron 60.0%
ACGCTCAGGTCCAATGGAGC+TGG + Chr2:51882174-51882193 None:intergenic 60.0%
ACGGTGTAGATCCAACCCGG+CGG - Chr2:51878251-51878270 MsG0280009434.01.T01:intron 60.0%
ATTAGACGCCGATGCGGTGG+AGG - Chr2:51878165-51878184 MsG0280009434.01.T01:intron 60.0%
CAGGGTTCAAGCCCTAGCGA+AGG + Chr2:51876235-51876254 None:intergenic 60.0%
CGGCGGCGTGACAAAGATCA+TGG - Chr2:51878268-51878287 MsG0280009434.01.T01:intron 60.0%
CTTCGCTAGGGCTTGAACCC+TGG - Chr2:51876233-51876252 MsG0280009434.01.T01:CDS 60.0%
GCCCCTCACAACCAGCATAC+TGG + Chr2:51882270-51882289 None:intergenic 60.0%
GCGGAACTTCCAACACGCTC+AGG + Chr2:51882188-51882207 None:intergenic 60.0%
TCCATTAGACGCCGATGCGG+TGG - Chr2:51878162-51878181 MsG0280009434.01.T01:intron 60.0%
TGGTACGCGGTACAGGTTCG+CGG - Chr2:51879788-51879807 MsG0280009434.01.T01:intron 60.0%
! TCCACCGCATCGGCGTCTAA+TGG + Chr2:51878166-51878185 None:intergenic 60.0%
ACGTGCCTCCTCCACCGCAT+CGG + Chr2:51878176-51878195 None:intergenic 65.0%
CGGAGGGAACCGGAGAGATG+AGG - Chr2:51878222-51878241 MsG0280009434.01.T01:intron 65.0%
GTGGCAGAGACGGAGGGAAC+CGG - Chr2:51878212-51878231 MsG0280009434.01.T01:intron 65.0%
TCTTTGTCACGCCGCCGGGT+TGG + Chr2:51878265-51878284 None:intergenic 65.0%
AGACGCCGATGCGGTGGAGG+AGG - Chr2:51878168-51878187 MsG0280009434.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr2 gene 51875775 51884191 51875775 ID=MsG0280009434.01;Name=MsG0280009434.01
Chr2 mRNA 51875775 51884191 51875775 ID=MsG0280009434.01.T01;Parent=MsG0280009434.01;Name=MsG0280009434.01.T01;_AED=0.49;_eAED=0.54;_QI=0|0|0.2|1|1|1|10|321|521
Chr2 exon 51875775 51876272 51875775 ID=MsG0280009434.01.T01:exon:8482;Parent=MsG0280009434.01.T01
Chr2 exon 51878315 51878535 51878315 ID=MsG0280009434.01.T01:exon:8481;Parent=MsG0280009434.01.T01
Chr2 exon 51879699 51879769 51879699 ID=MsG0280009434.01.T01:exon:8480;Parent=MsG0280009434.01.T01
Chr2 exon 51880109 51880163 51880109 ID=MsG0280009434.01.T01:exon:8479;Parent=MsG0280009434.01.T01
Chr2 exon 51880628 51880856 51880628 ID=MsG0280009434.01.T01:exon:8478;Parent=MsG0280009434.01.T01
Chr2 exon 51881503 51881639 51881503 ID=MsG0280009434.01.T01:exon:8477;Parent=MsG0280009434.01.T01
Chr2 exon 51881713 51881825 51881713 ID=MsG0280009434.01.T01:exon:8476;Parent=MsG0280009434.01.T01
Chr2 exon 51882817 51882952 51882817 ID=MsG0280009434.01.T01:exon:8475;Parent=MsG0280009434.01.T01
Chr2 exon 51883156 51883449 51883156 ID=MsG0280009434.01.T01:exon:8474;Parent=MsG0280009434.01.T01
Chr2 exon 51884059 51884191 51884059 ID=MsG0280009434.01.T01:exon:8473;Parent=MsG0280009434.01.T01
Chr2 CDS 51884059 51884191 51884059 ID=MsG0280009434.01.T01:cds;Parent=MsG0280009434.01.T01
Chr2 CDS 51883156 51883449 51883156 ID=MsG0280009434.01.T01:cds;Parent=MsG0280009434.01.T01
Chr2 CDS 51882817 51882952 51882817 ID=MsG0280009434.01.T01:cds;Parent=MsG0280009434.01.T01
Chr2 CDS 51881713 51881825 51881713 ID=MsG0280009434.01.T01:cds;Parent=MsG0280009434.01.T01
Chr2 CDS 51881503 51881639 51881503 ID=MsG0280009434.01.T01:cds;Parent=MsG0280009434.01.T01
Chr2 CDS 51880628 51880856 51880628 ID=MsG0280009434.01.T01:cds;Parent=MsG0280009434.01.T01
Chr2 CDS 51880109 51880163 51880109 ID=MsG0280009434.01.T01:cds;Parent=MsG0280009434.01.T01
Chr2 CDS 51879699 51879769 51879699 ID=MsG0280009434.01.T01:cds;Parent=MsG0280009434.01.T01
Chr2 CDS 51878315 51878535 51878315 ID=MsG0280009434.01.T01:cds;Parent=MsG0280009434.01.T01
Chr2 CDS 51876096 51876272 51876096 ID=MsG0280009434.01.T01:cds;Parent=MsG0280009434.01.T01
Chr2 three_prime_UTR 51875775 51876095 51875775 ID=MsG0280009434.01.T01:three_prime_utr;Parent=MsG0280009434.01.T01
Gene Sequence

>MsG0280009434.01.T01

ATGCAAGACAAGGATCAAGAGCAATTCAAAGTTTACAAGCAGCTACTTTACTACTTGGGTGGCTTTGCTGGAGGAATCCCGGTGAGCACATTGCTGCACTTTATTAGGTATAGCTCTGCTAGACTTTGCTTTAGTTGTCGTACCTTATTCCAAGCCTCTGCCTATGTTTCTAACCTTATTCATCATTGTATTCCAGTTTTTGTATTGAGAGACTATGCAAGAGAAACTCTTTCATTGAGATGGAGGTCTTGGATGACGAGGTATTACATGGATCGCTACTTGAAGGATCAGACTTCTATAAAATTCAATCACACAATTATTGATAATCCAGACCAGCGAATTGTTGATGATCTAAGTTCTTTCACCGGAACAGCCCTTTCTTTCTCTTTGGCACTCTTTAATGCTGCCATAGACTTGATCTCATTCAGGGCTGGTGACTCTAAATTTCTTGCAAGAGAAAAGGAAGCAGACTTTCGTTATGGACTTGTACGGGTTCGGGAAAATGCTGAGTCAATTGCTTTCTATGGTGGTGAAGAGAGTGAGATGCAACTTCTTCTGCAGCGTCGTGTGTTAGAACTTTCATTTCCATTAGACGCCGATGCGGTGGAGGAGGCACGTGAACGTTTTCCATTTTGTGGCAGAGACGGAGGGAACCGGAGAGATGAGGAATCACACGTTAGAGATTTGTGGAGATTTCGGTTGCCGGATTCAACATTGCCGGAGCTTGCTAGTGCGGTGTTTGTGGATGCAGCGATGATTGTTACGGTGGTGATAGTAATTGGTGATGATAGACTTGTGCTTGTGATGATGATGCAATTGCTGATTTCTTCTAGAAATCTGGAGTTCTTCACCAATGGTTACCGCTATGTCATTCAAGTTCTTCCTGCTGCTGTTGTTGCTCCCATGTATTTCTCTGGAAAAATCGAGTTTGGTGTCATCAATCAGTCAGTCTCTGCTTTTAATCACATCCTTGGTGACTTTTCTCTCATTGTGTACCAGTTTCAAGCTATAAGTGCTTTTTCTGCTGTCATTAATCGGTTAGGTTCGCGGTATGTGACATGTGAAAAATTCGGTACGTATAGGGGTAAAGAGCTTCGGTGTGGTTCGGCAGTTTTACGAATTCCACGTGAATTCATGCGTACCCAATATGCTGAAGTACCCAAATTCGACAACAGTACCAGTGGAAGTGCAAAACATCTTATTAAGGTTATGGCTGTTGGTCTATGGAGAACTGGAACCGGAAAGATCATATACTATGTAAAAGGCGGGGAAGACGCTGAGAAATCCATTAGTTCAGATGTGAATACTCCTCGTGATATATCTGAAGATCGTGGGAAATCCATCAGCAGAAAATCCGGAATCTTTTTCCTACCTCAAAAGCCGTACATGGTTTATTTGTACGAAAAGATTGCAGCAGCGGGCATAACATACATTAGTGTTGGCCATCGGTCAACCTTATGCAACTTCCATGACAGAATCCTACGCATATCTACAACCGATTCAAACAATGAACAGCCAAATTGGCACATCGAACCCACTAGACGTGAATCCTCTTTAAAGGTTTAG

Protein sequence

>MsG0280009434.01.T01

MQDKDQEQFKVYKQLLYYLGGFAGGIPVSTLLHFIRYSSARLCFSCRTLFQASAYVSNLIHHCIPVFVLRDYARETLSLRWRSWMTRYYMDRYLKDQTSIKFNHTIIDNPDQRIVDDLSSFTGTALSFSLALFNAAIDLISFRAGDSKFLAREKEADFRYGLVRVRENAESIAFYGGEESEMQLLLQRRVLELSFPLDADAVEEARERFPFCGRDGGNRRDEESHVRDLWRFRLPDSTLPELASAVFVDAAMIVTVVIVIGDDRLVLVMMMQLLISSRNLEFFTNGYRYVIQVLPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAVINRLGSRYVTCEKFGTYRGKELRCGSAVLRIPREFMRTQYAEVPKFDNSTSGSAKHLIKVMAVGLWRTGTGKIIYYVKGGEDAEKSISSDVNTPRDISEDRGKSISRKSGIFFLPQKPYMVYLYEKIAAAGITYISVGHRSTLCNFHDRILRISTTDSNNEQPNWHIEPTRRESSLKV*